View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7580_low_39 (Length: 279)

Name: NF7580_low_39
Description: NF7580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7580_low_39
NF7580_low_39
[»] chr7 (10 HSPs)
chr7 (187-264)||(44396872-44396949)
chr7 (13-82)||(44699798-44699867)
chr7 (77-114)||(5434550-5434587)
chr7 (82-114)||(17034964-17034996)
chr7 (82-114)||(25416434-25416466)
chr7 (88-120)||(44397044-44397076)
chr7 (82-114)||(47230767-47230799)
chr7 (82-111)||(39060513-39060542)
chr7 (85-114)||(39067185-39067214)
chr7 (81-110)||(41202970-41202999)
[»] chr8 (7 HSPs)
chr8 (187-264)||(11425026-11425103)
chr8 (81-114)||(4141332-4141365)
chr8 (81-114)||(21560321-21560354)
chr8 (84-120)||(11424896-11424932)
chr8 (82-114)||(28846189-28846221)
chr8 (84-114)||(32211719-32211749)
chr8 (82-114)||(10189410-10189442)
[»] chr4 (9 HSPs)
chr4 (187-264)||(5414715-5414792)
chr4 (82-120)||(5414583-5414621)
chr4 (82-114)||(2501884-2501916)
chr4 (82-114)||(31557609-31557641)
chr4 (82-114)||(46096474-46096506)
chr4 (82-114)||(53827249-53827281)
chr4 (80-114)||(21629865-21629899)
chr4 (81-109)||(10118911-10118939)
chr4 (82-114)||(20040359-20040391)
[»] chr3 (7 HSPs)
chr3 (190-264)||(18744121-18744195)
chr3 (82-115)||(10138141-10138174)
chr3 (81-114)||(35873530-35873563)
chr3 (82-114)||(34212143-34212175)
chr3 (82-114)||(52352977-52353009)
chr3 (81-114)||(43264379-43264412)
chr3 (82-114)||(10176771-10176803)
[»] chr5 (2 HSPs)
chr5 (77-111)||(10186487-10186521)
chr5 (82-114)||(37010439-37010471)
[»] chr6 (5 HSPs)
chr6 (82-115)||(20820296-20820329)
chr6 (82-114)||(32547838-32547870)
chr6 (82-111)||(18880812-18880841)
chr6 (82-114)||(10792375-10792407)
chr6 (82-114)||(16855890-16855922)
[»] chr1 (3 HSPs)
chr1 (81-114)||(13789480-13789513)
chr1 (82-114)||(25804630-25804662)
chr1 (82-111)||(39626524-39626553)
[»] scaffold0564 (1 HSPs)
scaffold0564 (82-114)||(4124-4156)
[»] scaffold0316 (1 HSPs)
scaffold0316 (82-114)||(3173-3205)
[»] chr2 (7 HSPs)
chr2 (82-114)||(7570950-7570982)
chr2 (82-114)||(16665545-16665577)
chr2 (82-114)||(22985460-22985492)
chr2 (84-114)||(37781389-37781419)
chr2 (82-115)||(284481-284514)
chr2 (85-114)||(29458479-29458508)
chr2 (74-115)||(29804957-29804997)


Alignment Details
Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 187 - 264
Target Start/End: Complemental strand, 44396949 - 44396872
Alignment:
Q  187 tatacgactgtcaaaatatttttaaactttttcccacataaagtgaatattgaatatagataatgggtcttccatttg 264  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44396949 tatacgactttcaaaatatttttaaactttttcccacataaagtgaatattgaatatagataatgggtcatccatttg 44396872  T

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Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 44699867 - 44699798
Alignment:
Q  13 aatataattgaatattttgtattaagataggaccaagtgaggtctagttgataacgactataatatataa 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44699867 aatataattgaatattttgtattaagataggaccaagtgaggtctagttgataacgactataatatataa 44699798  T

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Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 114
Target Start/End: Complemental strand, 5434587 - 5434550
Alignment:
Q  77 atataactaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||| |||||    
T  5434587 atataactaggtatataacccgtgcgttgcactggttt 5434550  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 17034996 - 17034964
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  17034996 actaggtatataacccgtgcgttgcacgggttt 17034964  T

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Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 25416434 - 25416466
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  25416434 actaggtatataacccgtgcgttgcacgggttt 25416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 44397076 - 44397044
Alignment:
Q  88 tatataacccgtgcgttgcacgggttttgatta 120  Q
    |||||||||||||||||||||||||||||||||    
T  44397076 tatataacccgtgcgttgcacgggttttgatta 44397044  T

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Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 47230767 - 47230799
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  47230767 actaggtatataacccgtgcgttgcacgggttt 47230799  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 111
Target Start/End: Original strand, 39060513 - 39060542
Alignment:
Q  82 actaggtatataacccgtgcgttgcacggg 111  Q
    ||||||||||||||||||||||||||||||    
T  39060513 actaggtatataacccgtgcgttgcacggg 39060542  T

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Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 39067185 - 39067214
Alignment:
Q  85 aggtatataacccgtgcgttgcacgggttt 114  Q
    ||||||||||||||||||||||||||||||    
T  39067185 aggtatataacccgtgcgttgcacgggttt 39067214  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 110
Target Start/End: Original strand, 41202970 - 41202999
Alignment:
Q  81 aactaggtatataacccgtgcgttgcacgg 110  Q
    ||||||||||||||||||||||||||||||    
T  41202970 aactaggtatataacccgtgcgttgcacgg 41202999  T

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Target: chr8 (Bit Score: 62; Significance: 8e-27; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 187 - 264
Target Start/End: Original strand, 11425026 - 11425103
Alignment:
Q  187 tatacgactgtcaaaatatttttaaactttttcccacataaagtgaatattgaatatagataatgggtcttccatttg 264  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||    
T  11425026 tatacgattgtcaaaatatttttaaactttttcctacataaagtgaatattgaatatagataatgggtcacccatttg 11425103  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 4141365 - 4141332
Alignment:
Q  81 aactaggtatataacccgtgcgttgcacgggttt 114  Q
    ||||||||||||||||||||||||||||||||||    
T  4141365 aactaggtatataacccgtgcgttgcacgggttt 4141332  T

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Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 21560321 - 21560354
Alignment:
Q  81 aactaggtatataacccgtgcgttgcacgggttt 114  Q
    ||||||||||||||||||||||||||||||||||    
T  21560321 aactaggtatataacccgtgcgttgcacgggttt 21560354  T

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Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 11424896 - 11424932
Alignment:
Q  84 taggtatataacccgtgcgttgcacgggttttgatta 120  Q
    ||||||||||||||||||||||||||| |||||||||    
T  11424896 taggtatataacccgtgcgttgcacggattttgatta 11424932  T

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Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 28846221 - 28846189
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  28846221 actaggtatataacccgtgcgttgcacgggttt 28846189  T

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Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 114
Target Start/End: Complemental strand, 32211749 - 32211719
Alignment:
Q  84 taggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||    
T  32211749 taggtatataacccgtgcgttgcacgggttt 32211719  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 10189442 - 10189410
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||| ||||    
T  10189442 actaggtatataacccgtgcgttgcacgagttt 10189410  T

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Target: chr4 (Bit Score: 62; Significance: 8e-27; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 187 - 264
Target Start/End: Original strand, 5414715 - 5414792
Alignment:
Q  187 tatacgactgtcaaaatatttttaaactttttcccacataaagtgaatattgaatatagataatgggtcttccatttg 264  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  5414715 tatacaactgtcaaaatatttttaaactttttcccacataaagtgaatattgaatatagataatgtgtcacccatttg 5414792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 120
Target Start/End: Original strand, 5414583 - 5414621
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttttgatta 120  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  5414583 actaggtatctaacccgtgcgttgcacgggttttgatta 5414621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 2501884 - 2501916
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  2501884 actaggtatataacccgtgcgttgcacgggttt 2501916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 31557641 - 31557609
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  31557641 actaggtatataacccgtgcgttgcacgggttt 31557609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 46096506 - 46096474
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  46096506 actaggtatataacccgtgcgttgcacgggttt 46096474  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 53827249 - 53827281
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  53827249 actaggtatataacccgtgcgttgcacgggttt 53827281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 114
Target Start/End: Original strand, 21629865 - 21629899
Alignment:
Q  80 taactaggtatataacccgtgcgttgcacgggttt 114  Q
    ||||||||||||||||||||||||||||| |||||    
T  21629865 taactaggtatataacccgtgcgttgcacaggttt 21629899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 109
Target Start/End: Complemental strand, 10118939 - 10118911
Alignment:
Q  81 aactaggtatataacccgtgcgttgcacg 109  Q
    |||||||||||||||||||||||||||||    
T  10118939 aactaggtatataacccgtgcgttgcacg 10118911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 20040391 - 20040359
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||| ||||    
T  20040391 actaggtatataacccgtgcgttgcacgagttt 20040359  T

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Target: chr3 (Bit Score: 47; Significance: 7e-18; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 190 - 264
Target Start/End: Complemental strand, 18744195 - 18744121
Alignment:
Q  190 acgactgtcaaaatatttttaaactttttcccacataaagtgaatattgaatatagataatgggtcttccatttg 264  Q
    |||| |||||||||||||||| ||||||||||||| | ||||||||| ||||||||||||||||||  |||||||    
T  18744195 acgattgtcaaaatatttttagactttttcccacacagagtgaatatcgaatatagataatgggtcacccatttg 18744121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 115
Target Start/End: Original strand, 10138141 - 10138174
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggtttt 115  Q
    ||||||||||||||||||||||||||||||||||    
T  10138141 actaggtatataacccgtgcgttgcacgggtttt 10138174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 35873563 - 35873530
Alignment:
Q  81 aactaggtatataacccgtgcgttgcacgggttt 114  Q
    ||||||||||||||||||||||||||||||||||    
T  35873563 aactaggtatataacccgtgcgttgcacgggttt 35873530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 34212175 - 34212143
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  34212175 actaggtatataacccgtgcgttgcacgggttt 34212143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 52353009 - 52352977
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  52353009 actaggtatataacccgtgcgttgcacgggttt 52352977  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 114
Target Start/End: Original strand, 43264379 - 43264412
Alignment:
Q  81 aactaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||| |||||||||||||    
T  43264379 aactaggtatataacccgtgggttgcacgggttt 43264412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 10176771 - 10176803
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    ||||||| |||||||||||||||||||||||||    
T  10176771 actaggtttataacccgtgcgttgcacgggttt 10176803  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 111
Target Start/End: Complemental strand, 10186521 - 10186487
Alignment:
Q  77 atataactaggtatataacccgtgcgttgcacggg 111  Q
    |||||||||||||||||||||||||||||||||||    
T  10186521 atataactaggtatataacccgtgcgttgcacggg 10186487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 37010471 - 37010439
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  37010471 actaggtatataacccgtgcgttgcacgggttt 37010439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 115
Target Start/End: Complemental strand, 20820329 - 20820296
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggtttt 115  Q
    ||||||||||||||||||||||||||||||||||    
T  20820329 actaggtatataacccgtgcgttgcacgggtttt 20820296  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 32547870 - 32547838
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  32547870 actaggtatataacccgtgcgttgcacgggttt 32547838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 18880841 - 18880812
Alignment:
Q  82 actaggtatataacccgtgcgttgcacggg 111  Q
    ||||||||||||||||||||||||||||||    
T  18880841 actaggtatataacccgtgcgttgcacggg 18880812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 10792407 - 10792375
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    ||||||||||||||||||||||||||| |||||    
T  10792407 actaggtatataacccgtgcgttgcaccggttt 10792375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 16855922 - 16855890
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    ||||||| |||||||||||||||||||||||||    
T  16855922 actaggtttataacccgtgcgttgcacgggttt 16855890  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 114
Target Start/End: Complemental strand, 13789513 - 13789480
Alignment:
Q  81 aactaggtatataacccgtgcgttgcacgggttt 114  Q
    ||||||||||||||||||||||||||||||||||    
T  13789513 aactaggtatataacccgtgcgttgcacgggttt 13789480  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 25804630 - 25804662
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  25804630 actaggtatataacccgtgcgttgcacgggttt 25804662  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 111
Target Start/End: Complemental strand, 39626553 - 39626524
Alignment:
Q  82 actaggtatataacccgtgcgttgcacggg 111  Q
    ||||||||||||||||||||||||||||||    
T  39626553 actaggtatataacccgtgcgttgcacggg 39626524  T

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Target: scaffold0564 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 4156 - 4124
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  4156 actaggtatataacccgtgcgttgcacgggttt 4124  T

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Target: scaffold0316 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 3173 - 3205
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  3173 actaggtatataacccgtgcgttgcacgggttt 3205  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 7570950 - 7570982
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  7570950 actaggtatataacccgtgcgttgcacgggttt 7570982  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 16665545 - 16665577
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  16665545 actaggtatataacccgtgcgttgcacgggttt 16665577  T

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Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 22985460 - 22985492
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||||    
T  22985460 actaggtatataacccgtgcgttgcacgggttt 22985492  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 114
Target Start/End: Complemental strand, 37781419 - 37781389
Alignment:
Q  84 taggtatataacccgtgcgttgcacgggttt 114  Q
    |||||||||||||||||||||||||||||||    
T  37781419 taggtatataacccgtgcgttgcacgggttt 37781389  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 115
Target Start/End: Complemental strand, 284514 - 284481
Alignment:
Q  82 actaggtatataacccgtgcgttgcacgggtttt 115  Q
    |||||||||||||||| |||||||||||||||||    
T  284514 actaggtatataacccttgcgttgcacgggtttt 284481  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 29458508 - 29458479
Alignment:
Q  85 aggtatataacccgtgcgttgcacgggttt 114  Q
    ||||||||||||||||||||||||||||||    
T  29458508 aggtatataacccgtgcgttgcacgggttt 29458479  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 29804957 - 29804997
Alignment:
Q  74 aatatataactaggtatataacccgtgcgttgcacgggtttt 115  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  29804957 aatatataa-taggtatttaacccgtgcgttgcacgggtttt 29804997  T

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