View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7577_2D_low_12 (Length: 722)

Name: NF7577_2D_low_12
Description: NF7577_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7577_2D_low_12
NF7577_2D_low_12
[»] scaffold0169 (1 HSPs)
scaffold0169 (123-470)||(2612-2959)
[»] chr8 (56 HSPs)
chr8 (123-474)||(758811-759164)
chr8 (2-114)||(2968104-2968216)
chr8 (2-114)||(17876004-17876116)
chr8 (2-114)||(35482936-35483048)
chr8 (2-114)||(27912332-27912444)
chr8 (2-114)||(27958751-27958863)
chr8 (2-114)||(30904360-30904472)
chr8 (2-114)||(10682060-10682171)
chr8 (2-114)||(14577098-14577212)
chr8 (12-114)||(35482701-35482803)
chr8 (12-110)||(17875771-17875869)
chr8 (2-114)||(3691820-3691932)
chr8 (12-113)||(30904605-30904705)
chr8 (12-114)||(2967869-2967971)
chr8 (17-113)||(44379522-44379618)
chr8 (12-114)||(27912094-27912197)
chr8 (12-114)||(27958513-27958616)
chr8 (2-113)||(38464872-38464982)
chr8 (2-113)||(13327262-13327374)
chr8 (4-100)||(44379763-44379859)
chr8 (12-111)||(17844126-17844224)
chr8 (17-114)||(3691581-3691679)
chr8 (12-109)||(10682304-10682402)
chr8 (56-114)||(20178370-20178428)
chr8 (56-114)||(20223098-20223156)
chr8 (2-113)||(20223339-20223452)
chr8 (55-113)||(30928600-30928658)
chr8 (2-112)||(42123703-42123812)
chr8 (17-114)||(13327512-13327611)
chr8 (17-114)||(23792830-23792926)
chr8 (2-111)||(30928315-30928425)
chr8 (12-114)||(27523199-27523301)
chr8 (17-101)||(4128753-4128837)
chr8 (2-110)||(4128975-4129085)
chr8 (2-114)||(7899998-7900109)
chr8 (301-432)||(14714909-14715041)
chr8 (55-113)||(21660983-21661041)
chr8 (55-113)||(30253882-30253940)
chr8 (12-113)||(38464641-38464741)
chr8 (55-98)||(30463929-30463972)
chr8 (55-98)||(34213400-34213443)
chr8 (55-113)||(28828472-28828530)
chr8 (55-111)||(13795516-13795572)
chr8 (55-111)||(37727201-37727257)
chr8 (55-114)||(148292-148351)
chr8 (55-114)||(21660725-21660784)
chr8 (56-111)||(26938441-26938496)
chr8 (55-98)||(27712779-27712822)
chr8 (55-114)||(33279194-33279253)
chr8 (55-94)||(34632244-34632283)
chr8 (55-114)||(42123992-42124051)
chr8 (55-113)||(10925358-10925416)
chr8 (55-113)||(27713020-27713078)
chr8 (55-113)||(34199091-34199149)
chr8 (55-112)||(29596403-29596460)
chr8 (57-114)||(39198614-39198671)
[»] chr6 (32 HSPs)
chr6 (2-114)||(23068695-23068807)
chr6 (2-114)||(33595554-33595666)
chr6 (2-114)||(4243157-4243269)
chr6 (2-113)||(6755151-6755262)
chr6 (2-112)||(3218152-3218262)
chr6 (12-114)||(3218385-3218487)
chr6 (12-113)||(3922783-3922884)
chr6 (2-114)||(14763540-14763654)
chr6 (18-114)||(3922538-3922634)
chr6 (12-114)||(4242922-4243024)
chr6 (12-112)||(33595320-33595420)
chr6 (12-112)||(14763319-14763419)
chr6 (12-114)||(23068942-23069042)
chr6 (2-43)||(10810047-10810088)
chr6 (55-111)||(14655078-14655134)
chr6 (55-114)||(10810263-10810322)
chr6 (55-113)||(28852188-28852246)
chr6 (12-85)||(6754946-6755018)
chr6 (350-426)||(15633800-15633876)
chr6 (55-114)||(2316745-2316804)
chr6 (55-114)||(9899194-9899253)
chr6 (55-114)||(9899451-9899510)
chr6 (55-98)||(13178479-13178522)
chr6 (55-98)||(22569019-22569062)
chr6 (55-114)||(24896429-24896488)
chr6 (55-110)||(30121584-30121639)
chr6 (55-98)||(32557393-32557436)
chr6 (56-114)||(1925408-1925466)
chr6 (55-113)||(10026140-10026198)
chr6 (56-114)||(10027124-10027182)
chr6 (56-114)||(21926063-21926121)
chr6 (154-212)||(24176096-24176156)
[»] chr4 (70 HSPs)
chr4 (2-114)||(13294837-13294949)
chr4 (2-114)||(49621672-49621784)
chr4 (2-113)||(23163281-23163392)
chr4 (2-110)||(33369746-33369854)
chr4 (1-110)||(50161118-50161229)
chr4 (12-114)||(23163524-23163626)
chr4 (2-112)||(46143273-46143383)
chr4 (12-114)||(49621438-49621540)
chr4 (5-114)||(20930974-20931083)
chr4 (12-113)||(26202522-26202623)
chr4 (12-113)||(33692262-33692363)
chr4 (2-113)||(9525805-9525919)
chr4 (2-114)||(42856803-42856914)
chr4 (2-114)||(55742842-55742954)
chr4 (2-114)||(33692497-33692608)
chr4 (12-111)||(50161361-50161460)
chr4 (12-113)||(28458766-28458867)
chr4 (17-113)||(42857051-42857147)
chr4 (2-114)||(52690095-52690206)
chr4 (12-114)||(9526053-9526155)
chr4 (2-111)||(28458523-28458633)
chr4 (12-114)||(48419461-48419563)
chr4 (2-114)||(37872997-37873109)
chr4 (2-114)||(3546723-3546837)
chr4 (12-114)||(21053540-21053642)
chr4 (17-114)||(46143520-46143617)
chr4 (2-114)||(30055443-30055550)
chr4 (12-113)||(37872767-37872870)
chr4 (12-113)||(41689389-41689492)
chr4 (2-113)||(5260427-5260538)
chr4 (12-113)||(21707847-21707948)
chr4 (2-112)||(30799554-30799668)
chr4 (12-114)||(33369508-33369612)
chr4 (12-111)||(3546490-3546590)
chr4 (12-101)||(5260206-5260294)
chr4 (17-114)||(25297679-25297778)
chr4 (2-110)||(41689626-41689734)
chr4 (12-113)||(55140198-55140298)
chr4 (12-114)||(20931221-20931324)
chr4 (12-101)||(13294614-13294704)
chr4 (55-113)||(52690385-52690443)
chr4 (2-99)||(23549473-23549570)
chr4 (2-110)||(25297915-25298023)
chr4 (55-110)||(30799295-30799350)
chr4 (59-113)||(55742621-55742675)
chr4 (56-113)||(30055208-30055265)
chr4 (303-432)||(37531594-37531723)
chr4 (17-113)||(2685985-2686077)
chr4 (2-82)||(21053329-21053409)
chr4 (2-111)||(21707605-21707713)
chr4 (2-112)||(55140432-55140541)
chr4 (55-114)||(32488583-32488642)
chr4 (301-432)||(50158506-50158637)
chr4 (55-114)||(23549788-23549847)
chr4 (2-43)||(2686213-2686254)
chr4 (58-98)||(23963107-23963147)
chr4 (2-46)||(48419283-48419327)
chr4 (55-114)||(9902652-9902711)
chr4 (55-114)||(10993624-10993683)
chr4 (55-114)||(20983913-20983972)
chr4 (55-114)||(20984170-20984229)
chr4 (55-114)||(32922323-32922382)
chr4 (156-212)||(42728384-42728442)
chr4 (55-114)||(52654188-52654247)
chr4 (55-113)||(21360457-21360515)
chr4 (55-113)||(45655948-45656006)
chr4 (55-113)||(52538135-52538193)
chr4 (55-113)||(52653931-52653989)
chr4 (57-98)||(9644767-9644808)
chr4 (296-325)||(22192582-22192611)
[»] chr3 (49 HSPs)
chr3 (2-114)||(8851803-8851915)
chr3 (2-114)||(25847679-25847791)
chr3 (2-113)||(37513325-37513436)
chr3 (2-113)||(22316954-22317065)
chr3 (2-113)||(49621213-49621324)
chr3 (2-111)||(11121516-11121626)
chr3 (2-110)||(48433801-48433911)
chr3 (12-114)||(22316719-22316821)
chr3 (2-111)||(22975579-22975688)
chr3 (2-114)||(28829986-28830099)
chr3 (2-110)||(36229997-36230106)
chr3 (2-114)||(49711400-49711511)
chr3 (12-110)||(36229766-36229864)
chr3 (2-114)||(9296382-9296493)
chr3 (12-114)||(37513090-37513192)
chr3 (2-111)||(55009332-55009442)
chr3 (12-114)||(22975344-22975446)
chr3 (12-114)||(25847444-25847546)
chr3 (2-110)||(3612598-3612707)
chr3 (12-112)||(48434046-48434147)
chr3 (12-113)||(28829753-28829853)
chr3 (12-114)||(8852049-8852152)
chr3 (10-113)||(44506286-44506389)
chr3 (12-114)||(49620977-49621079)
chr3 (17-110)||(44506049-44506142)
chr3 (12-95)||(49984955-49985038)
chr3 (12-113)||(23043433-23043535)
chr3 (55-113)||(33491692-33491750)
chr3 (12-90)||(55009121-55009198)
chr3 (2-110)||(23043186-23043298)
chr3 (12-114)||(17574372-17574473)
chr3 (56-112)||(49711687-49711743)
chr3 (55-114)||(33491601-33491660)
chr3 (56-114)||(11121282-11121340)
chr3 (2-99)||(49984725-49984822)
chr3 (55-111)||(10687880-10687936)
chr3 (55-114)||(2862700-2862759)
chr3 (55-114)||(41944132-41944191)
chr3 (55-113)||(39930633-39930691)
chr3 (55-110)||(1342180-1342235)
chr3 (158-209)||(29195980-29196031)
chr3 (55-114)||(31574509-31574568)
chr3 (55-114)||(50711251-50711310)
chr3 (55-113)||(11220992-11221050)
chr3 (55-113)||(14463379-14463437)
chr3 (55-113)||(20209150-20209208)
chr3 (55-113)||(44664621-44664679)
chr3 (8-42)||(45278482-45278516)
chr3 (55-113)||(51000641-51000699)
[»] chr5 (49 HSPs)
chr5 (2-113)||(35362984-35363095)
chr5 (2-114)||(32936205-32936317)
chr5 (2-113)||(18485659-18485770)
chr5 (1-113)||(30370511-30370623)
chr5 (5-113)||(40834173-40834281)
chr5 (2-114)||(2094574-2094686)
chr5 (2-113)||(7145773-7145884)
chr5 (12-114)||(40833935-40834037)
chr5 (12-113)||(32936450-32936551)
chr5 (2-114)||(13600443-13600557)
chr5 (12-113)||(20769712-20769813)
chr5 (12-114)||(35363233-35363336)
chr5 (2-111)||(20769946-20770056)
chr5 (12-113)||(2094817-2094918)
chr5 (17-114)||(13600695-13600792)
chr5 (17-113)||(19558122-19558218)
chr5 (2-114)||(25363250-25363362)
chr5 (12-113)||(30370756-30370856)
chr5 (12-114)||(18485904-18486006)
chr5 (2-110)||(3539600-3539709)
chr5 (17-114)||(15179039-15179136)
chr5 (17-114)||(35362167-35362264)
chr5 (2-113)||(15178789-15178900)
chr5 (12-114)||(7145532-7145639)
chr5 (55-114)||(20339155-20339214)
chr5 (55-114)||(32994442-32994501)
chr5 (12-113)||(27843023-27843124)
chr5 (62-114)||(37093738-37093790)
chr5 (12-114)||(3539841-3539942)
chr5 (2-110)||(132048-132159)
chr5 (2-110)||(35361922-35362029)
chr5 (17-113)||(25363016-25363111)
chr5 (17-114)||(132298-132393)
chr5 (56-114)||(32458075-32458133)
chr5 (2-111)||(32994164-32994270)
chr5 (314-423)||(24541419-24541527)
chr5 (123-209)||(24541363-24541449)
chr5 (329-431)||(38015340-38015442)
chr5 (55-114)||(1643538-1643597)
chr5 (55-98)||(2467074-2467117)
chr5 (314-365)||(9012263-9012314)
chr5 (55-114)||(16736800-16736859)
chr5 (55-98)||(24858418-24858461)
chr5 (55-114)||(40952066-40952125)
chr5 (55-113)||(2426229-2426287)
chr5 (55-113)||(14871734-14871792)
chr5 (55-113)||(19131126-19131184)
chr5 (55-113)||(33429789-33429847)
chr5 (55-113)||(39589615-39589673)
[»] chr1 (51 HSPs)
chr1 (2-113)||(40902327-40902438)
chr1 (2-114)||(17611424-17611536)
chr1 (2-110)||(17985290-17985398)
chr1 (2-113)||(2026954-2027065)
chr1 (2-114)||(7113864-7113976)
chr1 (2-114)||(12115186-12115298)
chr1 (2-110)||(30002214-30002322)
chr1 (12-114)||(2026720-2026822)
chr1 (2-113)||(12139258-12139370)
chr1 (12-114)||(1549326-1549428)
chr1 (5-114)||(30563020-30563130)
chr1 (17-114)||(17611674-17611771)
chr1 (2-113)||(19897176-19897287)
chr1 (2-114)||(4969599-4969711)
chr1 (2-111)||(25779887-25780000)
chr1 (12-111)||(30002454-30002552)
chr1 (12-114)||(30562783-30562884)
chr1 (20-101)||(40902580-40902661)
chr1 (2-114)||(40290014-40290128)
chr1 (12-114)||(12139023-12139125)
chr1 (12-114)||(17985532-17985634)
chr1 (56-110)||(25780177-25780231)
chr1 (12-113)||(7114108-7114208)
chr1 (303-432)||(28961975-28962104)
chr1 (1-114)||(25267382-25267499)
chr1 (55-114)||(19897466-19897525)
chr1 (55-111)||(12114954-12115010)
chr1 (55-114)||(5586486-5586545)
chr1 (55-98)||(26874483-26874526)
chr1 (55-114)||(29233686-29233745)
chr1 (370-432)||(31089937-31090000)
chr1 (55-114)||(35521463-35521522)
chr1 (55-98)||(45315512-45315555)
chr1 (55-97)||(4969380-4969422)
chr1 (55-113)||(34480440-34480498)
chr1 (55-113)||(49564185-49564243)
chr1 (289-431)||(31421019-31421163)
chr1 (2-42)||(9172152-9172192)
chr1 (2-42)||(9180134-9180174)
chr1 (58-113)||(49564599-49564655)
chr1 (55-114)||(5618070-5618129)
chr1 (55-98)||(6489128-6489171)
chr1 (55-114)||(25012646-25012705)
chr1 (55-114)||(34480183-34480242)
chr1 (55-113)||(4695192-4695250)
chr1 (55-113)||(7349770-7349828)
chr1 (56-114)||(8853352-8853410)
chr1 (55-113)||(25267181-25267239)
chr1 (55-113)||(28554190-28554248)
chr1 (55-113)||(31289254-31289312)
chr1 (55-113)||(39672836-39672894)
[»] chr7 (53 HSPs)
chr7 (2-111)||(32523437-32523546)
chr7 (2-114)||(28408476-28408587)
chr7 (2-114)||(8437304-8437416)
chr7 (2-110)||(32178089-32178197)
chr7 (2-114)||(7417747-7417858)
chr7 (2-114)||(19305739-19305854)
chr7 (2-114)||(49114096-49114209)
chr7 (2-110)||(32832468-32832576)
chr7 (8-110)||(2933289-2933391)
chr7 (2-114)||(24986719-24986829)
chr7 (12-114)||(32177854-32177956)
chr7 (12-114)||(49113861-49113963)
chr7 (12-101)||(32523213-32523302)
chr7 (2-114)||(31894490-31894601)
chr7 (12-111)||(28408244-28408343)
chr7 (12-111)||(37453311-37453410)
chr7 (17-114)||(8437554-8437652)
chr7 (12-114)||(19305988-19306090)
chr7 (2-113)||(1511190-1511300)
chr7 (12-113)||(7417511-7417613)
chr7 (17-114)||(2933518-2933615)
chr7 (17-114)||(1511437-1511533)
chr7 (17-114)||(10878624-10878723)
chr7 (2-98)||(45746739-45746835)
chr7 (56-114)||(44307610-44307668)
chr7 (2-113)||(44307851-44307964)
chr7 (17-114)||(31894257-31894352)
chr7 (12-114)||(45746969-45747070)
chr7 (1-46)||(37453145-37453190)
chr7 (12-101)||(32832246-32832335)
chr7 (55-114)||(7172930-7172989)
chr7 (314-364)||(4119569-4119619)
chr7 (2-43)||(10878861-10878902)
chr7 (316-432)||(24708831-24708945)
chr7 (6-92)||(30060425-30060510)
chr7 (55-88)||(37452478-37452511)
chr7 (55-111)||(8869584-8869640)
chr7 (55-114)||(8522323-8522382)
chr7 (55-98)||(10543667-10543710)
chr7 (55-98)||(34287773-34287816)
chr7 (55-114)||(38495170-38495229)
chr7 (55-114)||(41922281-41922340)
chr7 (55-114)||(43575306-43575365)
chr7 (55-114)||(45055321-45055380)
chr7 (55-114)||(45055578-45055637)
chr7 (56-110)||(10878921-10878975)
chr7 (55-113)||(12423845-12423903)
chr7 (55-113)||(21733068-21733126)
chr7 (55-113)||(31283409-31283467)
chr7 (55-113)||(42391296-42391354)
chr7 (55-113)||(44458040-44458098)
chr7 (17-46)||(29226337-29226366)
chr7 (60-113)||(43161650-43161703)
[»] scaffold0029 (2 HSPs)
scaffold0029 (2-114)||(136915-137027)
scaffold0029 (12-114)||(137158-137260)
[»] scaffold0002 (2 HSPs)
scaffold0002 (2-114)||(330196-330308)
scaffold0002 (12-114)||(330439-330541)
[»] chr2 (48 HSPs)
chr2 (2-114)||(27360356-27360468)
chr2 (2-111)||(9319804-9319913)
chr2 (2-114)||(17846242-17846354)
chr2 (2-114)||(18916859-18916971)
chr2 (2-114)||(2318725-2318836)
chr2 (2-113)||(20363970-20364081)
chr2 (12-114)||(9320047-9320149)
chr2 (12-114)||(18916624-18916726)
chr2 (12-114)||(17846007-17846109)
chr2 (2-114)||(601564-601679)
chr2 (2-114)||(4261387-4261502)
chr2 (2-112)||(10109049-10109160)
chr2 (12-110)||(44536429-44536527)
chr2 (12-113)||(10044745-10044846)
chr2 (12-113)||(20364215-20364316)
chr2 (12-110)||(4261156-4261254)
chr2 (1-113)||(10044979-10045092)
chr2 (12-113)||(10108813-10108915)
chr2 (12-101)||(2318505-2318593)
chr2 (17-113)||(30337424-30337520)
chr2 (56-110)||(5547339-5547393)
chr2 (12-114)||(8322429-8322529)
chr2 (56-114)||(27360118-27360176)
chr2 (1-114)||(30337657-30337775)
chr2 (56-113)||(18178377-18178434)
chr2 (546-591)||(20117722-20117767)
chr2 (55-113)||(601327-601386)
chr2 (55-114)||(44536178-44536237)
chr2 (56-114)||(31769781-31769839)
chr2 (2-43)||(5547150-5547191)
chr2 (55-113)||(10714008-10714066)
chr2 (12-110)||(13862496-13862593)
chr2 (55-112)||(33274653-33274710)
chr2 (320-432)||(3395029-3395141)
chr2 (1-41)||(40044361-40044401)
chr2 (55-114)||(1650759-1650818)
chr2 (55-98)||(11723720-11723763)
chr2 (55-114)||(30488336-30488395)
chr2 (55-114)||(40710315-40710374)
chr2 (72-114)||(981780-981822)
chr2 (70-112)||(5547103-5547145)
chr2 (56-114)||(26499421-26499479)
chr2 (55-113)||(26499667-26499725)
chr2 (55-113)||(35412133-35412191)
chr2 (2-32)||(44536265-44536295)
chr2 (55-92)||(2450109-2450146)
chr2 (55-112)||(28789123-28789180)
chr2 (3-40)||(37084880-37084917)
[»] scaffold0311 (1 HSPs)
scaffold0311 (2-114)||(12831-12943)
[»] scaffold0347 (2 HSPs)
scaffold0347 (2-113)||(11940-12049)
scaffold0347 (57-114)||(12223-12280)
[»] scaffold1577 (2 HSPs)
scaffold1577 (2-43)||(943-984)
scaffold1577 (17-110)||(1121-1214)
[»] scaffold0012 (1 HSPs)
scaffold0012 (303-432)||(96248-96377)
[»] scaffold0053 (1 HSPs)
scaffold0053 (2-40)||(15112-15150)
[»] scaffold0114 (1 HSPs)
scaffold0114 (300-345)||(1070-1115)


Alignment Details
Target: scaffold0169 (Bit Score: 128; Significance: 9e-66; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 123 - 470
Target Start/End: Complemental strand, 2959 - 2612
Alignment:
Q  123 tgtcacattattttcaaatgtctaatacatgtgtactttgtgaactcaacataacacatgtattttttcattgttagatcccaccaaggaccaagtgtag 222  Q
    |||||||||||||| ||||||||||||||  |||||||||  |||||||||||||||||| |||||| || |||||||||||||||| ||||||   | |    
T  2959 tgtcacattattttaaaatgtctaatacacatgtactttgacaactcaacataacacatgcatttttccactgttagatcccaccaaagaccaaacatgg 2860  T
Q  223 atgtttttgaagctcagatataaaagttgaatggaagcgaacgacatccaaaaacttatgaatttgagagtatatagcatagtgaattgagggtaatttt 322  Q
    | |||||| ||| ||  ||| |||| ||| ||||||||||||| |||| ||||||||||| ||||| |||||||    |||||   |||  |||||||||    
T  2859 aagtttttaaaggtcgtatagaaaacttgcatggaagcgaacggcatcaaaaaacttatggatttgtgagtataggaaatagtcggttggaggtaatttt 2760  T
Q  323 ataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaac 422  Q
    ||| ||||||  ||||||||  |||||||||||||||||||||    ||||| || |||||||| |||||| | |||||||||||| || |||||| | |    
T  2759 atagatttgtagaaggagtttaagattactagataattatgctacctaaataatacactcattatgaaaatctcacatcaatttaaaatgtctaatcagc 2660  T
Q  423 atgttttttaaggataatgaacatttattttgttgactcaacatatca 470  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  2659 atgttttttaaggataataaacatgtattttgttgactcgacatatca 2612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 123 - 474
Target Start/End: Complemental strand, 759164 - 758811
Alignment:
Q  123 tgtcacattattttcaaatgtctaatacatgtgtactttgtgaactcaacataacacatgtattttttcattgttagatcccaccaaggaccaagtgtag 222  Q
    ||||| |||||||| |||||| |||||||  |||||||||  |||||||||||||||||| |||||| ||||||||||||||||||| ||||||   | |    
T  759164 tgtcatattattttaaaatgtttaatacacatgtactttgacaactcaacataacacatgcatttttccattgttagatcccaccaaagaccaaacatgg 759065  T
Q  223 atgtttttgaagctcagatataaaagttgaatggaagcgaacgacatccaaaaacttatgaatttgagagtatatagcatagtgaattgagggtaatttt 322  Q
    |  ||||| ||| || ||||||||| ||| ||||||||||||| |||| ||||||||||| ||||| |||||||  | ||| | | ||| ||||||||||    
T  759064 aattttttaaaggtcggatataaaacttgcatggaagcgaacggcatcaaaaaacttatggatttgtgagtatagggaataatcagttgcgggtaatttt 758965  T
Q  323 ataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaac 422  Q
    ||| ||||||  ||||||||  |||||||||||||||||||||    ||||| |  |||||||| |||||| | |||||||||||| ||  ||||||| |    
T  758964 atatatttgtagaaggagtttaagattactagataattatgctacctaaataatccactcattatgaaaatctcacatcaatttaaaatgcctaataagc 758865  T
Q  423 atg--ttttttaaggataatgaacatttattttgttgactcaacatatcacatc 474  Q
    |||  |||||||| |||||| ||||| |||||||| ||||| ||||||||||||    
T  758864 atgttttttttaaagataataaacatgtattttgtcgactcgacatatcacatc 758811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 2968104 - 2968216
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  2968104 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 2968203  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  2968204 tgtaattttgcct 2968216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 17876004 - 17876116
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  17876004 gataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 17876103  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  17876104 tgtaattttgcct 17876116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 35482936 - 35483048
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  35482936 gataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 35483035  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  35483036 tgtaattttgcct 35483048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 27912332 - 27912444
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  27912332 gataactatcttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 27912431  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  27912432 tgtaattttgcct 27912444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 27958751 - 27958863
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  27958751 gataactatcttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 27958850  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  27958851 tgtaattttgcct 27958863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 30904472 - 30904360
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||| ||||        |||||||||||||||||||||||||||||||||||||||| ||||||    
T  30904472 gataactatgttgttattttataacataaaggactaaatcctgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaattg 30904373  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  30904372 tgtaattttgcct 30904360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 10682171 - 10682060
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  10682171 gataactatgttgttattttataacataaaggactaaatcgtgactaaaaaa-gataaagaacgaaagtgttacctaaaataaagttaagggattaattg 10682073  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  10682072 tgtaattttgcct 10682060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 14577098 - 14577212
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaat 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||    
T  14577098 gataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaat 14577197  T
Q  100 tgcgtaattttgcct 114  Q
    || ||||||||||||    
T  14577198 tgtgtaattttgcct 14577212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 35482803 - 35482701
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35482803 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 35482704  T
Q  112 cct 114  Q
    |||    
T  35482703 cct 35482701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 17875869 - 17875771
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17875869 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 17875771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 3691820 - 3691932
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| |||| |||||| ||||||    
T  3691820 gataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagtgaagggattaattg 3691919  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  3691920 tgtaattttgcct 3691932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 30904605 - 30904705
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30904605 ttgtcattttataacataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 30904703  T
Q  112 cc 113  Q
    ||    
T  30904704 cc 30904705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 2967971 - 2967869
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||||| |  ||||||    
T  2967971 ttgtcattttataacataaaggactaaatcgtgacaaaaataagataaatgacgaaagtgttacctaaaataaagttaagggactaattgtgctattttg 2967872  T
Q  112 cct 114  Q
    |||    
T  2967871 cct 2967869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 44379618 - 44379522
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    ||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  44379618 attttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggattaattgtgtaattttgcc 44379522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 27912197 - 27912094
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||    
T  27912197 ttgtaattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctatttt 27912098  T
Q  111 gcct 114  Q
    ||||    
T  27912097 gcct 27912094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 27958616 - 27958513
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||    
T  27958616 ttgtaattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctatttt 27958517  T
Q  111 gcct 114  Q
    ||||    
T  27958516 gcct 27958513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 38464872 - 38464982
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||||||| |||||||||||||||| |||||||||| |||        |||||||||||||||||||||||||||||||| |||||||  |||||    
T  38464872 gataactatgttgatattttataacataaaagactaaatcgggacaaaaaaaagataaaggacgaaagtgttacctaaaataaag-taagggatgaattg 38464970  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  38464971 tgtaattttgcc 38464982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 13327374 - 13327262
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnnga-taaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||         | ||||||| |||||||||||||||||| ||||||||| |||||||    
T  13327374 gataactatgttgttattttataacataaatgactaaatcgttacaaaaaaaaaaataaaggatgaaagtgttacctaaaattaagttaaggaactaatt 13327275  T
Q  101 gcgtaattttgcc 113  Q
    | |||||||||||    
T  13327274 gtgtaattttgcc 13327262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 44379763 - 44379859
Alignment:
Q  4 taactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||        ||||||| |||||| ||||||||||||| ||||||||| |||||||    
T  44379763 taactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaagaacgaaaatgttacctaaaattaagttaaggaactaatt 44379859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 17844126 - 17844224
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| |||||||||||||||| |||||||||||||         ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  17844126 ttgtcattttataacataaag-actaaatcgtgacaaaaaataaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttg 17844224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 3691679 - 3691581
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||| ||         |||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||    
T  3691679 attttataacataaaggactaaatcgttacaaaaaaaaagataaaggacgaaagtgttacctaaaattatgttaagggactaattgtgtaattttgcct 3691581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 10682304 - 10682402
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnnga-taaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 109  Q
    |||| ||||||||||||||||||||||||||||||         | ||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  10682304 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaaaataaaggacgaaagtgtttcctaaaataaagttaagggactaattgtgtaattt 10682402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 20178428 - 20178370
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  20178428 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 20178370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 20223156 - 20223098
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  20223156 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 20223098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 20223339 - 20223452
Alignment:
Q  2 gataactatgttgttattttataacata--aaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaat 99  Q
    ||||||||||||||||||||||||||||  ||||||||||| || ||        ||||||| |||||| ||||||||||||| ||||||||||| ||||    
T  20223339 gataactatgttgttattttataacatataaaggactaaattgttacaaaaaaaagataaagaacgaaaatgttacctaaaattaagttaagggattaat 20223438  T
Q  100 tgcgtaattttgcc 113  Q
    || |||||||||||    
T  20223439 tgtgtaattttgcc 20223452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 30928600 - 30928658
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  30928600 gataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 42123812 - 42123703
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||        ||||||||| |||| | ||| ||||||| ||||||||||||||||||    
T  42123812 gataactatgttgttattttataacataaaggactatatcgt-acaaaaaaaagataaaggatgaaaatattatctaaaattaagttaagggactaattg 42123714  T
Q  102 cgtaattttgc 112  Q
     ||||||||||    
T  42123713 tgtaattttgc 42123703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 13327512 - 13327611
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaa--gttaagggactaattgcgtaattttgcct 114  Q
    |||||||| ||||||||| |||||||||||        |||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  13327512 attttatatcataaaggattaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaattaattgttaagggactaattgcgtaattttgcct 13327611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 23792830 - 23792926
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||| ||        |||||||||| ||||||||||||||||| |||||||||||||||||| || |||||||||    
T  23792830 attttataacataaaggactaaatcgttacaaaaaaa-gataaaggacaaaagtgttacctaaaattaagttaagggactaattgtgttattttgcct 23792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 30928425 - 30928315
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnnga-taaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||         | |||||||| ||| ||||||||||||| |||||||||||||||||    
T  30928425 gataactatgttggtattttataacataaaggacaaaatcgttacaaaaaaaataataaaggacaaaaatgttacctaaaattaagttaagggactaatt 30928326  T
Q  101 gcgtaattttg 111  Q
    | |||||||||    
T  30928325 gtgtaattttg 30928315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 27523199 - 27523301
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| |||||||||||||||||||||||||| |||         |||||||| |||||||||| ||||||| ||||||| |||| ||||| |||||||||    
T  27523199 ttgtcattttataacataaaggactaaatcgggacaagaaaaatataaaggatgaaagtgttaactaaaattaagttaaaggacgaattgtgtaattttg 27523298  T
Q  112 cct 114  Q
    |||    
T  27523299 cct 27523301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 4128837 - 4128753
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||| || |||| ||||||||||    
T  4128837 attttataacataaaggactaaatcgttaaaaaaagaagataaaggacgaaagtgttacctaaaattaaattaaaggactaattg 4128753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 4128975 - 4129085
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataa---agttaagggactaa 98  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||        |||||||||| ||| ||||| ||||||| |   ||||||||||||||    
T  4128975 gataactatgttgttattttataacataaaggcctaaatcgttac-aaaaaaagataaaggacaaaaatgttatctaaaattaattagttaagggactaa 4129073  T
Q  99 ttgcgtaatttt 110  Q
    ||| ||||||||    
T  4129074 ttgtgtaatttt 4129085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 7899998 - 7900109
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||         ||||||||||||| |||||  |||||| || |||||| |||||||     
T  7899998 gataacaatgttgttattttataacataaaggactaaatcgttacaaaaaaat-ataaaggacgaaaatgttagataaaattaaattaaggaactaattc 7900096  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  7900097 tgtaattttgcct 7900109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 301 - 432
Target Start/End: Complemental strand, 14715041 - 14714909
Alignment:
Q  301 atagtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcatt-aagaaaattttaca 399  Q
    ||||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | ||||||||      || ||||||| ||||| || ||||| | |||    
T  14715041 atagtgaattgagggtaattttatagatttgttgaaggtgttggagattacttggtaattatgtcaccaaactattagattcattaaaaaaaatgtcaca 14714942  T
Q  400 tcaatttaacatatctaataaacatgtttttta 432  Q
    ||||||||| || |||||||| ||||| |||||    
T  14714941 tcaatttaaaatgtctaataagcatgtatttta 14714909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 21660983 - 21661041
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| |||  |||||||||||||||||||||||||||| || |||||||||||    
T  21660983 gataaaggactaaaccgttacctaaaataaagttaagggactaaatgtgtaattttgcc 21661041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 30253882 - 30253940
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||||||||||||||||||||||||  | |||||||||||    
T  30253882 gataaaggactaaactgttacctaaaataaagttaagggactaaaagtgtaattttgcc 30253940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 38464741 - 38464641
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| |||||||||||||||||||||||||| |||        |||||||||| |||||||||||| || | |||||||||||| | ||| |||||||||    
T  38464741 ttgtcattttataacataaaggactaaatcgggacaaaaaaa-gataaaggacaaaagtgttacctgaatttaagttaagggacgagttgtgtaattttg 38464643  T
Q  112 cc 113  Q
    ||    
T  38464642 cc 38464641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 30463972 - 30463929
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  30463972 gataaaggactaaactgttacctaaaataaagttaagggactaa 30463929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 34213443 - 34213400
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  34213443 gataaaggaccaaactgttacctaaaataaagttaagggactaa 34213400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 28828472 - 28828530
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| | |||||||||||||||||||||||||||  | |||||||||||    
T  28828472 gataaaggactaaattattacctaaaataaagttaagggactaaaagtgtaattttgcc 28828530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 13795572 - 13795516
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||||| ||||||| ||||| ||||||| |||||||||||| ||||| |||||||||    
T  13795572 gataaatgacgaaaatgttagctaaaattaagttaagggacgaattgtgtaattttg 13795516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 37727257 - 37727201
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||  | |||||||||    
T  37727257 gataaaggactaaactgttacctgaaataaagttaagggactaaaagtgtaattttg 37727201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 148351 - 148292
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| ||||||||||||| |||||||||||| ||  | ||||||||||||    
T  148351 gataaaggaccaaattgttacctaaaattaagttaagggaccaaaagtgtaattttgcct 148292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 21660784 - 21660725
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  21660784 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 21660725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 26938441 - 26938496
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||  | |||||||||    
T  26938441 ataaaggactaaattgttacctaaaattaagttaagggactaaaagtgtaattttg 26938496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 27712822 - 27712779
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||    
T  27712822 gataaaggactaaactgttacctaaaataaaattaagggactaa 27712779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 33279194 - 33279253
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  33279194 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 33279253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 34632283 - 34632244
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaaggga 94  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  34632283 gataaaggactaaattgttacctaaaataaagttaaggga 34632244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 42123992 - 42124051
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||| ||||||||||||||||||||| || |||||  | |||||| ||||||||||||    
T  42123992 gataaatgacgaaagtgttacctaaaattaaattaagaaattaattgtgtaattttgcct 42124051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 10925358 - 10925416
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||  ||| || ||||||||||||||||||||||||||  | |||||||||||    
T  10925358 gataaaggattaaattgatacctaaaataaagttaagggactaaaagtgtaattttgcc 10925416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 27713020 - 27713078
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  27713020 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 27713078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 34199091 - 34199149
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| ||||||||||||| ||||||||||||| |  | |||||||||||    
T  34199091 gataaaggaccaaactgttacctaaaattaagttaagggactgaaagtgtaattttgcc 34199149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 29596460 - 29596403
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 112  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||    
T  29596460 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 29596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 39198671 - 39198614
Alignment:
Q  57 taaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  39198671 taaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 39198614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 4e-40; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 23068807 - 23068695
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  23068807 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 23068708  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  23068707 tgtaattttgcct 23068695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 33595554 - 33595666
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  33595554 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 33595653  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  33595654 tgtaattttgcct 33595666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 4243157 - 4243269
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||||||||||||||||||||||||||||||||||    
T  4243157 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattg 4243256  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  4243257 tgtaattttgcct 4243269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 6755151 - 6755262
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||||||||||    
T  6755151 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaattg 6755250  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  6755251 tgtaattttgcc 6755262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 3218262 - 3218152
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  3218262 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattg 3218163  T
Q  102 cgtaattttgc 112  Q
     ||||||||||    
T  3218162 tgtaattttgc 3218152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 3218385 - 3218487
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3218385 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 3218484  T
Q  112 cct 114  Q
    |||    
T  3218485 cct 3218487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 3922783 - 3922884
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3922783 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 3922882  T
Q  112 cc 113  Q
    ||    
T  3922883 cc 3922884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 14763540 - 14763654
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaat 99  Q
    |||||||||||||||||||||||||| ||||||||||||||||||          |||||||||||||||| ||||||||||||||||||||||||||||    
T  14763540 gataactatgttgttattttataacaaaaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtcttacctaaaataaagttaagggactaat 14763639  T
Q  100 tgcgtaattttgcct 114  Q
    || ||||||||||||    
T  14763640 tgtgtaattttgcct 14763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 3922634 - 3922538
Alignment:
Q  18 ttttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3922634 ttttataacataaaggactaattcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 3922538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 4243024 - 4242922
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  4243024 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaaaggactaattgtgtaattttg 4242925  T
Q  112 cct 114  Q
    |||    
T  4242924 cct 4242922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 33595420 - 33595320
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  33595420 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 33595321  T
Q  112 c 112  Q
    |    
T  33595320 c 33595320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 14763419 - 14763319
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||| ||||||        ||||||| |||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  14763419 ttgtcattttataacataaaggactaaaccgtgacaaaaaaaagataaagtacgaaagtgttacctaaaataaagttaagggactgattgtataattttg 14763320  T
Q  112 c 112  Q
    |    
T  14763319 c 14763319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 23068942 - 23069042
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| |||||||||||||||| |||||||||||||        |||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  23068942 ttgtcattttataacataaag-actaaatcgtgacaaaaaaa-gataaatgacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttg 23069039  T
Q  112 cct 114  Q
    |||    
T  23069040 cct 23069042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 10810088 - 10810047
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgt 43  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  10810088 gataactatgttgttattttataacataaatgactaaatcgt 10810047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 14655134 - 14655078
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||||||||| ||| |||||||||||||||||||||||||||||  | |||||||||    
T  14655134 gataaaggaccaaactgttacctaaaataaagttaagggactaaaagtgtaattttg 14655078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 10810263 - 10810322
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| | ||||||||||||||| || |||| |||||||||| ||||||||||||    
T  10810263 gataaaggacaagagtgttacctaaaattaaattaaaggactaattgtgtaattttgcct 10810322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 28852246 - 28852188
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | |||||||||||    
T  28852246 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 28852188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 6755018 - 6754946
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaa 85  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||| ||||| ||||||||||||||    
T  6755018 ttgtcattttataacataaaggactaaatcgtgac-aaaaaaagataaaggacaaaagtattacctaaaataaa 6754946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 350 - 426
Target Start/End: Original strand, 15633800 - 15633876
Alignment:
Q  350 actagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaacatgt 426  Q
    ||||| |||||||||| || |||||||||||||||||| ||||  | ||||||| |||| || ||||||||| ||||    
T  15633800 actaggtaattatgctattaaaatattagactcattaaaaaaaggtcacatcaaattaaaatgtctaataaagatgt 15633876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 2316745 - 2316804
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  2316745 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 2316804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 9899253 - 9899194
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  9899253 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 9899194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 9899451 - 9899510
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  9899451 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 9899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 13178479 - 13178522
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  13178479 gataaaggaccaaaatgttacctaaaattaagttaagggactaa 13178522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 22569019 - 22569062
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  22569019 gataaaggaccaaactgttacctaaaattaagttaagggactaa 22569062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 24896429 - 24896488
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||| ||| ||| |||||||||||||||||||||||||| ||  | ||||||||||||    
T  24896429 gataaatgactaaactgttacctaaaataaagttaagggaccaaaagtgtaattttgcct 24896488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 30121584 - 30121639
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||||||||||||||||||||||||||| || |||| |||| || || ||||||||    
T  30121584 gataaaggacgaaagtgttacctaaaattaatttaaaggacgaaatgtgtaatttt 30121639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 32557393 - 32557436
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  32557393 gataaaggaccaaattgttacctaaaattaagttaagggactaa 32557436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 1925408 - 1925466
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  1925408 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 1925466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 10026198 - 10026140
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| |||  |||||||||||| |||||||||||||| ||  |||||||||||    
T  10026198 gataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 10026140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 10027124 - 10027182
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||| ||| ||||||||||||| |||||||||||||| ||  |||||| |||||    
T  10027124 ataaaggaccaaaatgttacctaaaattaagttaagggactatttatgtaattatgcct 10027182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 21926121 - 21926063
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  21926121 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 21926063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 24176156 - 24176096
Alignment:
Q  154 tgtactttgtgaactcaacataacacatgt--attttttcattgttagatcccaccaagga 212  Q
    |||||||||| ||||||||||||||||| |   |||||||||||  |||||||||||||||    
T  24176156 tgtactttgttaactcaacataacacattttatttttttcattgacagatcccaccaagga 24176096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 4e-40; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 13294837 - 13294949
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  13294837 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 13294936  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  13294937 tgtaattttgcct 13294949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 49621672 - 49621784
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  49621672 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 49621771  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  49621772 tgtaattttgcct 49621784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 23163392 - 23163281
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  23163392 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 23163293  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  23163292 tgtaattttgcc 23163281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 33369746 - 33369854
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  33369746 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaatatagttaagagactaattg 33369845  T
Q  102 cgtaatttt 110  Q
     ||||||||    
T  33369846 tgtaatttt 33369854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 50161229 - 50161118
Alignment:
Q  1 agataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    
T  50161229 agataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaa 50161130  T
Q  99 ttgcgtaatttt 110  Q
    ||| ||||||||    
T  50161129 ttgtgtaatttt 50161118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 23163524 - 23163626
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23163524 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 23163623  T
Q  112 cct 114  Q
    |||    
T  23163624 cct 23163626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 46143383 - 46143273
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||||||||||||||||||||||||||||||||| |||||        |||||||||||||| |||||||||||||||| |||||||||||||||    
T  46143383 gataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaagggactaattg 46143284  T
Q  102 cgtaattttgc 112  Q
     ||||||||||    
T  46143283 tgtaattttgc 46143273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 49621540 - 49621438
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49621540 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 49621441  T
Q  112 cct 114  Q
    |||    
T  49621440 cct 49621438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 20931083 - 20930974
Alignment:
Q  5 aactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgt 104  Q
    |||||| |||||||||||||||||||| |||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20931083 aactatattgttattttataacataaaagactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgt 20930984  T
Q  105 aattttgcct 114  Q
    ||||||||||    
T  20930983 aattttgcct 20930974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 26202623 - 26202522
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26202623 ttgtcattttataacataaaggactaaatcgtgacaagaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 26202524  T
Q  112 cc 113  Q
    ||    
T  26202523 cc 26202522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 33692363 - 33692262
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  33692363 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 33692264  T
Q  112 cc 113  Q
    ||    
T  33692263 cc 33692262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 9525919 - 9525805
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaa---ggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||||||||||||||||||||||| ||||||||||||||        ||||||   ||||||||||||||||||||||||||||||||||||||    
T  9525919 gataactatgttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaaaaggacgaaagtgttacctaaaataaagttaagggactaa 9525820  T
Q  99 ttgcgtaattttgcc 113  Q
    ||| |||||||||||    
T  9525819 ttgtgtaattttgcc 9525805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 42856914 - 42856803
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||||||    
T  42856914 gataactatgttgttattttataacataaaagactaaatcgtgaccaaaaaaa-ataaaggacgaaagtgttacctaaaataaaattaagggactaattg 42856816  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  42856815 tgtaattttgcct 42856803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 55742842 - 55742954
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||         ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  55742842 gataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttatctaaaataaagttaaaggactaattg 55742941  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  55742942 tgtaattttgcct 55742954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 33692497 - 33692608
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||        |||||| |||||||||||||||||||||||| |||||||||||||||    
T  33692497 gataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaa-gataaatgacgaaagtgttacctaaaataaaattaagggactaattg 33692595  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  33692596 tgtaattttgcct 33692608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 50161361 - 50161460
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50161361 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 50161460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 28458766 - 28458867
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  28458766 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagggactaattgtgtaattttg 28458865  T
Q  112 cc 113  Q
    ||    
T  28458866 cc 28458867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 42857051 - 42857147
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  42857051 attttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaattttgcc 42857147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 52690206 - 52690095
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||        |||||||||||||| | |||||||||||||||||||| |||||||||    
T  52690206 gataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaa-gataaaggacgaaaatattacctaaaataaagttaagcgactaattg 52690108  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  52690107 tgtaattttgcct 52690095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 9526053 - 9526155
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||    
T  9526053 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgttattttg 9526152  T
Q  112 cct 114  Q
    |||    
T  9526153 cct 9526155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 28458633 - 28458523
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||| |||||||||||||||    
T  28458633 gataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacggaagtgttacctaaaataatgttaagggactaatt 28458534  T
Q  101 gcgtaattttg 111  Q
    | |||||||||    
T  28458533 gtgtaattttg 28458523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 48419461 - 48419563
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||    
T  48419461 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgttattttg 48419560  T
Q  112 cct 114  Q
    |||    
T  48419561 cct 48419563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 37872997 - 37873109
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||| | ||||||||||||||||||||||||     
T  37872997 gataactttgttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaggacgaaagtgttgcataaaataaagttaagggactaatta 37873096  T
Q  102 cgtaattttgcct 114  Q
      |||||||||||    
T  37873097 tataattttgcct 37873109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 3546723 - 3546837
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaat 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||          |||||| ||||||||||||||||||||||||||||||  ||||||    
T  3546723 gataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaaaagataaatgacgaaagtgttacctaaaataaagttaagaaactaat 3546822  T
Q  100 tgcgtaattttgcct 114  Q
    || ||||||||||||    
T  3546823 tgtgtaattttgcct 3546837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 21053540 - 21053642
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||| ||||||||||||||||| ||        ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  21053540 ttgtcattttataatataaaggactaaatcgtaacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 21053639  T
Q  112 cct 114  Q
    |||    
T  21053640 cct 21053642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 46143520 - 46143617
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  46143520 attttataatataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaggcactaattgtgtaattttgcct 46143617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 30055443 - 30055550
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||||||||||||||||||||||||||||||||| || ||         | ||||||||||| ||||||||||||| ||||||||||||||||||    
T  30055443 gataactatgttgttattttataacataaaggactaaattgttacaaaa-----aaaaaggacgaaaatgttacctaaaattaagttaagggactaattg 30055537  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  30055538 tgtaattttgcct 30055550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 37872870 - 37872767
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 109  Q
    |||| ||||||||||||||||||||||||||||||          |||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  37872870 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattt 37872771  T
Q  110 tgcc 113  Q
    ||||    
T  37872770 tgcc 37872767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 41689492 - 41689389
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 109  Q
    |||| |||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41689492 ttgtcattttataacataaaggactaaatcgtgaaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattt 41689393  T
Q  110 tgcc 113  Q
    ||||    
T  41689392 tgcc 41689389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 5260427 - 5260538
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||| || |||||| ||||        |||||||||||||| |||||||||||||||||||||  ||||||||     
T  5260427 gataactatgttgttattttataacataaatgattaaatcatgacaaaacaaagataaaggacgaaaatgttacctaaaataaagttaaaagactaatta 5260526  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  5260527 tgtaattttgcc 5260538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 21707847 - 21707948
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| |||| |||||||||||||||||||||||||        ||||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  21707847 ttgtcatttaataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtattacctaaaataaagttaagagactaattgtgtaattttg 21707946  T
Q  112 cc 113  Q
    ||    
T  21707947 cc 21707948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 30799554 - 30799668
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn----gataaaggacgaaagtgttacctaaaataaagttaagggacta 97  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||            |||||||||||||| ||||||||||||| ||||||||||||||    
T  30799554 gataactatgttgttattttataacataaaagactaaatcgttacaaaaaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggacta 30799653  T
Q  98 attgcgtaattttgc 112  Q
    |||| ||||||||||    
T  30799654 attgtgtaattttgc 30799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 33369612 - 33369508
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 109  Q
    |||| ||||||||||||||| ||||||||||||||          || |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33369612 ttgtcattttataacataaatgactaaatcgtgacaaaaaaaaaagaaaaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattt 33369513  T
Q  110 tgcct 114  Q
    |||||    
T  33369512 tgcct 33369508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 3546590 - 3546490
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||||||         |||||||||| |||||||||||||||||||||||||||||||||||  ||||||||    
T  3546590 ttgtcattttataacataaaggactaaatcgtgaccaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattatgtaatttt 3546491  T
Q  111 g 111  Q
    |    
T  3546490 g 3546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 5260294 - 5260206
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||||||||||    
T  5260294 ttgtcattttataacataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaaatgttacctaaaataaagttaagggactaattg 5260206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 25297778 - 25297679
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||| ||          |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  25297778 attttataacataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 25297679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 41689626 - 41689734
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||| |||| || ||        |||||||||||||| | |||| ||||||||||||||||| |||||||    
T  41689626 gataactatgttgttattttataacataaaggacaaaattgtaacaaaaaaaagataaaggacgaaaatattacttaaaataaagttaaggggctaattg 41689725  T
Q  102 cgtaatttt 110  Q
     ||||||||    
T  41689726 tgtaatttt 41689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 55140298 - 55140198
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||| ||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||| |||| | |||||||||    
T  55140298 ttgtcattttataaaataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagggattaatcgtgtaattttg 55140200  T
Q  112 cc 113  Q
    ||    
T  55140199 cc 55140198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 20931221 - 20931324
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||||||         |||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||    
T  20931221 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttatctaaaataaagttaaggaactaatcgtgtaatttt 20931320  T
Q  111 gcct 114  Q
    ||||    
T  20931321 gcct 20931324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 13294704 - 13294614
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||| |||||||||||||||||||||||||    
T  13294704 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattg 13294614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 52690385 - 52690443
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  52690385 gataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgcc 52690443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 23549570 - 23549473
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaat 99  Q
    |||||||| ||||||||||||||||||| ||||||||||||| ||        |||||| ||| ||||| ||||||||||||||||||||||||||||    
T  23549570 gataactacgttgttattttataacatagaggactaaatcgtaacaaaaaaaagataaaagactaaagtattacctaaaataaagttaagggactaat 23549473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 25297915 - 25298023
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||||||||||||||||||||||||| | |||||||| ||         |||||||| |||| |||||| |||||| ||||||||||||||||||    
T  25297915 gataactatgttgttattttataacataaagaattaaatcgttacaaaaaaaaaataaaggatgaaaatgttacttaaaattaagttaagggactaattg 25298014  T
Q  102 cgtaatttt 110  Q
     ||||||||    
T  25298015 tgtaatttt 25298023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 30799350 - 30799295
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  30799350 gataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 30799295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 55742675 - 55742621
Alignment:
Q  59 aaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  55742675 aaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcc 55742621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 30055265 - 30055208
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||    
T  30055265 ataaaggacaaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30055208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 303 - 432
Target Start/End: Original strand, 37531594 - 37531723
Alignment:
Q  303 agtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatca 402  Q
    ||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | ||||||||      || ||||||| ||||||| ||||| | ||||||    
T  37531594 agtgaattgagggtaattttatagatttgttgaaggtgttggagattactgggtaattatgtcaccaaactattagattcattaaaaaaatgtcacatca 37531693  T
Q  403 atttaacatatctaataaacatgtttttta 432  Q
    |||||| || |||||||| ||||| |||||    
T  37531694 atttaaaatgtctaataagcatgtatttta 37531723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 2686077 - 2685985
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    ||||||||||||||||||||||||||| ||         | ||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  2686077 attttataacataaaggactaaatcgttacaaaaa----aaaaaagacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 2685985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 21053409 - 21053329
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaat 82  Q
    ||||||| |||||||||||||||||||||||||||||||||||||        |||||||||| ||| |||||||||||||    
T  21053409 gataactgtgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggaccaaaatgttacctaaaat 21053329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 21707713 - 21707605
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||        ||||||  |||||| | |||| ||||||||||||||| ||||||||     
T  21707713 gataactatgttgttattttataacataaatgactaaatcgtgac-aaaaaaagataaaaaacgaaaatattacttaaaataaagttaagagactaatta 21707615  T
Q  102 cgtaattttg 111  Q
     |||||||||    
T  21707614 tgtaattttg 21707605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 55140432 - 55140541
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||| ||||||||||||| |||||||||||||| ||| ||         ||||||||||||||| |||| |||||||||||||| ||| ||||||    
T  55140432 gataactattttgttattttatagcataaaggactaaaccgtaacaaaaataa-ataaaggacgaaagtattacttaaaataaagttaaaggattaattg 55140530  T
Q  102 cgtaattttgc 112  Q
     ||||||||||    
T  55140531 tgtaattttgc 55140541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 32488642 - 32488583
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||||||||||||||||||||||||  | ||||||||||||    
T  32488642 gataaaggactaaattgttacctaaaataaagttaagggactaaaagtgtaattttgcct 32488583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 301 - 432
Target Start/End: Complemental strand, 50158637 - 50158506
Alignment:
Q  301 atagtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacat 400  Q
    |||||||||| | |||||||||||||||||||| |||  ||| ||||||||| |  |||||||      |||||||| | ||||||| ||||| | ||||    
T  50158637 atagtgaattaatggtaattttataaatttgttgaagatgttggagattactgggcaattatgtcaccaaaatattaaattcattaaaaaaatgtcacat 50158538  T
Q  401 caatttaacatatctaataaacatgtttttta 432  Q
    |||||||| || |||||||||||||| |||||    
T  50158537 caatttaaaatgtctaataaacatgtatttta 50158506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 23549788 - 23549847
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||| |  |||||||||||    
T  23549788 gataaaggacgaaagtattatctaaaataaagttaaggaactaatcgtataattttgcct 23549847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 2686213 - 2686254
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgt 43  Q
    |||||| |||||||||||||||||||||||| ||||||||||    
T  2686213 gataacaatgttgttattttataacataaagtactaaatcgt 2686254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 23963107 - 23963147
Alignment:
Q  58 aaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    ||||||||||| ||||||||||||| |||||||||||||||    
T  23963107 aaaggacgaaattgttacctaaaattaagttaagggactaa 23963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 48419327 - 48419283
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgac 46  Q
    |||| ||||||||||||||||||||||||| |||||| |||||||    
T  48419327 gatatctatgttgttattttataacataaatgactaactcgtgac 48419283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 9902711 - 9902652
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  9902711 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 9902652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 10993683 - 10993624
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  10993683 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcct 10993624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 20983972 - 20983913
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| | |||||||||||||||||||||||| ||  | ||||||||||||    
T  20983972 gataaaggactaaattattacctaaaataaagttaagggaccaaaagtgtaattttgcct 20983913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 20984170 - 20984229
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  20984170 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 20984229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 32922323 - 32922382
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  32922323 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 32922382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 42728384 - 42728442
Alignment:
Q  156 tactttgtgaactcaacataacaca--tgtattttttcattgttagatcccaccaagga 212  Q
    |||||||| ||||||||||||||||  ||||||||| |||||  |||||||||||||||    
T  42728384 tactttgttaactcaacataacacatttgtatttttccattgacagatcccaccaagga 42728442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 52654188 - 52654247
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  52654188 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 52654247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 21360515 - 21360457
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| |||  |||||||||||| |||||||||||||| ||  |||||||||||    
T  21360515 gataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 21360457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 45655948 - 45656006
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||| ||| ||| ||||||||||||| |||||||||||||||  | |||||||||||    
T  45655948 gataaatgaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 45656006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 52538135 - 52538193
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  52538135 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 52538193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 52653989 - 52653931
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  52653989 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 52653931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 9644808 - 9644767
Alignment:
Q  57 taaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||| ||| ||||||||||||| |||||||||||||||    
T  9644808 taaaggaccaaattgttacctaaaattaagttaagggactaa 9644767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 22192611 - 22192582
Alignment:
Q  296 atagcatagtgaattgagggtaattttata 325  Q
    ||||||||||||||||||||||||||||||    
T  22192611 atagcatagtgaattgagggtaattttata 22192582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 4e-40; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 8851915 - 8851803
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  8851915 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 8851816  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  8851815 tgtaattttgcct 8851803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 25847679 - 25847791
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||||||||||||    
T  25847679 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattg 25847778  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  25847779 tgtaattttgcct 25847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 37513325 - 37513436
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||||||| |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  37513325 gataactatgttgatattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 37513424  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  37513425 tgtaattttgcc 37513436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 22316954 - 22317065
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||| |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||| |    
T  22316954 gataactttgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatcg 22317053  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  22317054 tgtaattttgcc 22317065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 49621213 - 49621324
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||| ||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||||||    
T  49621213 gataactatgttgttattttataatataaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggactaattg 49621312  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  49621313 tgtaattttgcc 49621324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 11121516 - 11121626
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  11121516 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatt 11121615  T
Q  101 gcgtaattttg 111  Q
    | |||||||||    
T  11121616 gtgtaattttg 11121626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 48433911 - 48433801
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaat 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||    
T  48433911 gataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaat 48433812  T
Q  100 tgcgtaatttt 110  Q
    |||||||||||    
T  48433811 tgcgtaatttt 48433801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 22316821 - 22316719
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22316821 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 22316722  T
Q  112 cct 114  Q
    |||    
T  22316721 cct 22316719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 22975579 - 22975688
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  22975579 gataactttgttgttattttataacataaaggactaaatcgtaacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattg 22975678  T
Q  102 cgtaattttg 111  Q
     |||||||||    
T  22975679 tgtaattttg 22975688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 28829986 - 28830099
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||         |||||||||||||||||||| |||||||||||||||||||||||||    
T  28829986 gataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttagctaaaataaagttaagggactaatt 28830085  T
Q  101 gcgtaattttgcct 114  Q
    | ||||||||||||    
T  28830086 gtgtaattttgcct 28830099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 36229997 - 36230106
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||| |||||    
T  36229997 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggattaatt 36230096  T
Q  101 gcgtaatttt 110  Q
    | ||||||||    
T  36230097 gtgtaatttt 36230106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 49711511 - 49711400
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||| |||||||||||||         ||||||||||| |||||||||||||||||||||||||||||||||||    
T  49711511 gataactatgttgttattttataacataaatgactaaatcgtga-taaaaaaagataaaggacgtaagtgttacctaaaataaagttaagggactaattg 49711413  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  49711412 tgtaattttgcct 49711400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 36229864 - 36229766
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36229864 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 36229766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 9296493 - 9296382
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||| | ||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  9296493 gataactatgttgttattttataacatagatgactaaatcgtgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaagttaagggactaattg 9296395  T
Q  102 cgtaattttgcct 114  Q
     ||| ||||||||    
T  9296394 tgtagttttgcct 9296382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 37513192 - 37513090
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||||||||||| || ||||||    
T  37513192 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattgtgttattttg 37513093  T
Q  112 cct 114  Q
    |||    
T  37513092 cct 37513090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 55009332 - 55009442
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||          ||||||||||||||||||||| ||||||||||||||||||||||||    
T  55009332 gataactatgttgttatttgataacataaaggactaaatcgtgataaaaaaaaagataaaggacgaaagtgttacttaaaataaagttaagggactaatt 55009431  T
Q  101 gcgtaattttg 111  Q
    | |||||||||    
T  55009432 gtgtaattttg 55009442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 22975446 - 22975344
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        |||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||||    
T  22975446 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaatgacaaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 22975347  T
Q  112 cct 114  Q
    |||    
T  22975346 cct 22975344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 25847546 - 25847444
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||| |||||||||||||||  ||||||||    
T  25847546 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaaattaagggactaattgtataattttg 25847447  T
Q  112 cct 114  Q
    |||    
T  25847446 cct 25847444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 3612707 - 3612598
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnnga-taaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||         | |||||||||||| ||||||||||||| |||||||||||||||||    
T  3612707 gataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaaaaataaaggacgaaaatgttacctaaaattaagttaagggactaatt 3612608  T
Q  101 gcgtaatttt 110  Q
    | ||||||||    
T  3612607 gtgtaatttt 3612598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 48434046 - 48434147
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnng-ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48434046 ttgtcattttataacataaaggactaaatcgtgacaaaaaaatatataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 48434145  T
Q  111 gc 112  Q
    ||    
T  48434146 gc 48434147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 28829853 - 28829753
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  28829853 ttgtcattttataacataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaaagaactaattgtgtaattttg 28829755  T
Q  112 cc 113  Q
    ||    
T  28829754 cc 28829753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 8852049 - 8852152
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||    
T  8852049 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctatttt 8852148  T
Q  111 gcct 114  Q
    ||||    
T  8852149 gcct 8852152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 44506286 - 44506389
Alignment:
Q  10 tgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattt 109  Q
    |||||||||||||||||||||||||||||||||| ||         ||||||||||||| ||||||||||||| ||||||||||| |||||| |||||||    
T  44506286 tgttgttattttataacataaaggactaaatcgttacaaaaaaataataaaggacgaaaatgttacctaaaattaagttaagggattaattgtgtaattt 44506385  T
Q  110 tgcc 113  Q
    ||||    
T  44506386 tgcc 44506389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 49621079 - 49620977
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||  ||| |||| | |||||||||    
T  49621079 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttagaggattaatcgtgtaattttg 49620980  T
Q  112 cct 114  Q
    |||    
T  49620979 cct 49620977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 44506142 - 44506049
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    ||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  44506142 attttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggattaattgtgtaatttt 44506049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 12 - 95
Target Start/End: Original strand, 49984955 - 49985038
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 95  Q
    |||| ||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||||||||    
T  49984955 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggac 49985038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 23043433 - 23043535
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnnga-taaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||||||         | |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||    
T  23043433 ttgtcattttataacataaaggactaaatcgtgacaaaaaaataaataaaggacgaaaatgttacctaaaataaagttaaaggactaattgtgtaatttt 23043532  T
Q  111 gcc 113  Q
    |||    
T  23043533 gcc 23043535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 33491692 - 33491750
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  33491692 gataaaggacgaaagtgttacctaaaataaagttaagagactaattgtgtaattttgcc 33491750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 55009198 - 55009121
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaa 90  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||    
T  55009198 ttgttattttataacataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaa 55009121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 23043298 - 23043186
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn----gataaaggacgaaagtgttacctaaaataaagttaagggacta 97  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||            |||||||||||||||||||||||||| |||||||| ||||||     
T  23043298 gataactatgtttttattttataacatagaggactaaatcgtgacaaaaaaaaaaacgataaaggacgaaagtgttacctaaagtaaagttatgggactt 23043199  T
Q  98 attgcgtaatttt 110  Q
    |||| ||||||||    
T  23043198 attgtgtaatttt 23043186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 17574473 - 17574372
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||    
T  17574473 ttgtaattttataacataaaggactaaatcgtaacaaaaaaaa-ataaaggacgaaagtgttacctaaaattaagttaatggacgaattgtgtaattttg 17574375  T
Q  112 cct 114  Q
    |||    
T  17574374 cct 17574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 49711687 - 49711743
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  49711687 ataacggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgc 49711743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 33491660 - 33491601
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||    
T  33491660 gataaaggacgaaactgttacctaaaataaagttaaggaactaattgtgtcattttgcct 33491601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 11121340 - 11121282
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |  |||||||||    
T  11121340 ataaaggacgaaagtgttgcctaaaataaagttaagggactaattgtgctattttgcct 11121282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 49984822 - 49984725
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaat 99  Q
    |||||||||||||||||||||||||||| | ||||||||||||||        |||||||||||||| | ||| |||||||||| ||||  |||||||    
T  49984822 gataactatgttgttattttataacatagaagactaaatcgtgacaaaaaaaagataaaggacgaaaatattatctaaaataaaattaaaagactaat 49984725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 10687880 - 10687936
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    ||||||||| |||||||||||||||||| |||||||| ||| ||||| |||||||||    
T  10687880 gataaaggatgaaagtgttacctaaaattaagttaagagacgaattgtgtaattttg 10687936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 2862759 - 2862700
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | ||||||||||||    
T  2862759 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcct 2862700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 41944132 - 41944191
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| | |||||||||||||||||||||||||||  | ||||||||||||    
T  41944132 gataaaggactaaactattacctaaaataaagttaagggactaaaagtgtaattttgcct 41944191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 39930691 - 39930633
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||||||||||||||||| ||||||| |||| ||||| |||||| ||||    
T  39930691 gataaaggactaaagtgttacctaaaattaagttaaaggacgaattgtgtaattatgcc 39930633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 1342180 - 1342235
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    ||||||||||||||||||||| ||| || |||||||||||  ||||| ||||||||    
T  1342180 gataaaggacgaaagtgttacttaatattaagttaagggataaattgtgtaatttt 1342235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 29196031 - 29195980
Alignment:
Q  158 ctttgtgaactcaacataacacatgtattttttcattgttagatcccaccaa 209  Q
    |||||| ||||||  | |||||||| ||||||||||||||||||||||||||    
T  29196031 ctttgtcaactcattaaaacacatgcattttttcattgttagatcccaccaa 29195980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 31574509 - 31574568
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  31574509 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcct 31574568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 50711251 - 50711310
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  50711251 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 50711310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 11221050 - 11220992
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||  ||| ||||||||||||| |||||||||||||||  | |||||||||||    
T  11221050 gataaaggatcaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 11220992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 14463379 - 14463437
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  14463379 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 14463437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 20209208 - 20209150
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  20209208 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 20209150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 44664679 - 44664621
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  44664679 gataaaggactaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcc 44664621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 45278516 - 45278482
Alignment:
Q  8 tatgttgttattttataacataaaggactaaatcg 42  Q
    ||||||| |||||||||||||||||||||||||||    
T  45278516 tatgttgatattttataacataaaggactaaatcg 45278482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 51000699 - 51000641
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| |||  |||||||||||| ||| |||||||||  |||||||||||||||    
T  51000699 gataaaggactaaaacgttacctaaaattaagataagggactgtttgcgtaattttgcc 51000641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 2e-39; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 35363095 - 35362984
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  35363095 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaggataaaggacgaaagtgttacctaaaataaagttaagggactaattg 35362996  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  35362995 tgtaattttgcc 35362984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 32936317 - 32936205
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||| |||||||||    
T  32936317 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagtgactaattg 32936218  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  32936217 tgtaattttgcct 32936205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 18485770 - 18485659
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  18485770 gataactatgttgttattttataacataaaggactaaattgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 18485671  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  18485670 tgtaattttgcc 18485659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 30370623 - 30370511
Alignment:
Q  1 agataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||||    
T  30370623 agataactatgttgttattttataacataaatgactaaatcgtgacaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggactaatt 30370524  T
Q  101 gcgtaattttgcc 113  Q
    | |||||||||||    
T  30370523 gtgtaattttgcc 30370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 40834173 - 40834281
Alignment:
Q  5 aactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgt 104  Q
    |||||||||||||||||||||||||||||||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40834173 aactatgttgttattttataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgt 40834272  T
Q  105 aattttgcc 113  Q
    |||||||||    
T  40834273 aattttgcc 40834281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 2094686 - 2094574
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||| |||||||||||||||||||||||||||||||||||||        |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  2094686 gataactttgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggaccaaagtgttacctaaaataaagttaagggattaattg 2094587  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  2094586 tgtaattttgcct 2094574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 7145773 - 7145884
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||| |||||     
T  7145773 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggattaatta 7145872  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  7145873 tgtaattttgcc 7145884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 40834037 - 40833935
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40834037 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 40833938  T
Q  112 cct 114  Q
    |||    
T  40833937 cct 40833935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 32936450 - 32936551
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32936450 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 32936549  T
Q  112 cc 113  Q
    ||    
T  32936550 cc 32936551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 13600557 - 13600443
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| ||| ||||||||    
T  13600557 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaagataaaggacgaaagtgttacctaaaataaaggtaaaggactaat 13600458  T
Q  100 tgcgtaattttgcct 114  Q
    || ||||||||||||    
T  13600457 tgtgtaattttgcct 13600443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 20769813 - 20769712
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  20769813 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtattacctaaaataaagttaagggactaattgtgtaattttg 20769714  T
Q  112 cc 113  Q
    ||    
T  20769713 cc 20769712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 35363233 - 35363336
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35363233 ttgtcattttataacataaaggactaaatcgtgacaaaaaagaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 35363332  T
Q  111 gcct 114  Q
    ||||    
T  35363333 gcct 35363336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 20769946 - 20770056
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||| |||||||||||||||    
T  20769946 gataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacggaagtgttacctaaaataatgttaagggactaatt 20770045  T
Q  101 gcgtaattttg 111  Q
    | |||||||||    
T  20770046 gtgtaattttg 20770056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 2094817 - 2094918
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||| ||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  2094817 ttgtcattttataatataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 2094916  T
Q  112 cc 113  Q
    ||    
T  2094917 cc 2094918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 13600695 - 13600792
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||||||        |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  13600695 attttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctacaataaagttaagagactaattgtgtaattttgcct 13600792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 19558122 - 19558218
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    ||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  19558122 attttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 19558218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 25363250 - 25363362
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||        |||||||||||||| ||||| ||||||| || |||||| ||||||||    
T  25363250 gataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaaattaaggaactaattg 25363349  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  25363350 tgtaattttgcct 25363362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 30370756 - 30370856
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  30370756 ttgtcattttataacataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttgcctaaaataaagttaagggactaattgtgtaattttg 30370854  T
Q  112 cc 113  Q
    ||    
T  30370855 cc 30370856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 18485904 - 18486006
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||| ||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||    
T  18485904 ttgtcattttataagataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgctattttg 18486003  T
Q  112 cct 114  Q
    |||    
T  18486004 cct 18486006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 3539709 - 3539600
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgac-nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    ||||||||||||||||||||||||||||||||||||||| |||||         |||||||||||||| ||||||||||||||||||||||||| |||||    
T  3539709 gataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggattaatt 3539610  T
Q  101 gcgtaatttt 110  Q
    |  |||||||    
T  3539609 gtataatttt 3539600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 15179039 - 15179136
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  15179039 attttataacataaaggactaaatcgttaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 15179136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 35362167 - 35362264
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||| ||        ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  35362167 attttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagcgttacctaaaattaagttaagggactaattgtgtaattttgcct 35362264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 15178900 - 15178789
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||        |||||||||||||| | ||| ||||||| ||||||| |||||||| |    
T  15178900 gataactatgttgttattttataacataaaagactaaatcgttacaaaaaaaagataaaggacgaaaatattatctaaaattaagttaaaggactaatcg 15178801  T
Q  102 cgtaattttgcc 113  Q
    ||||||||||||    
T  15178800 cgtaattttgcc 15178789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 7145639 - 7145532
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgac-----nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaa 106  Q
    |||| ||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  7145639 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtta 7145540  T
Q  107 ttttgcct 114  Q
    ||||||||    
T  7145539 ttttgcct 7145532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 20339214 - 20339155
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  20339214 gataaaggacgaaagtgttacctaaaataaagttaagggattaattgtgtaattttgcct 20339155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 32994442 - 32994501
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  32994442 gataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 32994501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 27843124 - 27843023
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||| ||||||||||| ||        |||||||||||||| ||||||||||||| |||||||||||||||||  |||||||||    
T  27843124 ttgtcattttataacataaaagactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttg 27843025  T
Q  112 cc 113  Q
    ||    
T  27843024 cc 27843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 37093738 - 37093790
Alignment:
Q  62 gacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37093738 gacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcct 37093790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 3539841 - 3539942
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||| ||| | |||||||||  ||||||||    
T  3539841 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaaattatgagactaattgtataattttg 3539939  T
Q  112 cct 114  Q
    |||    
T  3539940 cct 3539942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 132159 - 132048
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgt---gacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||||    |         |||||||||||||| ||||||||||||| || |||||||| |||    
T  132159 gataactatgttgttattttataacataaaggactaaatcgttaaaaaaaaaaaaagataaaggacgaaaatgttacctaaaattaaattaagggattaa 132060  T
Q  99 ttgcgtaatttt 110  Q
    ||| ||||||||    
T  132059 ttgtgtaatttt 132048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 35362029 - 35361922
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||         | ||| ||||||| ||||||||||| | ||||||||| ||||||||    
T  35362029 gataactatgttgttattttataacataaaggactaaatcgttacaacaaaaa-aaaaatgacgaaaatgttacctaaatttaagttaaggaactaattg 35361931  T
Q  102 cgtaatttt 110  Q
     ||||||||    
T  35361930 tgtaatttt 35361922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 25363111 - 25363016
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    ||||||||||||||||||||||||||| ||        |||||| ||||||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  25363111 attttataacataaaggactaaatcgttacaaaaaaa-gataaatgacgaaagtgttacctaaaattaagttaagggactgtttgtgtaattttgcc 25363016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 132298 - 132393
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||  |||||||||  |||||||| | ||||||||||    
T  132298 attttataacataaaggactaaatcgttacagaaaaaagataaaggacgaaagtgttacctaaa--aaagttaagtaactaattgtgcaattttgcct 132393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 32458075 - 32458133
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||| ||||||||||||    
T  32458075 ataaaggatgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 32458133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 32994270 - 32994164
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||         ||||||||||||| |||||  |||||| |||||||  |||||||||    
T  32994270 gataactatgttgttattttataacataaaagactaaatcgttacaaaaaa---ataaaggacgaaaatgttatttaaaattaagttaaacgactaattg 32994174  T
Q  102 cgtaattttg 111  Q
     |||||||||    
T  32994173 tgtaattttg 32994164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 423
Target Start/End: Complemental strand, 24541527 - 24541419
Alignment:
Q  314 ggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatat 413  Q
    |||||||||||||  || || |||||||| ||||||||| ||||||||||||    |||| ||||||||||||| ||||| | |||||||||| | || |    
T  24541527 ggtaattttataacattattgaaggagttggagattactggataattatgctaccaaaattttagactcattaa-aaaatgtcacatcaattttaaatgt 24541429  T
Q  414 ctaataaaca 423  Q
    ||||||||||    
T  24541428 ctaataaaca 24541419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 24541449 - 24541363
Alignment:
Q  123 tgtcacattattttcaaatgtctaatacatgtgtactttgtgaactcaacataacacatgtattttttcattgttagatcccaccaa 209  Q
    |||||||| | ||| |||||||||||| |   ||| ||||| |||||||||||||||||  |||||| ||||| |||||||||||||    
T  24541449 tgtcacatcaattttaaatgtctaataaacaagtattttgtaaactcaacataacacatacatttttccattggtagatcccaccaa 24541363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 329 - 431
Target Start/End: Original strand, 38015340 - 38015442
Alignment:
Q  329 ttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaataaacatgttt 428  Q
    ||||| |||||||| || |||| | |||||||||||| |  ||||| |||| ||||||| ||||| | |||||||||||| || ||||||||| |||| |    
T  38015340 ttgttgaaggagttggaaattattggataattatgctatcaaaataatagattcattaaaaaaatgtcacatcaatttaaaatgtctaataaatatgtat 38015439  T
Q  429 ttt 431  Q
    |||    
T  38015440 ttt 38015442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 1643597 - 1643538
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  1643597 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 1643538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 2467117 - 2467074
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  2467117 gataaaggaccaaactgttacctaaaattaagttaagggactaa 2467074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 9012263 - 9012314
Alignment:
Q  314 ggtaattttataaatttgttaaaggagttagagattactagataattatgct 365  Q
    ||||||||||| |||||||| || ||||| ||||||||||| ||||||||||    
T  9012263 ggtaattttatgaatttgttgaaagagttggagattactaggtaattatgct 9012314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 16736859 - 16736800
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  16736859 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 16736800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 24858461 - 24858418
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||    
T  24858461 gataaaggaccaaactgttacctaaaattaagttaagggactaa 24858418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 40952125 - 40952066
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  40952125 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 40952066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 2426287 - 2426229
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  2426287 gataaaggactaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 2426229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 14871792 - 14871734
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  14871792 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 14871734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 19131126 - 19131184
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  19131126 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 19131184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 33429789 - 33429847
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  33429789 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 33429847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 39589673 - 39589615
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  39589673 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 39589615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 2e-39; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 40902438 - 40902327
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  40902438 gataactatgttgttattttataacataaaggactaaatcgtgacaacaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 40902339  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  40902338 tgtaattttgcc 40902327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 17611536 - 17611424
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||| |||||||||||||||||||||||||    
T  17611536 gataactatgttgttattttataacataaaggactaaatcgtgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattg 17611437  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  17611436 tgtaattttgcct 17611424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 17985398 - 17985290
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||| |||||||||    
T  17985398 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagagactaattg 17985299  T
Q  102 cgtaatttt 110  Q
     ||||||||    
T  17985298 tgtaatttt 17985290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 2026954 - 2027065
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||||||||||||||||||||||||||||||||| |||||        ||||||||||||||||||||| |||||||||||||||||||||||||    
T  2026954 gataactatgttgttattttataacataaaggactaaattgtgacaaagaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattg 2027053  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  2027054 tgtaattttgcc 2027065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 7113976 - 7113864
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  7113976 gataactatgttgttgttttataatataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattg 7113877  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  7113876 tgtaattttgcct 7113864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 12115186 - 12115298
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  12115186 gataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattg 12115285  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  12115286 tgtaattttgcct 12115298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 30002322 - 30002214
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||| |||||||||| |||||||||||||||||||||||||    
T  30002322 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacataaaataaagttaagggactaattg 30002223  T
Q  102 cgtaatttt 110  Q
     ||||||||    
T  30002222 tgtaatttt 30002214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 2026822 - 2026720
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  2026822 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 2026723  T
Q  112 cct 114  Q
    |||    
T  2026722 cct 2026720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 12139258 - 12139370
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  12139258 gataactatgatgttattttataacatagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatt 12139357  T
Q  101 gcgtaattttgcc 113  Q
    | |||||||||||    
T  12139358 gtgtaattttgcc 12139370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 1549428 - 1549326
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  1549428 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttattttg 1549329  T
Q  112 cct 114  Q
    |||    
T  1549328 cct 1549326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 30563020 - 30563130
Alignment:
Q  5 aactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||         ||||||| ||||||||||||||||||||||||||||||||||||| | |    
T  30563020 aactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaatcgtg 30563119  T
Q  104 taattttgcct 114  Q
    |||||||||||    
T  30563120 taattttgcct 30563130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 17611674 - 17611771
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  17611674 attttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgcct 17611771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 19897287 - 19897176
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| ||||||||||||||||||    
T  19897287 gataactatgttgttattttttaacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggactaattg 19897188  T
Q  102 cgtaattttgcc 113  Q
      ||||||||||    
T  19897187 tataattttgcc 19897176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 4969599 - 4969711
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||        |||||||||| ||| ||||| ||||||| |||||||| |||||||||    
T  4969599 gataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacaaaaatgttatctaaaattaagttaagtgactaattg 4969698  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  4969699 tgtaattttgcct 4969711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 25780000 - 25779887
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn----gataaaggacgaaagtgttacctaaaataaagttaagggacta 97  Q
    ||||||||||||||||||||||||||||||| |||||||||||||            |||||||||||||||||||| ||||||||||||||||||||||    
T  25780000 gataactatgttgttattttataacataaagaactaaatcgtgacaaaaaaaaaaaagataaaggacgaaagtgttatctaaaataaagttaagggacta 25779901  T
Q  98 attgcgtaattttg 111  Q
    |||| |||||||||    
T  25779900 attgtgtaattttg 25779887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 30002454 - 30002552
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||    
T  30002454 ttgtcattttataacataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgttattttg 30002552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 30562884 - 30562783
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| |||||||||||||||| || ||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  30562884 ttgtcattttataacataaagaaccaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgttattttg 30562786  T
Q  112 cct 114  Q
    |||    
T  30562785 cct 30562783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 40902580 - 40902661
Alignment:
Q  20 ttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||        |||||||||| ||||||||||||||||||||||||||||||||||||    
T  40902580 ttataacataaaggactaaatcgtgacaaaaaaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattg 40902661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 40290014 - 40290128
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaat 99  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||          ||| |||||||||| ||||||||||||| ||||||||||||||||    
T  40290014 gataactatgttgttattttataacataaaagactaaatcgttacaaaaaaaaaagattaaggacgaaaatgttacctaaaattaagttaagggactaat 40290113  T
Q  100 tgcgtaattttgcct 114  Q
    |  ||||||||||||    
T  40290114 tatgtaattttgcct 40290128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 12139125 - 12139023
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||         |||||| |||||||| |||||||||||||| ||||| ||||||||| |||||||||    
T  12139125 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaaataaagaacgaaagtattacctaaaataaaattaagagactaattgtgtaattttg 12139026  T
Q  112 cct 114  Q
    |||    
T  12139025 cct 12139023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 17985532 - 17985634
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||| |||||||| |||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| |  ||||||    
T  17985532 ttgtcattttataatataaaggattaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgctattttg 17985631  T
Q  112 cct 114  Q
    |||    
T  17985632 cct 17985634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 25780177 - 25780231
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25780177 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 25780231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 7114108 - 7114208
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| |||||||||||||||||||||||| |||||         ||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  7114108 ttgtcattttataacataaaggactaaattgtgacaaaaaaaa-ataaaggacgaaagtgttatctaaaataaagttaatggactaattgtgtaattttg 7114206  T
Q  112 cc 113  Q
    ||    
T  7114207 cc 7114208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 303 - 432
Target Start/End: Complemental strand, 28962104 - 28961975
Alignment:
Q  303 agtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatca 402  Q
    ||||||||||||||||||||||| ||||||| |||| ||| ||||||||| | ||||||||      || ||||||| ||||||| ||||| | ||||||    
T  28962104 agtgaattgagggtaattttatagatttgttgaaggtgttggagattactgggtaattatgtcaccaaactattagattcattaaaaaaatgtcacatca 28962005  T
Q  403 atttaacatatctaataaacatgtttttta 432  Q
    |||||| || |||||||| ||||| |||||    
T  28962004 atttaaaatgtctaataagcatgtatttta 28961975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 25267382 - 25267499
Alignment:
Q  1 agataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnng----ataaaggacgaaagtgttacctaaaataaagttaagggact 96  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||             |||||||| |||||||||| ||||||| |||||||| ||||    
T  25267382 agatgactatgttgttattttataacataaaggattaaatcatgacaaaaaaaaataaaataaaggatgaaagtgttatctaaaattaagttaagagact 25267481  T
Q  97 aattgcgtaattttgcct 114  Q
     |||||||||||||||||    
T  25267482 gattgcgtaattttgcct 25267499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 19897466 - 19897525
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||| || |||||||||| ||||||  ||||||||||||    
T  19897466 gataaaggacgaaagtgttacctaagattaagttaaggggctaattatgtaattttgcct 19897525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 12115010 - 12114954
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||  |||||||||    
T  12115010 gataaaggatgaaaatgttacctaaaattaagttaagggactaattatgtaattttg 12114954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 5586545 - 5586486
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||  | ||||||||||||    
T  5586545 gataaaggactaaattgttacctaaaataaagttaagggaccaaaagtgtaattttgcct 5586486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 26874483 - 26874526
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  26874483 gataaaggactaaactgttacctaaaataaagttaagggactaa 26874526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 29233745 - 29233686
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||||| |||||||| ||||||||||||||| ||| |||||  |||||||||||    
T  29233745 gataaaggacgagagtgttacttaaaataaagttaagagaccaattggataattttgcct 29233686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 31089937 - 31090000
Alignment:
Q  370 aaatattagactcattaagaaaatttt-acatcaatttaacatatctaataaacatgtttttta 432  Q
    |||||||||||||||||| |||| | | |||||||||||| ||||||||||||||||| |||||    
T  31089937 aaatattagactcattaaaaaaaatgtcacatcaatttaaaatatctaataaacatgtatttta 31090000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 35521463 - 35521522
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | ||||||||||||    
T  35521463 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcct 35521522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 45315512 - 45315555
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  45315512 gataaaggactaaattgttacctaaaataaagttaagggactaa 45315555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 4969422 - 4969380
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggacta 97  Q
    |||||||||||||||||||||||||||| ||||||| ||||||    
T  4969422 gataaaggacgaaagtgttacctaaaattaagttaaaggacta 4969380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 34480440 - 34480498
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||  | |||||||||||    
T  34480440 gataaaggactaaattgttacttaaaataaagttaagggactaaaagtgtaattttgcc 34480498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 49564243 - 49564185
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| |||||||||||| |||| |||||||| ||| ||||| |||||||||||    
T  49564243 gataaaggacaaaagtgttacctgaaattaagttaagagacgaattgtgtaattttgcc 49564185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 289 - 431
Target Start/End: Complemental strand, 31421163 - 31421019
Alignment:
Q  289 agagtatatag--catagtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcatta 386  Q
    |||||||||||  |||||||| |||   ||||||||||  ||||| | ||||| |||||||||||||  ||||||||||     ||||||||||||| ||    
T  31421163 agagtatatagaacatagtgagttgcaagtaattttatggatttgctgaaggaattagagattactaagtaattatgctaccacaatattagactcaata 31421064  T
Q  387 agaaaattttacatcaatttaacatatctaataaacatgtttttt 431  Q
    | ||| | |  ||||||||||| || |||||||||||||| ||||    
T  31421063 aaaaattgtcccatcaatttaaaatgtctaataaacatgtatttt 31421019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 9172192 - 9172152
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcg 42  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  9172192 gataactatgttgtcattttataatataaaggactaaatcg 9172152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 9180174 - 9180134
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcg 42  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  9180174 gataactatgttgtcattttataatataaaggactaaatcg 9180134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 49564599 - 49564655
Alignment:
Q  58 aaaggacgaaagtgttacctaaaataaagtt-aagggactaattgcgtaattttgcc 113  Q
    ||||||||||||||||||||||||| ||||| || |||| ||||| |||||||||||    
T  49564599 aaaggacgaaagtgttacctaaaattaagttaaaaggacaaattgtgtaattttgcc 49564655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 5618129 - 5618070
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  5618129 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 5618070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 6489128 - 6489171
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||| ||| ||| |||||||||||||||||||||||||||||    
T  6489128 gataaatgactaaactgttacctaaaataaagttaagggactaa 6489171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 25012705 - 25012646
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  |  |||||||||||    
T  25012705 gataaaggaccaaactgttacctaaaattaagttaagggactaaaagattaattttgcct 25012646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 34480242 - 34480183
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  34480242 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 34480183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 4695192 - 4695250
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  4695192 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 4695250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 7349828 - 7349770
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||||||||| || |||| |||||||||||||||  | |||||||||||    
T  7349828 gataaaggaccaaagtgttatctgaaattaagttaagggactaaaagtgtaattttgcc 7349770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 8853352 - 8853410
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  8853352 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 8853410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 25267239 - 25267181
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||||||||||||| ||||||| || |||||||| |||||   ||||||||||    
T  25267239 gataaaggacgaaagtgttatctaaaattaaattaagggattaattatataattttgcc 25267181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 28554248 - 28554190
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  28554248 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 28554190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 31289312 - 31289254
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  31289312 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 31289254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 39672894 - 39672836
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  39672894 gataaaggactaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 39672836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 32523437 - 32523546
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  32523437 gataactatgttgttattttataacataaaggactaaatcgtgacaaataaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 32523536  T
Q  102 cgtaattttg 111  Q
     |||||||||    
T  32523537 tgtaattttg 32523546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 28408476 - 28408587
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  28408476 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagggactaattg 28408574  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  28408575 tgtaattttgcct 28408587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 8437416 - 8437304
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||||||||| |||||||||||||||||||||||||    
T  8437416 gataactatgttgttattttataacataaaggactaaatcatgacagaaaaaagataaaggacgaaagtgttacataaaataaagttaagggactaattg 8437317  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  8437316 tgtaattttgcct 8437304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 32178089 - 32178197
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||||||||||||||||||||||||||||||||||    
T  32178089 gataactatgttgttattttataacataaaggactaaatcgtgacaaaagaaagataaaggacaaaagtgttacctaaaataaagttaagggactaattg 32178188  T
Q  102 cgtaatttt 110  Q
     ||||||||    
T  32178189 tgtaatttt 32178197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 7417747 - 7417858
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||| ||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  7417747 gataactatgttgttattttataacaaaaaggactaaatcgtgacaaaaaaa-gataaaggacgaaagtgttacctaaaataaagttaagggactaattg 7417845  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  7417846 tgtaattttgcct 7417858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 19305854 - 19305739
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn---gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    ||||||||||||||||||||||||||||||||||||||| |||||           ||||||||||||||||||||||||||||||||||||||||||||    
T  19305854 gataactatgttgttattttataacataaaggactaaattgtgacaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaa 19305755  T
Q  99 ttgcgtaattttgcct 114  Q
    ||| ||||||||||||    
T  19305754 ttgtgtaattttgcct 19305739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 49114096 - 49114209
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    |||||||||||||||||||||||||| | ||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  49114096 gataactatgttgttattttataacacagaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaatt 49114195  T
Q  101 gcgtaattttgcct 114  Q
    | ||||||||||||    
T  49114196 gtgtaattttgcct 49114209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 32832468 - 32832576
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||||||| ||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||| |||||||||||||||    
T  32832468 gataactatattgttattttataacataaaggactaaatcgtgataaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattg 32832567  T
Q  102 cgtaatttt 110  Q
     ||||||||    
T  32832568 tgtaatttt 32832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 2933391 - 2933289
Alignment:
Q  8 tatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaat 107  Q
    ||||||||||||||||||||||||||||||||||||||         ||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  2933391 tatgttgttattttataacataaaggactaaatcgtgataaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaat 2933292  T
Q  108 ttt 110  Q
    |||    
T  2933291 ttt 2933289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 24986829 - 24986719
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||| |||||||||     
T  24986829 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaaattaaaggactaatt- 24986731  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  24986730 -gtaattttgcct 24986719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 32177956 - 32177854
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||    
T  32177956 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaaaggactaattgtgtaattttg 32177857  T
Q  112 cct 114  Q
    |||    
T  32177856 cct 32177854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 49113963 - 49113861
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  49113963 ttgtcattttataacataaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaaggactaattgtgtaattttg 49113864  T
Q  112 cct 114  Q
    |||    
T  49113863 cct 49113861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 32523302 - 32523213
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  32523302 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 32523213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 31894490 - 31894601
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||         ||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  31894490 gataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaa-ataaaggacgaaaatgttatctaaaattaagttaagggactaattg 31894588  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  31894589 tgtaattttgcct 31894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 12 - 111
Target Start/End: Complemental strand, 28408343 - 28408244
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  28408343 ttgtcattttataacataaaggactaaatcatgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaaggggctaattgtgtaattttg 28408244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 37453311 - 37453410
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||| ||||||        |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  37453311 ttgtcattttataacataaaggactaaaccgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactgattgtgtaattttg 37453410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 8437554 - 8437652
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  8437554 attttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgcct 8437652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 19305988 - 19306090
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||    
T  19305988 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttaactaaaataaagttaagggactaattgtgctattttg 19306087  T
Q  112 cct 114  Q
    |||    
T  19306088 cct 19306090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 1511300 - 1511190
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||         ||||||||||||| | ||||||||||| ||||||||||||||||||    
T  1511300 gataattatgttgttattttataacataaaggactaaatcgttacaaaaaaaa-ataaaggacgaaaatattacctaaaattaagttaagggactaattg 1511202  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  1511201 tgtaattttgcc 1511190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 7417613 - 7417511
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||||||         |||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||    
T  7417613 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggattaattgtgtaatttt 7417514  T
Q  111 gcc 113  Q
    |||    
T  7417513 gcc 7417511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 2933518 - 2933615
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||| |||||||| |  |||||||||    
T  2933518 attttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaggaactaattgtgctattttgcct 2933615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 1511437 - 1511533
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||    
T  1511437 attttataacataaaggactaaatcgttacaaaaaaa-gataaaggacgaaagtgttacctaaatttaagttaagggactaattgtgtaattttgcct 1511533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 10878723 - 10878624
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||| ||          |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  10878723 attttataacataaaggactaaatcgttacaaaaaaaaaagataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 10878624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 45746835 - 45746739
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||||||||||||||||||||| |||| |||||||||||         |||||||| |||||||||||||||||||||| |||||||||||    
T  45746835 gataactatgttgttattttataacatagaggattaaatcgtgacaaaaaataaataaaggaagaaagtgttacctaaaataaaggtaagggactaa 45746739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 44307668 - 44307610
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  44307668 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 44307610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 44307851 - 44307964
Alignment:
Q  2 gataactatgttgttattttataacata--aaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaat 99  Q
    ||||||||||||||||||||||||||||  ||||||||||| || ||        ||||||| |||||| ||||||||||||| ||||||||||| ||||    
T  44307851 gataactatgttgttattttataacatataaaggactaaattgttacaaaaaaaagataaagaacgaaaatgttacctaaaattaagttaagggattaat 44307950  T
Q  100 tgcgtaattttgcc 113  Q
    || |||||||||||    
T  44307951 tgtgtaattttgcc 44307964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 31894352 - 31894257
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||||||||||||||||| ||         ||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  31894352 attttataacataaaggactaaatcgttacaaaaaaa--ataaaggacgaaagtgttacctaaaattaagttaagggactatttgtgtaattttgcct 31894257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 45746969 - 45747070
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| |||||||||||||||| |||||||||||||        ||||||||||||||||||||||||||||||| |||||  ||||||||  ||||||||    
T  45746969 ttgtcattttataacataaag-actaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagaaactaattgtataattttg 45747067  T
Q  112 cct 114  Q
    |||    
T  45747068 cct 45747070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37453190 - 37453145
Alignment:
Q  1 agataactatgttgttattttataacataaaggactaaatcgtgac 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  37453190 agataactatgttgttattttataacataaaggactaaatcgtgac 37453145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 32832335 - 32832246
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||| |||||||||||||||||||||||| |||||        |||||| ||  |||||||||||||||||||| |||||||||||||||    
T  32832335 ttgtcattttataacataaaggactaaattgtgacaaaaaaaagataaaagataaaagtgttacctaaaataaaattaagggactaattg 32832246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 7172989 - 7172930
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||  | ||||||||||||    
T  7172989 gataaaggactaaattgttacctaaaataaagttaagggaccaaaagtgtaattttgcct 7172930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 4119569 - 4119619
Alignment:
Q  314 ggtaattttataaatttgttaaaggagttagagattactagataattatgc 364  Q
    |||||||||||||||||||| ||| |||| ||||||||||| |||||||||    
T  4119569 ggtaattttataaatttgttgaagcagttggagattactaggtaattatgc 4119619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 10878861 - 10878902
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgt 43  Q
    |||||| ||||||||||||||||||||||| |||||||||||    
T  10878861 gataacaatgttgttattttataacataaatgactaaatcgt 10878902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 316 - 432
Target Start/End: Complemental strand, 24708945 - 24708831
Alignment:
Q  316 taattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatct 415  Q
    |||||||||  ||||||| |||||||| ||  ||| | ||||||||||||    ||||||||||||| |||| ||||| | |||||||||||| || |||    
T  24708945 taattttatggatttgttgaaggagttgga--ttattggataattatgctaccaaaatattagactctttaaaaaaatgtcacatcaatttaaaatgtct 24708848  T
Q  416 aataaacatgtttttta 432  Q
    ||||| ||||| |||||    
T  24708847 aataagcatgtatttta 24708831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 30060510 - 30060425
Alignment:
Q  6 actatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagg 92  Q
    ||||||||| ||||||||||||||||||||||||||| |||        |||||||||| |||| |||||||||||| || ||||||    
T  30060510 actatgttgatattttataacataaaggactaaatcgggac-aaaaaaagataaaggacaaaagagttacctaaaattaacttaagg 30060425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 37452511 - 37452478
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagtt 88  Q
    ||||||||||||||||||||||||||||||||||    
T  37452511 gataaaggacgaaagtgttacctaaaataaagtt 37452478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 8869640 - 8869584
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||||||||  ||| ||||||||||||| |||||||||||| ||||| |||||||||    
T  8869640 gataaaggaataaaatgttacctaaaattaagttaagggacgaattgtgtaattttg 8869584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 8522382 - 8522323
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  8522382 gataaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaattttgcct 8522323  T

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Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 10543667 - 10543710
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||  ||| |||||||||||||||||||||||||||||    
T  10543667 gataaaggatcaaactgttacctaaaataaagttaagggactaa 10543710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 34287773 - 34287816
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||| |||||||||||| |||| |||||||||||||||    
T  34287773 gataaaggaccaaagtgttacctgaaattaagttaagggactaa 34287816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 38495170 - 38495229
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  38495170 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 38495229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 41922340 - 41922281
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  41922340 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 41922281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 43575306 - 43575365
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  43575306 gataaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaattttgcct 43575365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 45055380 - 45055321
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  45055380 gataaaggaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgcct 45055321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 45055578 - 45055637
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  45055578 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 45055637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 10878921 - 10878975
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    ||||||||||||| | ||| ||||||| ||||||||| |||||||| ||||||||    
T  10878921 ataaaggacgaaaatattagctaaaattaagttaaggtactaattgtgtaatttt 10878975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 12423903 - 12423845
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  12423903 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 12423845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 21733126 - 21733068
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||| ||| ||| |||||||| |||| |||||||||||||||| | |||||||||||    
T  21733126 gataaaagaccaaactgttacctgaaattaagttaagggactaatagtgtaattttgcc 21733068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 31283409 - 31283467
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||| |||||| |||||||||||||||  | |||||||||||    
T  31283409 gataaaggaccaaactgttacataaaattaagttaagggactaaaagtgtaattttgcc 31283467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 42391354 - 42391296
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  42391354 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 42391296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 44458040 - 44458098
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  44458040 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 44458098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 29226366 - 29226337
Alignment:
Q  17 attttataacataaaggactaaatcgtgac 46  Q
    ||||||||||||||||||||||||||||||    
T  29226366 attttataacataaaggactaaatcgtgac 29226337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 43161650 - 43161703
Alignment:
Q  60 aggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    ||||||||||| ||| || |||| |||||||||||| ||||| |||||||||||    
T  43161650 aggacgaaagtattagctgaaattaagttaagggacaaattgtgtaattttgcc 43161703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 81; Significance: 9e-38; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 137027 - 136915
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||||||||||    
T  137027 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattg 136928  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  136927 tgtaattttgcct 136915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 137158 - 137260
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| || |||||||||  |||||||||    
T  137158 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagtaaatggactaattatgtaattttg 137257  T
Q  112 cct 114  Q
    |||    
T  137258 cct 137260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 81; Significance: 9e-38; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 330308 - 330196
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||||||||||    
T  330308 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattg 330209  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  330208 tgtaattttgcct 330196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 330439 - 330541
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| || |||||||||  |||||||||    
T  330439 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagtaaatggactaattatgtaattttg 330538  T
Q  112 cct 114  Q
    |||    
T  330539 cct 330541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 9e-38; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 27360356 - 27360468
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||||||||||||||||||    
T  27360356 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattg 27360455  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  27360456 tgtaattttgcct 27360468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 9319913 - 9319804
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  9319913 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 9319814  T
Q  102 cgtaattttg 111  Q
     ||| |||||    
T  9319813 tgtagttttg 9319804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 17846242 - 17846354
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  17846242 gataactatgttgttattttataacatataggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattg 17846341  T
Q  102 cgtaattttgcct 114  Q
      |||||||||||    
T  17846342 tataattttgcct 17846354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 18916859 - 18916971
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||     
T  18916859 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaagaacgaaagtgttacctaaaataaagttaagggactaatta 18916958  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  18916959 tgtaattttgcct 18916971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 2318725 - 2318836
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||    
T  2318725 gataactatgttgttattttataacataaaagactaaatcgtgacaaaagaa-gataaaggacgaaagtgttacctaaaataaagttaagggactaattg 2318823  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  2318824 tgtaattttgcct 2318836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 20364081 - 20363970
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||| |||||||||||||||    
T  20364081 gataactatgttgttattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaaattaagggactaattg 20363982  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  20363981 tgtaattttgcc 20363970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 9320047 - 9320149
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9320047 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 9320146  T
Q  112 cct 114  Q
    |||    
T  9320147 cct 9320149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 18916726 - 18916624
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18916726 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 18916627  T
Q  112 cct 114  Q
    |||    
T  18916626 cct 18916624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 17846109 - 17846007
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||        |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  17846109 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttg 17846010  T
Q  112 cct 114  Q
    |||    
T  17846009 cct 17846007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 601564 - 601679
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn---gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    ||||||||||||||||||| |||||||||||||||||||||||||           |||||||||| |||||||||||||||||||||||||||||||||    
T  601564 gataactatgttgttatttcataacataaaggactaaatcgtgacaaaaaaaataagataaaggacaaaagtgttacctaaaataaagttaagggactaa 601663  T
Q  99 ttgcgtaattttgcct 114  Q
    ||| ||||||||||||    
T  601664 ttgtgtaattttgcct 601679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 4261387 - 4261502
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn---gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||||||||||||||||||||| ||||||||||||||||           |||||||||||||||||||||||||||||||||||| |||||||    
T  4261387 gataactatgttgttattttataacatagaggactaaatcgtgacaaaaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaacggactaa 4261486  T
Q  99 ttgcgtaattttgcct 114  Q
    ||| ||||||||||||    
T  4261487 ttgtgtaattttgcct 4261502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 10109049 - 10109160
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnng-ataaaggacgaaagtgttacctaaaataaagttaagggactaatt 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||          ||||||||||||||||||| ||||||||||||||||||||||| |    
T  10109049 gataactatattgttattttataacataaaggactaaatcgtgacaaaaaaaaatataaaggacgaaagtgttaactaaaataaagttaagggactaagt 10109148  T
Q  101 gcgtaattttgc 112  Q
    ||||||||||||    
T  10109149 gcgtaattttgc 10109160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 44536429 - 44536527
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||||||        ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  44536429 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaagataaaggatgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 44536527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 10044846 - 10044745
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||| |||||||| |||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10044846 ttgtcattttataacataaatgactaaattgtgacaaaaaaaagataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttg 10044747  T
Q  112 cc 113  Q
    ||    
T  10044746 cc 10044745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 20364215 - 20364316
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  20364215 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaaaataaaggacgaaagtgttacctaaaataaagttaaaggactaattgtgtaattttg 20364314  T
Q  112 cc 113  Q
    ||    
T  20364315 cc 20364316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 4261254 - 4261156
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||||||||||||||| ||        ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  4261254 ttgtcattttataacataaaggactaaatcgtaacaaaaaaaagataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaatttt 4261156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10044979 - 10045092
Alignment:
Q  1 agataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnn--gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||           |||||||||||||||||||| |||||| ||||||||||||||||    
T  10044979 agataactatgttattattttataacataaaggaataaatcgtgaaaaaaaaagaagataaaggacgaaagtgttaactaaaa-aaagttaagggactaa 10045077  T
Q  99 ttgcgtaattttgcc 113  Q
    |||||||||||||||    
T  10045078 ttgcgtaattttgcc 10045092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 10108915 - 10108813
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnn-gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| ||||||||||||||| ||||||||||||||         |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10108915 ttgtcattttataacataaatgactaaatcgtgacaaaaaaaaagataaaagacgaaagtgttacctaaaataaagttaagggactaattgtgtaatttt 10108816  T
Q  111 gcc 113  Q
    |||    
T  10108815 gcc 10108813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 12 - 101
Target Start/End: Complemental strand, 2318593 - 2318505
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||| ||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||    
T  2318593 ttgtcattttataacataaaggactaaatcgtgacaaaaaaaa-ataaaggacgaaagtgttacctaaaataaagttaagggactaattg 2318505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 30337520 - 30337424
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    ||||||||||||||||||||||||||| ||        |||||||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||    
T  30337520 attttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttacctaaaattaagttaatggactaattgtgtaattttgcc 30337424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 5547339 - 5547393
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  5547339 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaatttt 5547393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 8322429 - 8322529
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttg 111  Q
    |||| |||||||||||||||||||||||||||||         |||||||||||||| ||||||||||||| |||||||||||| ||||  |||||||||    
T  8322429 ttgtcattttataacataaaggactaaatcgtga--aaaaaaagataaaggacgaaaatgttacctaaaattaagttaagggacgaattctgtaattttg 8322526  T
Q  112 cct 114  Q
    |||    
T  8322527 cct 8322529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 27360176 - 27360118
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||    
T  27360176 ataaaggacgaaaatattacctaaaataaagttaagggactaattgtgtaattttgcct 27360118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 30337657 - 30337775
Alignment:
Q  1 agataactatgttgttattttataacataaaggactaaatcgtgac-----nnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggac 95  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||             |||||||||||| | ||||| ||||||| ||||||||||||    
T  30337657 agataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaaaaaaagataaaggacgataatgttatctaaaattaagttaagggac 30337756  T
Q  96 taattgcgtaattttgcct 114  Q
    |||||  ||||||||||||    
T  30337757 taattctgtaattttgcct 30337775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 18178377 - 18178434
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||| |||||||||||    
T  18178377 ataaaggacgaaagtattacctaatataaagttaaaggactaattgtgtaattttgcc 18178434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 546 - 591
Target Start/End: Complemental strand, 20117767 - 20117722
Alignment:
Q  546 atttagcactcaataagaattattccaaactttggcacttcttatc 591  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  20117767 atttagcactcaataagaaatattccaaactttggcacttcttatc 20117722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 601386 - 601327
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagtt-aagggactaattgcgtaattttgcc 113  Q
    |||||||||||||||||||||||||||||||||| ||| || |||||| |||||||||||    
T  601386 gataaaggacgaaagtgttacctaaaataaagttaaagagattaattgtgtaattttgcc 601327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 44536237 - 44536178
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||| | ||| ||||||    
T  44536237 gataaaggacggaagtgttacctaaaataaagttaaaggactaattgtgcaatattgcct 44536178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 31769839 - 31769781
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||| ||||| ||||||||||| |||||||| ||| ||||||||||||||||||    
T  31769839 ataaaggactaaagtattacctaaaattaagttaagagacgaattgcgtaattttgcct 31769781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 5547191 - 5547150
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgt 43  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  5547191 gataactatgttgttattttataacataaaagactaaatcgt 5547150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 10714066 - 10714008
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||  | |||||||||||    
T  10714066 gataaaggactaaattgttacctaaaataaagttaagggaccaaaagtgtaattttgcc 10714008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 13862593 - 13862496
Alignment:
Q  12 ttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||| |||||||||||||||||||||| ||| |||        |||||||||||||||| |||| |||||| ||||||| |||| ||||| ||||||||    
T  13862593 ttgtcattttataacataaaggactaattcgagacaaaaaaa-gataaaggacgaaagtattacttaaaattaagttaaaggacgaattgtgtaatttt 13862496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 33274653 - 33274710
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 112  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||  | ||||||||||    
T  33274653 gataaaggaccaaattgttacctaaaattaagttaagggactaaaagtgtaattttgc 33274710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 320 - 432
Target Start/End: Original strand, 3395029 - 3395141
Alignment:
Q  320 tttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatcaatttaacatatctaata 419  Q
    ||||| |||||||| ||||| ||  | |||| | ||||||||||||    ||||| |||| ||||||| ||||| | |||||||||||| || |||||||    
T  3395029 tttatgaatttgttgaaggaattgaaaattattggataattatgctaccaaaataatagattcattaaaaaaatgtcacatcaatttaaaatgtctaata 3395128  T
Q  420 aacatgtttttta 432  Q
    ||||||| |||||    
T  3395129 aacatgtatttta 3395141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40044401 - 40044361
Alignment:
Q  1 agataactatgttgttattttataacataaaggactaaatc 41  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  40044401 agataactatgttgatattttataatataaaggactaaatc 40044361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 1650759 - 1650818
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  1650759 gataaaggacaaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 1650818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 11723763 - 11723720
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaa 98  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||    
T  11723763 gataaaggaccaaactgttacctgaaataaagttaagggactaa 11723720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 30488336 - 30488395
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  30488336 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 30488395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 40710374 - 40710315
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||| |||| | |||||| |||| |||||||||||| ||||| ||||||||||||    
T  40710374 gataaaggatgaaaatattacctgaaattaagttaagggacgaattgtgtaattttgcct 40710315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 981822 - 981780
Alignment:
Q  72 ttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||    
T  981822 ttacctaaaattaagttaagggacaaattgtgtaattttgcct 981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 112
Target Start/End: Complemental strand, 5547145 - 5547103
Alignment:
Q  70 tgttacctaaaataaagttaagggactaattgcgtaattttgc 112  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||    
T  5547145 tgttatctaaaattaagttaagggactaattgtgtaattttgc 5547103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 26499479 - 26499421
Alignment:
Q  56 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    ||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||||    
T  26499479 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcct 26499421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 26499667 - 26499725
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  26499667 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 26499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 35412133 - 35412191
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcc 113  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | |||||||||||    
T  35412133 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 35412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 44536295 - 44536265
Alignment:
Q  2 gataactatgttgttattttataacataaag 32  Q
    |||||||||||||||||||||||||||||||    
T  44536295 gataactatgttgttattttataacataaag 44536265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 2450146 - 2450109
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagg 92  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  2450146 gataaaggactaaactgttacctaaaataaagttaagg 2450109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 28789123 - 28789180
Alignment:
Q  55 gataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgc 112  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||  | ||||||||||    
T  28789123 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 28789180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 37084880 - 37084917
Alignment:
Q  3 ataactatgttgttattttataacataaaggactaaat 40  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  37084880 ataactatgttgatattttataacataaaagactaaat 37084917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 12831 - 12943
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||        |||||||||||||| ||||| ||||||| ||||||||||||||||||    
T  12831 gataactatgttgttattttataacataaaggactaaatcgttacaaaaaaaagataaaggacgaaaatgttatctaaaattaagttaagggactaattg 12930  T
Q  102 cgtaattttgcct 114  Q
     ||||||||||||    
T  12931 tgtaattttgcct 12943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 12049 - 11940
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattg 101  Q
    |||||||||||||||||||||||||||||||||||||||||  ||         | |||| |||||| ||||||||||||| ||||||||||||||||||    
T  12049 gataactatgttgttattttataacataaaggactaaatcgataccaaaaaa--aaaaagaacgaaaatgttacctaaaattaagttaagggactaattg 11952  T
Q  102 cgtaattttgcc 113  Q
     |||||||||||    
T  11951 tgtaattttgcc 11940  T

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Target: scaffold0347; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 57 - 114
Target Start/End: Original strand, 12223 - 12280
Alignment:
Q  57 taaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaattttgcct 114  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  12223 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 12280  T

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Target: scaffold1577 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold1577
Description:

Target: scaffold1577; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 984 - 943
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaatcgt 43  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  984 gataactatgttgttattttataacataaaggactaaatcgt 943  T

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Target: scaffold1577; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 1121 - 1214
Alignment:
Q  17 attttataacataaaggactaaatcgtgacnnnnnnnngataaaggacgaaagtgttacctaaaataaagttaagggactaattgcgtaatttt 110  Q
    |||||||| |||||| ||||||||||||||        ||||||| |||| ||||||||||||||| || |||| |||||||||| ||||||||    
T  1121 attttatatcataaaagactaaatcgtgacaaaaaaaagataaagaacgagagtgttacctaaaattaaattaaaggactaattgtgtaatttt 1214  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 303 - 432
Target Start/End: Original strand, 96248 - 96377
Alignment:
Q  303 agtgaattgagggtaattttataaatttgttaaaggagttagagattactagataattatgcttttgaaatattagactcattaagaaaattttacatca 402  Q
    ||||||||||||||||||||||| ||||||| |||  ||| ||||||||| | ||||||||      || ||||||| ||||||| ||||| | ||||||    
T  96248 agtgaattgagggtaattttatagatttgttgaagatgttggagattactgggtaattatgtcaccaaactattagattcattaaaaaaatgtcacatca 96347  T
Q  403 atttaacatatctaataaacatgtttttta 432  Q
    |||||| || |||||||| ||||| |||||    
T  96348 atttaaaatgtctaataagcatgtatttta 96377  T

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Target: scaffold0053 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 40
Target Start/End: Complemental strand, 15150 - 15112
Alignment:
Q  2 gataactatgttgttattttataacataaaggactaaat 40  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  15150 gataactatgttgatattttataacataaagaactaaat 15112  T

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Target: scaffold0114 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 1115 - 1070
Alignment:
Q  300 catagtgaattgagggtaattttataaatttgttaaaggagttaga 345  Q
    |||||| |||||| ||||||| ||||| ||||||||||||||||||    
T  1115 catagtaaattgatggtaattatataagtttgttaaaggagttaga 1070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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