View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7577_2D_low_58 (Length: 249)
Name: NF7577_2D_low_58
Description: NF7577_2D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7577_2D_low_58 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 19 - 249
Target Start/End: Complemental strand, 30392487 - 30392257
Alignment:
| Q |
19 |
ctaattacttggtttaaattggtgctagattgccagtggtagtgctatgagacacgttgcttaacataatttaaagtcttacgttcaaccaaaataaatt |
118 |
Q |
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| T |
30392487 |
ctaattgcttggtttaaattggtgctagattgccggtggtagtgctatgagacacgttgcttaacataatttaaagtcttacgttcaactaaaataaatt |
30392388 |
T |
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| Q |
119 |
caagtggttaatgtattttgtttaaagttgaattttacgtacatcctatcaaagtaagttcaaaccactaggatcgaaccggtatacaatttaatttcac |
218 |
Q |
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| T |
30392387 |
caagtggttaatgtattttgtttaaagttgaattttacgtacatcctatcaaaataagttcaaaccactaggatcgaaccggtatacaatttaacttcac |
30392288 |
T |
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| Q |
219 |
tccaatatttatttcttttactaaaattatt |
249 |
Q |
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| T |
30392287 |
tccaatatttatttcttttactaaaattatt |
30392257 |
T |
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