View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7582_low_16 (Length: 224)
Name: NF7582_low_16
Description: NF7582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7582_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 44646566 - 44646370
Alignment:
| Q |
17 |
tattttaataatctgaatgtgaagaaaaccagcctttgcactccatgttttcctccnnnnnnnnnn-------tcatctgtcattatgtatatttatata |
109 |
Q |
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| T |
44646566 |
tattttaataatctgaatgtgaagaaaaccagcctttgcactccctgttttcctccaaaaaaaaataaaaaaatcatctgtcattatatatatttatata |
44646467 |
T |
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| Q |
110 |
agcatttagtttgaattatattaaaccagatttataaaggaaaagactaatgaactaccgtattatattcaaatgaaatatgtggccggccactact |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44646466 |
agcatttagtttgaattatattaaaccagatttataaaggaaaagactaatgaactaccgtattatattcaaatgaaatatgtggccggccactact |
44646370 |
T |
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