View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7585_high_15 (Length: 223)
Name: NF7585_high_15
Description: NF7585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7585_high_15 |
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Alignment Details
Target: chr6 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 31420720 - 31420654
Alignment:
| Q |
75 |
caccactctgaaattaatcatagaaaaataacaaaaccagtttataatttaatttcatcacaatcac |
141 |
Q |
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| T |
31420720 |
caccactctgaaattaatcatagaaaaataacaaaaccagtttataatttaatttcatcacaatcac |
31420654 |
T |
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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 31420618 - 31420579
Alignment:
| Q |
169 |
taagtagaagaaatttacaagtttggttttgcttccactt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
31420618 |
taagtagaagaaatttacaagtttggttttgcttccactt |
31420579 |
T |
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