View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7584_high_11 (Length: 314)

Name: NF7584_high_11
Description: NF7584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7584_high_11
NF7584_high_11
[»] chr3 (61 HSPs)
chr3 (18-183)||(33807798-33807963)
chr3 (18-205)||(10139124-10139310)
chr3 (18-205)||(20498251-20498437)
chr3 (48-205)||(996064-996221)
chr3 (18-183)||(19253869-19254033)
chr3 (18-205)||(3206183-3206369)
chr3 (48-183)||(6589635-6589770)
chr3 (48-183)||(29448858-29448993)
chr3 (49-183)||(3999645-3999779)
chr3 (48-205)||(37820455-37820612)
chr3 (18-183)||(54625634-54625798)
chr3 (18-183)||(44762037-44762201)
chr3 (48-183)||(40246915-40247050)
chr3 (52-177)||(33996547-33996672)
chr3 (18-205)||(35337777-35337961)
chr3 (49-183)||(25418438-25418572)
chr3 (54-183)||(5825139-5825268)
chr3 (18-182)||(52114570-52114734)
chr3 (18-183)||(53929128-53929292)
chr3 (48-183)||(6035053-6035188)
chr3 (48-176)||(18749683-18749811)
chr3 (49-168)||(51699495-51699614)
chr3 (54-176)||(40897221-40897343)
chr3 (48-176)||(32580247-32580375)
chr3 (48-176)||(36674137-36674265)
chr3 (53-176)||(34484037-34484160)
chr3 (48-176)||(11431597-11431725)
chr3 (48-176)||(17946359-17946487)
chr3 (48-176)||(44906520-44906648)
chr3 (53-176)||(54628920-54629043)
chr3 (95-183)||(6131233-6131321)
chr3 (48-176)||(26107332-26107460)
chr3 (49-148)||(22057834-22057933)
chr3 (48-183)||(27899415-27899540)
chr3 (18-175)||(29030048-29030203)
chr3 (53-176)||(31646293-31646414)
chr3 (48-176)||(48379228-48379356)
chr3 (48-176)||(50903247-50903375)
chr3 (48-163)||(51737746-51737861)
chr3 (48-176)||(52810449-52810577)
chr3 (72-183)||(1439894-1440005)
chr3 (48-176)||(52617978-52618100)
chr3 (48-172)||(20833063-20833187)
chr3 (18-125)||(1440010-1440116)
chr3 (49-183)||(52079999-52080117)
chr3 (57-151)||(55235264-55235359)
chr3 (48-176)||(10728658-10728776)
chr3 (48-176)||(37454932-37455050)
chr3 (53-117)||(10660611-10660675)
chr3 (48-183)||(39842494-39842619)
chr3 (130-183)||(33807680-33807733)
chr3 (48-176)||(39038111-39038229)
chr3 (48-176)||(50762067-50762185)
chr3 (54-182)||(44276466-44276580)
chr3 (48-111)||(539476-539539)
chr3 (48-165)||(6975817-6975924)
chr3 (48-106)||(23753463-23753521)
chr3 (119-176)||(45862983-45863040)
chr3 (48-104)||(23535890-23535946)
chr3 (108-176)||(15492874-15492942)
chr3 (120-175)||(12103733-12103789)
[»] chr8 (37 HSPs)
chr8 (18-205)||(24501790-24501976)
chr8 (18-183)||(26374429-26374593)
chr8 (18-183)||(42938116-42938280)
chr8 (48-205)||(42937423-42937580)
chr8 (18-205)||(5576597-5576784)
chr8 (18-205)||(2704796-2704982)
chr8 (18-205)||(7506876-7507062)
chr8 (48-205)||(42735254-42735411)
chr8 (48-182)||(10392237-10392371)
chr8 (18-183)||(23115168-23115331)
chr8 (53-183)||(4403184-4403314)
chr8 (48-176)||(9288463-9288591)
chr8 (48-176)||(14782141-14782269)
chr8 (48-176)||(44725816-44725944)
chr8 (48-176)||(10295386-10295515)
chr8 (48-176)||(43166696-43166824)
chr8 (48-173)||(18958736-18958861)
chr8 (48-176)||(19717887-19718015)
chr8 (50-205)||(43959731-43959876)
chr8 (18-205)||(41479140-41479316)
chr8 (48-173)||(39467477-39467602)
chr8 (48-176)||(26856139-26856267)
chr8 (55-177)||(4950021-4950143)
chr8 (56-163)||(13478269-13478376)
chr8 (56-183)||(39189815-39189940)
chr8 (48-176)||(18305977-18306095)
chr8 (54-162)||(8410416-8410526)
chr8 (48-176)||(7466407-7466525)
chr8 (48-176)||(32497597-32497715)
chr8 (48-117)||(16362268-16362337)
chr8 (18-106)||(32711358-32711445)
chr8 (53-176)||(42305801-42305914)
chr8 (48-106)||(4031334-4031392)
chr8 (48-106)||(31623767-31623825)
chr8 (48-176)||(37857191-37857309)
chr8 (130-171)||(32711305-32711346)
chr8 (119-183)||(9770439-9770503)
[»] chr6 (19 HSPs)
chr6 (18-205)||(6197455-6197641)
chr6 (18-183)||(1391666-1391830)
chr6 (48-182)||(2300738-2300872)
chr6 (48-183)||(29076670-29076805)
chr6 (48-183)||(29111644-29111779)
chr6 (18-205)||(28002707-28002893)
chr6 (48-176)||(31895767-31895895)
chr6 (53-176)||(34773485-34773608)
chr6 (57-183)||(7051925-7052051)
chr6 (48-176)||(14262439-14262567)
chr6 (48-176)||(34759056-34759184)
chr6 (48-176)||(7497147-7497274)
chr6 (53-176)||(31067569-31067682)
chr6 (48-176)||(30385075-30385191)
chr6 (68-176)||(4200443-4200541)
chr6 (134-183)||(2238668-2238717)
chr6 (142-182)||(11113733-11113773)
chr6 (88-148)||(657065-657122)
chr6 (53-97)||(3848286-3848330)
[»] chr4 (65 HSPs)
chr4 (18-183)||(41881082-41881247)
chr4 (18-205)||(25331173-25331359)
chr4 (18-183)||(55302885-55303049)
chr4 (18-182)||(32950837-32951000)
chr4 (18-205)||(1044849-1045035)
chr4 (48-205)||(34228561-34228718)
chr4 (48-205)||(41320881-41321038)
chr4 (48-183)||(12113016-12113151)
chr4 (53-205)||(39479333-39479485)
chr4 (18-183)||(37046450-37046616)
chr4 (18-183)||(1112935-1113099)
chr4 (18-183)||(7007416-7007580)
chr4 (48-183)||(42786755-42786890)
chr4 (18-205)||(30009655-30009841)
chr4 (49-205)||(3436665-3436821)
chr4 (18-183)||(22202057-22202221)
chr4 (18-154)||(25446092-25446227)
chr4 (48-153)||(7249795-7249900)
chr4 (48-205)||(31314720-31314867)
chr4 (51-183)||(46635648-46635774)
chr4 (48-176)||(5441475-5441603)
chr4 (48-176)||(27768127-27768255)
chr4 (48-176)||(54341215-54341343)
chr4 (48-162)||(19740929-19741043)
chr4 (18-153)||(28541740-28541874)
chr4 (68-205)||(24130959-24131097)
chr4 (48-176)||(37828409-37828537)
chr4 (18-183)||(27454078-27454243)
chr4 (48-176)||(48261198-48261326)
chr4 (48-176)||(51320992-51321120)
chr4 (48-183)||(53275910-53276046)
chr4 (48-176)||(54853475-54853603)
chr4 (53-182)||(40537161-40537280)
chr4 (48-173)||(37915898-37916023)
chr4 (48-176)||(32322162-32322290)
chr4 (54-174)||(44770862-44770982)
chr4 (48-183)||(9163147-9163274)
chr4 (18-139)||(23464997-23465117)
chr4 (18-125)||(25504697-25504803)
chr4 (48-176)||(23987285-23987403)
chr4 (89-176)||(8711978-8712065)
chr4 (48-176)||(41725196-41725321)
chr4 (108-183)||(11090435-11090510)
chr4 (54-176)||(12913301-12913413)
chr4 (48-183)||(39307253-39307388)
chr4 (54-176)||(56445362-56445474)
chr4 (89-176)||(24736447-24736534)
chr4 (48-176)||(36479249-36479366)
chr4 (48-176)||(30967316-30967434)
chr4 (48-119)||(29649731-29649802)
chr4 (54-139)||(28371001-28371086)
chr4 (68-174)||(20021424-20021531)
chr4 (48-182)||(28483970-28484093)
chr4 (48-177)||(41581795-41581923)
chr4 (48-173)||(5800049-5800164)
chr4 (48-106)||(32684065-32684123)
chr4 (48-106)||(49834890-49834948)
chr4 (48-176)||(49501526-49501646)
chr4 (48-176)||(49507591-49507711)
chr4 (48-173)||(50018322-50018437)
chr4 (109-173)||(36727960-36728023)
chr4 (83-175)||(12193135-12193227)
chr4 (56-175)||(13400814-13400935)
chr4 (127-173)||(32684018-32684064)
chr4 (142-175)||(55047641-55047674)
[»] chr2 (35 HSPs)
chr2 (18-205)||(16269735-16269921)
chr2 (18-183)||(24776399-24776563)
chr2 (18-205)||(20605280-20605466)
chr2 (18-205)||(31170604-31170790)
chr2 (18-205)||(14198557-14198743)
chr2 (48-205)||(12407453-12407610)
chr2 (18-177)||(35317106-35317264)
chr2 (18-205)||(43847690-43847876)
chr2 (48-183)||(5093049-5093184)
chr2 (18-205)||(305445-305631)
chr2 (52-177)||(32125330-32125455)
chr2 (48-205)||(22551743-22551900)
chr2 (48-163)||(1789515-1789630)
chr2 (49-205)||(9120200-9120356)
chr2 (48-183)||(44765848-44765974)
chr2 (48-176)||(28844628-28844756)
chr2 (48-176)||(33135696-33135823)
chr2 (48-176)||(10657479-10657607)
chr2 (53-176)||(18177345-18177468)
chr2 (53-176)||(25288237-25288360)
chr2 (48-158)||(26788859-26788969)
chr2 (65-176)||(43078653-43078764)
chr2 (57-183)||(10125302-10125418)
chr2 (48-176)||(28740302-28740420)
chr2 (54-176)||(13833441-13833553)
chr2 (48-117)||(7026677-7026746)
chr2 (48-176)||(3463745-3463863)
chr2 (54-117)||(379016-379079)
chr2 (53-115)||(26601270-26601332)
chr2 (48-106)||(3574920-3574978)
chr2 (48-106)||(6224626-6224684)
chr2 (119-176)||(6224576-6224633)
chr2 (48-97)||(21370638-21370687)
chr2 (119-174)||(215249-215303)
chr2 (48-90)||(215320-215362)
[»] chr5 (26 HSPs)
chr5 (18-183)||(21147110-21147274)
chr5 (18-205)||(7016716-7016902)
chr5 (49-183)||(33656040-33656174)
chr5 (48-177)||(5272924-5273053)
chr5 (18-205)||(27458927-27459112)
chr5 (18-163)||(849190-849334)
chr5 (48-177)||(139345-139474)
chr5 (48-177)||(32157899-32158031)
chr5 (48-176)||(14000111-14000239)
chr5 (48-183)||(1152102-1152237)
chr5 (48-176)||(13926003-13926131)
chr5 (48-176)||(39852417-39852545)
chr5 (48-173)||(4550266-4550391)
chr5 (49-149)||(6460865-6460965)
chr5 (57-176)||(7947579-7947698)
chr5 (48-183)||(9689730-9689864)
chr5 (53-176)||(5949185-5949298)
chr5 (48-143)||(14465266-14465361)
chr5 (48-176)||(4240468-4240586)
chr5 (48-183)||(22746369-22746496)
chr5 (57-117)||(1461203-1461263)
chr5 (57-176)||(40013718-40013827)
chr5 (57-183)||(9220716-9220832)
chr5 (55-106)||(37013993-37014044)
chr5 (108-183)||(1511349-1511426)
chr5 (119-176)||(37014037-37014094)
[»] chr7 (60 HSPs)
chr7 (18-182)||(43581090-43581253)
chr7 (18-183)||(7718361-7718525)
chr7 (48-205)||(40996626-40996783)
chr7 (49-183)||(7719259-7719393)
chr7 (51-205)||(973260-973414)
chr7 (18-205)||(18914712-18914898)
chr7 (18-205)||(30440840-30441026)
chr7 (18-205)||(34695317-34695503)
chr7 (18-205)||(47914310-47914496)
chr7 (51-183)||(44343395-44343527)
chr7 (48-183)||(12893481-12893616)
chr7 (54-205)||(20275240-20275391)
chr7 (18-205)||(47879212-47879398)
chr7 (53-183)||(32142916-32143046)
chr7 (50-205)||(34009088-34009243)
chr7 (18-205)||(39219354-39219539)
chr7 (52-183)||(7113529-7113660)
chr7 (48-183)||(10068533-10068668)
chr7 (52-153)||(43679491-43679592)
chr7 (48-176)||(23101364-23101492)
chr7 (48-176)||(28342413-28342541)
chr7 (48-176)||(3022992-3023120)
chr7 (48-176)||(29614770-29614898)
chr7 (48-176)||(39784165-39784293)
chr7 (48-176)||(18838455-18838583)
chr7 (48-176)||(28034811-28034939)
chr7 (48-155)||(12963767-12963874)
chr7 (54-173)||(33382709-33382828)
chr7 (54-176)||(7993214-7993336)
chr7 (54-183)||(43187356-43187485)
chr7 (48-176)||(8675399-8675527)
chr7 (48-176)||(9882243-9882370)
chr7 (48-183)||(12740439-12740573)
chr7 (49-164)||(727587-727692)
chr7 (48-183)||(9179946-9180071)
chr7 (68-176)||(37972873-37972981)
chr7 (53-152)||(25805763-25805862)
chr7 (48-115)||(31638948-31639015)
chr7 (68-176)||(41827390-41827498)
chr7 (53-173)||(44256775-44256895)
chr7 (48-183)||(3797066-3797191)
chr7 (57-176)||(19810874-19810983)
chr7 (48-148)||(32883848-32883948)
chr7 (48-182)||(19251605-19251729)
chr7 (48-176)||(509722-509840)
chr7 (48-176)||(40460723-40460841)
chr7 (53-173)||(44121919-44122029)
chr7 (56-139)||(10676463-10676546)
chr7 (48-119)||(46405494-46405565)
chr7 (48-117)||(37327993-37328062)
chr7 (53-205)||(1470213-1470362)
chr7 (54-176)||(29585586-29585698)
chr7 (48-106)||(47066770-47066828)
chr7 (53-106)||(17001099-17001152)
chr7 (88-166)||(10617024-10617102)
chr7 (48-173)||(33892269-33892384)
chr7 (48-117)||(39028163-39028232)
chr7 (53-112)||(447854-447913)
chr7 (111-173)||(44623295-44623357)
chr7 (119-176)||(17001049-17001106)
[»] chr1 (45 HSPs)
chr1 (18-205)||(50192528-50192715)
chr1 (18-205)||(21222183-21222369)
chr1 (48-205)||(19451786-19451943)
chr1 (52-205)||(49198247-49198400)
chr1 (48-183)||(6304252-6304387)
chr1 (18-205)||(45759987-45760173)
chr1 (18-205)||(47654329-47654516)
chr1 (48-183)||(35279737-35279872)
chr1 (53-205)||(31572175-31572327)
chr1 (53-183)||(35679128-35679258)
chr1 (48-183)||(45536009-45536150)
chr1 (48-178)||(49418149-49418279)
chr1 (18-205)||(28824351-28824536)
chr1 (18-205)||(47780747-47780933)
chr1 (48-173)||(32588963-32589088)
chr1 (48-176)||(6312639-6312767)
chr1 (48-176)||(29396395-29396523)
chr1 (48-183)||(9577432-9577567)
chr1 (49-183)||(29556170-29556305)
chr1 (48-173)||(51701645-51701770)
chr1 (48-176)||(48177469-48177597)
chr1 (18-148)||(730184-730314)
chr1 (48-176)||(25612222-25612350)
chr1 (53-176)||(9322507-9322630)
chr1 (53-176)||(15835060-15835183)
chr1 (48-183)||(37014640-37014775)
chr1 (48-175)||(46328107-46328234)
chr1 (53-176)||(28387400-28387523)
chr1 (48-154)||(48524384-48524490)
chr1 (48-183)||(33025578-33025703)
chr1 (48-176)||(38536106-38536224)
chr1 (48-176)||(38558324-38558442)
chr1 (56-115)||(955823-955882)
chr1 (53-183)||(48668785-48668905)
chr1 (48-176)||(29219351-29219469)
chr1 (48-139)||(51085860-51085951)
chr1 (48-106)||(18798556-18798614)
chr1 (48-172)||(5495117-5495231)
chr1 (73-175)||(38319996-38320098)
chr1 (48-97)||(49230951-49231000)
chr1 (56-106)||(31622536-31622586)
chr1 (48-149)||(47784451-47784542)
chr1 (146-205)||(48524805-48524864)
chr1 (53-173)||(45272656-45272765)
chr1 (127-175)||(18798615-18798663)
[»] scaffold0400 (1 HSPs)
scaffold0400 (18-205)||(15011-15197)
[»] scaffold0365 (1 HSPs)
scaffold0365 (18-205)||(15654-15840)
[»] scaffold0151 (1 HSPs)
scaffold0151 (18-205)||(38583-38768)
[»] scaffold0004 (1 HSPs)
scaffold0004 (18-183)||(102138-102302)
[»] scaffold0113 (1 HSPs)
scaffold0113 (48-183)||(38895-39030)
[»] scaffold0037 (1 HSPs)
scaffold0037 (18-180)||(100254-100415)
[»] scaffold0276 (1 HSPs)
scaffold0276 (51-182)||(540-671)
[»] scaffold0543 (1 HSPs)
scaffold0543 (53-176)||(10637-10760)
[»] scaffold0110 (1 HSPs)
scaffold0110 (53-176)||(39624-39747)
[»] scaffold0054 (1 HSPs)
scaffold0054 (55-176)||(36914-37035)
[»] scaffold1504 (1 HSPs)
scaffold1504 (48-176)||(936-1063)
[»] scaffold0042 (1 HSPs)
scaffold0042 (53-176)||(58083-58206)
[»] scaffold0347 (1 HSPs)
scaffold0347 (108-183)||(14892-14967)
[»] scaffold0839 (1 HSPs)
scaffold0839 (77-163)||(3712-3798)
[»] scaffold0922 (1 HSPs)
scaffold0922 (48-113)||(4272-4337)
[»] scaffold0306 (1 HSPs)
scaffold0306 (48-176)||(13954-14072)
[»] scaffold0152 (3 HSPs)
scaffold0152 (48-117)||(21304-21373)
scaffold0152 (144-176)||(21255-21287)
scaffold0152 (144-176)||(28510-28542)
[»] scaffold0007 (1 HSPs)
scaffold0007 (56-149)||(199905-199998)


Alignment Details
Target: chr3 (Bit Score: 138; Significance: 4e-72; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 33807963 - 33807798
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807963 caatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 33807864  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807863 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 10139310 - 10139124
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10139310 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 10139212  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  10139211 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 10139124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 20498251 - 20498437
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20498251 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 20498349  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  20498350 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 20498437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 996221 - 996064
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  996221 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 996122  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  996121 aagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 996064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 19253869 - 19254033
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  19253869 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgt 19253967  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19253968 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 19254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 3206369 - 3206183
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3206369 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 3206271  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||       |||||||||||||||    
T  3206270 gggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttac 3206183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 6589635 - 6589770
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6589635 gtctagtggtattcaaaatcattcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 6589734  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||    
T  6589735 aagtctttcatgaaaacatgagatttcttaggattg 6589770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 29448993 - 29448858
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||    
T  29448993 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaa 29448894  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||    
T  29448893 aagtctttcatgaaaacatgagatttcttaggattg 29448858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 49 - 183
Target Start/End: Complemental strand, 3999779 - 3999645
Alignment:
Q  49 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  3999779 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaa 3999680  T
Q  149 agtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||||| ||||||||||||||||||||||||    
T  3999679 agtctttcataaaaacatgagatttcttaggattg 3999645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 37820612 - 37820455
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  37820612 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaa 37820513  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    ||||||||||| |||||||||||||||||| |||||       |||||||||||||||    
T  37820512 aagtctttcataaaaacatgagatttcttaagattgtttttttcttttaagattttac 37820455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 54625634 - 54625798
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54625634 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 54625732  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  54625733 gggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattg 54625798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 44762201 - 44762037
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44762201 caatcaagactcttaatcacttaaaaaaa-gtctagtggtatttaaaattattcaagtttcgaaggattgtttaataaatcagattttgatggattttgt 44762103  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  44762102 gggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagattg 44762037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 40246915 - 40247050
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  40246915 gtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaa 40247014  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||||||| |||| |||||    
T  40247015 aagtctttcatgaaaacatgagattccttatgattg 40247050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 33996672 - 33996547
Alignment:
Q  52 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  33996672 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagt 33996573  T
Q  152 ctttcatgaaaacatgagatttctta 177  Q
    |||| || ||||||||||||||||||    
T  33996572 cttttataaaaacatgagatttctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 35337777 - 35337961
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35337777 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaaaaattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 35337875  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||       |||||||||||||||    
T  35337876 gggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt-ttaggattgtttttttcttttaagattttac 35337961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 49 - 183
Target Start/End: Original strand, 25418438 - 25418572
Alignment:
Q  49 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  25418438 tctagcggtattcaaaatcattcaaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaa 25418537  T
Q  149 agtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||| |||||||||||||||||||| ||||||||||    
T  25418538 agtatttcatgaaaacatgagattccttaggattg 25418572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 54 - 183
Target Start/End: Original strand, 5825139 - 5825268
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  154 ttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||||||||||||||||||| |||||    
T  5825239 ttcatgaaaacatgagatttcttatgattg 5825268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 52114570 - 52114734
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||| ||||||||||        ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  52114570 caatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgt 52114669  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 182  Q
    || ||||| |||| |||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  52114670 ggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatgagatttcttaggatt 52114734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 53929292 - 53929128
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||||||||||||||||    
T  53929292 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcatttaaatatcgaacgattgtttaataaataagattttgatggattttgt 53929194  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
     ||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  53929193 aggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattttttaggattg 53929128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 6035188 - 6035053
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||| |||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  6035188 gtctcgtgatattcaaaatcattcaaatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaa 6035089  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||| |||||||||||||||||| |||||    
T  6035088 aagtctttcataaaaacatgagatttcttaagattg 6035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 18749683 - 18749811
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  18749683 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 18749782  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  18749783 aagtctttcatgaaaagatgagatttctt 18749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 51699614 - 51699495
Alignment:
Q  49 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  51699614 tctagtggtattcaaaatcattcaaatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaa 51699515  T
Q  149 agtctttcatgaaaacatga 168  Q
    | |||||| |||||||||||    
T  51699514 aatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 40897221 - 40897343
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||    
T  40897221 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtct 40897320  T
Q  154 ttcatgaaaacatgagatttctt 176  Q
    |||||||||| ||||||||||||    
T  40897321 ttcatgaaaagatgagatttctt 40897343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 32580247 - 32580375
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || ||||    
T  32580247 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaa 32580346  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  32580347 aagtctttcatgaaaagatgagatttctt 32580375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 36674265 - 36674137
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  36674265 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 36674166  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  36674165 aagtctttcatgaaaagatgagatttctt 36674137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 34484160 - 34484037
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||    
T  34484160 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 34484061  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    ||||||||||| ||||||||||||    
T  34484060 tttcatgaaaagatgagatttctt 34484037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 11431597 - 11431725
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||  ||||||| |||||||||||||||||| ||||| ||||||| || ||||    
T  11431597 gtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaa 11431696  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  11431697 aagtctttcatgaaaagatgagatttctt 11431725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 17946359 - 17946487
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  17946359 gtctcgtgatattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 17946458  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  17946459 aagtctttcatgaaaagatgagatttctt 17946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 44906648 - 44906520
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || ||||    
T  44906648 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaa 44906549  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    | |||||||||||||| ||||||||||||    
T  44906548 atgtctttcatgaaaagatgagatttctt 44906520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 54628920 - 54629043
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  54628920 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 54629019  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    |||||| |||| ||||||||||||    
T  54629020 tttcataaaaagatgagatttctt 54629043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 95 - 183
Target Start/End: Complemental strand, 6131321 - 6131233
Alignment:
Q  95 aatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6131321 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 6131233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 26107332 - 26107460
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||| ||||| ||||||| || ||||    
T  26107332 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaa 26107431  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||| |||||| |||| ||||||||||||    
T  26107432 aagtatttcataaaaagatgagatttctt 26107460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 22057834 - 22057933
Alignment:
Q  49 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  22057834 tctagtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 27899415 - 27899540
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||          | ||||||| |||||||||||||||||||||    
T  27899415 gtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------taggattttctagtgaaattttagcatgaaa 27899504  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||| |||||||| |||||    
T  27899505 aagtctttcatgaaaacatgaaatttcttatgattg 27899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 175
Target Start/End: Original strand, 29030048 - 29030203
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29030048 caatcaagactcttaatcacttaaaaaa--gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 29030145  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 175  Q
    || ||||| || |||||||||| ||||||    | ||| |||||||||||||||||||    
T  29030146 ggaattttctaatgaaattttaacatgaattttttttttatgaaaacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 31646414 - 31646293
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  31646414 gtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31646315  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    ||||||||||  ||||||||||||    
T  31646314 tttcatgaaa--atgagatttctt 31646293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 48379228 - 48379356
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||  | ||||    
T  48379228 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaa 48379327  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    | |||||||||||||| || |||||||||    
T  48379328 atgtctttcatgaaaagatcagatttctt 48379356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 50903375 - 50903247
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  50903375 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 50903276  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    || ||||| ||||||| ||||||||||||    
T  50903275 aaatcttttatgaaaatatgagatttctt 50903247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 163
Target Start/End: Complemental strand, 51737861 - 51737746
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| | ||| ||||||| || ||||    
T  51737861 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaa 51737762  T
Q  148 aagtctttcatgaaaa 163  Q
    ||||||||||| ||||    
T  51737761 aagtctttcataaaaa 51737746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 52810449 - 52810577
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||| ||| |||||||||||||||   ||||||||||||||||||||||||| ||| | ||||||| || ||||    
T  52810449 gtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaa 52810548  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    || ||||||||||||| ||||||||||||    
T  52810549 aaatctttcatgaaaagatgagatttctt 52810577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 1440005 - 1439894
Alignment:
Q  72 aaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 171  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||||||||| |||| ||||||| | |||||||||||||||| |||||||||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  172 ttcttaggattg 183  Q
    || |||||||||    
T  1439905 tttttaggattg 1439894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 52618100 - 52617978
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||      ||     
T  52618100 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt------aac 52618007  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    ||||||||||| |||| ||||||||||||    
T  52618006 aagtctttcataaaaagatgagatttctt 52617978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 172
Target Start/End: Original strand, 20833063 - 20833187
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||| ||||| |||||| ||||||| || ||||    
T  20833063 gtcttgtggtattcaaaatcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaa 20833162  T
Q  148 aagtctttcatgaaaacatgagatt 172  Q
    |||| ||||||||||| || |||||    
T  20833163 aagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 1440116 - 1440010
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  1440116 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttat 1440018  T
Q  118 gggatttt 125  Q
    ||||||||    
T  1440017 gggatttt 1440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 183
Target Start/End: Original strand, 52079999 - 52080117
Alignment:
Q  49 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||          |||||||||||||||| || |||||||||||||||||||    
T  52079999 tctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatca----------gattttgtgggattttctaatgaaattttagcatgaaaa 52080088  T
Q  149 agtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||      ||||||||||||||||||||||||||    
T  52080089 agt------tgaaaacatgagatttcttaggattg 52080117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 55235264 - 55235359
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga-ttttgtgggattttttagtgaaattttagcatgaaaaagt 151  Q
    ||||||||||||||||||||||||| |||||||||||||||  | |||||||||| |||||||||||||| || |||||||||||||| |||||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 10728776 - 10728658
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  10728776 gtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 10728687  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  10728686 aagtctttcatgaaaagatgagatttctt 10728658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 37454932 - 37455050
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||          || ||||||||||||||| ||||| ||||||| || ||||    
T  37454932 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tgaattttgtgggattttgtagtgtaattttaacaagaaa 37455021  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||| ||||||||||| ||||||||||||    
T  37455022 aagtatttcatgaaaagatgagatttctt 37455050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 10660611 - 10660675
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  10660611 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 39842619 - 39842494
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||          || || ||||||| || ||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttg----------taatgtaattttaacaagaaa 39842530  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||||||||||| |||||||||||| ||||||    
T  39842529 aagtctttcatgaaaagatgagatttcttgggattg 39842494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 33807733 - 33807680
Alignment:
Q  130 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 39038111 - 39038229
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||| |||||||||||||||||||||| ||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  39038111 gtcttgtggtatccaaaatcattcaaatttcgaagaattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 39038200  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    ||||||||||| |||| ||||||||||||    
T  39038201 aagtctttcataaaaagatgagatttctt 39038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 50762185 - 50762067
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| ||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  50762185 gtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 50762096  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  50762095 aagtctttcatgaaaagatgagatttctt 50762067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 182
Target Start/End: Original strand, 44276466 - 44276580
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    |||||||||||||||||||||||    |||||||||||||||||          |||||||||||||||||| ||||||||||||| || |||||| |||    
T  44276466 tggtattcaaaatcattcaaatt----aggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaaatct 44276551  T
Q  154 ttcatgaaaacatgagatttcttaggatt 182  Q
    |||||||| ||||||||||| || |||||    
T  44276552 ttcatgaagacatgagattttttgggatt 44276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 111
Target Start/End: Complemental strand, 539539 - 539476
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga 111  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  539539 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 6975817 - 6975924
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||| ||| |||| |||||          |||| ||||||||||||| |||| |||||| |||||||||    
T  6975817 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaat----------tggaatttgtgggattttctagtaaaatttgagcatgaaa 6975906  T
Q  148 aagtctttcatgaaaaca 165  Q
     |||||||||||||||||    
T  6975907 cagtctttcatgaaaaca 6975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 23753521 - 23753463
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  23753521 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 45862983 - 45863040
Alignment:
Q  119 ggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 176  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 45863040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 104  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 15492942 - 15492874
Alignment:
Q  108 tggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||| |||| || ||||||||||||| || |||||| |||||||||||  ||| |||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttctt 15492874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 175
Target Start/End: Original strand, 12103733 - 12103789
Alignment:
Q  120 gattttttagtgaaattttagcatgaaaaagtctttcatgaaaaca-tgagatttct 175  Q
    |||||| ||||||||||||| || ||| |||||||||||||| ||| ||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaagacattgagatttct 12103789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 9e-70; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 24501976 - 24501790
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24501976 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 24501878  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  24501877 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 24501790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 26374593 - 26374429
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26374593 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgt 26374495  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26374494 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 26374429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 42938280 - 42938116
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42938280 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 42938182  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42938181 gggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttcttaggattg 42938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 42937423 - 42937580
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  42937423 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaa 42937522  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||||||||||||||||||||||||| |||||       |||||||||||||||    
T  42937523 aagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttac 42937580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 5576784 - 5576597
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  5576784 caatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgt 5576685  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       |||||||||||||||    
T  5576684 gggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttccttttaagattttac 5576597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 2704982 - 2704796
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  2704982 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgt 2704884  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  2704883 gggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 2704796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 7507062 - 7506876
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7507062 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaaccattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 7506964  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||    
T  7506963 gggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttcttaggattgtttttttcttttaagattttac 7506876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 42735411 - 42735254
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  42735411 gtctagtggtattcaaaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaa 42735312  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    ||||||||||| ||||||||||||||||||||||||       |||||||||||||||    
T  42735311 aagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagattttac 42735254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 10392371 - 10392237
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10392371 gtctagtggtattcagaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 10392272  T
Q  148 aagtctttcatgaaaacatgagatttcttaggatt 182  Q
    || ||||||||||||||||||||||| ||||||||    
T  10392271 aaatctttcatgaaaacatgagatttattaggatt 10392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 23115331 - 23115168
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23115331 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaa-tcattcaaatttggaaggattgtttaataaatcagattttgatggattttgt 23115234  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  23115233 gggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattg 23115168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 53 - 183
Target Start/End: Original strand, 4403184 - 4403314
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  4403184 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtc 4403283  T
Q  153 tttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||| |||||||||||| ||||||    
T  4403284 tttcatgaaaatatgagatttcttgggattg 4403314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 9288591 - 9288463
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || ||||    
T  9288591 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaa 9288492  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  9288491 aagtctttcatgaaaagatgagatttctt 9288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 14782269 - 14782141
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  14782269 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 14782170  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  14782169 aagtctttcatgaaaagatgagatttctt 14782141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 44725944 - 44725816
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  44725944 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 44725845  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  44725844 aagtctttcatgaaaagatgagatttctt 44725816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 10295515 - 10295386
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga-ttttgtgggattttttagtgaaattttagcatgaa 146  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||| ||||| ||||||| || |||    
T  10295515 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaa 10295416  T
Q  147 aaagtctttcatgaaaacatgagatttctt 176  Q
    ||||||||||||||||| ||||||||||||    
T  10295415 aaagtctttcatgaaaagatgagatttctt 10295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 43166824 - 43166696
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| | ||| ||||||| || ||||    
T  43166824 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaa 43166725  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||| ||||||||||| ||||||||||||    
T  43166724 aagtttttcatgaaaagatgagatttctt 43166696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 48 - 173
Target Start/End: Complemental strand, 18958861 - 18958736
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| ||||| ||||||| || ||||    
T  18958861 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaa 18958762  T
Q  148 aagtctttcatgaaaacatgagattt 173  Q
    |||||||||||||||| || ||||||    
T  18958761 aagtctttcatgaaaagattagattt 18958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 19718015 - 19717887
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||| ||||||||||||||||||| ||||| ||||||| || ||||    
T  19718015 gtcttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaa 19717916  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||| ||||||| ||||||||||||    
T  19717915 aagtcttttatgaaaagatgagatttctt 19717887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 50 - 205
Target Start/End: Original strand, 43959731 - 43959876
Alignment:
Q  50 ctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaa 149  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||    
T  43959731 ctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtg----------gtgaaattttagcatgaaaaa 43959820  T
Q  150 gtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||| || |||||||||||||||||| |||||       |||||||||||||||    
T  43959821 gtctttaattaaaacatgagatttcttatgattgtttttttcttttaagattttac 43959876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 41479140 - 41479316
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||          ||||    
T  41479140 caatcaagactcttaatcacttaaaaaaa-gtctaatggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagatt----------ttgt 41479228  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||    
T  41479229 gggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 41479316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 48 - 173
Target Start/End: Complemental strand, 39467602 - 39467477
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||||| ||||| ||||||| || ||||    
T  39467602 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaa 39467503  T
Q  148 aagtctttcatgaaaacatgagattt 173  Q
    || ||||||||||||| |||||||||    
T  39467502 aaatctttcatgaaaagatgagattt 39467477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 26856139 - 26856267
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  26856139 gtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 26856238  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    ||||||||||  |||| || |||||||||    
T  26856239 aagtctttcagaaaaaaataagatttctt 26856267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 55 - 177
Target Start/End: Complemental strand, 4950143 - 4950021
Alignment:
Q  55 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 154  Q
    ||||||||||||||||||| |||| || |||| |||||||||| ||||||||||||| ||||||| ||||| ||||||||||||||||||||||| | ||    
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatt 4950044  T
Q  155 tcatgaaaacatgagatttctta 177  Q
    ||||| |||||| ||||||||||    
T  4950043 tcatgcaaacataagatttctta 4950021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 13478376 - 13478269
Alignment:
Q  56 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttt 155  Q
    |||||||||||| || |||||||||||||||||||||||||| |||||| | |||||||||| |||||||||||  |||||||||||||| |||||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtcttt 13478277  T
Q  156 catgaaaa 163  Q
     |||||||    
T  13478276 tatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 183
Target Start/End: Complemental strand, 39189940 - 39189815
Alignment:
Q  56 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttt 155  Q
    |||||||| |||||||||||||||||||||||||||||||||  || ||||||||||||||  | ||||| |||| |||||||| || |||||| |||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaat-tgaatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatcttt 39189843  T
Q  156 catgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||| ||||||    
T  39189842 catgaaaacatgagatttcttgggattg 39189815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 18306095 - 18305977
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||    
T  18306095 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaa 18306006  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  18306005 aagtctttcatgaaaagatgagatttctt 18305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 8410526 - 8410416
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt--ttttagtgaaattttagcatgaaaaagt 151  Q
    ||||||||||||||||| |||||| ||||||||||||| |||||  || |||||||||||||||||||||  ||||||||||||||||| |||| |||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagt 8410427  T
Q  152 ctttcatgaaa 162  Q
    |||||| ||||    
T  8410426 ctttcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 7466407 - 7466525
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||    
T  7466407 gtcttgtggtattcaaaatcattcaaattttgaagaattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaa 7466496  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  7466497 aagtctttcatgaaaagatgagatttctt 7466525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 32497597 - 32497715
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||          |||||||||||||||||| ||||| ||||||| || || |    
T  32497597 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaga 32497686  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  32497687 aagtctttcatgaaaagatgagatttctt 32497715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 16362268 - 16362337
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  16362268 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 16362337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 32711445 - 32711358
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32711445 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 42305914 - 42305801
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||| |||||||||||||||||||||||||| |||  |||||| ||||||||||          ||||| ||||||| || |||||||||    
T  42305914 gtggtattcaaaataattcaaatttcgaaggattgtttaatcaattggattttaatggattttg----------tagtgtaattttaacaagaaaaagtc 42305825  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
     |||||||||| ||||||||||||    
T  42305824 attcatgaaaaaatgagatttctt 42305801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 4031392 - 4031334
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  4031392 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 31623767 - 31623825
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  31623767 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 37857191 - 37857309
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||| ||||||||||||  ||||||||||||||||||  ||||||||||||||||||          |||| ||||| | || ||||    
T  37857191 gtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggattttgt----------agtgtaatttgaacaagaaa 37857280  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    || ||||||||||||| ||||||||||||    
T  37857281 aaatctttcatgaaaagatgagatttctt 37857309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 32711346 - 32711305
Alignment:
Q  130 tgaaattttagcatgaaaaagtctttcatgaaaacatgagat 171  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  32711346 tgaaattttagcatgaaaaagtctttcatgaaaacaagagat 32711305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 9770503 - 9770439
Alignment:
Q  119 ggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||| || |||||||||| ||| ||||| | |||||| ||||||||||||||||||||||||    
T  9770503 ggattttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttcttaggattg 9770439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 9e-70; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 6197641 - 6197455
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6197641 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 6197543  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  6197542 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 6197455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 1391666 - 1391830
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  1391666 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgt 1391764  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  1391765 gggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattg 1391830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 2300872 - 2300738
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2300872 gtctactggtattgaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 2300773  T
Q  148 aagtctttcatgaaaacatgagatttcttaggatt 182  Q
    |||||||||||||||||||||||||||||||||||    
T  2300772 aagtctttcatgaaaacatgagatttcttaggatt 2300738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 29076670 - 29076805
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  29076670 gtctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaa 29076769  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    || |||||||| |||||||||||||| |||||||||    
T  29076770 aaatctttcataaaaacatgagattttttaggattg 29076805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 29111644 - 29111779
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  29111644 gtctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaa 29111743  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    || |||||||| |||||||||||||| |||||||||    
T  29111744 aaatctttcataaaaacatgagattttttaggattg 29111779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 28002707 - 28002893
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28002707 caatcaagactcttaatcacttaaaaaaa-gtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgt 28002805  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |  ||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||       |||||||||||||||    
T  28002806 gaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaagcttcttaggattgtttttttcttttaagattttac 28002893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 31895767 - 31895895
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  31895767 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaa 31895866  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  31895867 aagtctttcatgaaaagatgagatttctt 31895895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 34773485 - 34773608
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||  |||| ||||||| || |||||||||    
T  34773485 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtc 34773584  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    ||||||||||| ||||||||||||    
T  34773585 tttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 7051925 - 7052051
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||||    
T  7051925 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttc 7052024  T
Q  157 atgaaaacatgagatttcttaggattg 183  Q
    || ||| ||||||||||||||| ||||    
T  7052025 ataaaatcatgagatttcttagaattg 7052051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 14262567 - 14262439
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  14262567 gtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 14262468  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||| ||||||||    
T  14262467 aagtctttcatgaaaagatgggatttctt 14262439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 34759184 - 34759056
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  34759184 gtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 34759085  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    || ||||||||||||| ||||||||||||    
T  34759084 aaatctttcatgaaaagatgagatttctt 34759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 7497147 - 7497274
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||| ||||||| ||||| ||||||| || ||||    
T  7497147 gtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggattttgatggattttgt-ggattttgtagtgtaattttaacaagaaa 7497245  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  7497246 aagtctttcatgaaaagatgagatttctt 7497274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 31067569 - 31067682
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||    
T  31067569 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31067658  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    |||||| |||| ||||||||||||    
T  31067659 tttcataaaaagatgagatttctt 31067682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 30385191 - 30385075
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| ||||| ||||||| ||  | |    
T  30385191 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaaca--aca 30385104  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  30385103 aagtctttcatgaaaagatgagatttctt 30385075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 4200541 - 4200443
Alignment:
Q  68 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatg 167  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| |||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 2238668 - 2238717
Alignment:
Q  134 attttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  2238668 attttagtatgaaaaaatctttcatgaaaacatgagatttcttaagattg 2238717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 11113773 - 11113733
Alignment:
Q  142 atgaaaaagtctttcatgaaaacatgagatttcttaggatt 182  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  11113773 atgaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 657065 - 657122
Alignment:
Q  88 tttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    ||||||||||| |||| |||||||||||||||||   ||||||||||||||| ||||||||    
T  657065 tttaataaatctgattctgatggattttgtggga---tttagtgaaattttatcatgaaaa 657122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 3848286 - 3848330
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 97  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||    
T  3848286 gtggtattcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 9e-70; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 41881247 - 41881082
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41881247 caatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 41881148  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41881147 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 41881082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 25331173 - 25331359
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25331173 caatcaagactcttaatcacttaaaaaaa-gtctagtgatattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgt 25331271  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  25331272 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 25331359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 55302885 - 55303049
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  55302885 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatattgt 55302983  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  55302984 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg 55303049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 32951000 - 32950837
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32951000 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgt 32950902  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 182  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  32950901 gggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaagatt 32950837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 1044849 - 1045035
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1044849 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaatcagattttgatggattttgt 1044947  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||       |||||||||||||||    
T  1044948 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttagaattgtttttttcttttaagattttac 1045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 34228718 - 34228561
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  34228718 gtctagtggtattcaaaatcattgaaatttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaa 34228619  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||||||||||||||||||||||||| |||||       |||||||||||||||    
T  34228618 aagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttac 34228561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 41320881 - 41321038
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    ||||||||||| |||||||||||||||||| |||||       |||||||||||||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattgattttttcttttaagattttac 41321038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 12113016 - 12113151
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  12113016 gtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaa 12113115  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||| ||||||    
T  12113116 aagtctttcatgaaaacatgagatttcttgggattg 12113151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 39479485 - 39479333
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  39479485 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtc 39479386  T
Q  153 tttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||||| ||||||||||||||||||||       |||||||||||||||    
T  39479385 tttcatgaaagcatgagatttcttaggattgtttttttcttttaagattttac 39479333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 37046616 - 37046450
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37046616 caatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 37046517  T
Q  118 gggattttttagtg-aaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    || ||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37046516 ggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattg 37046450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 1112935 - 1113099
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  1112935 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgt 1113033  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||  |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1113034 gggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttcttaggattg 1113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 7007416 - 7007580
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7007416 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgt 7007514  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| ||||||||||||||||||||||  | ||||||||||||||||||||||||| |||||    
T  7007515 gggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttcttaagattg 7007580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 42786755 - 42786890
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||| |||    
T  42786755 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttatcataaaa 42786854  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||| |||||    
T  42786855 aagtctttcatgaaaacatgagatttcttatgattg 42786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 30009841 - 30009655
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||    
T  30009841 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcatttaaattttaaatgattgtttaataaatcagattttgatggattttgt 30009743  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||       |||||||||||||||    
T  30009742 gggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttac 30009655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 49 - 205
Target Start/End: Original strand, 3436665 - 3436821
Alignment:
Q  49 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  3436665 tctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaa 3436764  T
Q  149 agtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    ||| |||||||||||||| ||||||||||| ||||       |||||||||||||||    
T  3436765 agtttttcatgaaaacataagatttcttagaattgtttttttcttttaagattttac 3436821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 22202057 - 22202221
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||| ||||||| || ||||||||||||||| | |||||||||||||||||    
T  22202057 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgt 22202155  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  22202156 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatttcttagcattg 22202221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 25446092 - 25446227
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25446092 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgt 25446190  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctt 154  Q
    |||||||||||||||||||||||||||||||||||||    
T  25446191 gggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  148 aagtct 153  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 31314867 - 31314720
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||| |||||||||||||||||||||    
T  31314867 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------tgggattttctagtgaaattttagcatgaaa 31314778  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  31314777 aagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 31314720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 46635774 - 46635648
Alignment:
Q  51 tagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaag 150  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||      |||||||||||||||||||||||||||||||||||||||||    
T  46635774 tagtagtattcaaaatcattcaaatttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaag 46635681  T
Q  151 tctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| ||||||||||||||||||||||||    
T  46635680 tctttcataaaaacatgagatttcttaggattg 46635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 5441475 - 5441603
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  5441475 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 5441574  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  5441575 aagtctttcatgaaaagatgagatttctt 5441603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 27768127 - 27768255
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  27768127 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 27768226  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  27768227 aagtctttcatgaaaagatgagatttctt 27768255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 54341215 - 54341343
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  54341215 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 54341314  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  54341315 aagtctttcatgaaaagatgagatttctt 54341343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 19741043 - 19740929
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  19741043 gtcttgtggtattaaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaa 19740944  T
Q  148 aagtctttcatgaaa 162  Q
    |||||||||||||||    
T  19740943 aagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 28541740 - 28541874
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28541740 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgt 28541838  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtct 153  Q
    || ||||| |||||||||||||||||||||||||||    
T  28541839 ggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 68 - 205
Target Start/End: Complemental strand, 24131097 - 24130959
Alignment:
Q  68 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatg-aaaaagtctttcatgaaaacat 166  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||| ||||||||||||||||    
T  24131097 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacat 24130998  T
Q  167 gagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||||||||||||       |||||||||||||||    
T  24130997 gagatttcttaggattgtttttttcttttaagattttac 24130959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 37828537 - 37828409
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | ||||    
T  37828537 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaa 37828438  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  37828437 aagtctttcatgaaaagatgagatttctt 37828409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 27454243 - 27454078
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||| ||||||||||||        || ||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| |||||||    
T  27454243 caatcaagattcttaatcacttacaaaaaagtttagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgt 27454144  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    || ||||| |||||||||||| ||||||||||||||||||||||||||| | |||| ||| |||||    
T  27454143 ggaattttctagtgaaattttggcatgaaaaagtctttcatgaaaacataatatttgttaagattg 27454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 48261198 - 48261326
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    || ||||||||||||| ||||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttctt 48261326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 51320992 - 51321120
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  ||||| ||||| ||||||| || ||||    
T  51320992 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaa 51321091  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||| ||||||||||| ||||||||||||    
T  51321092 aagtttttcatgaaaagatgagatttctt 51321120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 53275910 - 53276046
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| || | ||||||||||||||||    
T  53275910 gtctagtgatatttaaaatcattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaa 53276009  T
Q  148 aagtctttca-tgaaaacatgagatttcttaggattg 183  Q
    |||||||||| | ||||| | |||||| |||||||||    
T  53276010 aagtctttcattaaaaactttagattttttaggattg 53276046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 54853603 - 54853475
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  54853603 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 54853504  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    || ||||||||||||| ||||||||||||    
T  54853503 aaatctttcatgaaaagatgagatttctt 54853475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 40537280 - 40537161
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||          |||||||||||||||||||||||    
T  40537280 gtggtattcaaaatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtgg----------tgaaattttagcatgaaaaagtc 40537191  T
Q  153 tttcatgaaaacatgagatttcttaggatt 182  Q
    ||||||||||||||||||||||||||||||    
T  40537190 tttcatgaaaacatgagatttcttaggatt 40537161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 37915898 - 37916023
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| | ||||| || ||||    
T  37915898 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaa 37915997  T
Q  148 aagtctttcatgaaaacatgagattt 173  Q
    ||||| |||||||||| || ||||||    
T  37915998 aagtcattcatgaaaagataagattt 37916023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 32322162 - 32322290
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||  | ||||    
T  32322162 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaa 32322261  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    | ||||||||| |||| ||||||||||||    
T  32322262 atgtctttcataaaaagatgagatttctt 32322290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 44770982 - 44770862
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||||||  | ||||||||||    
T  44770982 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtct 44770883  T
Q  154 ttcatgaaaacatgagatttc 174  Q
    |||||||  ||||||||||||    
T  44770882 ttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 9163147 - 9163274
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||| ||||||||||||||||||||     
T  9163147 gtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa- 9163245  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
           ||||||||||||||||||||||| |||||    
T  9163246 -------tcatgaaaacatgagatttcttatgattg 9163274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 23464997 - 23465117
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23464997 caatcaagactcttaatcacttaaaataa-gtctagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgt 23465095  T
Q  118 gggattttttagtgaaatttta 139  Q
    |||||||| |||| ||||||||    
T  23465096 gggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 25504803 - 25504697
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25504803 caatcaagactcttaatcacttaaaaaaa-gtccagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 25504705  T
Q  118 gggatttt 125  Q
    ||||||||    
T  25504704 gggatttt 25504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 23987285 - 23987403
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||          ||||| ||||||| || ||||    
T  23987285 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttg----------tagtgtaattttaacaagaaa 23987374  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  23987375 aagtctttcatgaaaagatgagatttctt 23987403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 8711978 - 8712065
Alignment:
Q  89 ttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttctt 8712065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 41725196 - 41725321
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||   ||  |||||||||| ||||||||||||||| ||||| ||||||| || ||||    
T  41725196 gtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaa 41725292  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    || ||||||||||||| ||||||||||||    
T  41725293 aaatctttcatgaaaagatgagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 11090435 - 11090510
Alignment:
Q  108 tggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattg 11090510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 12913301 - 12913413
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    |||||||||||||||||||||||| |||||||||||||||||||          |||||||||||||||||| ||||||||||||| || |||||||| |    
T  12913301 tggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaagtat 12913390  T
Q  154 ttcatgaaaacatgagatttctt 176  Q
    |||||||| ||||||||||||||    
T  12913391 ttcatgaagacatgagatttctt 12913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 39307388 - 39307253
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||| ||||||||||||||| || |||| |||||| |||    |||||||| ||||||||||||||| ||||||||||||| |||||||    
T  39307388 gtcttgtggtattcataatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaa 39307289  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||| | | || ||||||||||||||||||| ||||    
T  39307288 aagtttctgataaaaacatgagatttcttagaattg 39307253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 56445474 - 56445362
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    |||||||||||||||||||||||||||| |||||||||||||||          |||||||||||||||||| |||||||| ||||||| ||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  154 ttcatgaaaacatgagatttctt 176  Q
    ||||| || ||||||||||||||    
T  56445384 ttcataaagacatgagatttctt 56445362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 24736447 - 24736534
Alignment:
Q  89 ttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||  ||||||||||||||||||| |||||| ||||||||||||| || ||| |||||||||||||||||||||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttctt 24736534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 36479366 - 36479249
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||||||  ||||||||||||           ||||||||||||||||||||  |||    
T  36479366 gtctcgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttgatgga-----------tttttagtgaaattttagcaaaaaa 36479278  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||| ||||||||||||||||||||    
T  36479277 aagtcttttatgaaaacatgagatttctt 36479249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 30967434 - 30967316
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||    
T  30967434 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaa 30967345  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    || ||||||||||||| || |||||||||    
T  30967344 aaatctttcatgaaaaaataagatttctt 30967316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 29649802 - 29649731
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 119  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||    
T  29649802 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 28371001 - 28371086
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaatttta 139  Q
    ||||||||||||||||||||||||  ||||||||||||||||||   |||||| || ||||||||||||||| |||||||||||||    
T  28371001 tggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 20021424 - 20021531
Alignment:
Q  68 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagc-atgaaaaagtctttcatgaaaacat 166  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||| |||||||||||| |||||||||| | |  ||||| ||||||||||| ||||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacat 20021523  T
Q  167 gagatttc 174  Q
     |||||||    
T  20021524 aagatttc 20021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 28483970 - 28484093
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||          |||||||||| ||||||| ||||| || |||| || ||||    
T  28483970 gtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat----------tggattttgtaggattttgtagtgtaa-tttaacaagaaa 28484058  T
Q  148 aagtctttcatgaaaacatgagatttcttaggatt 182  Q
    |||||||||||||||| | ||||||||||| ||||    
T  28484059 aagtctttcatgaaaagacgagatttcttaagatt 28484093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 41581923 - 41581795
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatg-aa 146  Q
    |||| |||||||| | | |||||||||||| |||  ||||||||||||||  ||||  |||  ||||||||||||||| ||||||||||||| |||| ||    
T  41581923 gtctcgtggtatttagagtcattcaaattttgaataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaa 41581826  T
Q  147 aaagtctttcatgaaaacatgagatttctta 177  Q
    ||| | ||||||| |||||||||||||||||    
T  41581825 aaaatatttcatgtaaacatgagatttctta 41581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 5800049 - 5800164
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||          ||||||||||| |||||| ||| | ||||||| || ||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggattttgtgagattttgtagagtaattttaacaagaaa 5800138  T
Q  148 aagtctttcatgaaaacatgagattt 173  Q
    |||||||| ||||||| || ||||||    
T  5800139 aagtctttaatgaaaagataagattt 5800164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 32684123 - 32684065
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  32684123 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 49834948 - 49834890
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  49834948 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 49501646 - 49501526
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||          |||||||||||| ||||| ||||| ||||||| || ||||    
T  49501646 gtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtggaattttgtagtgtaattttaacaagaaa 49501557  T
Q  148 aagtctttc--atgaaaacatgagatttctt 176  Q
    |||||||||  || |||| ||||||||||||    
T  49501556 aagtctttcatataaaaagatgagatttctt 49501526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 49507711 - 49507591
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||          |||||||||||| ||||| ||||| ||||||| || ||||    
T  49507711 gtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtggaattttgtagtgtaattttaacaagaaa 49507622  T
Q  148 aagtctttc--atgaaaacatgagatttctt 176  Q
    |||||||||  || |||| ||||||||||||    
T  49507621 aagtctttcatataaaaagatgagatttctt 49507591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 50018322 - 50018437
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||| ||||||||||||| |||||||||||||||||||   ||||| ||||||||||          ||||| ||||||| || ||||    
T  50018322 gtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatggattttg----------tagtgtaattttaacaagaaa 50018411  T
Q  148 aagtctttcatgaaaacatgagattt 173  Q
    |||||||||| ||||| |||||||||    
T  50018412 aagtctttcaagaaaagatgagattt 50018437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 36728023 - 36727960
Alignment:
Q  109 ggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 173  Q
    ||||||||| ||||||||||||||||||||| || |||||| ||||||||| | |||||||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattt 36727960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 12193135 - 12193227
Alignment:
Q  83 gattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 175  Q
    ||||||||||||| |   |||||| |||||||||||||| | ||||||||| ||| ||||| ||||| |||| ||| ||||||  ||||||||    
T  12193135 gattgtttaataagttgaattttggtggattttgtgggaatatttagtgaattttcagcataaaaaaatcttacattaaaacacaagatttct 12193227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 13400935 - 13400814
Alignment:
Q  56 gtattcaaaatcattcaaatttcgaaggattgtttaa--taaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    ||||| |||| ||||| ||||| || |||| ||||||  |||||  | |||||||| |||||||| ||||||||| ||||| |||  ||| ||||| |||    
T  13400935 gtattgaaaaacattctaattttgagggatagtttaaaataaattgggttttgatgaattttgtgagattttttaatgaaaatttttcataaaaaaatct 13400836  T
Q  154 ttcatgaaaacatgagatttct 175  Q
    |  || ||||||||||||||||    
T  13400835 tctattaaaacatgagatttct 13400814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 32684064 - 32684018
Alignment:
Q  127 tagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 173  Q
    ||||| ||||||| || |||||||||||||||||||| |||||||||    
T  32684064 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 32684018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 55047674 - 55047641
Alignment:
Q  142 atgaaaaagtctttcatgaaaacatgagatttct 175  Q
    ||||||||||||||||||||||||||| ||||||    
T  55047674 atgaaaaagtctttcatgaaaacatgatatttct 55047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 9e-70; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 16269735 - 16269921
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16269735 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 16269833  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  16269834 gggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 16269921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 24776399 - 24776563
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776399 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 24776497  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776498 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 24776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 20605280 - 20605466
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20605280 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttgt 20605378  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  20605379 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 20605466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 31170790 - 31170604
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31170790 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgt 31170692  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  31170691 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 31170604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 14198743 - 14198557
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14198743 caatcaagactcttaatcacttaaaaaaa-gtccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 14198645  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||    
T  14198644 gggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 14198557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 48 - 205
Target Start/End: Original strand, 12407453 - 12407610
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  12407453 gtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaa 12407552  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||||||||||||||||||||||||| |||||       |||||||||||||||    
T  12407553 aagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttac 12407610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 35317106 - 35317264
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35317106 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 35317204  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 177  Q
    || ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35317205 ggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctta 35317264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 43847690 - 43847876
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43847690 caatcaagactcttaatcacttaaaaaaa-gtctagttgtattcaaaatcattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgt 43847788  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    || ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||||||||    
T  43847789 ggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 43847876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 5093184 - 5093049
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  5093184 gtctagtagtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 5093085  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||| ||||||||||||||||||||||||    
T  5093084 aagtctttcataaaaacatgagatttcttaggattg 5093049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 305631 - 305445
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  305631 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgt 305533  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    | |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  305532 gagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttatttcttttaagattttac 305445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 32125330 - 32125455
Alignment:
Q  52 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagt 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  32125330 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagt 32125429  T
Q  152 ctttcatgaaaacatgagatttctta 177  Q
    |||||||||||| |||||||||||||    
T  32125430 ctttcatgaaaatatgagatttctta 32125455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 22551900 - 22551743
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| ||||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  22551900 gtctagtggtattcaaaattattcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaa 22551801  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||| ||||||||||||||||||||||||| |||||       |||||||||||||||    
T  22551800 aagtatttcatgaaaacatgagatttcttatgattgttttttccttttaagattttac 22551743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 48 - 163
Target Start/End: Original strand, 1789515 - 1789630
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  1789515 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 1789614  T
Q  148 aagtctttcatgaaaa 163  Q
    ||||||||||| ||||    
T  1789615 aagtctttcatcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 49 - 205
Target Start/End: Original strand, 9120200 - 9120356
Alignment:
Q  49 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    ||||||| |||||||||||||||| ||||  |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||| |||    
T  9120200 tctagtgatattcaaaatcattcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaa 9120299  T
Q  149 agtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    | |||||||||||||||||||||||||||||||||       |||||||||||||||    
T  9120300 aatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 9120356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 44765848 - 44765974
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||        
T  44765848 gtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcat---- 44765943  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
         |||||||||||||||||||||||||||||||    
T  44765944 -----tttcatgaaaacatgagatttcttaggattg 44765974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 28844628 - 28844756
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||  | ||||    
T  28844628 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaa 28844727  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    ||||||||||| |||| ||||||||||||    
T  28844728 aagtctttcataaaaagatgagatttctt 28844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 33135696 - 33135823
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  33135696 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 33135795  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    ||||||||||| |||| ||||||||||||    
T  33135796 aagtctttcat-aaaaaatgagatttctt 33135823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 10657479 - 10657607
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  10657479 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 10657578  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||| ||||||||||| |||| |||||||    
T  10657579 aagtatttcatgaaaagatgaaatttctt 10657607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 18177345 - 18177468
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    ||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  18177345 gtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 18177444  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    ||| || |||| ||||||||||||    
T  18177445 tttaataaaaagatgagatttctt 18177468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 25288237 - 25288360
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || || || |||    
T  25288237 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtc 25288336  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    ||||||||||| ||||||||||||    
T  25288337 tttcatgaaaagatgagatttctt 25288360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 26788859 - 26788969
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  26788859 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 26788958  T
Q  148 aagtctttcat 158  Q
    |||||||||||    
T  26788959 aagtctttcat 26788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 65 - 176
Target Start/End: Original strand, 43078653 - 43078764
Alignment:
Q  65 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaac 164  Q
    ||||||||||||||||| |||||||||||||||  |||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||||| ||||     
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  165 atgagatttctt 176  Q
    || |||||||||    
T  43078753 ataagatttctt 43078764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 10125418 - 10125302
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||||||||||||||| ||||||||||||||||||          || ||||||||||||||||||||||||||||| || |||||||||||||    
T  10125418 tattcaaaatcattcaaatttcaaaggattgtttaataaat----------tgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttc 10125329  T
Q  157 atgaaaacatgagatttcttaggattg 183  Q
    || |||||| ||||||||||| |||||    
T  10125328 ataaaaacacgagatttcttaagattg 10125302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 28740420 - 28740302
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || ||||    
T  28740420 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaa 28740331  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    ||||||||||| |||| ||||||||||||    
T  28740330 aagtctttcataaaaagatgagatttctt 28740302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 13833553 - 13833441
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    |||||||||||||||||||||||| |||||||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||    
T  13833553 tggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 13833464  T
Q  154 ttcatgaaaacatgagatttctt 176  Q
    ||||||| || ||||||||||||    
T  13833463 ttcatgacaagatgagatttctt 13833441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 7026677 - 7026746
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  7026677 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 3463745 - 3463863
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||| |||||||||||| |||| ||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  3463745 gtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 3463834  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  3463835 aagtctttcatgaaaatatgagatttctt 3463863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 379016 - 379079
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||    
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 26601332 - 26601270
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 115  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||  |||||||    
T  26601332 gtggtattcaaaatcattcaaatttcgaatgtttgtttaataaatcagattttgtgggatttt 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 3574920 - 3574978
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  3574920 gtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 6224684 - 6224626
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||||||  |||||||    
T  6224684 gtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 6224633 - 6224576
Alignment:
Q  119 ggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 176  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  6224633 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 21370687 - 21370638
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 97  Q
    |||| ||||||||||||||||||||||||| |||| ||||||| ||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 215303 - 215249
Alignment:
Q  119 ggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 174  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||    
T  215303 ggattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttc 215249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 215362 - 215320
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgttt 90  Q
    |||| |||||||||||||||||||||| ||| |||||||||||    
T  215362 gtctcgtggtattcaaaatcattcaaacttcaaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 4e-69; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 21147110 - 21147274
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21147110 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 21147208  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21147209 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 21147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 7016902 - 7016716
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7016902 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 7016804  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||       |||||||||||||||    
T  7016803 gggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaattgtttttttcttttaagattttac 7016716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 49 - 183
Target Start/End: Complemental strand, 33656174 - 33656040
Alignment:
Q  49 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33656174 tctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 33656075  T
Q  149 agtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||| |||||||||||||||||||    
T  33656074 agtctttcatgaaaatatgagatttcttaggattg 33656040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 5273053 - 5272924
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5273053 gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 5272954  T
Q  148 aagtctttcatgaaaacatgagatttctta 177  Q
    ||||||||||| ||||||||||||||||||    
T  5272953 aagtctttcataaaaacatgagatttctta 5272924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 27459112 - 27458927
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||    
T  27459112 caatcaagactcttaatcacttaaaaaa--gtctagtggtattcaaaatcattcagattttgaaggattgtttaataaattagattttgatggattttgt 27459015  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||       |||||||||||||||    
T  27459014 gggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatttcttaggattgtttttttcttttaagattttac 27458927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 163
Target Start/End: Original strand, 849190 - 849334
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  849190 caatcaagactcttaatcacttaaaaaaa-gtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgt 849288  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaa 163  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  849289 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 48 - 177
Target Start/End: Original strand, 139345 - 139474
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||  ||||||||||||  ||||||    
T  139345 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaa 139444  T
Q  148 aagtctttcatgaaaacatgagatttctta 177  Q
    ||||||||||| ||||||||||||||||||    
T  139445 aagtctttcataaaaacatgagatttctta 139474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 32158031 - 32157899
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||| ||||    
T  32158031 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaa 32157932  T
Q  148 a---agtctttcatgaaaacatgagatttctta 177  Q
    |   |||||||||||||||||||||||||||||    
T  32157931 aaatagtctttcatgaaaacatgagatttctta 32157899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 14000239 - 14000111
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  14000239 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 14000140  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  14000139 aagtctttcatgaaaagatgagatttctt 14000111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 1152237 - 1152102
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  1152237 gtcttgtggtattcaaaatcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 1152138  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| ||||||| ||||||||||||| |||||    
T  1152137 aagtcttttatgaaaagatgagatttcttaagattg 1152102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 13926003 - 13926131
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  13926003 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 13926102  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||| ||||| |||| |||||||    
T  13926103 aagtctttcaagaaaagatgatatttctt 13926131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 39852417 - 39852545
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||| ||||||||| ||||| ||||||| || ||||    
T  39852417 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaa 39852516  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  39852517 aagtctttcatgaaaagatgagatttctt 39852545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 48 - 173
Target Start/End: Complemental strand, 4550391 - 4550266
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || ||||    
T  4550391 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaa 4550292  T
Q  148 aagtctttcatgaaaacatgagattt 173  Q
     ||||||||||||||| |||||||||    
T  4550291 gagtctttcatgaaaagatgagattt 4550266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 6460865 - 6460965
Alignment:
Q  49 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  6460865 tctagtggtattcaaaatcattcaaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaa 6460964  T
Q  149 a 149  Q
    |    
T  6460965 a 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 57 - 176
Target Start/End: Complemental strand, 7947698 - 7947579
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||    
T  7947698 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttc 7947599  T
Q  157 atgaaaacatgagatttctt 176  Q
    ||||||| | ||||||||||    
T  7947598 atgaaaagaagagatttctt 7947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 9689730 - 9689864
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||| ||||||||| |||||||||| |||||||| |||||| ||||||||||||||| |||| |||||| | || ||||||||  ||||||    
T  9689730 gtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatggattgtgtgagattttcttgtaaaattttattatgaaa 9689828  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||| ||||||| |||||||||| |||||    
T  9689829 aagtctttcataaaaacataagatttcttatgattg 9689864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 5949185 - 5949298
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||    
T  5949185 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtc 5949274  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    ||||||||||| ||||||||||||    
T  5949275 tttcatgaaaagatgagatttctt 5949298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 48 - 143
Target Start/End: Complemental strand, 14465361 - 14465266
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcat 143  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||| ||||| |||| | ||||||||||    
T  14465361 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatgaattttgtggaattttctagtaatattttagcat 14465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 4240586 - 4240468
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  4240586 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 4240497  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||| | ||||||||||||    
T  4240496 aagtctttcatgaatagatgagatttctt 4240468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 22746369 - 22746496
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||||||||   |||||||||||||||||||||        || ||||||| || ||||    
T  22746369 gtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtggga--------tgtaattttaacaagaaa 22746460  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    || ||||||||||||| || |||||||||| |||||    
T  22746461 aactctttcatgaaaagataagatttcttaagattg 22746496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 1461263 - 1461203
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  1461263 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 1461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 176
Target Start/End: Complemental strand, 40013827 - 40013718
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttc 156  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||||||          ||||| ||||||| || |||||||||||||    
T  40013827 tattcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggattttg----------tagtgtaattttaacaagaaaaagtctttc 40013738  T
Q  157 atgaaaacatgagatttctt 176  Q
    ||||||| ||||||||||||    
T  40013737 atgaaaagatgagatttctt 40013718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 9220832 - 9220716
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||||||||||||||| |||||||||||||| ||| ||| ||||          | ||||||| |||| |||||||| || |||||||||||||    
T  9220832 tattcaaaatcattcaaatttctaaggattgtttaatgaattagaatttg----------taggattttatagtaaaattttaacacgaaaaagtctttc 9220743  T
Q  157 atgaaaacatgagatttcttaggattg 183  Q
     ||||||||||| ||||||||||||||    
T  9220742 gtgaaaacatgatatttcttaggattg 9220716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 37013993 - 37014044
Alignment:
Q  55 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    ||||||||||||||||||||||||||||| |||||||||||||  |||||||    
T  37013993 ggtattcaaaatcattcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 1511426 - 1511349
Alignment:
Q  108 tggattttgtgggatt-ttttagtgaaattttagcatg-aaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||||||||||| |||||||||  |||| ||||| ||||| ||||| |||||||||| |||||| |||||||||    
T  1511426 tggattttgtgggatttttttagtgagtttttggcatgaaaaaaatcttttatgaaaacataagattttttaggattg 1511349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 37014037 - 37014094
Alignment:
Q  119 ggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 176  Q
    ||||||| ||||  ||||||| || ||||||||||||||| |||| ||||||||||||    
T  37014037 ggattttgtagtataattttaacaagaaaaagtctttcataaaaagatgagatttctt 37014094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 43581253 - 43581090
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43581253 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 43581155  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 182  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43581154 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 43581090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 7718525 - 7718361
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7718525 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 7718427  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7718426 gggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattg 7718361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 40996783 - 40996626
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  40996783 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaa 40996684  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  40996683 aagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 40996626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 49 - 183
Target Start/End: Complemental strand, 7719393 - 7719259
Alignment:
Q  49 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7719393 tctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 7719294  T
Q  149 agtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||    
T  7719293 agtctttcatgaaaacatgagatttcttaggattg 7719259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 51 - 205
Target Start/End: Original strand, 973260 - 973414
Alignment:
Q  51 tagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaag 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  973260 tagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaag 973359  T
Q  151 tctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||    
T  973360 tctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 973414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 18914898 - 18914712
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  18914898 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgt 18914800  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  18914799 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 18914712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 30440840 - 30441026
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30440840 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 30440938  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||       |||||||||||||||    
T  30440939 gggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttcttaggattgtttttttcttttaagattttac 30441026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 34695317 - 34695503
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34695317 caatcaagactcttaatcacttaaaaaaa-gtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 34695415  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  34695416 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 34695503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 47914310 - 47914496
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  47914310 caatcaagactcttaatcacttaaaaaaa-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgt 47914408  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       |||||||||||||||    
T  47914409 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttac 47914496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 51 - 183
Target Start/End: Complemental strand, 44343527 - 44343395
Alignment:
Q  51 tagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaag 150  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44343527 tagtggtatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaag 44343428  T
Q  151 tctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||| |||||||||||||||||||||||||    
T  44343427 tctttcacgaaaacatgagatttcttaggattg 44343395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 12893481 - 12893616
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  12893481 gtctaatggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaa 12893580  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||    
T  12893581 aagtctttcatgaaaacatgagatttcttaggattg 12893616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 54 - 205
Target Start/End: Complemental strand, 20275391 - 20275240
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20275391 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 20275292  T
Q  154 ttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
     |||||||| ||||||||||||||| ||||       |||||||||||||||    
T  20275291 gtcatgaaagcatgagatttcttagcattgtttttttcttttaagattttac 20275240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 47879212 - 47879398
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  47879212 caatcaagactcttaatcacttaaaaaaa-gtctagtgatattcaaaatcattcaaatttaaaaggattgtttaataaatcagattttgatggattttgt 47879310  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       |||||||||||||||    
T  47879311 ggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttac 47879398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 32143046 - 32142916
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 32142947  T
Q  153 tttcatgaaaacatgagatttcttaggattg 183  Q
    || ||| |||||||||||||||||| |||||    
T  32142946 ttccataaaaacatgagatttcttaagattg 32142916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 50 - 205
Target Start/End: Original strand, 34009088 - 34009243
Alignment:
Q  50 ctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||||||||||| |||||    
T  34009088 ctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaa 34009187  T
Q  150 gtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||       |||||||||||||||    
T  34009188 gtctttcaagaaaacatgagatttcttaggattgtttttttcttttaagattttac 34009243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 39219539 - 39219354
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||| |||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||    
T  39219539 caatcaagactcttaatcacttaaaaaaa-gtctattggtattcaaaatcattcaaattttgatg-attgtttaataaatcagattttgatggattttgt 39219442  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||    
T  39219441 gggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagattttac 39219354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 52 - 183
Target Start/End: Original strand, 7113529 - 7113660
Alignment:
Q  52 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagt 151  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||  ||||||||||||||||||||    
T  7113529 agtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagt 7113628  T
Q  152 ctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||| ||||||||||||||    
T  7113629 ctttcatgaaaacatgaaatttcttaggattg 7113660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 10068533 - 10068668
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  10068533 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaa 10068632  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||| |||||| |||||||||||||| |||||||||    
T  10068633 aagtatttcataaaaacatgagatttgttaggattg 10068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 43679491 - 43679592
Alignment:
Q  52 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagt 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43679491 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 43679590  T
Q  152 ct 153  Q
    ||    
T  43679591 ct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 23101364 - 23101492
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  23101364 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 23101463  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  23101464 aagtctttcatgaaaagatgagatttctt 23101492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 28342413 - 28342541
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  28342413 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 28342512  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  28342513 aagtctttcatgaaaagatgagatttctt 28342541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 3022992 - 3023120
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  3022992 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 3023091  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||| ||||||||||| ||||||||||||    
T  3023092 aagtttttcatgaaaagatgagatttctt 3023120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 29614898 - 29614770
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  29614898 gtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 29614799  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  29614798 aagtctttcatgaaaagatgagatttctt 29614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 39784165 - 39784293
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  39784165 gtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 39784264  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  39784265 aagtctttcatgaaaagatgagatttctt 39784293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 18838455 - 18838583
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  18838455 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 18838554  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||| ||||||||||| ||||||||||||    
T  18838555 aagtatttcatgaaaagatgagatttctt 18838583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 28034939 - 28034811
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||  |||    
T  28034939 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaa 28034840  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  28034839 aagtctttcatgaaaagatgagatttctt 28034811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 12963767 - 12963874
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| | ||||    
T  12963767 gtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaa 12963866  T
Q  148 aagtcttt 155  Q
    ||||||||    
T  12963867 aagtcttt 12963874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 33382709 - 33382828
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    ||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||    
T  33382709 tggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 33382808  T
Q  154 ttcatgaaaacatgagattt 173  Q
    || ||||||| |||||||||    
T  33382809 tttatgaaaagatgagattt 33382828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 7993214 - 7993336
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||| ||||||||||| ||||| ||||||| || ||||||||||    
T  7993214 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtct 7993313  T
Q  154 ttcatgaaaacatgagatttctt 176  Q
    |||||||||| || |||||||||    
T  7993314 ttcatgaaaagataagatttctt 7993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 54 - 183
Target Start/End: Complemental strand, 43187485 - 43187356
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    |||||||||||||||||||||||| |||| ||||||||||||||  |||||||||| ||||||| ||||||| ||||||||||||| || ||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  154 ttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| ||||||||||| || ||||||    
T  43187385 ttcatgaagacatgagattttttgggattg 43187356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 8675399 - 8675527
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  8675399 gtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 8675498  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    || ||||| ||||||| ||||||||||||    
T  8675499 aaatcttttatgaaaagatgagatttctt 8675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 9882370 - 9882243
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | ||||    
T  9882370 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaa 9882271  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    ||||||||||| |||| ||||||||||||    
T  9882270 aagtctttcat-aaaaaatgagatttctt 9882243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 12740439 - 12740573
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || || |    
T  12740439 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaatg-gattttgatagattttgtgggattttatagtgtaattttaacaagaga 12740537  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||| |||| ||||||||||||| |||||    
T  12740538 aagtctttcataaaaagatgagatttcttaagattg 12740573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 49 - 164
Target Start/End: Original strand, 727587 - 727692
Alignment:
Q  49 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||          |||||||||||||||| ||||||||||||||||||||||    
T  727587 tctagtagtattcaaaatcattcaaatttcaaaggattgtttaataaatca----------gattttgtgggattttctagtgaaattttagcatgaaaa 727676  T
Q  149 agtctttcatgaaaac 164  Q
    ||||||||||||||||    
T  727677 agtctttcatgaaaac 727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 9179946 - 9180071
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||| |||||||| | ||||| ||||||||||||||||||||          |||||||||||||||||| ||||||| ||||||||| |||    
T  9179946 gtcttgtggtatacaaaatcacttaaattccgaaggattgtttaataaat----------tggattttgtgggattttctagtgaatttttagcataaaa 9180035  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||    
T  9180036 aagtctttcatgaaaacatgagatttcttaggattg 9180071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 37972981 - 37972873
Alignment:
Q  68 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatg 167  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || |||||||||||||||||||| |||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  168 agatttctt 176  Q
    ||| |||||    
T  37972881 agacttctt 37972873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 25805763 - 25805862
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    ||||||||||||||||||||||||||| |||||||||||||||||   ||| ||||||||||||||||||||| || | |||||||||||||||||||||    
T  25805763 gtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 31638948 - 31639015
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31638948 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 41827390 - 41827498
Alignment:
Q  68 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatg 167  Q
    ||||||| || |||||||||||||||||||  |||||||||||||||||||||||| | ||||| ||||||| || ||||| |||||||||||||| |||    
T  41827390 attcaaaatttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatg 41827489  T
Q  168 agatttctt 176  Q
    |||||||||    
T  41827490 agatttctt 41827498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 173
Target Start/End: Complemental strand, 44256895 - 44256775
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  ||||| |||| ||||||| |||||||  |||| ||||||| || ||||||||     
T  44256895 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtt 44256796  T
Q  153 tttcatgaaaacatgagattt 173  Q
    |||||| |||| |||||||||    
T  44256795 tttcatcaaaatatgagattt 44256775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 3797191 - 3797066
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||| |||||| |||||| ||||||||||||||||||| ||||||||||||         |||||| |||||||||||||||||||||    
T  3797191 gtcttgtggtattcaagatcattaaaattttgaaggattgtttaataaattagattttgatgg---------gattttctagtgaaattttagcatgaaa 3797101  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| | |||||||| ||||||||||||||||    
T  3797100 aagtcttttaagaaaacat-agatttcttaggattg 3797066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 176
Target Start/End: Original strand, 19810874 - 19810983
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||||||||||||||| || |||||||||||||||          |||||||||||| ||||| ||||||||||||||||| |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat----------tggattttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  157 atgaaaacatgagatttctt 176  Q
    ||||||||||||||||||||    
T  19810964 atgaaaacatgagatttctt 19810983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 32883848 - 32883948
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||| |||||||||| ||||| ||||||| || ||||    
T  32883848 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaa 32883947  T
Q  148 a 148  Q
    |    
T  32883948 a 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 19251605 - 19251729
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||          |||||||||  ||||||| | ||||||||||||||  |||    
T  19251605 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgatggattttcttgtgaaattttagcaataaa 19251694  T
Q  148 aagtctttcatgaaaacatgagatttcttaggatt 182  Q
    ||||||||||||||||| ||| ||||||| |||||    
T  19251695 aagtctttcatgaaaacctgaaatttcttgggatt 19251729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 509722 - 509840
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||          |||||  |||||| || ||||    
T  509722 gtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattggattttgatggattttg----------tagtgggattttaacaagaaa 509811  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  509812 aagtctttcatgaaaagatgagatttctt 509840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 40460841 - 40460723
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  40460841 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 40460752  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    || ||||||||||||| ||||||||||||    
T  40460751 aaatctttcatgaaaatatgagatttctt 40460723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 173
Target Start/End: Complemental strand, 44122029 - 44121919
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||    
T  44122029 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtc 44121940  T
Q  153 tttcatgaaaacatgagattt 173  Q
    ||| ||||||| |||||||||    
T  44121939 tttaatgaaaagatgagattt 44121919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 139
Target Start/End: Complemental strand, 10676546 - 10676463
Alignment:
Q  56 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaatttta 139  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||| ||||| | |||||||||||    
T  10676546 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttggatggattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 46405565 - 46405494
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 119  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||||||||    
T  46405565 gtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatggattttgtgg 46405494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 37327993 - 37328062
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||    
T  37327993 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttgt 37328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 1470362 - 1470213
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    ||||||||||||||| |||||||||  ||| |||||||||| ||| |||||||||| | |||||||||||||| |  | |||||||||||||||||| ||    
T  1470362 gtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaatc 1470264  T
Q  153 tttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||  |||||||  |||||||| ||| ||||       |||||||||||||||    
T  1470263 ttttttgaaaac--gagatttcctagcattgtttttttcttttaagattttac 1470213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 29585586 - 29585698
Alignment:
Q  54 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtct 153  Q
    |||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||          |||| ||||||| || ||||||||||    
T  29585586 tggtattcaaaatcattcaaattttgaaggattgtttaataatttggattttgatggattttgt----------agtgtaattttaacaagaaaaagtct 29585675  T
Q  154 ttcatgaaaacatgagatttctt 176  Q
    ||||| |||| |||| |||||||    
T  29585676 ttcataaaaagatgaaatttctt 29585698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 47066770 - 47066828
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 17001152 - 17001099
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  17001152 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 166
Target Start/End: Original strand, 10617024 - 10617102
Alignment:
Q  88 tttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacat 166  Q
    |||||||||| |||||||||||||||||||| |||||| |||||| ||||||| |  || ||||||||||| |||||||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacat 10617102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 173
Target Start/End: Complemental strand, 33892384 - 33892269
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||| ||||||| |||||||  |||||| ||| ||||||          ||||| ||||||| || ||||    
T  33892384 gtcttgtggtattcaaaatcattcaaatttcgaatgattgttaaataaattggatttttatgaattttg----------tagtgtaattttaacaagaaa 33892295  T
Q  148 aagtctttcatgaaaacatgagattt 173  Q
    ||||||||||| |||| |||||||||    
T  33892294 aagtctttcattaaaagatgagattt 33892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 117
Target Start/End: Original strand, 39028163 - 39028232
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    |||| ||| ||||||||||| |||||||| |||| |||||||||||||||  ||||||||||||||||||    
T  39028163 gtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattggattttgatggattttgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 447854 - 447913
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 112  Q
    |||||||| |||||||||||||||||||| ||||||||||| |||  |||||||||||||    
T  447854 gtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 44623357 - 44623295
Alignment:
Q  111 attttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 173  Q
    ||||||||| ||||| |||||||||||||| |||||||||||| |||| |||| |||| ||||    
T  44623357 attttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatgatattt 44623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 17001106 - 17001049
Alignment:
Q  119 ggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 176  Q
    ||||||| ||||| |||| || || |||||||||||||||||||| ||||||||||||    
T  17001106 ggattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttctt 17001049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 6e-68; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 50192715 - 50192528
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50192715 caatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 50192616  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||       |||||||||||||||    
T  50192615 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattttttaggattgtttttttcttttaagattttac 50192528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 21222183 - 21222369
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  21222183 caatcaagactcttaatcacttaaaaaaa-gtctagaggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgt 21222281  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  21222282 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttattttcttttaagattttac 21222369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 19451943 - 19451786
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  19451943 gtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 19451844  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||||||||||||||||||||||||| |||||       |||||||||||||||    
T  19451843 aagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttac 19451786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 52 - 205
Target Start/End: Complemental strand, 49198400 - 49198247
Alignment:
Q  52 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagt 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  49198400 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 49198301  T
Q  152 ctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    ||||||||||||||||| ||||||||||||||       |||||||||||||||    
T  49198300 ctttcatgaaaacatgatatttcttaggattgtttttttcttttaagattttac 49198247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 6304387 - 6304252
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6304387 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 6304288  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||| |||||||| |||||    
T  6304287 aagtctttcatgaaaacatgaaatttcttatgattg 6304252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 45760173 - 45759987
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45760173 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgt 45760075  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||       |||||||||||||||    
T  45760074 gggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 45759987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 47654516 - 47654329
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||| ||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47654516 caatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 47654417  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    || ||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||       |||||||||||||||    
T  47654416 ggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 47654329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 35279737 - 35279872
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||    
T  35279737 gtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaa 35279836  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||| ||||    
T  35279837 aagtctttcatgaaaacatgagatttcttagaattg 35279872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 53 - 205
Target Start/End: Complemental strand, 31572327 - 31572175
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  31572327 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtc 31572228  T
Q  153 tttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||||| ||||||||||||||| ||||       |||||||||||||||    
T  31572227 tttcatgaaatcatgagatttcttagaattgtttttttcttttaagattttac 31572175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 35679258 - 35679128
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  35679258 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtc 35679159  T
Q  153 tttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||| ||||||||||||||| |||||    
T  35679158 tttcatgaagacatgagatttcttaagattg 35679128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 45536009 - 45536150
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45536009 gtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 45536108  T
Q  148 aagtctttcat------gaaaacatgagatttcttaggattg 183  Q
    |||||||||||      |||||||||||||||||||||||||    
T  45536109 aagtctttcatgaaaacgaaaacatgagatttcttaggattg 45536150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 49418149 - 49418279
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  49418149 gtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaa 49418248  T
Q  148 aagtctttcatgaaaacatgagatttcttag 178  Q
    || ||||||||||||| ||||||||||||||    
T  49418249 aaatctttcatgaaaatatgagatttcttag 49418279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 28824536 - 28824351
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28824536 caatcaagactcttaatcacttaaaaaca-gtcttgtggtattcaaaatcattcaaatttcgaag-attgtttaataaatcagattttgatggattttgt 28824439  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| ||| ||||||||| ||||||||||||||| || ||||||||||||||||||||||||       |||||||||||||||    
T  28824438 gggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttcttaggattgtttttttcttttaagattttac 28824351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 47780747 - 47780933
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||    
T  47780747 caatcaagactcttaatcacttaaaaaaa-gtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagattttgatggattttgt 47780845  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||       |||||||||||||||    
T  47780846 gggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttac 47780933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 48 - 173
Target Start/End: Complemental strand, 32589088 - 32588963
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||| |||    
T  32589088 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaa 32588989  T
Q  148 aagtctttcatgaaaacatgagattt 173  Q
    ||||||||||||||||||||||||||    
T  32588988 aagtctttcatgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 6312639 - 6312767
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  6312639 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 6312738  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  6312739 aagtctttcatgaaaagatgagatttctt 6312767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 29396523 - 29396395
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  29396523 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 29396424  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  29396423 aagtctttcatgaaaagatgagatttctt 29396395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 9577567 - 9577432
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||||| ||||||    
T  9577567 gtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaa 9577468  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    || |||||||||||||||||||||||||| ||||||    
T  9577467 aaatctttcatgaaaacatgagatttcttgggattg 9577432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 49 - 183
Target Start/End: Original strand, 29556170 - 29556305
Alignment:
Q  49 tctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaa 148  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||| || |||||||||||| ||||||    
T  29556170 tctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggattttatgggattttctaatgaaattttagcttgaaaa 29556269  T
Q  149 agtctttcatgaaa-acatgagatttcttaggattg 183  Q
    ||||||| |||||| |||||||||||||||||||||    
T  29556270 agtcttttatgaaacacatgagatttcttaggattg 29556305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 51701645 - 51701770
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  51701645 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 51701744  T
Q  148 aagtctttcatgaaaacatgagattt 173  Q
    |||||||||||||||| |||||||||    
T  51701745 aagtctttcatgaaaagatgagattt 51701770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 48177597 - 48177469
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  48177597 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48177498  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  48177497 aagtctttcatgaaaagatgagatttctt 48177469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 730184 - 730314
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  730184 caatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgt 730283  T
Q  118 gggattttttagtgaaattttagcatgaaaa 148  Q
    | |||||| ||||||||||||||||||||||    
T  730284 gagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 25612222 - 25612350
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| || ||||    
T  25612222 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaa 25612321  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  25612322 aagtctttcatgaaaagatgagatttctt 25612350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 9322630 - 9322507
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    ||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||||||| ||||||||| ||||| ||||||| || |||||||||    
T  9322630 gtggtattcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 9322531  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    ||||||||||| ||||||||||||    
T  9322530 tttcatgaaaagatgagatttctt 9322507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 15835183 - 15835060
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||||||||| | ||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||||| || |||||||||    
T  15835183 gtggtattcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 15835084  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    ||||||||||| ||||||||||||    
T  15835083 tttcatgaaaagatgagatttctt 15835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 37014775 - 37014640
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||| |||||||||||||||||||||| || |||||||| ||||||   ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  37014775 gtcttgtgatattcaaaatcattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaa 37014676  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||| |||| |||||||||||||||||| |||||    
T  37014675 aagtctctcataaaaacatgagatttcttaagattg 37014640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 46328107 - 46328234
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  46328107 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 46328206  T
Q  148 aagtctttcatgaaaacatgagatttct 175  Q
    ||||||||||| |||| || ||||||||    
T  46328207 aagtctttcataaaaagataagatttct 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 28387523 - 28387400
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| ||  ||||||||    
T  28387523 gtggtattcaaattcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtc 28387424  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    |||||| |||| ||||||||||||    
T  28387423 tttcataaaaagatgagatttctt 28387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 48 - 154
Target Start/End: Original strand, 48524384 - 48524490
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||| ||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||    
T  48524384 gtcttgtgatattcaaaatcattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaa 48524483  T
Q  148 aagtctt 154  Q
    |||||||    
T  48524484 aagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 183
Target Start/End: Original strand, 33025578 - 33025703
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||          |||||||||||| || | ||||||||||||||||    
T  33025578 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacatcagatt----------ttgtgggattttctaataaaattttagcatgaaa 33025667  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||| |||||    
T  33025668 aagtctttcatgaaaacatgagatttcttatgattg 33025703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 38536224 - 38536106
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  38536224 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 38536135  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  38536134 aagtctttcatgaaaagatgagatttctt 38536106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 38558442 - 38558324
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  38558442 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 38558353  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  38558352 aagtctttcatgaaaagatgagatttctt 38558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  56 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 115  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 48668905 - 48668785
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||| |||||||||||||| |||||||||||||||          |||||||||||||||| | ||||| ||||||| || |||||||||    
T  48668905 gtggtattcaaaattattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattctgtagtgtaattttaacaagaaaaagtc 48668816  T
Q  153 tttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||| ||||||||| || ||||||    
T  48668815 tttcatgaaaagatgagatttgttgggattg 48668785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 29219351 - 29219469
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  29219351 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 29219440  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||| ||||||||||| ||||||||||||    
T  29219441 aagtatttcatgaaaagatgagatttctt 29219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 51085860 - 51085951
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaatttta 139  Q
    |||| |||||||||||||| |||||||||| |||||||| || |||||||  |||||||||| ||||||||| ||||| | |||||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaatttta 51085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 18798556 - 18798614
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  18798556 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 172
Target Start/End: Complemental strand, 5495231 - 5495117
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||| ||||||| ||||||| ||||||||||          |||||||||||||||||| ||||| ||||||| || ||||    
T  5495231 gtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaa 5495142  T
Q  148 aagtctttcatgaaaacatgagatt 172  Q
    ||||| || ||||||| ||||||||    
T  5495141 aagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 38319996 - 38320098
Alignment:
Q  73 aatttcgaaggattgtttaataaatcagattttgatggattttgt-gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 171  Q
    ||||| ||| ||||||||| |||||  ||||||||| |||||||| ||| |||||||||||| ||||||||  ||||||||||||||||||| |||| ||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtgaa-ttttagcacaaaaaagtctttcatgaaaatatgatat 38320094  T
Q  172 ttct 175  Q
    ||||    
T  38320095 ttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 49230951 - 49231000
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 97  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  49230951 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 31622586 - 31622536
Alignment:
Q  56 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    ||||||||||||||||||||||| || |||||||||||||||| |||||||    
T  31622586 gtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 47784451 - 47784542
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||| ||||||| ||| || |||||||||||||||          ||||||||||| |||||| |||| ||||||||||||||||    
T  47784451 gtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaat----------tggattttgtgagattttctagttaaattttagcatgaaa 47784540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 48524805 - 48524864
Alignment:
Q  146 aaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||||||||||||||||||||||| |||||||||       |||||||||||||||    
T  48524805 aaaagtctttcatgaaaacatgagatttgttaggattggttttttcttttaagattttac 48524864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 173
Target Start/End: Original strand, 45272656 - 45272765
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||          ||||||||||| |||||| ||||| ||||||| || |||||| ||    
T  45272656 gtggtattcaaaattatttaaatttcgaagga-tgtttaataaat----------tggattttgtgagattttgtagtgtaattttaacaagaaaaaatc 45272744  T
Q  153 tttcatgaaaacatgagattt 173  Q
    ||| || |||| |||||||||    
T  45272745 ttttataaaaagatgagattt 45272765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 18798615 - 18798663
Alignment:
Q  127 tagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 175  Q
    ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  18798615 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 18798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 15197 - 15011
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15197 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 15099  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||    
T  15098 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagattttac 15011  T

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Target: scaffold0365 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 15840 - 15654
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15840 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 15742  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||    
T  15741 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagattttac 15654  T

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Target: scaffold0151 (Bit Score: 126; Significance: 6e-65; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 38768 - 38583
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38768 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcagattttgatggattttgt 38671  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  38670 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 38583  T

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Target: scaffold0004 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 102138 - 102302
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  102138 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgt 102236  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||    
T  102237 gggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttcttatgattg 102302  T

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Target: scaffold0113 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 39030 - 38895
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  39030 gtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaa 38931  T
Q  148 aagtctttcatgaaaacatgagatttcttaggattg 183  Q
    ||||||||||||||||||||||||| ||||||||||    
T  38930 aagtctttcatgaaaacatgagattccttaggattg 38895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 100254 - 100415
Alignment:
Q  18 caatcaagactcttaatcacttnnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  100254 caatcaagactcttaatcacttaaaaaaa-gtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgt 100352  T
Q  118 gggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagga 180  Q
    ||| |||| ||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  100353 gggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttcttagga 100415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 671 - 540
Alignment:
Q  51 tagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaag 150  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||| | |||||||||    
T  671 tagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttggtatgaaaaag 572  T
Q  151 tctttcatgaaaacatgagatttcttaggatt 182  Q
    ||||| | ||||||||||||||||||||||||    
T  571 tctttgacgaaaacatgagatttcttaggatt 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 10637 - 10760
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||| ||||||||| ||||| ||||||| || |||||||||    
T  10637 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 10736  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    ||||||||||| ||||||||||||    
T  10737 tttcatgaaaagatgagatttctt 10760  T

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Target: scaffold0110 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 39747 - 39624
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  39747 gtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 39648  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    ||||||||||| || |||||||||    
T  39647 tttcatgaaaagataagatttctt 39624  T

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Target: scaffold0054 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 37035 - 36914
Alignment:
Q  55 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 154  Q
    |||||||||||||||| ||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 36936  T
Q  155 tcatgaaaacatgagatttctt 176  Q
    ||||||||| || |||||||||    
T  36935 tcatgaaaagataagatttctt 36914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 936 - 1063
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |  ||||    
T  936 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaat-agattttgatggattttgtgggattttgtagtgtaattttaactagaaa 1034  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    ||||||||||| |||| ||||||||||||    
T  1035 aagtctttcattaaaatatgagatttctt 1063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 58206 - 58083
Alignment:
Q  53 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtc 152  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| || || ||| ||    
T  58206 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatc 58107  T
Q  153 tttcatgaaaacatgagatttctt 176  Q
    ||||||||||| ||||||||||||    
T  58106 tttcatgaaaagatgagatttctt 58083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 14892 - 14967
Alignment:
Q  108 tggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 183  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||| |||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattg 14967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 3798 - 3712
Alignment:
Q  77 tcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaa 163  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||| ||||||||| ||||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaa 3712  T

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Target: scaffold0922 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 113
Target Start/End: Original strand, 4272 - 4337
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatt 113  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  4272 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 13954 - 14072
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||||||          ||||  ||||||  | ||||    
T  13954 gtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgt----------agtgggattttaataagaaa 14043  T
Q  148 aagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||| ||||||||||||    
T  14044 aagtctttcatgaaaagatgagatttctt 14072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 21373 - 21304
Alignment:
Q  48 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||||||    
T  21373 gtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgt 21304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 21287 - 21255
Alignment:
Q  144 gaaaaagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||||||| ||||||||||||    
T  21287 gaaaaagtctttcatgaaaagatgagatttctt 21255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 28510 - 28542
Alignment:
Q  144 gaaaaagtctttcatgaaaacatgagatttctt 176  Q
    |||||||||||||||||||| ||||||||||||    
T  28510 gaaaaagtctttcatgaaaagatgagatttctt 28542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 149
Target Start/End: Original strand, 199905 - 199998
Alignment:
Q  56 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaa 149  Q
    ||||| |||||||||||||||| ||| || ||||||||||||   |||||||| ||||||||| ||||||||||||||| ||||| || |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaaactttagtataaaaaa 199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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