View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7580_high_37 (Length: 286)
Name: NF7580_high_37
Description: NF7580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7580_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 44935845 - 44935575
Alignment:
| Q |
1 |
atagtgcgtttgtcaaaaatgtcaagtgtattgaacacggtacgcgtggttctcaatccaacgaagnnnnnnnnnnnnnnnnnn---ggcaacaattgtc |
97 |
Q |
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| T |
44935845 |
atagtgcgtttgtcaaaaatgtcaagtgtattgaacacggcacgcgtggttctcaatccaacgaagtttttttttttttttttttttggcaacaattgtc |
44935746 |
T |
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| Q |
98 |
aaactaggatcaactcaatgatgtatatattgattctagttaagatttagcacttagattaaattttatgattaagttttaatacttaacaaggcaacta |
197 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44935745 |
aaactaggaacaactcaatgatgtatatattgattctagttaagatttagcacttagattaaattttatgattaagttttaatacttaacaaggcaacta |
44935646 |
T |
|
| Q |
198 |
tcagcaactaaaaacatagaaacatatatctatcgagataggactctgtttttggtatttattgagatagg |
268 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
44935645 |
tcagcaactaaaaacatagaaacatatatctatcgagataggactctgtttttggtatttattgaaatagg |
44935575 |
T |
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