View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7583_low_8 (Length: 242)
Name: NF7583_low_8
Description: NF7583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7583_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 7 - 231
Target Start/End: Complemental strand, 52051586 - 52051362
Alignment:
| Q |
7 |
gagttgagttttaaacttaaaaggaggaggaggagagtactagaattagaataggtatatttatttgagggaccatagtgttacagaatcttctgtacat |
106 |
Q |
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| T |
52051586 |
gagttgagttttaaacttaaaaggaggaggaggagagtactagaattagaataggtatatttatttgagggaccatagtgttacagaatcttctgtacat |
52051487 |
T |
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| Q |
107 |
ggatatgaactaatggttgtgattacagtggtggtgcatgccaatgctatttttctctttctattttctctctgaactcttattattatgactgcacctc |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52051486 |
ggatatgaactaatggttgtgattacagtggtggtgcatgccaatgctatttttctctttctattttctctctgaactcttattattatgactgcacctc |
52051387 |
T |
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| Q |
207 |
ttctgctgcatctctggcatttctt |
231 |
Q |
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||||||||||||||||||||||||| |
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| T |
52051386 |
ttctgctgcatctctggcatttctt |
52051362 |
T |
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