View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7577_low_4 (Length: 304)
Name: NF7577_low_4
Description: NF7577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7577_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 13 - 289
Target Start/End: Original strand, 4682515 - 4682791
Alignment:
| Q |
13 |
aatatgctttgaaaagaagagtaaattttgcttttgaattaggtttactaccagtcaaggcagtggtgcctacagactgtactcttgtcaaggatttcgt |
112 |
Q |
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| T |
4682515 |
aatatgctttgaaaagcagagtaaattttgcttttgaattaggtttactaccagtcaaggcagtggtacctacagactgtactcttgtcaaggatttcgt |
4682614 |
T |
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| Q |
113 |
actatcttcttttccataattaaaagtgatcaaccggtcaacatggaagttggatatttacgtaccattaagacagtcttcactttgacaaaattttcaa |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4682615 |
actatcttcttttccataattaaaagtgatcaaccggtcaacatggaagttggatatttacgtaccattaagacagtcttcactttgacaaaattttcaa |
4682714 |
T |
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| Q |
213 |
aattttgactaaactaaatcatgattgaataatgtgcaaaagttagttgtatttaactatacaaaaggagatgtaag |
289 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
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| T |
4682715 |
aatgttgactaaactaaatcatgattgaataatgtgcaaaagttagttgtatttaacgatacaaaaggaaatgtaag |
4682791 |
T |
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