View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7584_high_7 (Length: 389)
Name: NF7584_high_7
Description: NF7584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7584_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 358; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 19 - 376
Target Start/End: Original strand, 43740718 - 43741075
Alignment:
| Q |
19 |
taaagatgagaatcattcacacatgtctaaaagggctgcatgttaccaagccagtcaaagttttgattttgataaaataattaccattatgtagcaaata |
118 |
Q |
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| T |
43740718 |
taaagatgagaatcattcacacatgtctaaaagggctgcatgttaccaagccagtcaaagttttgattttgataaaataattaccattatgtagcaaata |
43740817 |
T |
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| Q |
119 |
gtaattaattaagcaaatagattcagaaagatatattcttccctacctagcttatcaagctagtaaaattctcttgggttgagagttatggtcactaatt |
218 |
Q |
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| T |
43740818 |
gtaattaattaagcaaatagattcagaaagatatattcttccctacctagcttatcaagctagtaaaattctcttgggttgagagttatggtcactaatt |
43740917 |
T |
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| Q |
219 |
aagcatttaagctagttttatgttttgtgttgtgaagcacaaaagcatgggaccaagcaccgcttatcttttaagggttgtgacactgacagtgtaatgg |
318 |
Q |
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| T |
43740918 |
aagcatttaagctagttttatgttttgtgttgtgaagcacaaaagcatgggaccaagcaccgcttatcttttaagggttgtgacactgacagtgtaatgg |
43741017 |
T |
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| Q |
319 |
agatgcttcccacttacagttctttcccctttttcatgttctttatttgtctctcttc |
376 |
Q |
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| T |
43741018 |
agatgcttcccacttacagttctttcccctttttcatgttctttatttgtctctcttc |
43741075 |
T |
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