View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7582_high_6 (Length: 327)

Name: NF7582_high_6
Description: NF7582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7582_high_6
NF7582_high_6
[»] chr1 (14 HSPs)
chr1 (17-327)||(43388155-43388465)
chr1 (17-327)||(16917851-16918161)
chr1 (17-327)||(37191252-37191562)
chr1 (23-206)||(51993891-51994074)
chr1 (112-327)||(51052363-51052578)
chr1 (254-327)||(6050628-6050701)
chr1 (254-327)||(11909147-11909220)
chr1 (257-327)||(35541077-35541147)
chr1 (55-170)||(6259643-6259758)
chr1 (254-327)||(47623119-47623192)
chr1 (275-327)||(22191823-22191875)
chr1 (17-80)||(37297802-37297865)
chr1 (23-181)||(47623263-47623421)
chr1 (241-321)||(51993776-51993856)
[»] chr4 (27 HSPs)
chr4 (17-327)||(12697601-12697911)
chr4 (23-327)||(8360894-8361198)
chr4 (17-249)||(4548339-4548571)
chr4 (17-327)||(20002506-20002823)
chr4 (26-321)||(54483207-54483502)
chr4 (17-135)||(55725827-55725945)
chr4 (46-327)||(7403730-7404011)
chr4 (254-327)||(45472751-45472824)
chr4 (23-327)||(2822079-2822383)
chr4 (85-206)||(48311951-48312072)
chr4 (86-327)||(1828582-1828823)
chr4 (240-327)||(55725728-55725815)
chr4 (118-327)||(13270933-13271142)
chr4 (46-327)||(47685937-47686218)
chr4 (55-327)||(15740047-15740319)
chr4 (254-327)||(19755292-19755365)
chr4 (254-327)||(19784441-19784514)
chr4 (254-327)||(23642633-23642706)
chr4 (254-327)||(47418829-47418902)
chr4 (121-192)||(11587375-11587446)
chr4 (17-83)||(5148449-5148515)
chr4 (240-327)||(11587240-11587327)
chr4 (278-323)||(136457-136502)
chr4 (250-327)||(5790134-5790211)
chr4 (104-173)||(19740236-19740305)
chr4 (240-324)||(46145686-46145770)
chr4 (241-321)||(48312107-48312187)
[»] chr3 (26 HSPs)
chr3 (17-327)||(12342268-12342577)
chr3 (17-327)||(11203607-11203917)
chr3 (17-327)||(29523787-29524097)
chr3 (17-327)||(33496335-33496645)
chr3 (17-327)||(7031059-7031369)
chr3 (17-327)||(36801117-36801427)
chr3 (17-327)||(35214413-35214723)
chr3 (17-327)||(19890466-19890776)
chr3 (17-182)||(11310382-11310547)
chr3 (23-206)||(48570202-48570385)
chr3 (86-327)||(26771031-26771272)
chr3 (55-327)||(34332857-34333129)
chr3 (254-327)||(19920271-19920344)
chr3 (254-327)||(2364302-2364375)
chr3 (254-327)||(7312801-7312874)
chr3 (254-327)||(10323613-10323686)
chr3 (86-323)||(40930574-40930811)
chr3 (254-323)||(7032343-7032412)
chr3 (240-324)||(2755853-2755937)
chr3 (32-327)||(17097918-17098213)
chr3 (250-327)||(15312604-15312681)
chr3 (250-327)||(16178969-16179046)
chr3 (250-315)||(48570093-48570158)
chr3 (240-324)||(963208-963292)
chr3 (20-64)||(15312374-15312418)
chr3 (275-327)||(44887950-44888002)
[»] chr6 (21 HSPs)
chr6 (17-327)||(17606376-17606686)
chr6 (17-327)||(21630149-21630461)
chr6 (17-327)||(17579123-17579433)
chr6 (31-327)||(17573697-17573993)
chr6 (17-327)||(10577291-10577584)
chr6 (17-327)||(20883075-20883385)
chr6 (17-303)||(11462201-11462486)
chr6 (17-135)||(14513791-14513909)
chr6 (17-116)||(215191-215290)
chr6 (20-327)||(14373033-14373340)
chr6 (254-327)||(12734150-12734223)
chr6 (95-327)||(15958855-15959088)
chr6 (254-327)||(18651276-18651349)
chr6 (46-327)||(24767466-24767747)
chr6 (254-327)||(2553662-2553735)
chr6 (55-183)||(21168051-21168179)
chr6 (240-324)||(13937711-13937795)
chr6 (86-183)||(2553494-2553591)
chr6 (104-173)||(17330837-17330906)
chr6 (254-327)||(21168224-21168297)
chr6 (239-327)||(33185446-33185534)
[»] chr5 (29 HSPs)
chr5 (17-327)||(27766831-27767140)
chr5 (17-327)||(8300224-8300534)
chr5 (17-327)||(25857466-25857776)
chr5 (17-327)||(33385416-33385726)
chr5 (125-327)||(10776660-10776862)
chr5 (23-319)||(18359142-18359436)
chr5 (17-129)||(10774239-10774351)
chr5 (55-210)||(19255282-19255437)
chr5 (26-321)||(27795280-27795575)
chr5 (110-327)||(23238265-23238482)
chr5 (254-327)||(28535717-28535790)
chr5 (250-327)||(26072913-26072990)
chr5 (254-327)||(30732356-30732429)
chr5 (254-327)||(42513745-42513818)
chr5 (55-327)||(8227852-8228124)
chr5 (55-327)||(27117203-27117475)
chr5 (112-327)||(12825082-12825297)
chr5 (104-327)||(18089803-18090026)
chr5 (46-195)||(42927948-42928097)
chr5 (29-171)||(26072692-26072834)
chr5 (55-180)||(28535864-28535989)
chr5 (254-327)||(31641537-31641609)
chr5 (254-327)||(35983833-35983906)
chr5 (46-180)||(35983980-35984114)
chr5 (254-327)||(19255164-19255237)
chr5 (104-173)||(33169533-33169602)
chr5 (250-327)||(42928152-42928229)
chr5 (240-324)||(33169669-33169753)
chr5 (20-169)||(27166152-27166301)
[»] chr8 (26 HSPs)
chr8 (17-327)||(37433920-37434230)
chr8 (17-327)||(20824084-20824394)
chr8 (17-327)||(2170128-2170440)
chr8 (17-327)||(17699270-17699580)
chr8 (17-321)||(43270238-43270542)
chr8 (17-300)||(2529674-2529957)
chr8 (17-323)||(13199911-13200217)
chr8 (17-261)||(42177673-42177917)
chr8 (26-287)||(13879569-13879830)
chr8 (23-315)||(25090181-25090473)
chr8 (55-327)||(32266390-32266662)
chr8 (86-327)||(13396245-13396486)
chr8 (86-194)||(5181527-5181635)
chr8 (254-327)||(7924411-7924484)
chr8 (254-327)||(8299828-8299901)
chr8 (46-327)||(9922418-9922699)
chr8 (257-327)||(172131-172201)
chr8 (97-142)||(37434524-37434569)
chr8 (277-327)||(41665411-41665461)
chr8 (240-321)||(34137011-34137092)
chr8 (121-176)||(34137156-34137211)
chr8 (288-327)||(42177631-42177670)
chr8 (240-326)||(25891077-25891163)
chr8 (257-326)||(5181698-5181767)
chr8 (110-183)||(41665555-41665628)
chr8 (243-327)||(37718861-37718945)
[»] chr2 (13 HSPs)
chr2 (32-327)||(14439556-14439850)
chr2 (17-327)||(10999993-11000302)
chr2 (17-327)||(12645324-12645634)
chr2 (23-206)||(33515947-33516130)
chr2 (41-327)||(15917466-15917752)
chr2 (23-206)||(40176463-40176646)
chr2 (55-327)||(41206842-41207114)
chr2 (55-327)||(28252546-28252818)
chr2 (137-327)||(17765004-17765194)
chr2 (254-327)||(4552194-4552267)
chr2 (250-321)||(40176689-40176760)
chr2 (17-189)||(38604554-38604727)
chr2 (254-327)||(38604416-38604489)
[»] chr7 (14 HSPs)
chr7 (17-327)||(37254546-37254856)
chr7 (17-327)||(25619247-25619557)
chr7 (169-319)||(18532568-18532718)
chr7 (17-173)||(18530298-18530454)
chr7 (46-327)||(235479-235762)
chr7 (55-327)||(11277294-11277566)
chr7 (92-327)||(47876846-47877081)
chr7 (254-327)||(4938170-4938243)
chr7 (254-327)||(17720660-17720733)
chr7 (254-327)||(29968000-29968073)
chr7 (55-327)||(37919370-37919642)
chr7 (241-327)||(551595-551681)
chr7 (46-180)||(17720452-17720586)
chr7 (110-183)||(29967856-29967929)
[»] scaffold0472 (1 HSPs)
scaffold0472 (56-327)||(3079-3350)
[»] scaffold0369 (1 HSPs)
scaffold0369 (55-327)||(11247-11519)
[»] scaffold0034 (1 HSPs)
scaffold0034 (254-327)||(105885-105958)


Alignment Details
Target: chr1 (Bit Score: 283; Significance: 1e-158; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 43388155 - 43388465
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43388155 aataatgatcgacgcgatttcaaaccacctgcatattcaataaattgcacaaagtgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 43388254  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43388255 cccgcaccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcctgcatcccgttacacaaaaccgattttc 43388354  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43388355 cacagctataatcccacgttccaccaattttgatttagtaggtaaacgatccctcaacaatcgccaagcaaggatagaaacttttaaaggaacctgttta 43388454  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  43388455 tgccaaattaa 43388465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 16918161 - 16917851
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||||||| ||| |||| |||| |||| |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  16918161 aataatgattgacacgatgtcaagccacctgcatattcaataaattgcacaaagtgatctgacatagtatgagaatcgaccccttcgacaccaagccaag 16918062  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||    
T  16918061 cccgcaccagaggccacaaagcaccaaaagtcggacaagacaaaaataaatgattcacatcttcaacctgcccacatcccattacacaaaaccggttttc 16917962  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    | || |||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16917961 cgcagctataatccctcgtgccaccaaattagatttagtaggtaagcgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 16917862  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  16917861 tgccaaattaa 16917851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 37191562 - 37191252
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||||| |||||||| |||| ||||||||| ||||||||||||||||||| |||||||  ||||||||| ||||||| ||||||||||||      
T  37191562 aataaagatcgacgggatttcaagccacctgcatattcgataaattgcacaaaatgatctgagataacatgagaatctacccctttgacaccaagccatt 37191463  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| |||||| || ||||| |||||||||||||||||||| | |||||||||||||||||| ||||| |||||||| |||||||| ||||  ||    
T  37191462 cccgcaccataggccataatgcaccgaaaattggacaagacaaaaacatatgattcacatcttcaacatgcccacatcccgtgacacaaaatcgatcctc 37191363  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  | |||| ||||| ||  |||| || |||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||| ||||| |||||    
T  37191362 cacagatgtaatgccacgatctgccaagttggatttagtaggtaatcgatctctcaacagccgccaagcaaggatataaacttttaaatgaaccagttta 37191263  T
Q  317 tgccaaattaa 327  Q
    ||||| |||||    
T  37191262 tgccagattaa 37191252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 206
Target Start/End: Complemental strand, 51994074 - 51993891
Alignment:
Q  23 gatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgca 122  Q
    |||||||||||||||||  |||  ||||||| ||||||||||| ||||||||   ||  || ||||||||| |||||||| |||||||||||| ||||||    
T  51994074 gatcgacgcgatttcaaggcaccagcatattgaataaattgcataaaatgatccaagtgagcatgagaatctaccccttctacaccaagccaatcccgca 51993975  T
Q  123 ccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaa 206  Q
    ||| ||||||||||||||| || | ||||||||||||||  ||||||  |||||||||||| ||||| |||||||| |||||||    
T  51993974 ccataggccacaaagcaccgaagaatggacaagacaaaatcaaatgagacacatcttcaacatgcccacatcccgtgacacaaa 51993891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 112 - 327
Target Start/End: Original strand, 51052363 - 51052578
Alignment:
Q  112 ccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccga 211  Q
    |||| |||||||||  ||||| || ||||||||| ||| |||||||||||| ||||||   |||||||| ||   ||| ||||| |  ||||| |||||     
T  51052363 ccaatcccgcaccatcggccataatgcaccaaaagttgcacaagacaaaaacaaatgagaaacatcttcgacaatcccacatccagaaacacataaccgc 51052462  T
Q  212 ttttccacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacct 311  Q
    |  ||||||  || ||| ||||| |   |||||||   ||| |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||||||||    
T  51052463 tcctccacagatagaatgccacgatttgccaaattaagttttgtaggtaaccgatccctcagaagtcgccaagcaaggatagatactttgagaggaacct 51052562  T
Q  312 gtttatgccaaattaa 327  Q
    ||||||||||||||||    
T  51052563 gtttatgccaaattaa 51052578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 6050628 - 6050701
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  6050628 gtaggtaaccgatccctcattagtcgccaagcaaggatagagactttgagagggacctgtttatgccaaattaa 6050701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 11909220 - 11909147
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  ||||||||||||| |||||| ||||| | ||||||||||||||||||||||||    
T  11909220 gtaggtaaccgatccctcagaagtcgccaagcaatgatagatactttgagaggaacctgtttatgccaaattaa 11909147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 35541077 - 35541147
Alignment:
Q  257 ggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  35541077 ggtaaccgatccctcagtagtcgccaagcaaggatagatactttgagagggacctgtttatgccaaattaa 35541147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 6259643 - 6259758
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    ||||||||||| |||||||| |||  | |  ||||||||||||||| | || || ||||| || |||||||| ||||| |||||||||||| ||  ||||    
T  6259643 aataaattgcaaaaaatgatctgaagttgattgagaatcgacccctaccactcctagccatgctcgcaccaatggccataaagcaccaaaagttacacaa 6259742  T
Q  155 gacaaaaataaatgat 170  Q
    |||||||| |||||||    
T  6259743 gacaaaaacaaatgat 6259758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 47623192 - 47623119
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| || |||||||| || ||||||||||| ||||| ||||| | ||| ||||||||||||||||||||    
T  47623192 gtaggtaagcggtccctcaaaagccgccaagcaagaatagatactttgagaggtacctgtttatgccaaattaa 47623119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 22191875 - 22191823
Alignment:
Q  275 agtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||| ||||||||| |||||||| || ||||||||||||||||||||||||||    
T  22191875 agtctccaagcaagaatagaaaccttcaaaggaacctgtttatgccaaattaa 22191823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 37297865 - 37297802
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgaga 80  Q
    ||||| |||||| | ||||||||||||| || |||||||||||||| ||||||||||| |||||    
T  37297865 aataaagatcgatgagatttcaaaccacctgtatattcaataaattacacaaaatgatctgaga 37297802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 47623421 - 47623263
Alignment:
Q  23 gatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgca 122  Q
    |||||||| |||||||||| ||  ||||| | ||||||||||| |||||| |  |  |||   ||||||||  | ||||| || || |||||  ||| ||    
T  47623421 gatcgacgtgatttcaaactaccagcatactgaataaattgcaaaaaatggtccgccataaactgagaatcagcgccttcaacccccagccactccctca 47623322  T
Q  123 ccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttca 181  Q
    |||||| ||| || |||||||||| ||| ||||||| ||| || |||||||||||||||    
T  47623321 ccaaagaccataaggcaccaaaaaatgggcaagacagaaacaagtgattcacatcttca 47623263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 51993856 - 51993776
Alignment:
Q  241 caaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgcca 321  Q
    |||||| | ||||||||||||||||||||| | ||  ||||||||||||   | |||||||| ||| |||||||| |||||    
T  51993856 caaattggctttagtaggtaaacgatcccttatcaaccgccaagcaagggctgtaacttttagaggtacctgtttgtgcca 51993776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 279; Significance: 1e-156; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 12697601 - 12697911
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  12697601 aataatgattgacgcgatttcaaaccacctgcatattcaataaattgcacaaagtgatcggagatagtatgagaatcgaccccttcgacaccaagccaag 12697700  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12697701 cccgcaccaaaggccataatgcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 12697800  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12697801 cacagctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 12697900  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  12697901 tgccaaattaa 12697911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 23 - 327
Target Start/End: Original strand, 8360894 - 8361198
Alignment:
Q  23 gatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgca 122  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  8360894 gatcgacgcgatttcaaaccacctgcatattcaataaattgaacaaaatgatctgagatagcatgagaatctaccccttcgacaccaagccaagcccgca 8360993  T
Q  123 ccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatc 222  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||      
T  8360994 ccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccacatcccgatacacaaaaccgattttcaacaga 8361093  T
Q  223 tataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaa 322  Q
    |||||| |||||| ||||||||||||||||| |||||||||||| ||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  8361094 tataattccacgtgccaccaaatttgatttactaggtaaacgattcctcagcagtcgccaaacaaggatagaaacttttaagggaacctgtttatgccaa 8361193  T
Q  323 attaa 327  Q
    |||||    
T  8361194 attaa 8361198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 249
Target Start/End: Complemental strand, 4548571 - 4548339
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4548571 aataatgatcgacgcgatttcaaaccacctgcatattcaataaattgcacaaaatgatctgagatagtatgagaatcgaccccttcgacaccaagccaag 4548472  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||| ||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4548471 cccacaccagaggccacaatgcaccaaaaattgggcaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 4548372  T
Q  217 cacatctataatcccacgttccaccaaatttga 249  Q
    |||| ||||||||||||||||||||||||||||    
T  4548371 cacagctataatcccacgttccaccaaatttga 4548339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 20002506 - 20002823
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| ||||||||  ||||||| |||| | ||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| || ||||||| |    
T  20002506 aataaagatcgacggaatttcaagccacctacatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccttcggcatcaagccatg 20002605  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| ||||||||| ||||| |||| ||||||||||||||| | |||||||||||||||||| ||||| |||||||| ||||||||||||   ||    
T  20002606 cccgcaccataggccacaatgcaccgaaaaatggacaagacaaaaacatatgattcacatcttcaacatgcccacatcccgtgacacaaaaccgagcctc 20002705  T
Q  217 caca-tc------tataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaac 309  Q
    |||| ||      | |||| ||||| ||  |||| || ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||    
T  20002706 cacagtccacagatgtaatgccacggtctgccaagttggatttagtaggtaaacgatccctcaacagccgccaagcaatgatagaaacttttaaaagaac 20002805  T
Q  310 ctgtttatgccaaattaa 327  Q
    ||||||||||||||||||    
T  20002806 ctgtttatgccaaattaa 20002823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 26 - 321
Target Start/End: Complemental strand, 54483502 - 54483207
Alignment:
Q  26 cgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcacca 125  Q
    ||||||||||||||  |||  ||||||| ||||||||||| ||||||||   ||  || ||||||||| |||||| | |||||||| ||| |||||||||    
T  54483502 cgacgcgatttcaaggcaccagcatattgaataaattgcataaaatgatcaaagggagcatgagaatctacccctactacaccaagtcaatcccgcacca 54483403  T
Q  126 aaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctat 225  Q
     |||||||||||||||||| | ||||||||||||||| ||||||  |||||||||||| ||||| |||||||| ||||||| || |   ||||    ||     
T  54483402 taggccacaaagcaccaaagaatggacaagacaaaaacaaatgagacacatcttcaacatgcccacatcccgtgacacaaagcctagcctccatcgataa 54483303  T
Q  226 aatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgcca 321  Q
    ||| || || |    |||||| | ||||||||||||||||||||||||||  |||||||||| ||  | |||||||| ||| |||||||| |||||    
T  54483302 aatgccgcgatttgtcaaattggttttagtaggtaaacgatccctcaacaaccgccaagcaaagactgtaacttttagaggtacctgtttgtgcca 54483207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 55725945 - 55725827
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||| | |||||||| || | |||||||||||||||||||| |||||||| ||| |||||| ||||||| ||||||||||||||||||||||    
T  55725945 aataaggatcgatgggatttcaagcctcctgcatattcaataaattgcataaaatgatctgaaatagtaagagaatctaccccttcgacaccaagccaag 55725846  T
Q  117 cccgcaccaaaggccacaa 135  Q
    ||||||||| |||||||||    
T  55725845 cccgcaccataggccacaa 55725827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 46 - 327
Target Start/End: Original strand, 7403730 - 7404011
Alignment:
Q  46 tgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaa 145  Q
    |||||| | ||||||||||| |||||||| |||  | |  ||||| ||||||||| | || || ||||| |||| |||||| ||||| || |||| ||||    
T  7403730 tgcataattaataaattgcaaaaaatgatctgaagttgattgagagtcgacccctaccactccgagccatgcccacaccaatggccataaggcactaaaa 7403829  T
Q  146 attggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaat 245  Q
     |||||||||||||||| |||||||| ||||||||||| | ||||||||| |  ||||| |||||    |||| |  || ||| ||||| |   ||||||    
T  7403830 gttggacaagacaaaaacaaatgattgacatcttcaacgttcccgcatccagagacacacaaccgcgcctccaaacgtaaaatgccacggtttgccaaat 7403929  T
Q  246 ttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |   ||| |||||||| ||||||||||  |||||||||||||||||||| ||||| ||| |||| |||||||||||||||||    
T  7403930 tcttttttgtaggtaaccgatccctcagaagtcgccaagcaaggatagagactttgaaatgaacttgtttatgccaaattaa 7404011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 45472824 - 45472751
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45472824 gtaggtaaacgatccctcaacagtcgccaaacaaggatagaaacttttaaaggaacctgtttatgccaaattaa 45472751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 327
Target Start/End: Complemental strand, 2822383 - 2822079
Alignment:
Q  23 gatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgca 122  Q
    ||||||||||||||||| |||| |||||||| ||||||||||| ||||||||  ||   || | ||||||| |||||||  |||||||||||||||||||    
T  2822383 gatcgacgcgatttcaagccacctgcatattgaataaattgcataaaatgatccgaaggagcaggagaatctacccctttaacaccaagccaagcccgca 2822284  T
Q  123 ccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatc 222  Q
    ||| ||||||||||||||| || |  ||||| || ||||| | ||||  |||||||||||| ||||| ||| |||| || |||| || |   ||||        
T  2822283 ccataggccacaaagcaccgaagaacggacatgataaaaacacatgagacacatcttcaacatgcccacattccgtgacgcaaagcctagcctccatcgg 2822184  T
Q  223 tataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaa 322  Q
    || ||| ||  | |    || ||| | |||||||||||| ||||||||||||| |||||||||| |||  |||||||||| ||| |||||||| |||||     
T  2822183 taaaattccgtgatttgtcagattagctttagtaggtaagcgatccctcaacaatcgccaagcatggactgaaacttttagaggtacctgtttgtgccag 2822084  T
Q  323 attaa 327  Q
    |||||    
T  2822083 attaa 2822079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 85 - 206
Target Start/End: Original strand, 48311951 - 48312072
Alignment:
Q  85 atgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacc 184  Q
    ||||||||| |||||||| |||||||||||| ||| ||||| ||||||||||||||| || | ||||||||| ||||| ||||||  ||||||||||||     
T  48311951 atgagaatctaccccttctacaccaagccaatcccacaccataggccacaaagcaccgaagaatggacaagataaaaacaaatgagacacatcttcaaca 48312050  T
Q  185 tgcccgcatcccgttacacaaa 206  Q
    ||||| |||||||| |||||||    
T  48312051 tgcccacatcccgtgacacaaa 48312072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 327
Target Start/End: Complemental strand, 1828823 - 1828582
Alignment:
Q  86 tgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacct 185  Q
    ||||||||||||||| | || || ||||| || |||||||| || || |||||||||||| ||| |||||||||||| |||||||  ||||||||||| |    
T  1828823 tgagaatcgacccctaccactcctagccatgctcgcaccaatggtcataaagcaccaaaagttgcacaagacaaaaacaaatgatcaacatcttcaacat 1828724  T
Q  186 gcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagc 285  Q
     ||| || || |  ||||| |||||    |||| |  || ||| ||||| |   ||||||| | ||| |||||||| | ||| | ||| |||| ||||||    
T  1828723 tcccacacccagaaacacacaaccgcgcctccaaaggtaaaatgccacggtttgccaaattagtttttgtaggtaacctatctcgcaatagtctccaagc 1828624  T
Q  286 aaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||||| ||||| | ||||||||||||||||||||||||    
T  1828623 aaggatagatactttgagaggaacctgtttatgccaaattaa 1828582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 327
Target Start/End: Complemental strand, 55725815 - 55725728
Alignment:
Q  240 ccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||  |||| |||||||| ||||||||||| || |||||||||||||| |||||||||| |||||| |||||||||||||||||    
T  55725815 ccaaattgtattttgtaggtaagcgatccctcaatagccgccaagcaaggattgaaacttttagaggaacttgtttatgccaaattaa 55725728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 327
Target Start/End: Complemental strand, 13271142 - 13270933
Alignment:
Q  118 ccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttcc 217  Q
    ||||||||  ||||| || ||||||||| ||| ||||||||||||||||| | | |||||||| ||   ||| ||||| || || || ||||| |  |||    
T  13271142 ccgcaccatcggccataatgcaccaaaagttgcacaagacaaaaataaattagtaacatcttcgacaatcccacatccagtaactcataaccgctcctcc 13271043  T
Q  218 acatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttat 317  Q
    |||  || ||| ||||| |   |||||||   ||| |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||    
T  13271042 acagatagaatgccacgatttgccaaattaagttttgtaggtaaccgatccctcattagtcgccaagcaaggatagagactttgagagggacctgtttat 13270943  T
Q  318 gccaaattaa 327  Q
    ||||||||||    
T  13270942 gccaaattaa 13270933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 327
Target Start/End: Complemental strand, 47686218 - 47685937
Alignment:
Q  46 tgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaa 145  Q
    |||||| | |||||||||||| ||||||| |||  | |  ||||| ||||||||| | || || | |||| |||||||||  ||||| || |||| ||||    
T  47686218 tgcataattaataaattgcaccaaatgatctgaagttgattgagagtcgacccctaccactcctaaccaatcccgcaccatcggccataatgcactaaaa 47686119  T
Q  146 attggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaat 245  Q
     ||| |||||||||||| ||| ||   |||||||| || | ||| ||||| |  ||||| ||||| |  ||||||  || ||| ||||| |   ||||||    
T  47686118 gttgcacaagacaaaaacaaacgagaaacatcttcgacattcccacatccagaaacacataaccgctcctccacagataaaatgccacggtttgccaaat 47686019  T
Q  246 ttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |   ||| |||||||| ||||| ||||| |||||||||||||||||||| ||||| | ||||||||||||||| ||||||||    
T  47686018 tatgttttgtaggtaaccgatctctcaaaagtcgccaagcaaggatagatactttgagaggaacctgtttatgtcaaattaa 47685937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 327
Target Start/End: Original strand, 15740047 - 15740319
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    ||||||||||| |||||||| |||  | |  ||||||||||||||| | || || ||||| || |||||||| ||||| || ||||||||| || |||||    
T  15740047 aataaattgcaaaaaatgatctgaagttgattgagaatcgacccctaccactcctagccatgctcgcaccaatggccataaggcaccaaaagttagacaa 15740146  T
Q  155 gacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttag 254  Q
    |||||||| |||||||| ||||||| ||| | ||| || || |  ||||| |||||    |||| |  || ||| |||||      ||||||   ||| |    
T  15740147 gacaaaaacaaatgattaacatctttaacattcccacacccagaaacacacaaccgcgcctccaaaggtaaaatgccacggcttgtcaaattattttttg 15740246  T
Q  255 taggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||| ||||| | ||| |||| ||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  15740247 taggtaaccgatctcgcaaaagtctccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 15740319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 19755292 - 19755365
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||| ||||  |||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  19755292 gtaggtaaccgatctctcaggagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 19755365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 19784514 - 19784441
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||| ||||  |||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  19784514 gtaggtaaccgatctctcaggagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 19784441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 23642706 - 23642633
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  23642706 gtaggtaaccgatccctcattagtcgccaagcaaggatagagactttgagagggacctgtttatgccaaattaa 23642633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 47418829 - 47418902
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  47418829 gtaggtaaccgatccctcagtagtcgccaagcaaggatagatactttgagagggacctgtttatgccaaattaa 47418902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 11587446 - 11587375
Alignment:
Q  121 caccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgca 192  Q
    |||||| |||||||||||||||||| |||| ||||||||||| || |||||||||| |||||| ||| ||||    
T  11587446 caccaatggccacaaagcaccaaaatttgggcaagacaaaaacaagtgattcacattttcaacgtgctcgca 11587375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 5148449 - 5148515
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatag 83  Q
    ||||| |||||||| |||||||| |||| |||||||||||||||||||||| ||| || ||||||||    
T  5148449 aataaagatcgacgggatttcaagccacctgcatattcaataaattgcacagaataatttgagatag 5148515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 327
Target Start/End: Complemental strand, 11587327 - 11587240
Alignment:
Q  240 ccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||||  ||| ||||||||||||| |||||  || ||||||||||| ||||| ||||| | ||| | || |||||||||||||||    
T  11587327 ccaaattttctttcgtaggtaaacgattcctcagaagccgccaagcaagaatagatactttgataggtatctatttatgccaaattaa 11587240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 323
Target Start/End: Original strand, 136457 - 136502
Alignment:
Q  278 cgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaa 323  Q
    |||||||||| ||||||||||||  |||||||||| ||||||||||    
T  136457 cgccaagcaaagatagaaactttagaaggaacctgcttatgccaaa 136502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 5790211 - 5790134
Alignment:
Q  250 tttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||||||||||||||| ||| ||| | ||| ||||  ||||| ||||| | ||| || |||||||||||||||||    
T  5790211 tttagtaggtaaacgatccttcatcaggcaccacgcaaaaatagatactttaagaggtacttgtttatgccaaattaa 5790134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Complemental strand, 19740305 - 19740236
Alignment:
Q  104 acaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattca 173  Q
    |||||||||||||| |||||||  | |||||| ||||||||    |||||||||||||||| ||||||||    
T  19740305 acaccaagccaagctcgcaccatcgaccacaacgcaccaaagtaaggacaagacaaaaatagatgattca 19740236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 324
Target Start/End: Original strand, 46145686 - 46145770
Alignment:
Q  240 ccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaat 324  Q
    ||||||||  |||||||||||| || ||||||| ||  ||||||||||  ||||| ||||| ||||| |||| ||| ||||||||    
T  46145686 ccaaattttgtttagtaggtaatcggtccctcagcaagcgccaagcaaaaatagacactttcaaaggcacctatttgtgccaaat 46145770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 48312107 - 48312187
Alignment:
Q  241 caaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgcca 321  Q
    |||||| | ||||||||||||| ||||||||||||  | |||||||||||  | |||||||| | | |||||||| |||||    
T  48312107 caaattggctttagtaggtaaatgatccctcaacaacccccaagcaaggactgtaacttttagatgtacctgtttgtgcca 48312187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 275; Significance: 1e-154; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 12342577 - 12342268
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  12342577 aataatgatcgacgcgatttcaaaccacctgcatattcaataaattgcacaaaatgatctgagatagtatgagaatcgacctcttcgacaccaagccaag 12342478  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12342477 cccgcaccaaaggccacaatgcaccaaaaattggacaagagaagaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 12342378  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12342377 cacagctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaa-gaacctgttta 12342279  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  12342278 tgccaaattaa 12342268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 11203607 - 11203917
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| |||| |||||| ||||| ||||||||||||||||    
T  11203607 aataatgatcgacgcgatttcaaaccacctgcatattcaataaattgcacaaagtgatctgagatggtattagaatcaaccccgtcgacaccaagccaag 11203706  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11203707 cccgcaccaaaggccacaatgaaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 11203806  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11203807 cacagctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaagtatagaaacttttaaaggaacctgttta 11203906  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  11203907 tgccaaattaa 11203917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 29524097 - 29523787
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  29524097 aataatgatcgacacgatttcaaaccacctgcatattcaataaattgcacaaaatgatctgagatattatgagaatcgaccccttcgacaccaagccaag 29523998  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  29523997 cccacaccaaaggccacaatgcaccaaaaattggacaagacaagaataaatgattcacatctttaacctgcctgcatcccgttacacaaaaccgattttc 29523898  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29523897 cacagctataatcccacgtgccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 29523798  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  29523797 tgccaaattaa 29523787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 33496335 - 33496645
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||||||| ||||||||| ||||||||||||||||||||||    
T  33496335 aataaggatcgacgcgatttcaaatcacctgcatattcaataaattgcacaaaatgagctgagatagcatgagaatctaccccttcgacaccaagccaag 33496434  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  33496435 cccgcaccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgtccgcatcccattacacaaaaccgattttc 33496534  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33496535 cacagatataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaatgatagaaacttttaaaggaacctgttta 33496634  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  33496635 tgccaaattaa 33496645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 7031369 - 7031059
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  7031369 aataatgatcgacgcgatttcaagccacctgcatattcaataaattgcacaaagtgatctgacatagtatgagaatcgaccccttcgacaccaagccaag 7031270  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  7031269 cccgcaccagaggccacaaagcaccaaaagtcggacaagacaaaaataaatgattcacatcttcaacctgcccacatcccgttacacaaaaccggttttc 7031170  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    |||| ||| |||||| ||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  7031169 cacagctaaaatccctcgtgccaccaaattagatttagtaggtaagcgatccctcaacagacgccaagcaaggatagaaagttttaaaggaacctgttta 7031070  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  7031069 tgccaaattaa 7031059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 36801427 - 36801117
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  36801427 aataaggatcgacgcgatttcaagccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccttcgacaccaagccaag 36801328  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||    
T  36801327 cccgcaccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgatttacatcttcaacctgcccacatcccgatacacaaaaccgattttc 36801228  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  ||||||| ||| | |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| ||||||| ||||    
T  36801227 cacagatataatctcacatgccaccaaatttgatttagtaggtaaacgatccctcagcagttgccaagcaaggatataaacttttaagggaacctattta 36801128  T
Q  317 tgccaaattaa 327  Q
    ||| |||||||    
T  36801127 tgctaaattaa 36801117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 35214723 - 35214413
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| ||| |||| ||||||||  ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |    
T  35214723 aataaggatggacgagatttcaagtcacgtgcatattcaataaattgcacaaaatgatatgagatagcatgagaatctaccccttcgacaccaagccatg 35214624  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||  |||||||||||||||||| ||  |||    
T  35214623 cccgcaccataggccacaatgcaccaaaaattggacaagacaagaacaaatgattcacatcttcaacatgccaacatcccgttacacaaaactgagcttc 35214524  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||| || ||||||||||||   |||||||||||||||||| ||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  35214523 cacatatagaatcccacgttctggcaaatttgatttagtaggcaaacgatccctcaacatccgccaaacaaggatagaaacttttaaaggaacctgttta 35214424  T
Q  317 tgccaaattaa 327  Q
    ||||| |||||    
T  35214423 tgccagattaa 35214413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 19890466 - 19890776
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||||| |||||||| |||| ||||||||||||| ||||||||||||||| |||||||| | ||||||| ||||| |||||||||| ||| |    
T  19890466 aataaagatcgacgggatttcaagccacctgcatattcaatatattgcacaaaatgatctgagatagcaagagaatctaccccctcgacaccaacccatg 19890565  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
     | |||||| || | |||| ||||| |||||||||||||||||||| | |||| ||  ||||||||| ||||| ||||| || || ||||  ||||  ||    
T  19890566 tctgcaccatagacaacaatgcaccgaaaattggacaagacaaaaacatatgagtcgtatcttcaacatgcccacatcctgtgacgcaaattcgatcctc 19890665  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  | |||| ||||| ||  |||| || |||||||||||||| |||||||||||||  ||| | |||||||| ||||||||||||||||||||||||    
T  19890666 cacaaatgtaatgccacgatctgccaagttggatttagtaggtaatcgatccctcaacaaccgcaatgcaaggatggaaacttttaaaggaacctgttta 19890765  T
Q  317 tgccaaattaa 327  Q
    ||||| |||||    
T  19890766 tgccagattaa 19890776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 11310547 - 11310382
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| ||||| || |||||||| || | |||||||||||||||||||| |||||||| ||| |||| | ||||||| ||||||||||||||||||||||    
T  11310547 aataaggatcggcgggatttcaagcctcctgcatattcaataaattgcataaaatgatctgaaatagcaagagaatctaccccttcgacaccaagccaag 11310448  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaa 182  Q
    || |||||| ||||||||  || |||||| |||| ||||||||||| |||||| ||||||||||||    
T  11310447 cctgcaccataggccacagtgcgccaaaatttgggcaagacaaaaacaaatgagtcacatcttcaa 11310382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 206
Target Start/End: Complemental strand, 48570385 - 48570202
Alignment:
Q  23 gatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgca 122  Q
    ||||||||||||||||| |||| |||||||| ||||||||||| ||||||||  |    || || |||||| ||||||||||||||||||||||||||||    
T  48570385 gatcgacgcgatttcaagccacctgcatattgaataaattgcataaaatgatccgtatgagcattagaatctaccccttcgacaccaagccaagcccgca 48570286  T
Q  123 ccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaa 206  Q
    ||| |||||| |||||||| || |  ||||||| |||||| | ||||  |||||||||||| ||||| |||||||| |||||||    
T  48570285 ccataggccataaagcaccgaagaaaggacaagtcaaaaacatatgagacacatcttcaacatgcccacatcccgtgacacaaa 48570202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 327
Target Start/End: Complemental strand, 26771272 - 26771031
Alignment:
Q  86 tgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacct 185  Q
    |||| ||| |||||||| || |||| |||||||| |||||| ||||| || |||| ||||||||| ||||||||||| || |||||||||||||| || |    
T  26771272 tgaggatcaaccccttcaaccccaaaccaagccctcaccaatggccataaggcactaaaaattgggcaagacaaaaacaagtgattcacatcttccacgt 26771173  T
Q  186 gcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagc 285  Q
    |||| || || || ||||| ||| |    |||| |   || || ||||| |   ||||||||| ||| |||||||||||||||||||| || |||||||     
T  26771172 gcccacaaccagtgacacacaactgcacctccaaaggaatgataccacggtttgccaaatttgctttcgtaggtaaacgatccctcaaaagccgccaagt 26771073  T
Q  286 aaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||| ||||| ||||| | |||| ||||||||||||| |||||    
T  26771072 aagaatagagactttaagaggagcctgtttatgccacattaa 26771031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 327
Target Start/End: Complemental strand, 34333129 - 34332857
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    ||||||||||| |||||||| |||  | |  ||||| ||||||||| | || || ||||| ||||||||||  ||||| || |||| |||| ||  ||||    
T  34333129 aataaattgcaaaaaatgatttgaagttgattgagagtcgacccctaccactcctagccatgcccgcaccattggccataatgcactaaaagttacacaa 34333030  T
Q  155 gacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttag 254  Q
    |||||||| |||||||| ||||||||||| | ||| ||||| |  ||||| |||||    |||| |  || ||| ||||| |   |||||||   ||| |    
T  34333029 gacaaaaacaaatgattaacatcttcaacgttcccacatccagaaacacacaaccgcgcctccaaaggtaaaatgccacggtttgccaaattattttttg 34332930  T
Q  255 taggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||| ||||| ||||  ||| |||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  34332929 taggtaatcgatctctcagaagttgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 34332857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 19920344 - 19920271
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  19920344 gtaggtaaccgatccctcagaagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 19920271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 2364302 - 2364375
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  2364302 gtaggtaaccgatccctcagtagtcgccaagcaaggatagatactttgagagggacctgtttatgccaaattaa 2364375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 7312801 - 7312874
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  7312801 gtaggtaaccgatccctcattagtcgccaagcaaggatagatactttgagaggtacctgtttatgccaaattaa 7312874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 10323686 - 10323613
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  10323686 gtaggtaaccgatccctcagtagtcgccaagcaaggatagatactttgagagggacctgtttatgccaaattaa 10323613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 323
Target Start/End: Complemental strand, 40930811 - 40930574
Alignment:
Q  86 tgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacct 185  Q
    ||||| ||||||||| | || |||||||| ||||||||||  ||||| || |||| |||| ||| |||||||||||| |||||||| |||||||| || |    
T  40930811 tgagagtcgacccctaccactccaagccatgcccgcaccattggccataaggcactaaaagttgaacaagacaaaaacaaatgattgacatcttcgacgt 40930712  T
Q  186 gcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagc 285  Q
     ||| || || |  ||||| |||||    |||| |  || ||  ||||| |   |||||||   ||| |||||||| | ||||||||| |||||||||||    
T  40930711 tcccacaaccagaaacacacaaccgcgcctccaaaggtaaaaggccacggtttgccaaattattttttgtaggtaaccaatccctcaaaagtcgccaagc 40930612  T
Q  286 aaggatagaaacttttaaaggaacctgtttatgccaaa 323  Q
    ||||||||| ||||| | ||||||||||||||| ||||    
T  40930611 aaggatagatactttgagaggaacctgtttatgtcaaa 40930574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 323
Target Start/End: Original strand, 7032343 - 7032412
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaa 323  Q
    |||||||| ||||||||||  |||||||| ||||||||||||| ||| | |||||||||||| |||||||    
T  7032343 gtaggtaaccgatccctcagaagtcgccatgcaaggatagaaattttgagaggaacctgtttgtgccaaa 7032412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 240 - 324
Target Start/End: Original strand, 2755853 - 2755937
Alignment:
Q  240 ccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaat 324  Q
    |||||||| ||||||||||||| || ||||||| ||  ||||||||||  ||||| ||||| ||||| |||||||| ||||||||    
T  2755853 ccaaattttatttagtaggtaaccggtccctcagcaaacgccaagcaaatatagacactttcaaaggtacctgtttgtgccaaat 2755937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 327
Target Start/End: Complemental strand, 17098213 - 17097918
Alignment:
Q  32 gatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggcc 131  Q
    ||||||||||||| ||| || | |||||||||||  ||||| | ||| |||   ||||| ||||||||||| ||||| |||||   | ||||||| | ||    
T  17098213 gatttcaaaccacctgcgtaatgaataaattgcaagaaatggtctgaaataacttgagattcgaccccttcaacaccgagccatatctgcaccaacgacc 17098114  T
Q  132 acaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatccc 231  Q
    |||| |||||||||  ||||||||| | ||| | ||||||||  || ||||| ||||| ||  | |  | ||| |||||    |||| |   ||||||||    
T  17098113 acaacgcaccaaaagatggacaagatagaaacagatgattcaagtcctcaacatgcccacacacggcgatacacaaccgtgcctccatagaaataatccc 17098014  T
Q  232 acgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||| |   ||||||||  |||||||||||| |||||| ||||||||||| |||||| |||||| ||||| | |    |||||||||||||||||||    
T  17098013 acggtttgccaaattttctttagtaggtaaccgatccatcaacagtcgctaagcaaagatagagactttcacatatgcctgtttatgccaaattaa 17097918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 15312604 - 15312681
Alignment:
Q  250 tttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||| |||| ||||||| ||||| ||||| ||||||||  ||| | ||||||| ||| ||||||||||||||||||||    
T  15312604 tttaataggcaaacgattcctcagcagtcaccaagcaaatatatagacttttagaggtacctgtttatgccaaattaa 15312681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 16178969 - 16179046
Alignment:
Q  250 tttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||||||| ||||||| ||| ||| ||||| ||||  ||||| ||||| | ||| ||||||||||||||||||||    
T  16178969 tttagtaggtagacgatccttcatcaggcgccacgcaaaaatagatactttaagaggtacctgtttatgccaaattaa 16179046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 315
Target Start/End: Complemental strand, 48570158 - 48570093
Alignment:
Q  250 tttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttt 315  Q
    ||||||||||||||||||||||||||  ||| |||||||||  |||||||||| ||| | ||||||    
T  48570158 tttagtaggtaaacgatccctcaacaaccgctaagcaaggactgaaacttttagaggtatctgttt 48570093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 324
Target Start/End: Complemental strand, 963292 - 963208
Alignment:
Q  240 ccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaat 324  Q
    ||||||||  |||||||||||| || ||||||| ||  ||||||||||  ||||| ||||| ||||| |||||||| ||||||||    
T  963292 ccaaattttgtttagtaggtaaccggtccctcagcaaacgccaagcaaaaatagacactttcaaaggcacctgtttgtgccaaat 963208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 15312374 - 15312418
Alignment:
Q  20 aatgatcgacgcgatttcaaaccacatgcatattcaataaattgc 64  Q
    |||||||  ||||||||||||||||||||||| | ||||||||||    
T  15312374 aatgatctccgcgatttcaaaccacatgcataatgaataaattgc 15312418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 44887950 - 44888002
Alignment:
Q  275 agtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||| ||| ||||| ||||| || || ||||||||||||||||||||||||||    
T  44887950 agtctccatgcaagaatagacaccttcaaaggaacctgtttatgccaaattaa 44888002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 271; Significance: 1e-151; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 17606686 - 17606376
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  17606686 aataatgatcgacgcgatttcaaaccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcgacaccaagccaag 17606587  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  17606586 cccgcaccaaagaccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgtatcccgttacacaaaatcgattttc 17606487  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17606486 cacagctataattccacgttccaccaaatttgatttagtaggtaaatgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 17606387  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  17606386 tgccaaattaa 17606376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 21630461 - 21630149
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  21630461 aataatgatcgacgcgatttcaaaacacctgcatattcaataaattgcacacaatgatctgaaatagtatgagaatcgaccccttcgacaccaagccaag 21630362  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21630361 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 21630262  T
Q  217 cacatctataatcccacgttccaccaaa--tttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtt 314  Q
    ||||  ||||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |    
T  21630261 cacagatataatcccacgttccaccaaatttttgattttgtaggtaaacgatccctcaatagtcgccaaacaaggatagaaacttttaaaggaacctggt 21630162  T
Q  315 tatgccaaattaa 327  Q
    |||||||||||||    
T  21630161 tatgccaaattaa 21630149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 17579433 - 17579123
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  17579433 aataatgatcgacgcgatttcaagccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcgacaccaagccaag 17579334  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| ||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  17579333 cccgcaccagaggccacaaggcaccaaaagtcggacaagacaaaaataaatgattcacatcttcaacctgcccacatcccgttacacaaaaccggttttc 17579234  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    |||| |||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17579233 cacagctataatccctcgtgccaccaaattagatttagtaggtaagcgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 17579134  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  17579133 tgccaaattaa 17579123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 31 - 327
Target Start/End: Complemental strand, 17573993 - 17573697
Alignment:
Q  31 cgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggc 130  Q
    ||||||||| |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17573993 cgatttcaagccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccagaggc 17573894  T
Q  131 cacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcc 230  Q
    ||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  17573893 cacaaggcaccaaaagtcggacaagacaaaaataaatgattcacatcttcaacctgcccacatcccgttacacaaaaccggttttccacagctataatcc 17573794  T
Q  231 cacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    | ||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17573793 ctcgtgccaccaaattagatttagtaggtaagcgatccctcaacagtcgccaagcaaggatagaatcttttaaaggaacctgtttatgccaaattaa 17573697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 10577584 - 10577291
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |                   
T  10577584 aataaggatcgacgcgatttcaaaccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccgtta------------- 10577498  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
        ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10577497 ----caccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 10577402  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10577401 cacagttataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatataaacttttaaaggaacctgttta 10577302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 20883385 - 20883075
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||||| |||||||| |||| ||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||||||||||||||| |    
T  20883385 aataaagatcgacgggatttcaagccacctgcatattcaataaattgcacaaaatggtctgagatagcatgagaatctaccccttcgacaccaagccatg 20883286  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
     |||||||| ||||||||| ||||| |||||||||||||||||||| | |||||||| ||||||||| ||||| |||||||| ||||||||||||   ||    
T  20883285 tccgcaccataggccacaatgcaccgaaaattggacaagacaaaaacatatgattcatatcttcaacatgcccacatcccgtgacacaaaaccgagcctc 20883186  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  |||||| ||||| || ||||| || |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  20883185 cacagatataatgccacgatctaccaagttcgatttagtaggtaaacaatccctcaacagccgccaagcaaggatagaaacttttaaaggaacctattta 20883086  T
Q  317 tgccaaattaa 327  Q
    ||||| |||||    
T  20883085 tgccagattaa 20883075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 11462201 - 11462486
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||||| ||||| || |||| ||||||||||||||||||||||||||||| |||||||  ||||||||| |||||||||||||||||||| |    
T  11462201 aataaagatcgacgagattttaagccacctgcatattcaataaattgcacaaaatgatctgagataacatgagaatctaccccttcgacaccaagccatg 11462300  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| |||| |||| ||||| |||||||||||||||||||| | |||||||||||||||||| ||||| |||||||| ||| |||||||| | ||    
T  11462301 cccgcaccataggc-acaatgcaccgaaaattggacaagacaaaaacatatgattcacatcttcaacatgcccacatcccgtgacaaaaaaccgagtctc 11462399  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaa 303  Q
    | ||| |||||| ||||| ||  |||| || ||||||||||||||| |||||||||||||  ||||||||||||| |||||||||||    
T  11462400 cgcatatataatgccacgatctgccaagttggatttagtaggtaaaagatccctcaacagctgccaagcaaggattgaaacttttaa 11462486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 14513909 - 14513791
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  14513909 aataatgatcgacgcgatttcaagccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcgacaccaagccaag 14513810  T
Q  117 cccgcaccaaaggccacaa 135  Q
    ||||||||| |||||||||    
T  14513809 cccgcaccagaggccacaa 14513791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 215191 - 215290
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| |||| |||||||| ||||||| |||||    
T  215191 aataaggatagacgcgatttcaaaccacctgcatattcaataaattgcacaaaatgatctgagatagcatgaaaatctaccccttcaacaccaaaccaag 215290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 327
Target Start/End: Complemental strand, 14373340 - 14373033
Alignment:
Q  20 aatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagccc 119  Q
    ||||||||||| |||||||||| ||  ||||| | ||||||||||| ||||||||  |  ||||  |||||||| || ||| | || || ||||   |||    
T  14373340 aatgatcgacgtgatttcaaactaccagcatactgaataaattgcaaaaaatgattcgtcatagactgagaatcaacgcctacaacccccagccgctccc 14373241  T
Q  120 gcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccac 219  Q
    ||||||||| ||| || |||||||||| ||||||||||||||| |||||||| ||||||||| | |||||  | || |  ||||| |||||    ||||     
T  14373240 gcaccaaagaccataaggcaccaaaaaatggacaagacaaaaacaaatgatttacatcttcatcatgcccataaccggaaacacacaaccgcccctccat 14373141  T
Q  220 atctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgc 319  Q
    |   ||||| ||||| |   ||||||||  ||| |||||||| |  | |||||| ||  |||||||||| ||||| ||||||| ||| ||||||||||||    
T  14373140 agaaataatgccacggtttgccaaatttcctttcgtaggtaagccgttcctcaaaagctgccaagcaagaatagatacttttagaggtacctgtttatgc 14373041  T
Q  320 caaattaa 327  Q
    ||||||||    
T  14373040 caaattaa 14373033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 12734150 - 12734223
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  12734150 gtaggtaaccgatccctcagaagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 12734223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 327
Target Start/End: Complemental strand, 15959088 - 15958855
Alignment:
Q  95 accccttcgacaccaagccaagcc-cgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcat 193  Q
    |||||||| || |||||||||||| | |||||| ||||| || |||||||||||||| ||||| ||||| || |||||||||||||| || ||||| ||     
T  15959088 accccttcaaccccaagccaagcctctcaccaatggccataaggcaccaaaaattgggcaagataaaaacaagtgattcacatcttccacgtgcccacaa 15958989  T
Q  194 cccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatag 293  Q
     | || ||||| ||| |    |||| |   || || ||| | |   ||||||||| ||| ||||||||| |||||||||| || ||||||||||| ||||    
T  15958988 tcagtgacacacaactgcacctccaaaggaatgataccatggtttgccaaatttgctttcgtaggtaaatgatccctcaaaagccgccaagcaagaatag 15958889  T
Q  294 aaacttttaaaggaacctgtttatgccaaattaa 327  Q
    | ||||| | |||||||||||||||||| |||||    
T  15958888 agactttaagaggaacctgtttatgccatattaa 15958855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 18651349 - 18651276
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  18651349 gtaggtaaccgatccctcagaagtcgccaagcaaggatagagactttgagaggaacctgtttatgccaaattaa 18651276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 327
Target Start/End: Complemental strand, 24767747 - 24767466
Alignment:
Q  46 tgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaa 145  Q
    |||||| | ||||||||||| |||||||| |||  | |  ||||| ||||||||| | || || ||||| ||||||||||| || || || |||| ||||    
T  24767747 tgcataattaataaattgcaaaaaatgatctgaagttgattgagagtcgacccctaccactccgagccatgcccgcaccaatggtcataaggcactaaaa 24767648  T
Q  146 attggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaat 245  Q
     |||||||||||||||| |||| ||| ||||||||||| | |||||| ||    ||||| |||||    |||| |  || ||| ||||| |   ||||||    
T  24767647 gttggacaagacaaaaacaaattattaacatcttcaacgttcccgcaaccaaaaacacacaaccgcgcctccaaaggtaaaatgccacgatttgccaaat 24767548  T
Q  246 ttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |   ||| |||||||| |||||||| |  ||||| |||||||||||||| ||||| | |||||||||||||||| |||||||    
T  24767547 tattttttgtaggtaaccgatccctaagaagtcgtcaagcaaggatagagactttgataggaacctgtttatgcaaaattaa 24767466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 2553662 - 2553735
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| |||||  |||| |||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  2553662 gtaggtaaccgatctttcaaaagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 2553735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 183
Target Start/End: Original strand, 21168051 - 21168179
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    ||||||||||| |||||||| |||  | |  ||||||||||||||  | || || ||||| || |||| ||| ||||| |||||||||||| ||  ||||    
T  21168051 aataaattgcaaaaaatgatctgaagttgattgagaatcgacccccaccactcctagccatgctcgcatcaatggccataaagcaccaaaagttacacaa 21168150  T
Q  155 gacaaaaataaatgattcacatcttcaac 183  Q
    |||||||| | |||||| |||||||||||    
T  21168151 gacaaaaacatatgattaacatcttcaac 21168179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 324
Target Start/End: Original strand, 13937711 - 13937795
Alignment:
Q  240 ccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaat 324  Q
    ||||||||  |||||||||||| || ||||||| ||  ||||||||||  ||||| ||||| ||||| |||||||| ||||||||    
T  13937711 ccaaattttgtttagtaggtaaccggtccctcagcaaacgccaagcaaaaatagacactttcaaaggcacctgtttgtgccaaat 13937795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 183
Target Start/End: Original strand, 2553494 - 2553591
Alignment:
Q  86 tgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaac 183  Q
    |||||||||||||||   || || ||||| ||||||||||  || || || |||| |||| ||  |||||||||||| |||||||| |||||||||||    
T  2553494 tgagaatcgacccctatcactcctagccatgcccgcaccattggtcataatgcactaaaagttacacaagacaaaaacaaatgattaacatcttcaac 2553591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 17330837 - 17330906
Alignment:
Q  104 acaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattca 173  Q
    ||||| ||||| ||||||| |||||||||||  |||||||||    ||||||||||||| ||||||||||    
T  17330837 acaccgagccatgcccgcatcaaaggccacagcgcaccaaaatactgacaagacaaaaacaaatgattca 17330906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 21168224 - 21168297
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| |||||   ||| |||| |||||| |||||||| ||||| | |||||||| |||||||||||||||    
T  21168224 gtaggtaatcgatcttgcaaaagtctccaagctaggatagatactttgagaggaacctatttatgccaaattaa 21168297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 327
Target Start/End: Original strand, 33185446 - 33185534
Alignment:
Q  239 accaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||||||||||  ||||||| || ||||| | || ||| |||||||  ||||| ||||| | ||| || |||||||||||||||||    
T  33185446 accaaatttgattttataggtaatcgttccctaagcattcgtcaagcaaaaatagagactttcagagggacatgtttatgccaaattaa 33185534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 27766831 - 27767140
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||    
T  27766831 aataatgatcgacgcgatttcaaaacacctgcatattcaataaattgcacacaatgatctgaaatagtatgagaatcgaccccttcgacaccaagccaag 27766930  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27766931 cctgcac-aaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 27767029  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27767030 cacatatataatcccacgttccaccaaatttgattttgtaggtaaacgatccctcaacagtcgccaagcaaggatataaacttttaaaggaacctgttta 27767129  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  27767130 tgccaaattaa 27767140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 8300534 - 8300224
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  8300534 aataatgatcgacgtgatttcaagccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcgacaccaagccaag 8300435  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    |||||| || ||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  8300434 cccgcatcagaggccacaaggcaccaaaagtcggacaagacaaaaataaatgattcacatcttcaacctgcccacatcccgttacacaaaaccggttttc 8300335  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    |||| |||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8300334 cacagctataatccctcgtgccaccaaattagatttagtaggtaagcgatccctcaacagtcgccaaacaaggatagaaacttttaaaggaacctgttta 8300235  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  8300234 tgccaaattaa 8300224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 25857776 - 25857466
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  25857776 aataatgatcgacgcgatttcaagccacctgcatattcaataaattgcacaaagtgatctgagatagtatgagaatcgaccccttcgacaccaagccaag 25857677  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| ||||||||| ||||||||| |   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  25857676 cccgcaccagaggccacaaggcaccaaaagtcaaacaagacaaaaataaatgattcacatcttcaacctgcccacatcccgttacacaaaatcggttttc 25857577  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    |||| |||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25857576 cacagctataatccctcgtgccaccaaattagatttagtaggtaagcgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 25857477  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  25857476 tgccaaattaa 25857466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 33385726 - 33385416
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| ||||| ||||||||||| |||| | |||| |||||||||||||||||||||| |||||||| ||||||||| || | |||||||||||||||||    
T  33385726 aataaggatcggcgcgatttcaagccacctacataatcaataaattgcacaaaatgatctgagatagcatgagaatctactcattcgacaccaagccaag 33385627  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  33385626 cccacaccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccacatcccgatacacaaaaccgattttc 33385527  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33385526 cacagatataattccacgtgccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaagggaacctgttta 33385427  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  33385426 tgccaaattaa 33385416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 125 - 327
Target Start/End: Original strand, 10776660 - 10776862
Alignment:
Q  125 aaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatcta 224  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||  ||    
T  10776660 aaaggccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacttgcccacatcccgatacacaaaaccgattttccacagata 10776759  T
Q  225 taatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaat 324  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10776760 taatcccacgtgccaccaaatttgatttagtaggtaaacgatccctcagcagtcgccaagcaaggatagaaacttttaagggaacctgtttatgccaaat 10776859  T
Q  325 taa 327  Q
    |||    
T  10776860 taa 10776862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 23 - 319
Target Start/End: Complemental strand, 18359436 - 18359142
Alignment:
Q  23 gatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgca 122  Q
    |||||||| |||||||| |||| ||| |||| |||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||| ||||||     
T  18359436 gatcgacgagatttcaagccacctgcgtatttaataaattgcacaaaatgatctgagatagcatgagaatctaccc-ttcgacaccaagccatgcccgcc 18359338  T
Q  123 ccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatc 222  Q
    ||| ||||||||| ||||| ||||| |||||||||||||| | |||||||||||||||||| |||||  ||||||| |||||||||||||  |||||||     
T  18359337 ccataggccacaatgcaccgaaaatcggacaagacaaaaacatatgattcacatcttcaacatgcccagatcccgtgacacaaaaccgatcctccacata 18359238  T
Q  223 tataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgc 319  Q
    ||||||  |||| ||  |||| || ||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||    
T  18359237 tataat-gcacgatctgccaagttggatttagtaggtaaacgatccctcaacaaccgccaagcaaggattgaaacttttaaaggaacctgtttatgc 18359142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 129
Target Start/End: Original strand, 10774239 - 10774351
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||| ||||||||| ||||||||||||||||||||||    
T  10774239 aataaggatcgacgcgatttcaagccacctgcatattcaataaattgcacaaaatgatctcagatagcatgagaatctaccccttcgacaccaagccaag 10774338  T
Q  117 cccgcaccaaagg 129  Q
    |||||||||||||    
T  10774339 cccgcaccaaagg 10774351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 55 - 210
Target Start/End: Complemental strand, 19255437 - 19255282
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    ||||||||||| |||||||| |||  | || ||||||||||||||| | || || ||||| ||||||||||| | ||| || ||||||||| ||||||||    
T  19255437 aataaattgcaaaaaatgatctgaagttgtttgagaatcgacccctaccactccgagccatgcccgcaccaatgtccataaggcaccaaaagttggacaa 19255338  T
Q  155 gacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccg 210  Q
    ||||| || |||||||| ||||||||||| ||||||||||| || ||||| |||||    
T  19255337 gacaagaacaaatgattgacatcttcaacgtgcccgcatccagtgacacacaaccg 19255282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 321
Target Start/End: Original strand, 27795280 - 27795575
Alignment:
Q  26 cgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcacca 125  Q
    ||||||||||||||  | |  ||||||| ||||||||||| || |||||   ||  || ||||||||| |||||| | |||||||| ||| |||||||||    
T  27795280 cgacgcgatttcaagactccagcatattgaataaattgcataagatgatccaagggagcatgagaatctacccctactacaccaagtcaatcccgcacca 27795379  T
Q  126 aaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctat 225  Q
     |||||||||||||||||| |  |||||||||||||| ||||||  |||||||||||| ||||| || ||||| ||||| | || |   ||||    ||     
T  27795380 taggccacaaagcaccaaagaaaggacaagacaaaaacaaatgagacacatcttcaacatgcccacagcccgtgacacatagcctagcctccaacggtaa 27795479  T
Q  226 aatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgcca 321  Q
    ||| ||||| |   ||||||| | ||||||||| ||||||||||||||||  |||||||||| ||  | |||||| | ||| |||||||| |||||    
T  27795480 aatgccacgatttgccaaattggctttagtaggcaaacgatccctcaacaaccgccaagcaaagactgtaactttgagaggtacctgtttgtgcca 27795575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 327
Target Start/End: Original strand, 23238265 - 23238482
Alignment:
Q  110 agccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaacc 209  Q
    ||||| || |||||||  ||||| || |||| |||| ||  |||||||||||| |||||||| ||||||||||| | ||| ||||| |  ||||| ||||    
T  23238265 agccatgctcgcaccattggccataatgcactaaaagttacacaagacaaaaacaaatgattaacatcttcaacgttcccacatccagaaacacacaacc 23238364  T
Q  210 gattttccacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaac 309  Q
    |    |||| | ||| ||| ||||| |   |||||||   ||| |||||||| ||||| ||||| |||| ||||||||||||||||||||| | ||||||    
T  23238365 gcgcctccaaagctaaaatgccacggtttgccaaattacttttcgtaggtaaccgatctctcaaaagtctccaagcaaggatagaaactttgagaggaac 23238464  T
Q  310 ctgtttatgccaaattaa 327  Q
    || |||||||||||||||    
T  23238465 ctatttatgccaaattaa 23238482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 28535790 - 28535717
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  28535790 gtaggtaaccgatccctcagaagtcgccaagcaaggatagaaactttgagaggaacctgtgtatgccaaattaa 28535717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 26072913 - 26072990
Alignment:
Q  250 tttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||||||| ||||||||||||||||||||| ||| |||||  ||||| |||||||| | |||||||||||||||    
T  26072913 tttagtaggtaatcgatccctcaacagtcgccaaacaaagatagggactttcaaaggaacatatttatgccaaattaa 26072990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 30732429 - 30732356
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  ||||||||||||| |||||| ||||| | ||||||||||||||||||||||||    
T  30732429 gtaggtaaccgatccctcagaagtcgccaagcaaagatagatactttgagaggaacctgtttatgccaaattaa 30732356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 42513745 - 42513818
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  42513745 gtaggtaaccgatccctcattagtcgccaagcaaggatagagactttgagagggacctgtttatgccaaattaa 42513818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 327
Target Start/End: Original strand, 8227852 - 8228124
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    ||||||||||| |||||||| |||| | | |||||||||||| ||  | || || ||||| || |||||||  ||||| || |||| |||| ||  ||||    
T  8227852 aataaattgcaaaaaatgatctgaggttgaatgagaatcgactcccaccactcctagccatgctcgcaccattggccataatgcactaaaagttacacaa 8227951  T
Q  155 gacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttag 254  Q
    |||||||| |||||||| ||||||||||| | | | ||||| |  ||||| |||||    |||| |  || |||  |||| |   |||||||   ||| |    
T  8227952 gacaaaaacaaatgattaacatcttcaacgttctcacatccagaaacacacaaccgcgcctccaaaggtaaaatgtcacggtttgccaaattacttttcg 8228051  T
Q  255 taggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||| ||||| ||||| |||| ||||||||||||||| ||||| | ||||||||||||||| ||||||||    
T  8228052 taggtaaccgatctctcaaaagtctccaagcaaggatagatactttgagaggaacctgtttatgtcaaattaa 8228124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 327
Target Start/End: Complemental strand, 27117475 - 27117203
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    |||||||||||||||||||| |||  | |  ||||| ||||||||| | || || | |||| ||| |||||  ||||| || || |||||| ||| ||||    
T  27117475 aataaattgcacaaaatgatctgaagttgattgagagtcgacccctaccactcctaaccaatcccacaccatcggccataatgctccaaaagttgcacaa 27117376  T
Q  155 gacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttag 254  Q
    |||||||| ||||||   |||||||| || | ||| || || |  ||||| ||||| |  |||| |  || ||| ||||| |  ||||||||   ||| |    
T  27117375 gacaaaaacaaatgagaaacatcttcgacattcccacagccagaaacacataaccgctcctccatagatagaatgccacggtttaccaaattaagttttg 27117276  T
Q  255 taggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    | ||||| || |||||||  |||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  27117275 tgggtaaccggtccctcagaagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 27117203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 112 - 327
Target Start/End: Original strand, 12825082 - 12825297
Alignment:
Q  112 ccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccga 211  Q
    |||| |||||||||  ||||| || ||||||||| ||| |||||||||||| ||||||   |||||||| ||   ||| ||||| |  ||||| |||||     
T  12825082 ccaatcccgcaccatcggccataatgcaccaaaagttgcacaagacaaaaacaaatgagaaacatcttcgacaatcccacatccagaaacacataaccgc 12825181  T
Q  212 ttttccacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacct 311  Q
    |  ||||||  || ||| ||||| |   |||||||   ||| |||||||| ||||||||||  |||||||||||||||||| | ||||| | |||||| |    
T  12825182 tcctccacagatagaatgccacgatttgccaaattaagttttgtaggtaaccgatccctcagaagtcgccaagcaaggatacatactttgagaggaactt 12825281  T
Q  312 gtttatgccaaattaa 327  Q
    ||||||||||||||||    
T  12825282 gtttatgccaaattaa 12825297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 104 - 327
Target Start/End: Complemental strand, 18090026 - 18089803
Alignment:
Q  104 acaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacac 203  Q
    ||||| |||||| |||  |||||||||||||| || |||||||  || ||||||||||| | ||||||||| || ||||||||||| ||||| | || ||    
T  18090026 acaccgagccaatccctaaccaaaggccacaacgctccaaaaaccgggcaagacaaaaacagatgattcacgtcctcaacctgcccacatccagctaaac 18089927  T
Q  204 aaaaccgattttccacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaa 303  Q
    | || ||    |||| |   | ||||||||| |   ||||||||    |||||||||||||||| ||||| ||||| ||||||| |||||| ||||| ||    
T  18089926 ataatcgtgaatccatagagacaatcccacgatttgccaaattttgcctagtaggtaaacgatctctcaatagtcgtcaagcaaagatagagactttcaa 18089827  T
Q  304 aggaacctgtttatgccaaattaa 327  Q
     || |||||||| |||||||||||    
T  18089826 cggtacctgtttgtgccaaattaa 18089803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 46 - 195
Target Start/End: Original strand, 42927948 - 42928097
Alignment:
Q  46 tgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaa 145  Q
    |||||| | ||||||||||| |||||||| |||  | |  ||||| ||||||||| | || || ||||| ||||||||||| || || || |||| ||||    
T  42927948 tgcataattaataaattgcaaaaaatgatctgaagttgattgagagtcgacccctaccactccgagccatgcccgcaccaatggtcataaggcactaaaa 42928047  T
Q  146 attggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcc 195  Q
     ||||||| ||||| || |||||||| ||||||||||| | |||||||||    
T  42928048 gttggacatgacaagaacaaatgattgacatcttcaacgttcccgcatcc 42928097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 26072692 - 26072834
Alignment:
Q  29 cgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaag 128  Q
    |||||||||||||| | |||||| | |||||||||||  ||||| | ||| |||   ||||| ||||||||||| ||||| ||||| | || |||||| |    
T  26072692 cgcgatttcaaaccgcctgcataatgaataaattgcaagaaatggtctgaaataacctgagattcgaccccttcaacaccgagccatgaccacaccaatg 26072791  T
Q  129 gccacaaagcaccaaaaattggacaagacaaaaataaatgatt 171  Q
    ||||||| |||||||||   |||||||||| ||| | ||||||    
T  26072792 gccacaacgcaccaaaagaaggacaagacagaaacagatgatt 26072834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 180
Target Start/End: Complemental strand, 28535989 - 28535864
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    |||||||||||||||||||| |||  | |  ||||| || |||||| | || |||||||| ||||||||||  ||||| || |||| |||| ||| ||||    
T  28535989 aataaattgcacaaaatgatctgaagttgattgagagtcaacccctaccactccaagccatgcccgcaccattggccataaggcactaaaagttgcacaa 28535890  T
Q  155 gacaaaaataaatgattcacatcttc 180  Q
    |||||||| |||||||  ||||||||    
T  28535889 gacaaaaacaaatgatcgacatcttc 28535864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 31641537 - 31641609
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||| ||| |||||||||||||| |||| |||||||||| |||||||||||||    
T  31641537 gtaggtaaccgatccctcagtagtctccatgcaaggatagaaac-tttagaggaacctgtgtatgccaaattaa 31641609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 35983906 - 35983833
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| |||| |||||  |||||||||||||||||||| ||||| | |||||||||| || ||||||||||    
T  35983906 gtaggtaaccgattcctcagaagtcgccaagcaaggatagatactttgagaggaacctgtgtaagccaaattaa 35983833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 35984114 - 35983980
Alignment:
Q  46 tgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaa 145  Q
    |||||| | ||||||||||| |||||||| |||  | |  ||||| ||||||||| | || ||||| || ||||||||||  ||||| || |||| ||||    
T  35984114 tgcataattaataaattgcataaaatgatctgaagttgattgagagtcgacccctaccactccaagtcatgcccgcaccattggccataaggcactaaaa 35984015  T
Q  146 attggacaagacaaaaataaatgattcacatcttc 180  Q
     ||| |||||||||||| |||||||| ||| ||||    
T  35984014 gttgcacaagacaaaaacaaatgattgacaacttc 35983980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 19255237 - 19255164
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |  ||||||||||||||||| ||||| | || || ||||||||||||||||||    
T  19255237 gtaggtaaccgatccctcagaaaccgccaagcaaggatagatactttgagagaaatctgtttatgccaaattaa 19255164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 173
Target Start/End: Original strand, 33169533 - 33169602
Alignment:
Q  104 acaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattca 173  Q
    |||||||||||||| |||||||  |||||||| ||| ||||    |||||||||||||||||||||||||    
T  33169533 acaccaagccaagctcgcaccatcggccacaacgcatcaaagtacggacaagacaaaaataaatgattca 33169602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 42928152 - 42928229
Alignment:
Q  250 tttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||| |||| ||| ||||||||||  || |||||| |||||||||| ||||| | |||||||||||||| |||||||||    
T  42928152 ttttgtagttaaccgatccctcagaagccgccaaacaaggatagagactttgagaggaacctgtttataccaaattaa 42928229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 324
Target Start/End: Original strand, 33169669 - 33169753
Alignment:
Q  240 ccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaat 324  Q
    ||||||||  |||||||||||| || ||||||| ||  ||||||||||  ||||| ||||| ||||| |||||||| ||||||||    
T  33169669 ccaaattttgtttagtaggtaaccggtccctcagcaaacgccaagcaaaaatagacactttcaaaggcacctgtttgtgccaaat 33169753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 169
Target Start/End: Complemental strand, 27166301 - 27166152
Alignment:
Q  20 aatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagccc 119  Q
    |||||||| |||||||| | ||||| |||||| | | |||||||||  || |||| ||| |||   ||||| || |||||||| | |||||| || ||||    
T  27166301 aatgatcgtcgcgattttataccacctgcataattactaaattgcaagaagtgatctgaaataacctgagagtccaccccttcaaaaccaagtcatgccc 27166202  T
Q  120 gcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatga 169  Q
    ||| |||  ||||||| || || ||| |||||||||||| ||| ||||||    
T  27166201 gcatcaactgccacaacgcgccgaaagttggacaagacagaaacaaatga 27166152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 263; Significance: 1e-146; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 37433920 - 37434230
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  37433920 aataaggatcgacgcgatttcaaaccacccgcatattcaataaattgcacaaaatgatctgagatagcatgagaatcgaccccttcgacacaaagccaag 37434019  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37434020 cccgcaccaaaggccacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 37434119  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  37434120 cacagatataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaagaatagagacttttaaaggaacatgttta 37434219  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  37434220 tgccaaattaa 37434230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 20824084 - 20824394
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  20824084 aataatgattgacgcgatttcaagccacctgcatattcaataaatcgcacaaagtgatctgagatagtatgagaatcgaccccttcgacaccaagccaag 20824183  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  20824184 cccgcaccagaggccacaaagcaccaaaagtcggacaagacaaaaataaatgattcacatcttcaacctgcccacatcccgttacacaaaaccggttttc 20824283  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    |||| |||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20824284 cacagctataatccctcgtgccaccaaattagatttagtaggtaagcgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 20824383  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  20824384 tgccaaattaa 20824394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 2170128 - 2170440
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  2170128 aataaggatcgacgagatttcaagccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccttcgacaccaagccaag 2170227  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaa--accgattt 214  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||  ||||||||    
T  2170228 cccgcaccataggccacaatgcaccaaaaattggacaagacaaaaacaaatgattcacatcttcaacctgcccacaccccgttacacaaaacaccgattt 2170327  T
Q  215 tccacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtt 314  Q
    ||||||  || |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2170328 tccacagatagaatcccacgttctaccaaatttgatttagtaggtaaacgatccctcaacggtcgccaagcaaggatagaaacttttaaaggaacctgtt 2170427  T
Q  315 tatgccaaattaa 327  Q
    ||||||| |||||    
T  2170428 tatgccagattaa 2170440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 17699270 - 17699580
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| ||||| ||| ||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  17699270 aataaggatcggcgcaatttcaagccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccttcgacaccaagccaag 17699369  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| ||||||||    
T  17699370 cccgcaccaaaggtcacaatgcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcctacatcccgatacacaaaatcgattttc 17699469  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  |||||||||| || |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  17699470 cacagatataatcccatgtgccaccaaatttgatatagtaggtaaacgatccctcagcagtcgccaagcaaggatagaaacttttaagggaacctgttta 17699569  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  17699570 tgccaaattaa 17699580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 321
Target Start/End: Original strand, 43270238 - 43270542
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| || ||||| |||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  43270238 aataaggaacgacgagatttcaagccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccttcgacaccaagccaag 43270337  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||  |||    
T  43270338 cccgcaccatagaccacaatgcaccaaaaattggacaagacaaaaacaaatgattcacatcttcaacctgcccacaacccgttacacaaaaccgagcttc 43270437  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  || |||| ||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  43270438 cacagatagaatctcacgttctaccaaatttgttttagtaggcaaacgatccttcaacagtcgccaagtaaggatagaaacttttaaaggaacctgttta 43270537  T
Q  317 tgcca 321  Q
    |||||    
T  43270538 tgcca 43270542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 17 - 300
Target Start/End: Original strand, 2529674 - 2529957
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||||| |||||||| || | |||||||||||||||||||| |||||||| ||| |||| | ||||||| || |||||||||||||||||||    
T  2529674 aataaggatcgacgggatttcaagcctcctgcatattcaataaattgcataaaatgatctgaaatagcaagagaatctactccttcgacaccaagccaag 2529773  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| ||||||||| |  || |||||||| ||||||||||| |||||| ||||||||||||| ||||| || || || ||||||||||||   ||    
T  2529774 cccgcaccataggccacaatgtgccgaaaattgggcaagacaaaaacaaatgagtcacatcttcaacatgcccacaccctgtaacacaaaaccgagcctc 2529873  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttt 300  Q
    || |  || ||| ||||| || ||||||||  |||| |||||||| ||||||||||| || |||||||||||||| ||||||||    
T  2529874 caaaagtagaattccacgatctaccaaattgtattttgtaggtaagcgatccctcaatagccgccaagcaaggattgaaacttt 2529957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 323
Target Start/End: Original strand, 13199911 - 13200217
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| ||||||||  ||||||| || | |||||||||||||||||||| |||||||| ||| |||  | ||||||| ||  ||||||||||||||||||    
T  13199911 aataaggatcgacggaatttcaagcctcctgcatattcaataaattgcataaaatgatctgaaataacaagagaatctacatcttcgacaccaagccaag 13200010  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| ||||||||| || ||||||||||| ||||||||||| | |||| ||||||||||||| ||||| || || || ||||||||||||   ||    
T  13200011 cccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaacatatgagtcacatcttcaacatgcccacacccagtaacacaaaaccgagcctc 13200110  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    || |  || ||| |  || ||  |||||||  |||| |||||||||||||||||||| ||  ||||||||||||| |||||||||| |||||||||||||    
T  13200111 cataggtagaattctgcgctctgccaaattgtattttgtaggtaaacgatccctcaatagctgccaagcaaggattgaaacttttagaggaacctgttta 13200210  T
Q  317 tgccaaa 323  Q
    |||||||    
T  13200211 tgccaaa 13200217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 17 - 261
Target Start/End: Complemental strand, 42177917 - 42177673
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||||| |||||||| |||| ||||||||| ||||||||||||||||||| |||||||  ||||||||| ||||||||||||||||||||      
T  42177917 aataaagatcgacgggatttcaagccacctgcatattcgataaattgcacaaaatgatctgagataacatgagaatctaccccttcgacaccaagccatc 42177818  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    | | ||||| ||||||||| | ||| |||||||||||||| ||||| | |||||||||||||||||| ||||| |||||||| |||||||| ||||  ||    
T  42177817 ctcacaccataggccacaatgtaccgaaaattggacaagagaaaaacatatgattcacatcttcaacatgcccacatcccgtgacacaaaatcgatcctc 42177718  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaa 261  Q
    ||||  | |||| ||||| ||  |||| || ||||||| ||||||    
T  42177717 cacaaatgtaatgccacgatctgccaagttggatttagcaggtaa 42177673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 26 - 287
Target Start/End: Complemental strand, 13879830 - 13879569
Alignment:
Q  26 cgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcacca 125  Q
    ||||||||||||||  | |  ||||||| ||||||||||| ||||||||   ||  || ||||||||| |||||| | |||||||||||| |||||||||    
T  13879830 cgacgcgatttcaagactccagcatattgaataaattgcataaaatgatccaagggagcatgagaatctacccctactacaccaagccaatcccgcacca 13879731  T
Q  126 aaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctat 225  Q
     |||||||||||||||||| |  |||||||||||||| | ||||  |||||||||||| ||||| |||||||| ||||||| || |   ||||    ||     
T  13879730 taggccacaaagcaccaaagaaaggacaagacaaaaacagatgagacacatcttcaacatgcccacatcccgtgacacaaagcctagcctccaacggtaa 13879631  T
Q  226 aatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaa 287  Q
    ||| ||||| |   ||||||| | ||||||||||||||||||||||||||  ||||||||||    
T  13879630 aatgccacgatttgccaaattggctttagtaggtaaacgatccctcaacaaccgccaagcaa 13879569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 23 - 315
Target Start/End: Original strand, 25090181 - 25090473
Alignment:
Q  23 gatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgca 122  Q
    |||||||||||||||||  |||    ||||| ||||||||||| |||||||| ||| | |  ||||||||| |||||||| |||||||||||||||||||    
T  25090181 gatcgacgcgatttcaaggcaccaatatattgaataaattgcataaaatgatctgatagaacatgagaatctaccccttctacaccaagccaagcccgca 25090280  T
Q  123 ccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatc 222  Q
    ||| ||||||||||||||| || | |||||| |||| ||| ||||||  ||||| |||||| ||||| |||||| | ||||||| || |   ||||        
T  25090281 ccataggccacaaagcaccgaagaatggacaggacagaaacaaatgagacacattttcaacatgcccacatcccatgacacaaagcctagcctccatcgg 25090380  T
Q  223 tataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttt 315  Q
     | ||| || || |    |||||| | |||||||||||  |||||||||||||  |||||||||||||| |||||||||| ||| ||||||||    
T  25090381 caaaatgccgcgatttgtcaaattggctttagtaggtagtcgatccctcaacaaccgccaagcaaggattgaaacttttagaggtacctgttt 25090473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 327
Target Start/End: Original strand, 32266390 - 32266662
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    ||||||||||| |||||||| |||| | | |||||||||||| ||  | || || ||||| || |||||||  |||||||| |||| |||| ||  ||||    
T  32266390 aataaattgcaaaaaatgatctgaggttgaatgagaatcgactcccaccactcctagccatgctcgcaccattggccacaatgcactaaaagttacacaa 32266489  T
Q  155 gacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttag 254  Q
    |||||||| |||||||| ||||||||||| | ||| ||||| |  ||||| |||||    |||| |  || ||| ||||| |   |||||||   ||| |    
T  32266490 gacaaaaacaaatgattaacatcttcaacgttcccacatccagaaacacacaaccgcgcctccaaaggtaaaatgccacggtttgccaaattacttttcg 32266589  T
Q  255 taggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||| ||||| ||||| |||| ||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  32266590 taggtaaccgatctctcaaaagtctccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 32266662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 327
Target Start/End: Original strand, 13396245 - 13396486
Alignment:
Q  86 tgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacct 185  Q
    ||||| ||||||||| | || || ||||| ||||||||||  ||||| || |||| |||| ||  |||||||||||| |||||||| ||||||||||| |    
T  13396245 tgagattcgacccctaccactcctagccatgcccgcaccattggccataatgcactaaaagttacacaagacaaaaacaaatgattaacatcttcaacgt 13396344  T
Q  186 gcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagc 285  Q
     ||| ||||| |  ||||| |||||    |||| |  || ||| ||||| |   |||||||   ||| |||||||| ||||| ||||  |||||||||||    
T  13396345 tcccacatccagaaacacacaaccgcgcctccaaaggtaaaatgccacggtttgccaaattattttttgtaggtaaccgatctctcaggagtcgccaagc 13396444  T
Q  286 aaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||||| ||||| | |||||| |||||||||||||||||    
T  13396445 aaggatagatactttgagaggaacttgtttatgccaaattaa 13396486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 5181527 - 5181635
Alignment:
Q  86 tgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacct 185  Q
    ||||| ||||||||| | ||||| ||||| |||  |||||| |||||||| ||||||||| |||| ||||||||||| | ||||||| |||||||||| |    
T  5181527 tgagagtcgacccctaccacaccgagccatgcctacaccaatggccacaaggcaccaaaagttgggcaagacaaaaacatatgattctcatcttcaactt 5181626  T
Q  186 gcccgcatc 194  Q
    |||||||||    
T  5181627 gcccgcatc 5181635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 7924411 - 7924484
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  7924411 gtaggtaaccgatccctcattagtcgccaagcaaggatagagactttgagagggacctgtttatgccaaattaa 7924484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 8299828 - 8299901
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  8299828 gtaggtaaccgatccctcagtagtcgccaagcaaggatagatactttgagagggacctgtttatgccaaattaa 8299901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 327
Target Start/End: Original strand, 9922418 - 9922699
Alignment:
Q  46 tgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaa 145  Q
    |||||| | |||||||||||| ||||||| |||  | |  ||||| || |||||| | || |||||||| || |||||||| ||||| || |||| ||||    
T  9922418 tgcataattaataaattgcactaaatgatctgaagttgattgagagtcaacccctaccactccaagccatgctcgcaccaatggccataaggcactaaaa 9922517  T
Q  146 attggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaat 245  Q
     ||| |||||||||||| |||||||| |||||||| || | ||| || || |  ||||| | |||    |||| |  || ||| ||||| |   ||||||    
T  9922518 gttgcacaagacaaaaacaaatgattgacatcttctacattcccacaaccagaaacacacatccgcgcctccagaggtaaaatgccacggtttgccaaat 9922617  T
Q  246 ttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |   ||| |||||||| ||||||||||  ||||| || ||||||||||||||||| | |||||||||| |||||||||||||    
T  9922618 tatcttttgtaggtaaccgatccctcagaagtcgtcatgcaaggatagaaactttgagaggaacctgtgtatgccaaattaa 9922699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 172131 - 172201
Alignment:
Q  257 ggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||| || |||||||  |||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  172131 ggtaaccggtccctcagaagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 172201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 37434524 - 37434569
Alignment:
Q  97 cccttcgacaccaagccaagcccgcaccaaaggccacaaagcacca 142  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  37434524 cccttcgacaccaagccaagcccgcaccaaaggccacaatgcacca 37434569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 41665461 - 41665411
Alignment:
Q  277 tcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  41665461 tcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 41665411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 34137092 - 34137011
Alignment:
Q  240 ccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgcca 321  Q
    ||||||||  ||| ||||||||||||||| |||  || ||||||||||| ||||| ||||| | ||| ||||||||||||||    
T  34137092 ccaaattttctttcgtaggtaaacgatccatcataagccgccaagcaagaatagagactttgagaggtacctgtttatgcca 34137011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 34137211 - 34137156
Alignment:
Q  121 caccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacat 176  Q
    |||||| |||||||| ||||||||| |||| ||||||||||| || ||||||||||    
T  34137211 caccaatggccacaaggcaccaaaatttgggcaagacaaaaacaagtgattcacat 34137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 42177670 - 42177631
Alignment:
Q  288 ggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  42177670 ggatagaaacttttaaaggaacctgttaatgccatattaa 42177631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 326
Target Start/End: Original strand, 25891077 - 25891163
Alignment:
Q  240 ccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaatta 326  Q
    ||||||| |||||||||||||  ||||| |  | ||||||||| |||| ||| || || |||| ||||||||| |||||||||||||    
T  25891077 ccaaattagatttagtaggtaggcgatcacggagcagtcgccatgcaaagattgacacctttagaggaacctgattatgccaaatta 25891163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 5181698 - 5181767
Alignment:
Q  257 ggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaatta 326  Q
    |||||| ||||||||| | | |||||| |||| ||| | ||||||| ||| |||||||||||||||||||    
T  5181698 ggtaaatgatccctcagccgccgccaaacaagaatatagacttttagaggcacctgtttatgccaaatta 5181767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 41665628 - 41665555
Alignment:
Q  110 agccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaac 183  Q
    ||||| ||||||||||  ||||| || |||| |||| ||  |||||||||||| |||||||| |||||||||||    
T  41665628 agccatgcccgcaccattggccataatgcactaaaagttacacaagacaaaaacaaatgattaacatcttcaac 41665555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 37718861 - 37718945
Alignment:
Q  243 aatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||||| |||||||| ||||| |  | ||| ||||||||||  || || || ||||| |||||||||||||||| ||||||    
T  37718861 aatttgatttggtaggtaagcgatcacggagcagccgccaagcaaaaattgacacctttaagggaacctgtttatgcctaattaa 37718945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 32 - 327
Target Start/End: Original strand, 14439556 - 14439850
Alignment:
Q  32 gatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggcc 131  Q
    |||||||| |||| ||||||||||||||||||||||||||||| | |||||| ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  14439556 gatttcaagccacctgcatattcaataaattgcacaaaatgatctaagatagcatgagaatctaccccttcgacaccaagccaagcccgcaccataggcc 14439655  T
Q  132 acaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatccc 231  Q
    |||| ||| |||||||||||||||||||||  |||||||||||||||||||||| ||| |||||||||||| ||||||||  |||||||  || ||||||    
T  14439656 acaatgcatcaaaaattggacaagacaaaac-aaatgattcacatcttcaacctacccacatcccgttacataaaaccgagcttccacagatagaatccc 14439754  T
Q  232 acgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| |||||    
T  14439755 acgttctaccaaatttgatttagtaggtaaacgatccctcaacagtcgtcaagccaagatagaaacttttaaaggaacctgtttatgccagattaa 14439850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 17 - 327
Target Start/End: Complemental strand, 11000302 - 10999993
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| |    
T  11000302 aataaggatcgacgagatttcaagccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatctaccccttcgacaccaagccatg 11000203  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| ||||||||| |||||||||||||||||||| || || |||||||||||||||||||| ||||| ||| |||||||||||||||||  |||    
T  11000202 cccgcaccataggccacaatgcaccaaaaattggacaagataagaacaaatgattcacatcttcaacatgcccacattccgttacacaaaaccgagcttc 11000103  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  || ||||||||||||  ||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||||    
T  11000102 cacagatagaatcccacgttctgccaaatttgatttagtaggcaaacgatccct-aacagccaccaagcaaggatagaaacttttaaagaaacctgttta 11000004  T
Q  317 tgccaaattaa 327  Q
    || || |||||    
T  11000003 tggcagattaa 10999993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 12645324 - 12645634
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| ||||||||   |||||| || |||||||||||||||||||||  |||||||| ||| |||| | ||||||| ||||||||||||||||||||||    
T  12645324 aataaggatcgacggcgtttcaagcctcatgcatattcaataaattgcgtaaaatgatctgaaatagcaagagaatctaccccttcgacaccaagccaag 12645423  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| ||||||||| || ||||||||||| ||||||||||| |||||| ||||||||||||| ||||| || || || ||||||||||||   ||    
T  12645424 cccgcaccataggccacaatgcgccaaaaattgggcaagacaaaaacaaatgagtcacatcttcaacatgcccacaccctgtaacacaaaaccgagcctc 12645523  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    || |  || ||| |  || ||   ||||||  |||| |||||||| ||||||||||| || |||||||||||||| |||||||||| || ||||||||||    
T  12645524 caaaggtagaattctgcgatctgtcaaattgtattttgtaggtaagcgatccctcaatagccgccaagcaaggattgaaacttttagagaaacctgttta 12645623  T
Q  317 tgccaaattaa 327  Q
    |||||||||||    
T  12645624 tgccaaattaa 12645634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 23 - 206
Target Start/End: Complemental strand, 33516130 - 33515947
Alignment:
Q  23 gatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgca 122  Q
    ||||||||||||||||| |||| | |||||| ||||||||||| ||||||||  |    || ||||||||| ||||||||||||||||||||||||||||    
T  33516130 gatcgacgcgatttcaagccacctacatattgaataaattgcataaaatgatcggtaggagcatgagaatctaccccttcgacaccaagccaagcccgca 33516031  T
Q  123 ccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaa 206  Q
    ||| |||||||||||||||||| |  |||||||||||||| | ||||  |||||||||||| ||||| |||| ||| |||||||    
T  33516030 ccataggccacaaagcaccaaagaaaggacaagacaaaaacatatgagacacatcttcaacatgcccacatctcgtgacacaaa 33515947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 41 - 327
Target Start/End: Original strand, 15917466 - 15917752
Alignment:
Q  41 ccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcac 140  Q
    |||| |||||| | ||||||||||| |||||| | ||| ||||  |||||| |||||||| | ||||  ||||| ||| ||||||| |||||||| || |    
T  15917466 ccacctgcataatgaataaattgcaaaaaatggtctgaaatagcctgagaaccgacccctacaacactgagccatgcctgcaccaatggccacaacgcgc 15917565  T
Q  141 caaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccac 240  Q
    ||||| |||||||||||||||| | |||||||||||||||||| ||||| || || || ||||| |||||   ||||| |   ||||| ||||| |   |    
T  15917566 caaaagttggacaagacaaaaacatatgattcacatcttcaacatgcccacaaccagtgacacacaaccgcacttccaaaggaataataccacgatttgc 15917665  T
Q  241 caaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||   ||| ||||||||||||||||||| ||||| ||||||||||||| | ||||| | |||||||| ||||||| |||||||    
T  15917666 caaattaacttttgtaggtaaacgatccctcagcagtccccaagcaaggatacagactttcagaggaacctatttatgcgaaattaa 15917752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 206
Target Start/End: Original strand, 40176463 - 40176646
Alignment:
Q  23 gatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgca 122  Q
    ||||||| |||||||||  |||   |||||| ||||||||||| ||||||||  |||  || ||||||||| |||||||| |||||||||||| ||||||    
T  40176463 gatcgacacgatttcaaggcaccaacatattgaataaattgcataaaatgatccgagggagcatgagaatctaccccttctacaccaagccaatcccgca 40176562  T
Q  123 ccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaa 206  Q
    ||| ||||||||||||||| || | ||||||| ||||||| ||||||  |||||||||||| ||||| |||||||| |||||||    
T  40176563 ccataggccacaaagcaccgaagaatggacaaaacaaaaacaaatgagacacatcttcaacatgcccacatcccgtgacacaaa 40176646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 327
Target Start/End: Original strand, 41206842 - 41207114
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    ||||||||||| |||||||| |||  | || ||||| || |||||| | || || ||||| ||||||| ||| ||||| || ||||||||| ||||||||    
T  41206842 aataaattgcaaaaaatgatctgaagttgtctgagagtcaacccctaccactccgagccatgcccgcatcaatggccataaggcaccaaaagttggacaa 41206941  T
Q  155 gacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttag 254  Q
    ||||| || |||||||| ||||||||||| ||||||||||| || ||||| |||||    ||||     ||||| ||||| |   |||||||   ||| |    
T  41206942 gacaagaacaaatgattgacatcttcaacgtgcccgcatccagtgacacacaaccgcgcctccaagggaataatgccacgatttgccaaattattttttg 41207041  T
Q  255 taggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||| ||||||||||  || ||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  41207042 taggtaaccgatccctcagaagccgccaagcaaggatagagactttgagaggaacctgtttatgccaaattaa 41207114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 55 - 327
Target Start/End: Original strand, 28252546 - 28252818
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    ||||||||||| |||||| | ||  ||||  | |||||| || ||||| || || |||||  |||||||||||| ||| || |||||||||| |||||||    
T  28252546 aataaattgcaaaaaatggtctgccatagactaagaatcaacaccttcaacccccagccactcccgcaccaaagaccataaggcaccaaaaaatggacaa 28252645  T
Q  155 gacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttag 254  Q
    |||||||| |||||||||||||||||| | || || || || |  ||||| |||||    |||| ||  ||||| ||| | |   ||||||||   || |    
T  28252646 gacaaaaacaaatgattcacatcttcatcatgaccacaaccggaaacacataaccgcccctccatatgaataatgccatggtttgccaaatttcccttcg 28252745  T
Q  255 taggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||| ||||||||||| || ||||||||||| ||||| ||||||| ||| ||||||||||||||||||||    
T  28252746 taggtaagcgatccctcaaaagccgccaagcaagaatagatacttttagaggtacctgtttatgccaaattaa 28252818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 137 - 327
Target Start/End: Complemental strand, 17765194 - 17765004
Alignment:
Q  137 gcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgtt 236  Q
    |||||||||||||| ||||||||||| || |||||||||||||| || || || || || || ||||| |||||    |||| |   || || ||||| |    
T  17765194 gcaccaaaaattgggcaagacaaaaacaagtgattcacatcttccacgtgaccacaaccagtgacacacaaccgcgcctccaaaggaatgataccacggt 17765095  T
Q  237 ccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
       ||||||||| ||| ||||||||| |||||||||| || ||||||||||| ||||| ||||| | |||| ||||||||||||| |||||    
T  17765094 ttgccaaatttgctttcgtaggtaaatgatccctcaatagccgccaagcaagaatagagactttaagaggagcctgtttatgccatattaa 17765004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 4552194 - 4552267
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | |||||||| |||||||||||||||    
T  4552194 gtaggtaaccgatccctcagaagtcgccaagcaaggatagatactttaagaggaacctatttatgccaaattaa 4552267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 250 - 321
Target Start/End: Original strand, 40176689 - 40176760
Alignment:
Q  250 tttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgcca 321  Q
    ||||||||||||||||||||||||||  |||||||||||||  |||||||||| ||| |||||||| |||||    
T  40176689 tttagtaggtaaacgatccctcaacaaccgccaagcaaggactgaaacttttagaggtacctgtttgtgcca 40176760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 38604727 - 38604554
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaa-tgatatgagatagtatgagaatcgaccccttcgacaccaagccaa 115  Q
    ||||| || ||||||| |||||  |||| ||||||||  ||||| |||| |||| |||| | | |||| ||||||||  ||||||| ||| ||||||||     
T  38604727 aataaagagcgacgcgctttcaggccacctgcatattggataaactgcaaaaaaatgatctaaaatagcatgagaatttacccctttgactccaagccag 38604628  T
Q  116 gcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgccc 189  Q
    |||||||||| |||||| ||||  || ||| | |||||  ||||||| | |||||| ||||||||||| |||||    
T  38604627 gcccgcaccataggccataaagtcccgaaagtcggacacaacaaaaacacatgatttacatcttcaacatgccc 38604554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 38604489 - 38604416
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||||||||| || |||||  |||| |||||||| |||||||||| ||| || ||||||||||| |||||    
T  38604489 gtaggtaaacgatctcttaacagcagccatgcaaggattgaaacttttagaggtacttgtttatgccagattaa 38604416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 163; Significance: 5e-87; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 37254546 - 37254856
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||||| |||| ||| |||| ||||||||||||||||||||||||||||| |||||||| ||||||||  |||||||||||||||||||| |    
T  37254546 aataaagatcgacgggattccaagccacctgcatattcaataaattgcacaaaatgatctgagatagcatgagaatttaccccttcgacaccaagccatg 37254645  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||  || || ||| |||| |||||||||||| | ||    
T  37254646 cccgcaccataggccacaatgcaccgaaaattggacaagacaaaaacatatgattcacatcttcaaaatgtccacattccgtgacacaaaaccgagtctc 37254745  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  |||||| ||||  ||  |||| || ||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||| ||||||||||    
T  37254746 cacagatataatgccacaatctgccaagttggatttagtaggtaaacgatccctcaacaaccgccaagcaaggattgaaacttttaaagtaacctgttta 37254845  T
Q  317 tgccaaattaa 327  Q
    ||||| |||||    
T  37254846 tgccagattaa 37254856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 25619247 - 25619557
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||||||| |||||||| |||| ||||||||| ||||||||||||||||||| |||||||| ||||||||| || ||||| |||||||||||      
T  25619247 aataaagatcgacgggatttcaagccacctgcatattcgataaattgcacaaaatgatctgagatagcatgagaatctacaccttcaacaccaagccatt 25619346  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttc 216  Q
    ||||||||  ||||||||| ||||| |||||||||||||||||||| | |||||||||||||||||| ||||| ||||| || |||||||| || |  ||    
T  25619347 cccgcaccttaggccacaatgcaccgaaaattggacaagacaaaaacatatgattcacatcttcaacatgcccacatcctgtgacacaaaatcggtcctc 25619446  T
Q  217 cacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgttta 316  Q
    ||||  |  ||| ||||| ||  |||| || |||||||||||||| || ||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  25619447 cacagatgcaatgccacgatctgccaagttggatttagtaggtaatcgttccctcaacaaccgccaagcaaggatagaaacttttaaaggaacctgttta 25619546  T
Q  317 tgccaaattaa 327  Q
    ||||| |||||    
T  25619547 tgccatattaa 25619557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 169 - 319
Target Start/End: Original strand, 18532568 - 18532718
Alignment:
Q  169 attcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatcc 268  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  || ||| |||||||| |||||| |||||||||||||||||||||||    
T  18532568 attcacatcttcaacctgcccacatcccgttacacaaaaccgattttccacagatagaattccacgttctaccaaaattgatttagtaggtaaacgatcc 18532667  T
Q  269 ctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgc 319  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18532668 ctcaacagtcgccaagcaaggatataaacttttaaaggaacctgtttatgc 18532718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 17 - 173
Target Start/End: Original strand, 18530298 - 18530454
Alignment:
Q  17 aataatgatcgacgcgatttcaaaccacatgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaag 116  Q
    ||||| |||| |||||||||||| |||| ||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||||||||    
T  18530298 aataaggatcaacgcgatttcaagccacctgcatattcaataaattgcacaaaatgatctgatatagcatgagaatctaccccttcgacaccaagccaag 18530397  T
Q  117 cccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattca 173  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  18530398 cccgcaccataggccacaatgcaccaaaaattggacaagacaaaaacaaatgattca 18530454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 327
Target Start/End: Complemental strand, 235762 - 235479
Alignment:
Q  46 tgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaa 145  Q
    |||||| | ||||||||||| |||||||| |||  | |  ||||| ||||||||| | || || ||||| ||||||||||  ||||| || |||| ||||    
T  235762 tgcataattaataaattgcaaaaaatgatctgaatttgattgagagtcgacccctaccactccgagccatgcccgcaccattggccataaggcactaaaa 235663  T
Q  146 attggacaagacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaat 245  Q
     ||| |||||||||||| |||||||| ||||||||||| | | |||| || |  ||||| |||||    |||| |  || ||| ||||| |   ||||||    
T  235662 gttgaacaagacaaaaacaaatgattaacatcttcaacgttctcgcaaccagaaacacacaaccgcgcctccaaaggtaaaatgccacggtttgccaaat 235563  T
Q  246 --ttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
      ||  ||| |||||||| ||||||||||  |||||||||||||||||||| ||||| | | ||||||||||||||||||||||    
T  235562 gattttttttgtaggtaaccgatccctcagaagtcgccaagcaaggatagagactttgagatgaacctgtttatgccaaattaa 235479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 327
Target Start/End: Complemental strand, 11277566 - 11277294
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    ||||||||||| |||||||| |||  | | |||||||||||| ||  | || || ||||| || |||||||  ||||| || |||| |||| ||  ||||    
T  11277566 aataaattgcaaaaaatgatctgaagttgaatgagaatcgactcccaccactcctagccatgctcgcaccattggccataatgcactaaaatttacacaa 11277467  T
Q  155 gacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttag 254  Q
    ||| |||| |||||||| ||||||||||| | ||| ||||| |  ||||| |||||    |||| |  || ||| ||||| |   |||||||   ||| |    
T  11277466 gactaaaacaaatgattaacatcttcaacgttcccacatccagaaacacacaaccgcgcctccaaaggtaaaatgccacggtttgccaaattatttttcg 11277367  T
Q  255 taggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||| ||||| ||||| |||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  11277366 taggtaaccgatctctcaaaagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 11277294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 327
Target Start/End: Original strand, 47876846 - 47877081
Alignment:
Q  92 tcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaacctgcccgc 191  Q
    ||||||||| | || || ||||| ||||||| |||  | || || |||| |||| ||| |||||||||||| |||||||| ||||||||||| | |||||    
T  47876846 tcgacccctaccactcctagccatgcccgcatcaattgtcataatgcactaaaagttgaacaagacaaaaacaaatgattaacatcttcaacgttcccgc 47876945  T
Q  192 atcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggat 291  Q
    |||| |  ||||| |||||    |||| |  || ||| ||||| |   |||||||   ||| ||||||||  |||| ||||  |||||||||||||||||    
T  47876946 atccagaaacacacaaccgcgcctccaaaggtaaaatgccacggtttgccaaattattttttgtaggtaactgatctctcagaagtcgccaagcaaggat 47877045  T
Q  292 agaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||| ||||| | ||||||||||||||||||||||||    
T  47877046 agatactttgagaggaacctgtttatgccaaattaa 47877081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 4938243 - 4938170
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  4938243 gtaggtaaccgatccctcattagtcgccaagcaaggatagagactttgagagggacctgtttatgccaaattaa 4938170  T

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Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 17720660 - 17720733
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||| ||||||||||||||||| | |||||||||| |||||||||||||    
T  17720660 gtaggtaaccgatccctcagaagtcgccatgcaaggatagaaactttgagaggaacctgtgtatgccaaattaa 17720733  T

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Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 254 - 327
Target Start/End: Original strand, 29968000 - 29968073
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||| ||||| ||||  |||||||||||||| ||||| | ||||||||||||||||||||||||    
T  29968000 gtaggtaaccgatctctcaaaagtcctcaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 29968073  T

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Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 327
Target Start/End: Original strand, 37919370 - 37919642
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    ||||||||||| |||||||| |||  | |  ||||| ||||||||| | || || ||||| ||||||||||  ||||| || |||| |||| ||  ||||    
T  37919370 aataaattgcaaaaaatgatctgaagttgattgagattcgacccctaccactcctagccatgcccgcaccattggccataatgcactaaaagttacacaa 37919469  T
Q  155 gacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttag 254  Q
    ||||||||||||||||| ||||||||||| | ||| || |  |  ||||| |||||    |||| |  || ||| | ||| |   |||||||   ||| |    
T  37919470 gacaaaaataaatgattaacatcttcaacgttcccacaactagaaacacacaaccgcgcctccaaaggtaaaatgcaacggtttgccaaattattttttg 37919569  T
Q  255 taggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||| | ||| ||||  |||||||||||||||||||| ||||| | |||||||||||||| |||||||||    
T  37919570 taggtaaccaatctctcaggagtcgccaagcaaggatagatactttgagaggaacctgtttataccaaattaa 37919642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 551681 - 551595
Alignment:
Q  241 caaatttgatttagtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||||||| ||||| || ||||| |  | ||| ||||||||||  || || || |||||||||||||||||||||||||||||    
T  551681 caaatttgatttggtaggcaagcgatcacggatcagccgccaagcaaaaattgacacctttaaaggaacctgtttatgccaaattaa 551595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 17720452 - 17720586
Alignment:
Q  46 tgcatattcaataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaa 145  Q
    |||||| | |||||||||||| ||||||| |||  | |  ||||| || |||||| | || |||||||| ||  ||||||| ||||| || |||| ||||    
T  17720452 tgcataattaataaattgcactaaatgatctgaagttgattgagagtcaacccctaccactccaagccatgcttgcaccaatggccataaggcactaaaa 17720551  T
Q  146 attggacaagacaaaaataaatgattcacatcttc 180  Q
     ||| |||||||||||| |||||||| ||||||||    
T  17720552 gttgcacaagacaaaaacaaatgattaacatcttc 17720586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 29967856 - 29967929
Alignment:
Q  110 agccaagcccgcaccaaaggccacaaagcaccaaaaattggacaagacaaaaataaatgattcacatcttcaac 183  Q
    ||||| || |||||||  ||||| ||||||| |||| ||  |||||||||||| |||||||| |||||||||||    
T  29967856 agccatgctcgcaccattggccataaagcactaaaagttacacaagacaaaaacaaatgattaacatcttcaac 29967929  T

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Target: scaffold0472 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 327
Target Start/End: Original strand, 3079 - 3350
Alignment:
Q  56 ataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaag 155  Q
    |||||||||| |||||||| |||||||| |||||| ||||| ||  | || || | ||| || |||||||  ||||| || |||| |||| ||  |||||    
T  3079 ataaattgcaaaaaatgatctgagatagaatgagagtcgactcccaccactcctaaccatgctcgcaccattggccataatgcactaaaagttacacaag 3178  T
Q  156 acaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttagt 255  Q
    ||||||| |||||||| ||||||||||| | ||| ||||| |  ||||| |||||    |||| |  || ||| ||| | |   |||||||   ||| ||    
T  3179 acaaaaacaaatgattaacatcttcaacgttcccacatccagaaacacacaaccgcgcctccaaaggtaaaatgccatggtttgccaaattgcttttcgt 3278  T
Q  256 aggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||| ||||| ||||| |||| ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  3279 aggtaaccgatctctcaaaagtctccaagcaaggatagaaactttaagaggaacctgtttatgccaaattaa 3350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 327
Target Start/End: Complemental strand, 11519 - 11247
Alignment:
Q  55 aataaattgcacaaaatgatatgagatagtatgagaatcgaccccttcgacaccaagccaagcccgcaccaaaggccacaaagcaccaaaaattggacaa 154  Q
    |||||||||| ||||||||| |||  | |  ||||| ||||||||| | || || | |||| |||||||||  ||||| || || |||||| ||| ||||    
T  11519 aataaattgctcaaaatgatctgaagttgattgagagtcgacccctaccactcctaaccaatcccgcaccatcggccataatgctccaaaagttgcacaa 11420  T
Q  155 gacaaaaataaatgattcacatcttcaacctgcccgcatcccgttacacaaaaccgattttccacatctataatcccacgttccaccaaatttgatttag 254  Q
    |||||||| ||||||   |||| ||| || | ||| ||||| |  ||||| ||||| |  ||||||  || ||| ||||| |   |||||||   ||| |    
T  11419 gacaaaaacaaatgaaaaacattttcgacattcccacatccagaaacacataaccgctcctccacagatagaatgccacggtttgccaaattaagttttg 11320  T
Q  255 taggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    ||||||| |||||||| |  |||||||||||||||||||| ||||| | ||||||||||||||||||||||||    
T  11319 taggtaaccgatccctgagaagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaa 11247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 327
Target Start/End: Complemental strand, 105958 - 105885
Alignment:
Q  254 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaa 327  Q
    |||||||| ||||||||||  |||||||||||||||||||| ||||| | ||| ||||||||||||||||||||    
T  105958 gtaggtaaccgatccctcattagtcgccaagcaaggatagagactttgagagggacctgtttatgccaaattaa 105885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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