View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7585_low_8 (Length: 350)

Name: NF7585_low_8
Description: NF7585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7585_low_8
NF7585_low_8
[»] chr3 (51 HSPs)
chr3 (102-338)||(55194942-55195178)
chr3 (1-63)||(48651107-48651169)
chr3 (1-54)||(55164335-55164388)
chr3 (1-51)||(19664412-19664462)
chr3 (1-51)||(20760291-20760341)
chr3 (1-63)||(50287425-50287487)
chr3 (1-54)||(45380480-45380533)
chr3 (1-63)||(33151856-33151918)
chr3 (1-51)||(52821281-52821331)
chr3 (1-54)||(21890039-21890091)
chr3 (7-63)||(21656377-21656433)
chr3 (6-62)||(22851856-22851912)
chr3 (1-51)||(20813661-20813711)
chr3 (1-51)||(20913974-20914024)
chr3 (1-51)||(20922092-20922142)
chr3 (9-63)||(27070967-27071021)
chr3 (1-51)||(36315192-36315242)
chr3 (6-52)||(40922390-40922436)
chr3 (1-51)||(44152571-44152621)
chr3 (1-51)||(51562033-51562083)
chr3 (7-51)||(3697017-3697061)
chr3 (7-51)||(32651046-32651090)
chr3 (3-51)||(38446348-38446395)
chr3 (21-63)||(1016932-1016974)
chr3 (1-51)||(19268392-19268442)
chr3 (1-43)||(26455461-26455503)
chr3 (1-51)||(31122533-31122583)
chr3 (21-54)||(19268418-19268451)
chr3 (1-54)||(33473459-33473512)
chr3 (23-63)||(29677629-29677669)
chr3 (21-52)||(41250785-41250816)
chr3 (24-63)||(45380208-45380247)
chr3 (21-63)||(1687539-1687581)
chr3 (21-63)||(10618428-10618470)
chr3 (21-51)||(10618691-10618721)
chr3 (1-51)||(20086534-20086584)
chr3 (21-51)||(21656669-21656699)
chr3 (21-63)||(27070687-27070729)
chr3 (21-51)||(33151847-33151877)
chr3 (21-51)||(35346431-35346461)
chr3 (21-51)||(35346676-35346706)
chr3 (1-51)||(35346685-35346734)
chr3 (24-54)||(38923955-38923985)
chr3 (1-51)||(47329395-47329444)
chr3 (21-63)||(50365098-50365140)
chr3 (21-54)||(27070950-27070983)
chr3 (21-62)||(33473188-33473229)
chr3 (21-62)||(39069616-39069657)
chr3 (21-54)||(40922122-40922155)
chr3 (6-51)||(53195885-53195930)
chr3 (84-116)||(21656324-21656356)
[»] chr2 (56 HSPs)
chr2 (1-63)||(7297452-7297514)
chr2 (1-63)||(12759969-12760031)
chr2 (1-63)||(7378822-7378884)
chr2 (1-62)||(37838140-37838200)
chr2 (1-63)||(920881-920943)
chr2 (1-63)||(19180281-19180343)
chr2 (1-63)||(23673093-23673155)
chr2 (1-63)||(41178239-41178301)
chr2 (1-54)||(1106779-1106832)
chr2 (6-63)||(2455869-2455926)
chr2 (7-51)||(16246419-16246463)
chr2 (1-51)||(8899553-8899603)
chr2 (1-63)||(9276433-9276495)
chr2 (1-63)||(9331624-9331686)
chr2 (1-51)||(17484770-17484820)
chr2 (1-51)||(29737619-29737669)
chr2 (1-54)||(38750916-38750969)
chr2 (21-63)||(3358098-3358140)
chr2 (1-51)||(28650648-28650698)
chr2 (21-63)||(37732141-37732183)
chr2 (22-63)||(31187383-31187424)
chr2 (22-63)||(31195443-31195484)
chr2 (1-62)||(36444448-36444509)
chr2 (10-51)||(41500722-41500763)
chr2 (7-51)||(3358184-3358227)
chr2 (7-51)||(3430850-3430894)
chr2 (21-61)||(9276725-9276765)
chr2 (21-61)||(9331907-9331947)
chr2 (1-61)||(27328448-27328508)
chr2 (21-51)||(771936-771966)
chr2 (1-51)||(2056798-2056847)
chr2 (21-63)||(2057077-2057119)
chr2 (1-51)||(2315195-2315245)
chr2 (21-51)||(9276474-9276504)
chr2 (21-51)||(9331665-9331695)
chr2 (21-63)||(12759698-12759740)
chr2 (21-51)||(16246153-16246183)
chr2 (21-51)||(17484510-17484540)
chr2 (21-51)||(28216924-28216954)
chr2 (21-63)||(33106917-33106959)
chr2 (5-63)||(33107193-33107251)
chr2 (1-51)||(36210917-36210967)
chr2 (21-63)||(36444176-36444218)
chr2 (21-51)||(38750948-38750978)
chr2 (21-51)||(42629856-42629886)
chr2 (21-54)||(920919-920952)
chr2 (21-62)||(2094621-2094662)
chr2 (22-51)||(3430584-3430613)
chr2 (21-54)||(38751199-38751232)
chr2 (14-51)||(41500462-41500499)
chr2 (21-49)||(8899584-8899612)
chr2 (7-51)||(17134100-17134144)
chr2 (21-49)||(17134379-17134407)
chr2 (23-63)||(19180574-19180614)
chr2 (21-61)||(37838448-37838488)
chr2 (27-63)||(41177983-41178019)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-63)||(101221-101283)
[»] chr6 (30 HSPs)
chr6 (1-63)||(12613041-12613103)
chr6 (1-63)||(6503577-6503639)
chr6 (1-51)||(17942909-17942959)
chr6 (1-51)||(12626507-12626557)
chr6 (1-63)||(1915563-1915625)
chr6 (1-51)||(29050143-29050193)
chr6 (1-63)||(30378876-30378938)
chr6 (1-51)||(8178469-8178520)
chr6 (9-63)||(16193168-16193223)
chr6 (1-51)||(3259027-3259077)
chr6 (1-51)||(6785318-6785368)
chr6 (1-63)||(26393229-26393291)
chr6 (6-51)||(1077105-1077150)
chr6 (21-54)||(6785309-6785342)
chr6 (21-63)||(1915291-1915333)
chr6 (21-63)||(2707347-2707389)
chr6 (21-63)||(2707610-2707652)
chr6 (21-63)||(6503869-6503911)
chr6 (1-63)||(11133732-11133794)
chr6 (21-51)||(12626536-12626566)
chr6 (21-51)||(12626787-12626817)
chr6 (21-51)||(16193461-16193491)
chr6 (21-63)||(26393220-26393262)
chr6 (21-51)||(29050172-29050202)
chr6 (21-51)||(29050423-29050453)
chr6 (21-51)||(30379168-30379198)
chr6 (21-63)||(35224131-35224173)
chr6 (21-62)||(8178198-8178239)
chr6 (21-62)||(31376068-31376109)
chr6 (21-53)||(16193208-16193240)
[»] chr1 (70 HSPs)
chr1 (1-63)||(25800502-25800564)
chr1 (1-61)||(23767634-23767694)
chr1 (1-51)||(50099091-50099141)
chr1 (1-62)||(37216756-37216817)
chr1 (1-61)||(5400732-5400792)
chr1 (1-61)||(49094931-49094991)
chr1 (1-52)||(8141706-8141757)
chr1 (1-51)||(12964517-12964567)
chr1 (1-51)||(18782309-18782359)
chr1 (1-63)||(19274418-19274480)
chr1 (1-51)||(38473846-38473896)
chr1 (6-52)||(48802548-48802594)
chr1 (1-51)||(49973813-49973863)
chr1 (1-62)||(26069752-26069813)
chr1 (1-61)||(7608986-7609046)
chr1 (7-63)||(41105875-41105931)
chr1 (1-63)||(45350934-45350997)
chr1 (1-51)||(24204691-24204740)
chr1 (1-51)||(32373773-32373822)
chr1 (1-51)||(50533254-50533304)
chr1 (1-62)||(18917385-18917445)
chr1 (1-61)||(25988491-25988552)
chr1 (6-62)||(17989992-17990048)
chr1 (7-51)||(49814171-49814215)
chr1 (21-63)||(7651813-7651855)
chr1 (21-63)||(9878995-9879037)
chr1 (21-63)||(16508139-16508181)
chr1 (21-63)||(21965216-21965258)
chr1 (21-63)||(22351073-22351115)
chr1 (1-51)||(23228414-23228464)
chr1 (21-63)||(28425311-28425353)
chr1 (21-63)||(52350135-52350177)
chr1 (21-54)||(17984078-17984111)
chr1 (1-62)||(19315500-19315561)
chr1 (1-54)||(41982456-41982509)
chr1 (1-62)||(46095295-46095356)
chr1 (21-62)||(48802280-48802321)
chr1 (7-51)||(9974713-9974757)
chr1 (7-51)||(52067880-52067924)
chr1 (21-60)||(25800792-25800831)
chr1 (21-51)||(8141697-8141727)
chr1 (21-55)||(9974738-9974772)
chr1 (21-51)||(12142965-12142995)
chr1 (21-51)||(19315791-19315821)
chr1 (21-51)||(24036661-24036691)
chr1 (21-51)||(24204431-24204461)
chr1 (24-62)||(28425577-28425615)
chr1 (1-51)||(36157898-36157947)
chr1 (21-51)||(36781383-36781413)
chr1 (21-51)||(38473837-38473867)
chr1 (21-63)||(40721494-40721536)
chr1 (21-51)||(44978728-44978758)
chr1 (21-51)||(44979399-44979429)
chr1 (21-51)||(46051601-46051631)
chr1 (21-63)||(50690094-50690136)
chr1 (1-63)||(52350144-52350206)
chr1 (21-54)||(7552973-7553006)
chr1 (21-62)||(18892218-18892259)
chr1 (21-50)||(19274710-19274739)
chr1 (8-61)||(26549249-26549302)
chr1 (21-62)||(43396826-43396867)
chr1 (21-62)||(45350666-45350707)
chr1 (7-63)||(7553242-7553298)
chr1 (21-49)||(16505199-16505227)
chr1 (7-51)||(21929392-21929436)
chr1 (21-53)||(23228152-23228184)
chr1 (21-53)||(25988482-25988514)
chr1 (21-61)||(26549539-26549579)
chr1 (1-61)||(33673878-33673938)
chr1 (25-53)||(45350929-45350957)
[»] chr8 (43 HSPs)
chr8 (1-54)||(38633924-38633977)
chr8 (1-51)||(4649021-4649071)
chr8 (1-62)||(9056586-9056647)
chr8 (1-53)||(43806753-43806805)
chr8 (1-63)||(513167-513229)
chr8 (1-51)||(9884727-9884777)
chr8 (1-51)||(39295371-39295421)
chr8 (21-62)||(41536476-41536517)
chr8 (7-51)||(39513565-39513609)
chr8 (1-51)||(15847009-15847060)
chr8 (1-51)||(35443181-35443232)
chr8 (21-63)||(259866-259908)
chr8 (21-63)||(656013-656055)
chr8 (21-63)||(841748-841790)
chr8 (9-51)||(1293357-1293399)
chr8 (21-63)||(8137061-8137103)
chr8 (21-63)||(12010437-12010479)
chr8 (21-63)||(22683936-22683978)
chr8 (21-63)||(22684199-22684241)
chr8 (1-51)||(24193503-24193553)
chr8 (21-63)||(36400018-36400060)
chr8 (21-63)||(37933530-37933572)
chr8 (1-51)||(42988446-42988496)
chr8 (6-63)||(2533131-2533188)
chr8 (5-62)||(33651701-33651758)
chr8 (21-53)||(35443209-35443241)
chr8 (24-63)||(3876062-3876101)
chr8 (1-63)||(440699-440761)
chr8 (21-51)||(440991-441021)
chr8 (1-55)||(9056558-9056611)
chr8 (21-51)||(24430782-24430812)
chr8 (1-51)||(28707666-28707715)
chr8 (21-63)||(29485175-29485217)
chr8 (24-54)||(33651995-33652025)
chr8 (21-51)||(35443462-35443492)
chr8 (21-63)||(37933793-37933835)
chr8 (1-59)||(38106963-38107021)
chr8 (24-54)||(38106997-38107027)
chr8 (1-62)||(41536747-41536808)
chr8 (24-52)||(2533426-2533454)
chr8 (21-61)||(6016336-6016376)
chr8 (24-52)||(9056552-9056580)
chr8 (7-51)||(27428448-27428492)
[»] chr7 (58 HSPs)
chr7 (1-63)||(44544268-44544330)
chr7 (1-54)||(31793839-31793892)
chr7 (1-51)||(35600342-35600392)
chr7 (1-63)||(48628664-48628726)
chr7 (6-63)||(39241836-39241893)
chr7 (1-62)||(42979558-42979619)
chr7 (1-51)||(2960805-2960855)
chr7 (1-51)||(11050481-11050531)
chr7 (1-51)||(37394218-37394267)
chr7 (1-51)||(44800630-44800680)
chr7 (1-51)||(45723711-45723761)
chr7 (1-51)||(47219016-47219066)
chr7 (1-51)||(47271852-47271902)
chr7 (7-54)||(8162938-8162985)
chr7 (1-51)||(221167-221217)
chr7 (1-51)||(7335931-7335981)
chr7 (1-51)||(11476776-11476826)
chr7 (1-51)||(18353015-18353065)
chr7 (21-63)||(23842456-23842498)
chr7 (1-51)||(27364559-27364609)
chr7 (1-51)||(29739572-29739622)
chr7 (1-51)||(38427782-38427832)
chr7 (1-62)||(39033921-39033983)
chr7 (21-63)||(47294239-47294281)
chr7 (1-49)||(4923089-4923137)
chr7 (27-63)||(30972158-30972194)
chr7 (7-62)||(41139638-41139693)
chr7 (24-63)||(42888763-42888802)
chr7 (24-63)||(47120147-47120186)
chr7 (24-63)||(47294505-47294544)
chr7 (21-51)||(1469704-1469734)
chr7 (1-63)||(1469713-1469775)
chr7 (21-51)||(11050221-11050251)
chr7 (21-51)||(11476516-11476546)
chr7 (21-51)||(11476767-11476797)
chr7 (21-51)||(30798328-30798358)
chr7 (1-51)||(30798588-30798638)
chr7 (21-51)||(30876410-30876440)
chr7 (21-51)||(31684094-31684124)
chr7 (21-51)||(31684345-31684375)
chr7 (21-51)||(31793830-31793860)
chr7 (21-51)||(37393958-37393988)
chr7 (24-62)||(38427512-38427550)
chr7 (21-63)||(40851171-40851213)
chr7 (21-51)||(41139369-41139399)
chr7 (21-51)||(43752736-43752766)
chr7 (21-51)||(43968470-43968500)
chr7 (1-63)||(43968479-43968541)
chr7 (21-63)||(44544560-44544602)
chr7 (21-51)||(47119891-47119921)
chr7 (21-51)||(47219045-47219075)
chr7 (24-62)||(47219299-47219337)
chr7 (1-51)||(47281346-47281396)
chr7 (21-63)||(48628956-48628998)
chr7 (21-54)||(30798579-30798612)
chr7 (21-62)||(33884214-33884255)
chr7 (21-54)||(35600333-35600366)
chr7 (21-62)||(45233669-45233710)
[»] chr5 (58 HSPs)
chr5 (1-51)||(6600356-6600406)
chr5 (1-51)||(11692367-11692417)
chr5 (1-63)||(16096179-16096241)
chr5 (1-51)||(31710153-31710203)
chr5 (1-63)||(41282201-41282263)
chr5 (1-63)||(43166480-43166542)
chr5 (1-63)||(4016093-4016155)
chr5 (1-63)||(6331236-6331298)
chr5 (1-51)||(6740175-6740225)
chr5 (1-51)||(8689443-8689493)
chr5 (1-51)||(20408404-20408454)
chr5 (1-51)||(26593500-26593550)
chr5 (6-51)||(3352226-3352271)
chr5 (6-51)||(17002381-17002426)
chr5 (1-62)||(20517018-20517079)
chr5 (1-61)||(6251854-6251914)
chr5 (7-51)||(20079483-20079527)
chr5 (4-51)||(27509849-27509896)
chr5 (1-51)||(19661851-19661901)
chr5 (1-63)||(28078625-28078687)
chr5 (1-51)||(30297969-30298019)
chr5 (1-63)||(33760690-33760752)
chr5 (1-51)||(39824427-39824477)
chr5 (1-51)||(42993389-42993439)
chr5 (5-61)||(567732-567788)
chr5 (1-53)||(37923618-37923670)
chr5 (1-63)||(1052395-1052457)
chr5 (1-51)||(11000948-11000998)
chr5 (6-51)||(27116318-27116364)
chr5 (1-51)||(40074821-40074871)
chr5 (21-63)||(43166217-43166259)
chr5 (21-54)||(39002205-39002238)
chr5 (24-63)||(26035560-26035599)
chr5 (6-53)||(35342049-35342096)
chr5 (24-62)||(4015823-4015861)
chr5 (21-51)||(6251893-6251923)
chr5 (21-63)||(6252123-6252165)
chr5 (21-51)||(6331277-6331307)
chr5 (21-51)||(6600096-6600126)
chr5 (21-63)||(11935596-11935638)
chr5 (1-51)||(14717476-14717526)
chr5 (21-51)||(14952224-14952254)
chr5 (21-51)||(20408433-20408463)
chr5 (21-51)||(20408684-20408714)
chr5 (5-51)||(23129137-23129183)
chr5 (1-51)||(27457385-27457434)
chr5 (21-51)||(28078365-28078395)
chr5 (1-51)||(30208617-30208667)
chr5 (21-51)||(30297960-30297990)
chr5 (21-51)||(33760681-33760711)
chr5 (5-51)||(39125996-39126042)
chr5 (21-51)||(39824456-39824486)
chr5 (21-51)||(41282242-41282272)
chr5 (21-54)||(27116056-27116089)
chr5 (22-51)||(33760430-33760459)
chr5 (7-63)||(8215759-8215815)
chr5 (21-53)||(30297707-30297739)
chr5 (27-63)||(38964330-38964366)
[»] chr4 (50 HSPs)
chr4 (1-63)||(12196337-12196399)
chr4 (1-63)||(19496365-19496427)
chr4 (1-63)||(31208607-31208669)
chr4 (1-51)||(32118585-32118635)
chr4 (1-62)||(25730100-25730161)
chr4 (1-62)||(44490070-44490131)
chr4 (1-51)||(8882233-8882283)
chr4 (1-51)||(28812506-28812556)
chr4 (1-51)||(48149370-48149420)
chr4 (6-51)||(22298390-22298435)
chr4 (6-63)||(37381705-37381762)
chr4 (7-51)||(17847321-17847365)
chr4 (7-62)||(33808006-33808061)
chr4 (1-51)||(17847344-17847394)
chr4 (1-51)||(20534325-20534375)
chr4 (1-51)||(23552933-23552983)
chr4 (1-51)||(42273671-42273721)
chr4 (6-63)||(31590936-31590993)
chr4 (21-63)||(17993228-17993270)
chr4 (1-63)||(25734443-25734505)
chr4 (21-63)||(26017311-26017353)
chr4 (21-63)||(28264794-28264836)
chr4 (1-51)||(31617655-31617705)
chr4 (1-51)||(35929911-35929961)
chr4 (1-51)||(39995387-39995437)
chr4 (21-63)||(44490470-44490512)
chr4 (21-63)||(49118762-49118804)
chr4 (6-51)||(33693559-33693604)
chr4 (21-62)||(48707944-48707985)
chr4 (21-51)||(8881973-8882003)
chr4 (1-51)||(10588452-10588501)
chr4 (21-51)||(11795114-11795144)
chr4 (1-51)||(11795374-11795424)
chr4 (21-63)||(12196620-12196662)
chr4 (1-47)||(15984885-15984931)
chr4 (21-51)||(15984910-15984940)
chr4 (21-51)||(15985161-15985191)
chr4 (1-63)||(17993237-17993299)
chr4 (21-63)||(25730391-25730433)
chr4 (1-35)||(28160173-28160207)
chr4 (21-51)||(28264543-28264573)
chr4 (21-63)||(28812235-28812277)
chr4 (21-63)||(30467218-30467260)
chr4 (21-63)||(31973742-31973784)
chr4 (21-63)||(33173968-33174010)
chr4 (21-51)||(42273700-42273730)
chr4 (21-51)||(48149650-48149680)
chr4 (21-62)||(49118500-49118541)
chr4 (9-61)||(1425308-1425360)
chr4 (21-49)||(50276100-50276128)
[»] scaffold0727 (1 HSPs)
scaffold0727 (1-51)||(5054-5104)
[»] scaffold0693 (1 HSPs)
scaffold0693 (1-63)||(5247-5309)
[»] scaffold1562 (1 HSPs)
scaffold1562 (5-47)||(703-745)
[»] scaffold1158 (1 HSPs)
scaffold1158 (5-47)||(1848-1890)
[»] scaffold0717 (1 HSPs)
scaffold0717 (1-51)||(1977-2027)
[»] scaffold0338 (1 HSPs)
scaffold0338 (21-63)||(5751-5793)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-51)||(11236-11286)
[»] scaffold0004 (1 HSPs)
scaffold0004 (21-54)||(219037-219070)
[»] scaffold0542 (1 HSPs)
scaffold0542 (21-51)||(2184-2214)
[»] scaffold0184 (2 HSPs)
scaffold0184 (1-51)||(12966-13016)
scaffold0184 (21-54)||(12992-13025)
[»] scaffold0117 (1 HSPs)
scaffold0117 (21-51)||(14549-14579)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-51)||(47833-47883)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-51)||(59828-59878)
scaffold0078 (21-54)||(59819-59852)
[»] scaffold1986 (1 HSPs)
scaffold1986 (14-51)||(14-51)


Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 102 - 338
Target Start/End: Original strand, 55194942 - 55195178
Alignment:
Q  102 accaaatatatattaacaacgtcatttgtttaagaacaccagcgacaaccatggtgcgtggcagtcaggattgagttttgtaccaccatccaaaacgtgt 201  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55194942 accaaatatatattaacgacatcatttgtttaagaacaccagcgacaaccatggtgcgtggcagtcaggattgagttttgtaccaccatccaaaacgtgt 55195041  T
Q  202 tttacaaacgttcaccaacatggcaacatgattatcagtaagactcagctatttcatgtttcagcaacggtaaaatcctcacgtttagtttattttgggt 301  Q
    ||||||||||||||||||| |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55195042 tttacaaacgttcaccaacgtggcaacatgattatcagcaagtctcggctatttcatgtttcagcaacggtaaaatcctcacgtttagtttattttgggt 55195141  T
Q  302 gacgcggaatatgtaatacatgtgttatgatattatt 338  Q
    ||||||||||||| |||||||||||||||||||||||    
T  55195142 gacgcggaatatgcaatacatgtgttatgatattatt 55195178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 48651169 - 48651107
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  48651169 tttgggacttttgaaacttgaaggacttgtttgggacttttgaaacttaaatgatcactttgg 48651107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 55164335 - 55164388
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55164335 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaaga 55164388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19664462 - 19664412
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19664462 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 19664412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20760291 - 20760341
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20760291 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 20760341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 50287487 - 50287425
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||    
T  50287487 tttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacgactttgg 50287425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45380480 - 45380533
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  45380480 tttgagacttttgaaacttaaagtacttgtttgggacttttgaaacttaaaaga 45380533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33151856 - 33151918
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||    
T  33151856 tttgggacttttgaaacttaaaggacttgtttgagacttttgaaacttaaaggacgactttgg 33151918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 52821281 - 52821331
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  52821281 tttgagacttttgaaacttaaatgacttgtttgggacttttgaaacttaaa 52821331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21890091 - 21890039
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  21890091 tttgagacttttgaaacttaaaggact-gtttgggacttttgaaacttaaaaga 21890039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 21656433 - 21656377
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||  |||||||    
T  21656433 acttttgaaacttaaatgacttgtttgggacttttgaaacttaaaagaccactttgg 21656377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 22851912 - 22851856
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||| || |||||||    
T  22851912 gacttttaaaacttaaaggacttgtttgggacttttgaaacttaaaggacgactttg 22851856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20813661 - 20813711
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| || || |||||||||||||||||||||||||    
T  20813661 tttgagacttttgaaacttaaaagatttgtttgggacttttgaaacttaaa 20813711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20913974 - 20914024
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||||||||    
T  20913974 tttgggacttttgaaacttaaaggacttgtttgggagttttgaaacttaaa 20914024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20922092 - 20922142
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||||||||    
T  20922092 tttgggacttttgaaacttaaaggacttgtttgggagttttgaaacttaaa 20922142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 27070967 - 27071021
Alignment:
Q  9 ttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||| || |||||||||||||||||||||||||||| || ||||||||    
T  27070967 ttttgaaacttaaaagacttgtttgggacttttgaaacttaaaggacgactttgg 27071021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36315192 - 36315242
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  36315192 tttgggacttttgaaacttaaatgacttgtttgggacttttgaaacttaaa 36315242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 40922390 - 40922436
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaa 52  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||    
T  40922390 gacttttgaaacttaaaggacttgtttggtacttttgaaacttaaaa 40922436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44152621 - 44152571
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  44152621 tttgagacttttgaaacttaaagaacttgtttggaacttttgaaacttaaa 44152571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 51562083 - 51562033
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  51562083 tttgagacttttgaaacttaaaagacttgtttgagacttttgaaacttaaa 51562033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 3697061 - 3697017
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  3697061 acttttgaaacttaaagaacttgtttgggacttttgaaacttaaa 3697017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 32651046 - 32651090
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||    
T  32651046 acttttgaaacttaaaggacttgtttgagacttttgaaacttaaa 32651090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 38446395 - 38446348
Alignment:
Q  3 tgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  38446395 tgagacttttgaaacttaaag-acttgtttgggacttttgaaacttaaa 38446348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 1016974 - 1016932
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  1016974 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 1016932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19268442 - 19268392
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || |||||||||| |||||||||||||||||    
T  19268442 tttgggacttttgaaacttaaaagacttgtttgagacttttgaaacttaaa 19268392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26455503 - 26455461
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttga 43  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  26455503 tttgagacttttgaaatttaaaggacttgtttgggacttttga 26455461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31122583 - 31122533
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || |||||||||| |||||||||||||||||    
T  31122583 tttgggacttttgaaacttaaatgacttgtttgagacttttgaaacttaaa 31122533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 19268451 - 19268418
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||||||||||||||||||||||||    
T  19268451 aaggacttgtttgggacttttgaaacttaaaaga 19268418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33473459 - 33473512
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaaga 54  Q
    |||| |||||||||||||| || ||||||||||| ||||||||||| |||||||    
T  33473459 tttgggacttttgaaacttaaatgacttgtttggaacttttgaaacctaaaaga 33473512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 29677629 - 29677669
Alignment:
Q  23 ggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||| || ||||||||    
T  29677629 ggacttgtttgggacttttgaaacttaaaggacgactttgg 29677669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 52
Target Start/End: Complemental strand, 41250816 - 41250785
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaa 52  Q
    ||||||||||||||||||||||||||||||||    
T  41250816 aaggacttgtttgggacttttgaaacttaaaa 41250785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 45380247 - 45380208
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  45380247 gacttgtttgggacttttgaaacttaaaggatcactttgg 45380208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 1687581 - 1687539
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||| ||||||||||||||||||||||||| || ||||||||    
T  1687581 aaggatttgtttgggacttttgaaacttaaatgacgactttgg 1687539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 10618470 - 10618428
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||| ||||||||||||| |||||||| |||||||    
T  10618470 aaggacttgtttaggacttttgaaacataaaagatcactttgg 10618428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 10618691 - 10618721
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  10618691 aaggacttgtttgggacttttgaaacttaaa 10618721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20086534 - 20086584
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||  |||||||||| ||| ||||||||||||||||    
T  20086534 tttgggacttttgaaactcaaaggacttgtctggaacttttgaaacttaaa 20086584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 21656669 - 21656699
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  21656669 aaggacttgtttgggacttttgaaacttaaa 21656699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 27070729 - 27070687
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  27070729 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 27070687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 33151847 - 33151877
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  33151847 aaggacttgtttgggacttttgaaacttaaa 33151877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 35346461 - 35346431
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  35346461 aaggacttgtttgggacttttgaaacttaaa 35346431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 35346676 - 35346706
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  35346676 aaggacttgtttgggacttttgaaacttaaa 35346706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35346685 - 35346734
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| ||||||||||||| ||||||| |||||||||    
T  35346685 tttgggacttttgaaacttaaaggacttgtttgagactttt-aaacttaaa 35346734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 54
Target Start/End: Complemental strand, 38923985 - 38923955
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaaga 54  Q
    |||||||||||||||||||||||||||||||    
T  38923985 gacttgtttgggacttttgaaacttaaaaga 38923955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 47329395 - 47329444
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| ||||||||||| || ||| |||||||||||||||||||||||||||    
T  47329395 tttgggacttttgaaatttaaag-acttgtttgggacttttgaaacttaaa 47329444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 50365098 - 50365140
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||    
T  50365098 aaggacttgtttgagacttttgaaacttaaaggatcactttgg 50365140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 27070950 - 27070983
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    |||||||||||||||| |||||||||||||||||    
T  27070950 aaggacttgtttgggatttttgaaacttaaaaga 27070983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 33473229 - 33473188
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||| || |||||||||||||||||| ||||||    
T  33473229 aaggacttgtttgagatttttgaaacttaaaagatcactttg 33473188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 39069657 - 39069616
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  39069657 aaggacttgtttgagacttttgaaacttaaaggacgactttg 39069616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 40922155 - 40922122
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||| ||||||||||||||||||||    
T  40922155 aaggacttgtttgagacttttgaaacttaaaaga 40922122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 53195930 - 53195885
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||| || || |||||| ||||||||||||||||||    
T  53195930 gacttttgaaacttaaatgatttgtttcggacttttgaaacttaaa 53195885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 21656356 - 21656324
Alignment:
Q  84 gacctttagatgcatttgaccaaatatatatta 116  Q
    ||||||||||||||||||||||| |||||||||    
T  21656356 gacctttagatgcatttgaccaattatatatta 21656324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 7297452 - 7297514
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  7297452 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaagacgactttgg 7297514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12759969 - 12760031
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  12759969 tttgagactgttgaaacttaaaggacttgtttgggacttttgaaacttaaaagacgactttgg 12760031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7378884 - 7378822
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||    
T  7378884 tttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaagactactttgg 7378822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37838200 - 37838140
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  37838200 tttgggacttttgaaactt-aaggacttgtttgggacttttgaaacttaaaggatgactttg 37838140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 920943 - 920881
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||| || ||||||||    
T  920943 tttgagacttttgaaacttaaaagacttgtttgggacgtttgaaacttaaaggacgactttgg 920881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19180343 - 19180281
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||    
T  19180343 tttgggacttttgaaacttaaaggacttgtttgagacttttgaaacttaaaggacgactttgg 19180281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 23673093 - 23673155
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| |||||||||||||| | |||||||||||||| || ||||||||    
T  23673093 tttgagacttttgaaacttaaaggacttgtttggaatttttgaaacttaaaggacgactttgg 23673155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41178239 - 41178301
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||||| || ||||||||    
T  41178239 tttgagacttttgaaacttaaatggcttgtttgggacttttgaaacttaaaggacgactttgg 41178301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1106779 - 1106832
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaaga 54  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||||||||    
T  1106779 tttgggacttttgaaacttaaatgacttgtttgggacttttgaaacttaaaaga 1106832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 2455926 - 2455869
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||    
T  2455926 gacttttgaaacttaaaggacttgtttgcgacttttgaaacttaaaggacgactttgg 2455869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 16246419 - 16246463
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  16246419 acttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 16246463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8899603 - 8899553
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  8899603 tttgggacttttgaaacttataggacttgtttgggacttttgaaacttaaa 8899553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9276495 - 9276433
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||||| ||| ||||||||||||||||| || ||||||||    
T  9276495 tttgggacttttgaaacttaaaggacttgcttgagacttttgaaacttaaaggacgactttgg 9276433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9331686 - 9331624
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||||| ||| ||||||||||||||||| || ||||||||    
T  9331686 tttgggacttttgaaacttaaaggacttgcttgagacttttgaaacttaaaggacgactttgg 9331624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17484770 - 17484820
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  17484770 tttgagacttttgaaacttaaaggatttgtttgggacttttgaaatttaaa 17484820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29737669 - 29737619
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||| || ||||||||||||| |||||||||||||||||    
T  29737669 tttgagacttttgaaatttaaaggacttgtttgagacttttgaaacttaaa 29737619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38750969 - 38750916
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaaga 54  Q
    |||| |||||||||||||| || |||||||||| ||||||||||||||||||||    
T  38750969 tttgggacttttgaaacttaaatgacttgtttgagacttttgaaacttaaaaga 38750916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 3358140 - 3358098
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  3358140 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 3358098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28650648 - 28650698
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| ||| |||||||||| ||||||||||||||||    
T  28650648 tttgggacttttgaaacttaaagaacttgtttggaacttttgaaacttaaa 28650698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 37732183 - 37732141
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  37732183 aaggacttgtttgagacttttgaaacttaaaagacgactttgg 37732141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 31187383 - 31187424
Alignment:
Q  22 aggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  31187383 aggacttgtttgggacttttgaaacttaaaagaccactttgg 31187424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 31195443 - 31195484
Alignment:
Q  22 aggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  31195443 aggacttgtttgggacttttgaaacttaaaagaccactttgg 31195484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36444448 - 36444509
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    |||| |||||||||||||  || |||||||||| ||||||||||||||||| || |||||||    
T  36444448 tttgtgacttttgaaactgaaaagacttgtttgagacttttgaaacttaaaggacgactttg 36444509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 41500722 - 41500763
Alignment:
Q  10 tttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||| || ||||||||||||||||||||||||||||    
T  41500722 tttgaaacttaaatgacttgtttgggacttttgaaacttaaa 41500763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 3358184 - 3358227
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  3358184 acttttgaaacttaaag-acttgtttgggacttttgaaacttaaa 3358227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 3430850 - 3430894
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||    
T  3430850 acttttgaaacttaaaggatttgtttgagacttttgaaacttaaa 3430894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 9276725 - 9276765
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  9276725 aaggacttgtttgggacttttgaaacttaaaggacgacttt 9276765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 9331907 - 9331947
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  9331907 aaggacttgtttgggacttttgaaacttaaaggacgacttt 9331947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27328508 - 27328448
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||||||||||||| ||||||   |||||||||||||||| ||||| || ||||||    
T  27328508 tttgagacttttgaaacttaaaggaccactttgggacttttgaaatttaaaggacgacttt 27328448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 771966 - 771936
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  771966 aaggacttgtttgggacttttgaaacttaaa 771936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2056847 - 2056798
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||| | ||||||||||| |||||||||||||    
T  2056847 tttgagacttttgaaacttaaag-atttgtttgggacatttgaaacttaaa 2056798  T

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Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 2057077 - 2057119
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||| |||||||||||||||||||||||  |||||||    
T  2057077 aaggacttgtctgggacttttgaaacttaaaagaccactttgg 2057119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2315195 - 2315245
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| ||||||   ||||||||||||||||||||||    
T  2315195 tttgggacttttgaaacttaaaggaccattttgggacttttgaaacttaaa 2315245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 9276504 - 9276474
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  9276504 aaggacttgtttgggacttttgaaacttaaa 9276474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 9331695 - 9331665
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  9331695 aaggacttgtttgggacttttgaaacttaaa 9331665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 12759740 - 12759698
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  12759740 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 12759698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 16246183 - 16246153
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  16246183 aaggacttgtttgggacttttgaaacttaaa 16246153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 17484540 - 17484510
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  17484540 aaggacttgtttgggacttttgaaacttaaa 17484510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 28216954 - 28216924
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  28216954 aaggacttgtttgggacttttgaaacttaaa 28216924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 33106959 - 33106917
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  33106959 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 33106917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 33107193 - 33107251
Alignment:
Q  5 agacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||| ||||||   ||||| |||||||||||||||| || ||||||||    
T  33107193 agacttttgaaacttaaaggacaactttggaacttttgaaacttaaaggacgactttgg 33107251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36210967 - 36210917
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || || ||||||| |||||||||||||||||    
T  36210967 tttgtgacttttgaaacttaaatgatttgtttgagacttttgaaacttaaa 36210917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 36444218 - 36444176
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  36444218 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 36444176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 38750978 - 38750948
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  38750978 aaggacttgtttgggacttttgaaacttaaa 38750948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 42629886 - 42629856
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  42629886 aaggacttgtttgggacttttgaaacttaaa 42629856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 920952 - 920919
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||| ||||||||||||||||||||    
T  920952 aaggacttgtttgagacttttgaaacttaaaaga 920919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 2094621 - 2094662
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||| ||||||| |||||||||||| |||||||    
T  2094621 aaggacttgtttgagacttttcaaacttaaaagacgactttg 2094662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 51
Target Start/End: Complemental strand, 3430613 - 3430584
Alignment:
Q  22 aggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||||||||||||||    
T  3430613 aggacttgtttgggacttttgaaacttaaa 3430584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 38751199 - 38751232
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    |||||||||||| |||||||||||||||||||||    
T  38751199 aaggacttgtttaggacttttgaaacttaaaaga 38751232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 41500499 - 41500462
Alignment:
Q  14 aaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  41500499 aaactagaaggacttgtttgagacttttgaaacttaaa 41500462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 49
Target Start/End: Complemental strand, 8899612 - 8899584
Alignment:
Q  21 aaggacttgtttgggacttttgaaactta 49  Q
    |||||||||||||||||||||||||||||    
T  8899612 aaggacttgtttgggacttttgaaactta 8899584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 17134144 - 17134100
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||| ||||| |||||||| |||||| |||||||||    
T  17134144 acttttgaaacttaaaggatttgtttggaacttttaaaacttaaa 17134100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 49
Target Start/End: Original strand, 17134379 - 17134407
Alignment:
Q  21 aaggacttgtttgggacttttgaaactta 49  Q
    |||||||||||||||||||||||||||||    
T  17134379 aaggacttgtttgggacttttgaaactta 17134407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 19180574 - 19180614
Alignment:
Q  23 ggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||| |||||||||||||||| || ||||||||    
T  19180574 ggacttgtttggaacttttgaaacttaaaggacgactttgg 19180614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 37838448 - 37838488
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||||||| ||||||||||||||||| || ||||||    
T  37838448 aaggacttgtttgagacttttgaaacttaaaggacgacttt 37838488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 41178019 - 41177983
Alignment:
Q  27 ttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||| || ||||||||    
T  41178019 ttgtttgggacttttgaaacttaaaggacgactttgg 41177983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 101221 - 101283
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||    
T  101221 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacgactttgg 101283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12613041 - 12613103
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  12613041 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggatcactttgg 12613103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6503639 - 6503577
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||    
T  6503639 tttgaaacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacgactttgg 6503577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17942959 - 17942909
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17942959 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 17942909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12626557 - 12626507
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  12626557 tttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 12626507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1915563 - 1915625
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||| ||||||| |||||||||||||| |||||||||||||||| || ||||||||    
T  1915563 tttgggactttggaaacttaaaggacttgtttggaacttttgaaacttaaaggacgactttgg 1915625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29050193 - 29050143
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||||||||    
T  29050193 tttgggacttttgaaacttaaaggacttttttgggacttttgaaacttaaa 29050143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30378938 - 30378876
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||| ||||||||| ||| ||||||||||||||||||||||||||||||  |||||||    
T  30378938 tttgggactgttgaaacttaaagaacttgtttgggacttttgaaacttaaaagaccactttgg 30378876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8178469 - 8178520
Alignment:
Q  1 tttgagacttttgaaacttgaa-ggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  8178469 tttgagatttttgaaacttaaaaggacttgtttgggacttttgaaacttaaa 8178520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 16193223 - 16193168
Alignment:
Q  9 ttttgaaacttgaa-ggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||| || ||||||||||||||||||||||||||||| ||| |||||||    
T  16193223 ttttgaaacttaaaaggacttgtttgggacttttgaaacttaaaggatcactttgg 16193168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3259027 - 3259077
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||||||||    
T  3259027 tttgagacttttgaaacttaaagtatttgtttgagacttttgaaacttaaa 3259077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6785318 - 6785368
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || |||||||||| |||||||||||||||||    
T  6785318 tttgggacttttgaaacttaaaagacttgtttgagacttttgaaacttaaa 6785368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 26393229 - 26393291
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| |||||    |||||||||||||||||||||| || ||||||||    
T  26393229 tttgagacttttgaaacttaaaggatcactttgggacttttgaaacttaaaggacgactttgg 26393291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 1077150 - 1077105
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||| ||| || |||||||||||||||||||||||||||||||    
T  1077150 gactttttaaatttaaaggacttgtttgggacttttgaaacttaaa 1077105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 6785309 - 6785342
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||||||||||||||||||||||||    
T  6785309 aaggacttgtttgggacttttgaaacttaaaaga 6785342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 1915333 - 1915291
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||| |||||||||| || ||||||||    
T  1915333 aaggacttgtttgggactttggaaacttaaaggacgactttgg 1915291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 2707389 - 2707347
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||||| |||||||| || ||||||||    
T  2707389 aaggacttgtttgggacttttggaacttaaaggacgactttgg 2707347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 2707610 - 2707652
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  2707610 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 2707652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 6503869 - 6503911
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  6503869 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 6503911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 11133794 - 11133732
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| ||||||||||||||  |||||   ||| |||||||||||||||||| |||||||||||    
T  11133794 tttgggacttttgaaacttacaggaccactttaggacttttgaaacttaaaggatgactttgg 11133732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 12626566 - 12626536
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  12626566 aaggacttgtttgggacttttgaaacttaaa 12626536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 12626787 - 12626817
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  12626787 aaggacttgtttgggacttttgaaacttaaa 12626817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 16193461 - 16193491
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  16193461 aaggacttgtttgggacttttgaaacttaaa 16193491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 26393220 - 26393262
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||    
T  26393220 aaggacttgtttgagacttttgaaacttaaaggatcactttgg 26393262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 29050202 - 29050172
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  29050202 aaggacttgtttgggacttttgaaacttaaa 29050172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 29050423 - 29050453
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  29050423 aaggacttgtttgggacttttgaaacttaaa 29050453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 30379168 - 30379198
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  30379168 aaggacttgtttgggacttttgaaacttaaa 30379198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 35224131 - 35224173
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  35224131 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 35224173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 8178239 - 8178198
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||||||||||| ||||||||| || |||||||    
T  8178239 aaggacttgtttgggacttttaaaacttaaaggacgactttg 8178198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 31376068 - 31376109
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  31376068 aaggacttgtttgagacttttgaaacttaaaggatcactttg 31376109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 16193240 - 16193208
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaag 53  Q
    |||||||||||||||| ||||||||||||||||    
T  16193240 aaggacttgtttgggaattttgaaacttaaaag 16193208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25800564 - 25800502
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  25800564 tttgagacttttgaaacttaaaggacttgtttgagacttttgaaacttaaaagacgactttgg 25800502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23767634 - 23767694
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||    
T  23767634 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacgacttt 23767694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 50099141 - 50099091
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  50099141 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 50099091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37216817 - 37216756
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||| || |||||||    
T  37216817 tttgagacttttgaaacttaaagaacttgtttgggacttttgaaacttaaaggacgactttg 37216756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5400792 - 5400732
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||    
T  5400792 tttgagacttttgaaacttaaaggatttgtttgggacttttgaaacttaaaggatcacttt 5400732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 49094931 - 49094991
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  49094931 tttgagacttttgaaacttaaaagacttgtttgagacttttgaaacttaaaagatcacttt 49094991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8141706 - 8141757
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaa 52  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  8141706 tttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaa 8141757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12964567 - 12964517
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  12964567 tttgagacttttgaaacttaaaggacttgtttgagacttttgaaacttaaa 12964517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18782309 - 18782359
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  18782309 tttgagacttttgaaacttaaagggcttgtttgggacttttgaaacttaaa 18782359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19274480 - 19274418
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||||||| || ||||||||    
T  19274480 tttgggacttttgaaacataaaggacttgtttgggacttttgaaacttaaaggacgactttgg 19274418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38473846 - 38473896
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  38473846 tttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 38473896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 48802548 - 48802594
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaa 52  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  48802548 gacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaa 48802594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49973863 - 49973813
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  49973863 tttgagacttttgaaactttaatgacttgtttgggacttttgaaacttaaa 49973813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 26069813 - 26069752
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||||| || |||||||    
T  26069813 tttgagacttttgaaatttaaaggacttgtttgtgacttttgaaacttaaatgacgactttg 26069752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7608986 - 7609046
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||||    
T  7608986 tttgggactgttgaaacttaaaggacttgtttgggacttttgaaacttaaaggattacttt 7609046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 41105931 - 41105875
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||| || ||||||||||||||||||||||||||||||| || ||||||||    
T  41105931 acttttgaaatttaaaggacttgtttgggacttttgaaacttaaaggacgactttgg 41105875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 45350934 - 45350997
Alignment:
Q  1 tttgagacttttgaaacttgaa-ggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||    
T  45350934 tttgggacttttgaaacttaaaaggacttgtttgagacttttgaaacttaaaagacgactttgg 45350997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24204691 - 24204740
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  24204691 tttgagacttt-gaaacttaaaggacttgtttgggacttttgaaacttaaa 24204740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32373773 - 32373822
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  32373773 tttgagacttttgaaacttaaaggacttgtttggga-ttttgaaacttaaa 32373822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 50533304 - 50533254
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  50533304 tttgagacttttgaaacttaaaggacttgtttgagacttttgtaacttaaa 50533254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18917445 - 18917385
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||| ||||||    
T  18917445 tttgagacttttgaa-cttaaaggacttgtttggggcttttgaaacttaaaggatcactttg 18917385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25988491 - 25988552
Alignment:
Q  1 tttgagacttttgaaacttgaa-ggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||| || ||||||    
T  25988491 tttgagacttttgaaacttaaaaggacttgtttgagacttttgaaacttaaaggacgacttt 25988552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 17989992 - 17990048
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||| || ||||||||||||| ||||||||||||||||| || |||||||    
T  17989992 gacttttgaaatttaaaggacttgtttgagacttttgaaacttaaaggacgactttg 17990048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 49814215 - 49814171
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  49814215 acttttgaaacttaaaggacttgtttaggacttttgaaacttaaa 49814171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 7651813 - 7651855
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  7651813 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 7651855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 9878995 - 9879037
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| ||| |||||||    
T  9878995 aaggacttgtttgggacttttgaaacttaaaggatcactttgg 9879037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 16508139 - 16508181
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  16508139 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 16508181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 21965216 - 21965258
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| ||| |||||||    
T  21965216 aaggacttgtttgggacttttgaaacttaaaggatcactttgg 21965258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 22351115 - 22351073
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  22351115 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 22351073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23228414 - 23228464
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || |||||||||| |||||||||||||||||    
T  23228414 tttgggacttttgaaacttaaatgacttgtttgagacttttgaaacttaaa 23228464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 28425353 - 28425311
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  28425353 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 28425311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 52350135 - 52350177
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  52350135 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 52350177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 17984078 - 17984111
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||||||||||||||||||||||||    
T  17984078 aaggacttgtttgggacttttgaaacttaaaaga 17984111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19315561 - 19315500
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||||||||| ||||||   |||||||||||||||| ||||| || |||||||    
T  19315561 tttgagacttttgaaacttaaaggaccactttgggacttttgaaatttaaaggacgactttg 19315500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41982456 - 41982509
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaaga 54  Q
    |||||||||||||||| || || || |||||| |||||||||||||||||||||    
T  41982456 tttgagacttttgaaatttaaaagatttgttttggacttttgaaacttaaaaga 41982509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46095295 - 46095356
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||| ||||||||||| || ||||||||||  |||||||||||||||| || |||||||    
T  46095295 tttgagatttttgaaacttaaaagacttgtttgaaacttttgaaacttaaaggacgactttg 46095356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 48802321 - 48802280
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||||||||||||||||||||| || |||||||    
T  48802321 aaggacttgtttgggacttttgaaacttaaaggacgactttg 48802280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 9974757 - 9974713
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||| || || |||||||||||||||||||||||||    
T  9974757 acttttgaaacttaaaagatttgtttgggacttttgaaacttaaa 9974713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 52067880 - 52067924
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||    
T  52067880 acttttgaatcttaaaggacttgtttgagacttttgaaacttaaa 52067924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 25800792 - 25800831
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactt 60  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  25800792 aaggacttgtttgggacttttgaaacttaaaggacgactt 25800831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 8141697 - 8141727
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  8141697 aaggacttgtttgggacttttgaaacttaaa 8141727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 9974772 - 9974738
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagat 55  Q
    |||||||||||||| ||||||||||||||||||||    
T  9974772 aaggacttgtttggaacttttgaaacttaaaagat 9974738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 12142995 - 12142965
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  12142995 aaggacttgtttgggacttttgaaacttaaa 12142965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 19315791 - 19315821
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  19315791 aaggacttgtttgggacttttgaaacttaaa 19315821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 24036691 - 24036661
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  24036691 aaggacttgtttgggacttttgaaacttaaa 24036661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 24204461 - 24204431
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  24204461 aaggacttgtttgggacttttgaaacttaaa 24204431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 28425577 - 28425615
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  28425577 gacttgtttgagacttttgaaacttaaaagacgactttg 28425615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36157898 - 36157947
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| ||| ||||||||| |||||||||||||||||    
T  36157898 tttgggacttttgaaacttaaag-acttgtttgagacttttgaaacttaaa 36157947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 36781383 - 36781413
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  36781383 aaggacttgtttgggacttttgaaacttaaa 36781413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 38473837 - 38473867
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  38473837 aaggacttgtttgggacttttgaaacttaaa 38473867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 40721494 - 40721536
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||    
T  40721494 aaggacttgtttgagacttttgaaacttaaaggatcactttgg 40721536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 44978758 - 44978728
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  44978758 aaggacttgtttgggacttttgaaacttaaa 44978728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 44979399 - 44979429
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  44979399 aaggacttgtttgggacttttgaaacttaaa 44979429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 46051601 - 46051631
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  46051601 aaggacttgtttgggacttttgaaacttaaa 46051631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 50690094 - 50690136
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  50690094 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 50690136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 52350144 - 52350206
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||   ||||| |||||||||||||||| || ||||||||    
T  52350144 tttgggacttttgaaacttaaaggacgactttggaacttttgaaacttaaaggacgactttgg 52350206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 7553006 - 7552973
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||||||| ||||||||||||||||    
T  7553006 aaggacttgtttgggacctttgaaacttaaaaga 7552973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 18892259 - 18892218
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  18892259 aaggacttgtttgagacttttgaaacttaaatgacgactttg 18892218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 50
Target Start/End: Original strand, 19274710 - 19274739
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaa 50  Q
    ||||||||||||||||||||||||||||||    
T  19274710 aaggacttgtttgggacttttgaaacttaa 19274739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 26549302 - 26549249
Alignment:
Q  8 cttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||| || ||||||||||||| | ||||||||||||||| || ||||||    
T  26549302 cttttgaaatttaaaggacttgtttgtggcttttgaaacttaaaggacgacttt 26549249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 43396826 - 43396867
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  43396826 aaggacttgtttgagacttttgaaacttaaaggacgactttg 43396867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 45350707 - 45350666
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  45350707 aaggacttgtttgagacttttgaaacttaaaggacgactttg 45350666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 7553242 - 7553298
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||| || ||||||   |||||||||||||||||||||| || ||||||||    
T  7553242 acttttgaaaattaaaggaccactttgggacttttgaaacttaaatgacgactttgg 7553298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 49
Target Start/End: Complemental strand, 16505227 - 16505199
Alignment:
Q  21 aaggacttgtttgggacttttgaaactta 49  Q
    |||||||||||||||||||||||||||||    
T  16505227 aaggacttgtttgggacttttgaaactta 16505199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 21929436 - 21929392
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||| || |||||| ||| |||||||||||||||||    
T  21929436 acttttgaaacttaaatgacttgattgagacttttgaaacttaaa 21929392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 23228184 - 23228152
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaag 53  Q
    ||||||||||| |||||||||||||||||||||    
T  23228184 aaggacttgttagggacttttgaaacttaaaag 23228152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 25988482 - 25988514
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaag 53  Q
    ||||||||||||| |||||||||||||||||||    
T  25988482 aaggacttgtttgagacttttgaaacttaaaag 25988514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 26549539 - 26549579
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||||||| ||||||||||||||||| || ||||||    
T  26549539 aaggacttgtttgagacttttgaaacttaaaggacgacttt 26549579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33673938 - 33673878
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    |||| ||||||| |||||| ||||||   |||||||||||||||||||||| || ||||||    
T  33673938 tttgggacttttaaaacttaaaggaccactttgggacttttgaaacttaaaggacgacttt 33673878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 25 - 53
Target Start/End: Original strand, 45350929 - 45350957
Alignment:
Q  25 acttgtttgggacttttgaaacttaaaag 53  Q
    |||||||||||||||||||||||||||||    
T  45350929 acttgtttgggacttttgaaacttaaaag 45350957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38633924 - 38633977
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38633924 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaaga 38633977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4649071 - 4649021
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  4649071 tttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 4649021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9056586 - 9056647
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||||||||| || || ||||||| ||||||||||||||||| ||||||||||    
T  9056586 tttgagacttttgaaacttaaaagatttgtttgagacttttgaaacttaaaggatgactttg 9056647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43806753 - 43806805
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaag 53  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||||||    
T  43806753 tttgggacttttgaaacttaaatgacttgtttgggacttttgaaacttaaaag 43806805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 513229 - 513167
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||| |||||||| |||||||||||||||| || ||||||||    
T  513229 tttgggacttttgaaacttaaaggatttgtttggtacttttgaaacttaaaggacgactttgg 513167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9884777 - 9884727
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  9884777 tttgagacttttgaaacttaaatgacttgtttgagacttttgaaacttaaa 9884727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39295371 - 39295421
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  39295371 tttgggacttttgaaacttaaatgacttgtttgggacttttgaaacttaaa 39295421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 41536517 - 41536476
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  41536517 aaggacttgtttgggacttttgaaacttaaaagacgactttg 41536476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 39513565 - 39513609
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  39513565 acttttgaaacttaaagaacttgtttgggacttttgaaacttaaa 39513609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15847060 - 15847009
Alignment:
Q  1 tttgagacttttgaaacttgaa-ggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| || |||||||||||| ||||||||||||||||    
T  15847060 tttgagacttttgaaacttaaaaggacttgtttggaacttttgaaacttaaa 15847009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35443232 - 35443181
Alignment:
Q  1 tttgagacttttgaaacttgaa-ggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  35443232 tttgggacttttgaaacttaaaaggacttgtttgggacttttgaaacttaaa 35443181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 259908 - 259866
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  259908 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 259866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 656013 - 656055
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  656013 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 656055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 841748 - 841790
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  841748 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 841790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 1293399 - 1293357
Alignment:
Q  9 ttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||| ||||||||||||| |||||||||||||||||    
T  1293399 ttttgaaacttaaaggacttgtttgagacttttgaaacttaaa 1293357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 8137103 - 8137061
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| |||||||||||    
T  8137103 aaggacttgtttgagacttttgaaacttaaaggatgactttgg 8137061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 12010479 - 12010437
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  12010479 aaggacttgtttgggacttttgaaacttaacggatgactttgg 12010437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 22683978 - 22683936
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  22683978 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 22683936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 22684199 - 22684241
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  22684199 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 22684241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24193503 - 24193553
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||| | ||| | |||||||||||||||||||||||||    
T  24193503 tttgagacttttgaaacataaagtatttgtttgggacttttgaaacttaaa 24193553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 36400060 - 36400018
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  36400060 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 36400018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 37933572 - 37933530
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  37933572 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 37933530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42988446 - 42988496
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||  || ||||||||||||||||||||| |||||    
T  42988446 tttgagacttttgaaacttagagaacttgtttgggacttttgaaatttaaa 42988496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 2533188 - 2533131
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||| ||||||   |||||||||||||||||||||| || ||||||||    
T  2533188 gacttttgaaacttaaaggacgactttgggacttttgaaacttaaaggacgactttgg 2533131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 33651758 - 33651701
Alignment:
Q  5 agacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    |||||||| |||||| ||||||   ||||||||||||||||||||||||| |||||||    
T  33651758 agacttttaaaacttaaaggaccactttgggacttttgaaacttaaaagacgactttg 33651701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 35443241 - 35443209
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaag 53  Q
    |||||||||||||||||||||||||||||||||    
T  35443241 aaggacttgtttgggacttttgaaacttaaaag 35443209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 3876062 - 3876101
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  3876062 gacttgtttgggacttttgaaacttaaaggacgactttgg 3876101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 440761 - 440699
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||| |||||| ||||||   ||||| |||||||||||||||| || ||||||||    
T  440761 tttgagacttttaaaacttaaaggaccactttggaacttttgaaacttaaatgacgactttgg 440699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 440991 - 441021
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  440991 aaggacttgtttgggacttttgaaacttaaa 441021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9056558 - 9056611
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagat 55  Q
    |||| |||||||||||||| ||  ||||||||| |||||||||||||||||||||    
T  9056558 tttgggacttttgaaacttaaaa-acttgtttgagacttttgaaacttaaaagat 9056611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 24430782 - 24430812
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  24430782 aaggacttgtttgggacttttgaaacttaaa 24430812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28707666 - 28707715
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||||||||| |||| |||||| |||||||||    
T  28707666 tttgagacttttgaaacttaaaggacttg-ttggaacttttaaaacttaaa 28707715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 29485217 - 29485175
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||||||  |||||||    
T  29485217 aaggacttgtttgtgacttttgaaacttaaaagaccactttgg 29485175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 54
Target Start/End: Original strand, 33651995 - 33652025
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaaga 54  Q
    |||||||||||||||||||||||||||||||    
T  33651995 gacttgtttgggacttttgaaacttaaaaga 33652025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 35443462 - 35443492
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  35443462 aaggacttgtttgggacttttgaaacttaaa 35443492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 37933793 - 37933835
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  37933793 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 37933835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38107021 - 38106963
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgact 59  Q
    |||| |||||||||||||| || ||||||||||  |||||| |||||||||||| ||||    
T  38107021 tttgggacttttgaaacttaaaagacttgtttgaaacttttaaaacttaaaagacgact 38106963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 54
Target Start/End: Complemental strand, 38107027 - 38106997
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaaga 54  Q
    |||||||||||||||||||||||||||||||    
T  38107027 gacttgtttgggacttttgaaacttaaaaga 38106997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41536747 - 41536808
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||||||| | | | ||||||| | ||||||||||||||||| || |||||||    
T  41536747 tttgagacttttgaaacctaaggaacttgttcgagacttttgaaacttaaatgacgactttg 41536808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 2533426 - 2533454
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaa 52  Q
    |||||||||||||||||||||||||||||    
T  2533426 gacttgtttgggacttttgaaacttaaaa 2533454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 6016336 - 6016376
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||||||| ||||||||||||||||| ||| |||||    
T  6016336 aaggacttgtttgagacttttgaaacttaaatgatcacttt 6016376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 52
Target Start/End: Original strand, 9056552 - 9056580
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaa 52  Q
    |||||||||||||||||||||||||||||    
T  9056552 gacttgtttgggacttttgaaacttaaaa 9056580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 27428448 - 27428492
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||| || || ||||| ||||||||||||||||||||||    
T  27428448 acttttgaaatttaaaagacttatttgggacttttgaaacttaaa 27428492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 44544330 - 44544268
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||| || ||||||||    
T  44544330 tttgagacttttgaaacttaaaggacctgtttgggacttttgaaacttaaaggacgactttgg 44544268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31793839 - 31793892
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaaga 54  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31793839 tttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaaga 31793892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35600342 - 35600392
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  35600342 tttgagacttttgaaacttaaaagacttgtttgggacttttgaaacttaaa 35600392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 48628726 - 48628664
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||| || ||||||||    
T  48628726 tttgagacttttgaaacttaaagaacttgtttgagacttttgaaacttaaaggacgactttgg 48628664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 39241836 - 39241893
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||    
T  39241836 gacttttgaaacttaaaggatttgtttgggacttttgaaacttaaaggatcactttgg 39241893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42979558 - 42979619
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||||||||| || |||||||    
T  42979558 tttgagacttttgaaacttaaaggacttatttggaacttttgaaacttaaaggacgactttg 42979619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2960805 - 2960855
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  2960805 tttgagacttttgaaacttaaaggaattgtttaggacttttgaaacttaaa 2960855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11050481 - 11050531
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| ||| |||||||||| |||||||||||||||||||||||||||||||    
T  11050481 tttgggacatttgaaacttaaaggacttgtttgggacttttgaaacttaaa 11050531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37394218 - 37394267
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  37394218 tttgagactttt-aaacttaaaggacttgtttgggacttttgaaacttaaa 37394267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44800630 - 44800680
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| || || |||||||||||||||||||||||||    
T  44800630 tttgagacttttgaaacttaaatgatttgtttgggacttttgaaacttaaa 44800680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45723711 - 45723761
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  45723711 tttgggacttttgaaacttaaatgacttgtttgggacttttgaaacttaaa 45723761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47219066 - 47219016
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| ||||||||||||||||| |||||||||||||    
T  47219066 tttgggacttttgaaacttaaaggacttgtttgggacgtttgaaacttaaa 47219016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47271902 - 47271852
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||||||||||    
T  47271902 tttgagacttttgaaacttaaaggacttgcttgagacttttgaaacttaaa 47271852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 8162938 - 8162985
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||| || |||||||||||| ||||||||||||||||||    
T  8162938 acttttgaaacttaaaagacttgtttggggcttttgaaacttaaaaga 8162985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 221217 - 221167
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||| |||||    
T  221217 tttgggacttttgaaacttaaaggaattgtttgggacttttgaaagttaaa 221167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7335981 - 7335931
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || |||||||||| |||||||||||||||||    
T  7335981 tttgggacttttgaaacttaaatgacttgtttgagacttttgaaacttaaa 7335931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11476776 - 11476826
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||| |||||||||||| |||||||||    
T  11476776 tttgggacttttgaaacttaaaggacttttttgggacttttaaaacttaaa 11476826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18353065 - 18353015
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| ||||||||||||| |||||| ||||||||||    
T  18353065 tttgggacttttgaaacttaaaggacttgtttgagactttcgaaacttaaa 18353015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 23842456 - 23842498
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||||||| |||||||    
T  23842456 aaggacttgtttgagacttttgaaacttaaaagatcactttgg 23842498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27364559 - 27364609
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || |||||||||| |||||||||||||||||    
T  27364559 tttgtgacttttgaaacttaaaagacttgtttgagacttttgaaacttaaa 27364609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29739622 - 29739572
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| ||||||||||| || |||||||||||||| ||||||||||||||||    
T  29739622 tttgggacttttgaaatttaaaggacttgtttggaacttttgaaacttaaa 29739572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38427782 - 38427832
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  38427782 tttgagacttttgaaacttaaatgacttgtttgaaacttttgaaacttaaa 38427832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 39033983 - 39033921
Alignment:
Q  1 tttgagacttttgaaacttgaagga-cttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    |||| |||||||||||||| || || |||||||||||||||||||||||||| || |||||||    
T  39033983 tttgggacttttgaaacttaaaagaacttgtttgggacttttgaaacttaaaggacgactttg 39033921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 47294281 - 47294239
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  47294281 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 47294239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4923137 - 4923089
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaactta 49  Q
    |||| |||||||||||||| || ||||||||||| ||||||||||||||    
T  4923137 tttgggacttttgaaacttaaatgacttgtttggaacttttgaaactta 4923089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 30972158 - 30972194
Alignment:
Q  27 ttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||||||||||| ||||||||    
T  30972158 ttgtttgggacttttgaaacttaaaagacgactttgg 30972194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 41139638 - 41139693
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||| ||| | ||||||||| ||||||||||||||| || |||||||    
T  41139638 acttttgaaacttaaagaatttgtttggggcttttgaaacttaaaggaagactttg 41139693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 42888802 - 42888763
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  42888802 gacttgtttgggacttttgaaacttaaaggacgactttgg 42888763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 47120147 - 47120186
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  47120147 gacttgtttgggacttttgaaacttaaaggatcactttgg 47120186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 47294505 - 47294544
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  47294505 gacttgtttgggacttttgaaacttaaaggacgactttgg 47294544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 1469704 - 1469734
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  1469704 aaggacttgtttgggacttttgaaacttaaa 1469734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1469713 - 1469775
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||   || ||||||||||||||||||| || ||||||||    
T  1469713 tttgggacttttgaaacttaaaggaccacttcgggacttttgaaacttaaaggacgactttgg 1469775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 11050251 - 11050221
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  11050251 aaggacttgtttgggacttttgaaacttaaa 11050221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 11476546 - 11476516
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  11476546 aaggacttgtttgggacttttgaaacttaaa 11476516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 11476767 - 11476797
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  11476767 aaggacttgtttgggacttttgaaacttaaa 11476797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 30798358 - 30798328
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  30798358 aaggacttgtttgggacttttgaaacttaaa 30798328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30798588 - 30798638
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||| ||||||||| || |||||||||| |||||||||||||||||    
T  30798588 tttgggactattgaaacttaaaagacttgtttgagacttttgaaacttaaa 30798638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 30876410 - 30876440
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  30876410 aaggacttgtttgggacttttgaaacttaaa 30876440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 31684124 - 31684094
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  31684124 aaggacttgtttgggacttttgaaacttaaa 31684094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 31684345 - 31684375
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  31684345 aaggacttgtttgggacttttgaaacttaaa 31684375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 31793830 - 31793860
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  31793830 aaggacttgtttgggacttttgaaacttaaa 31793860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 37393988 - 37393958
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  37393988 aaggacttgtttgggacttttgaaacttaaa 37393958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 38427550 - 38427512
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  38427550 gacttgtttgagacttttgaaacttaaaagacgactttg 38427512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 40851213 - 40851171
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  40851213 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 40851171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 41139399 - 41139369
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  41139399 aaggacttgtttgggacttttgaaacttaaa 41139369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 43752766 - 43752736
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  43752766 aaggacttgtttgggacttttgaaacttaaa 43752736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 43968470 - 43968500
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  43968470 aaggacttgtttgggacttttgaaacttaaa 43968500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43968479 - 43968541
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||   |||||||||||||| ||||||| || ||||||||    
T  43968479 tttgggacttttgaaacttaaaggaccactttgggacttttgacacttaaaggacgactttgg 43968541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 44544560 - 44544602
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||| |||||||||| || ||||||||    
T  44544560 aaggacttgtttgggactttagaaacttaaaggacgactttgg 44544602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 47119921 - 47119891
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  47119921 aaggacttgtttgggacttttgaaacttaaa 47119891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 47219075 - 47219045
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  47219075 aaggacttgtttgggacttttgaaacttaaa 47219045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 47219299 - 47219337
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    |||||||||||||||||||||||||||| || |||||||    
T  47219299 gacttgtttgggacttttgaaacttaaaggacgactttg 47219337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 47281346 - 47281396
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| ||||||||| ||| || ||||||||||||||    
T  47281346 tttgggacttttgaaacttaaaggacttgattgagatttttgaaacttaaa 47281396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 48628956 - 48628998
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  48628956 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 48628998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 30798579 - 30798612
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    |||||||||||||||||| |||||||||||||||    
T  30798579 aaggacttgtttgggactattgaaacttaaaaga 30798612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 33884255 - 33884214
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    |||||||||||||| |||||||||||||||| || |||||||    
T  33884255 aaggacttgtttggtacttttgaaacttaaaggacgactttg 33884214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 35600333 - 35600366
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||| ||||||||||||||||||||    
T  35600333 aaggacttgtttgagacttttgaaacttaaaaga 35600366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 45233669 - 45233710
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  45233669 aaggacttgtttgagacttttgaaacttaaaggacgactttg 45233710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 9e-18; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6600356 - 6600406
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6600356 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 6600406  T

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Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11692367 - 11692417
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11692367 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 11692417  T

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Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 16096179 - 16096241
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  16096179 tttgggacttttgaaacttaaagaacttgtttgggacttttgaaacttaaaagaggactttgg 16096241  T

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Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31710203 - 31710153
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31710203 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 31710153  T

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Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41282263 - 41282201
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||    
T  41282263 tttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacgactttgg 41282201  T

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Target: chr5; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43166480 - 43166542
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||| || ||||||||    
T  43166480 tttgagacttttgaaacttaaaggacttgtttggaacttttgaaacttaaaggacgactttgg 43166542  T

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Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 4016093 - 4016155
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||||||||| || ||||||||    
T  4016093 tttgagatttttgaaacttaaaggacttgtttggtacttttgaaacttaaaggacgactttgg 4016155  T

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Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6331298 - 6331236
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||||    
T  6331298 tttgggacttttgaaacttaaaggacttgcttgggacttttgaaacttaaaggacgactttgg 6331236  T

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Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 6740175 - 6740225
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  6740175 tttgagacttttgaaacttaaaggatttgtttgggacttttgaaacttaaa 6740225  T

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Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8689493 - 8689443
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  8689493 tttgagacttttgaaacttaaaggacttgtttggaacttttgaaacttaaa 8689443  T

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Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20408454 - 20408404
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  20408454 tttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 20408404  T

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Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26593500 - 26593550
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  26593500 tttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 26593550  T

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Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 3352226 - 3352271
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  3352226 gacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 3352271  T

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Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 17002381 - 17002426
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  17002381 gacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 17002426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20517079 - 20517018
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||||||| || |||||||    
T  20517079 tttgggacttttgaaacttataggacttgtttgggacttttgaaacttaaaggacgactttg 20517018  T

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Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6251914 - 6251854
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||    
T  6251914 tttgggacttttgaaacttaaaggacttgtttgagacttttgaaacttaaatgacgacttt 6251854  T

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Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 20079483 - 20079527
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  20079483 acttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 20079527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 27509896 - 27509849
Alignment:
Q  4 gagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  27509896 gagacttttgaaacttaaagaacttgtttgggacttttgaaacttaaa 27509849  T

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Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19661851 - 19661901
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||||    
T  19661851 tttgggacttttgaaacttataggacttgtttgggacttttgaaacttaaa 19661901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28078625 - 28078687
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||| ||||||||||| ||||||||||||||||||  |||||||    
T  28078625 tttgggacttttgaaacttaaagaacttgtttggggcttttgaaacttaaaagaccactttgg 28078687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30297969 - 30298019
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||||||||| ||||||||||||||||    
T  30297969 tttgggacttttgaaacttaaaggacttgtttggaacttttgaaacttaaa 30298019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33760690 - 33760752
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||| ||||| || ||||||||    
T  33760690 tttgggacttttgaaacttaaaggacttgtttgagacttttgaaaattaaaggacgactttgg 33760752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39824477 - 39824427
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||||    
T  39824477 tttgggacttttgaaacttaaatgacttgtttgggacttttgaaacttaaa 39824427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42993439 - 42993389
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  42993439 tttgtgacttttgaaacttaaaggatttgtttgggacttttgaaacttaaa 42993389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 567732 - 567788
Alignment:
Q  5 agacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||| || ||||||    
T  567732 agacttttgaaacttaaaggacttatttgagacttttgaaacttaaaggacgacttt 567788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37923618 - 37923670
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaag 53  Q
    ||||||||||||||||||| ||  ||||||||| |||||||||||||||||||    
T  37923618 tttgagacttttgaaacttaaataacttgtttgagacttttgaaacttaaaag 37923670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1052457 - 1052395
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| |||||    |||||||||||||||||||||| || ||||||||    
T  1052457 tttgagacttttgaaacttaaaggatcactttgggacttttgaaacttaaaggacgactttgg 1052395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11000948 - 11000998
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||||||| |||||||||||| |||||    
T  11000948 tttgggacttttgaaacttaaaggacttgtttaggacttttgaaaattaaa 11000998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 27116318 - 27116364
Alignment:
Q  6 gacttttgaaacttgaa-ggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||| || |||||||||||||||||||||||||||||    
T  27116318 gacttttgaaacttaaaaggacttgtttgggacttttgaaacttaaa 27116364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40074871 - 40074821
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || |||||||||| |||||||||||||||||    
T  40074871 tttgggacttttgaaacttaaacgacttgtttgagacttttgaaacttaaa 40074821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 43166259 - 43166217
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  43166259 aaggacttgtttgagacttttgaaacttaaaagacgactttgg 43166217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 39002205 - 39002238
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||||||||||||||||||||||||    
T  39002205 aaggacttgtttgggacttttgaaacttaaaaga 39002238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 26035560 - 26035599
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  26035560 gacttgtttgggacttttgaaacttaaaggatcactttgg 26035599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 35342096 - 35342049
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaag 53  Q
    |||||||||||||| ||||| ||||||||||||||| ||| |||||||    
T  35342096 gacttttgaaacttaaaggatttgtttgggacttttaaaatttaaaag 35342049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 4015861 - 4015823
Alignment:
Q  24 gacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  4015861 gacttgtttgagacttttgaaacttaaaagacgactttg 4015823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 6251923 - 6251893
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  6251923 aaggacttgtttgggacttttgaaacttaaa 6251893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 6252123 - 6252165
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  6252123 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 6252165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 6331307 - 6331277
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  6331307 aaggacttgtttgggacttttgaaacttaaa 6331277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 6600126 - 6600096
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  6600126 aaggacttgtttgggacttttgaaacttaaa 6600096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 11935596 - 11935638
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  11935596 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 11935638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 14717526 - 14717476
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||||    ||||||||||||||||||||||    
T  14717526 tttgagacttttgaaacttaaaggaacactttgggacttttgaaacttaaa 14717476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 14952254 - 14952224
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  14952254 aaggacttgtttgggacttttgaaacttaaa 14952224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 20408463 - 20408433
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  20408463 aaggacttgtttgggacttttgaaacttaaa 20408433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 20408684 - 20408714
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  20408684 aaggacttgtttgggacttttgaaacttaaa 20408714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 23129137 - 23129183
Alignment:
Q  5 agacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||| ||| | ||||||||||||||||||| |||||    
T  23129137 agacttttgaaacttaaagaatttgtttgggacttttgaaatttaaa 23129183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27457385 - 27457434
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| | |||||| ||||||| ||||||||||||||    
T  27457385 tttgagacttttgaaacttaacggacttctttggga-ttttgaaacttaaa 27457434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 28078395 - 28078365
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  28078395 aaggacttgtttgggacttttgaaacttaaa 28078365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30208617 - 30208667
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| || || ||||||||||||||||||| |||||    
T  30208617 tttgggacttttgaaacttaaatgatttgtttgggacttttgaaatttaaa 30208667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 30297960 - 30297990
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  30297960 aaggacttgtttgggacttttgaaacttaaa 30297990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 33760681 - 33760711
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  33760681 aaggacttgtttgggacttttgaaacttaaa 33760711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 39126042 - 39125996
Alignment:
Q  5 agacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||| || ||||||||| ||| |||||||||||||||||    
T  39126042 agacttttgaaatttaaaggacttggttgagacttttgaaacttaaa 39125996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 39824486 - 39824456
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  39824486 aaggacttgtttgggacttttgaaacttaaa 39824456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 41282272 - 41282242
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  41282272 aaggacttgtttgggacttttgaaacttaaa 41282242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 27116089 - 27116056
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||| ||||||||||||||||||||    
T  27116089 aaggacttgtttgagacttttgaaacttaaaaga 27116056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 51
Target Start/End: Complemental strand, 33760459 - 33760430
Alignment:
Q  22 aggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||||||||||||||    
T  33760459 aggacttgtttgggacttttgaaacttaaa 33760430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 8215815 - 8215759
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||| || ||| | |||||||| |||||||||||||||| || ||||||||    
T  8215815 acttttgaaatttaaagaaattgtttggaacttttgaaacttaaaggacgactttgg 8215759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 30297739 - 30297707
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaag 53  Q
    ||||||||||||| |||||||||||||||||||    
T  30297739 aaggacttgtttgagacttttgaaacttaaaag 30297707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 38964330 - 38964366
Alignment:
Q  27 ttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||| || ||||||||    
T  38964330 ttgtttgggacttttgaaacttaaaggacgactttgg 38964366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 9e-18; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 12196399 - 12196337
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||| || ||||||||    
T  12196399 tttgagacttttgaaacttaaaggacttgtttgtgacttttgaaacttaaaggacgactttgg 12196337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19496365 - 19496427
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||| || ||||||||    
T  19496365 tttgagacttttgaaacttaaaggacctgtttgggacttttgaaacttaaaggacgactttgg 19496427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 31208669 - 31208607
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||| || ||||||||    
T  31208669 tttgatacttttgaaacttaaaggacttgtttgggacttttgaaacttaaaggacgactttgg 31208607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32118635 - 32118585
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  32118635 tttgagacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 32118585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 25730161 - 25730100
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||| | ||||||||||    
T  25730161 tttgagacttttgaaacttaaaggacttgtttgagacttttgaaacttagaggatgactttg 25730100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 44490131 - 44490070
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||| || |||||||    
T  44490131 tttgagacttttgaaacttaaaggacttgtttgagacttttgaaacttaaaggacgactttg 44490070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8882233 - 8882283
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  8882233 tttgagacttttgaaacttaaaggacttgtttgggacttttgaagcttaaa 8882283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28812506 - 28812556
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  28812506 tttgagacttttgaaacttaaagtacttgtttgggacttttgaaacttaaa 28812556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48149420 - 48149370
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  48149420 tttgggacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 48149370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 22298435 - 22298390
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  22298435 gacttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 22298390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 37381762 - 37381705
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||    
T  37381762 gacttttgaaacttaaaggacttgtttgagacttttgaaaattaaaagatcactttgg 37381705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 17847321 - 17847365
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  17847321 acttttgaaacttaaaggacttgtttgggacttttgaaacttaaa 17847365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 33808006 - 33808061
Alignment:
Q  7 acttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| || |||||||    
T  33808006 acttttgaaacttaaaggacttgtttgggacttttgaaaattaaaggacgactttg 33808061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17847344 - 17847394
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| ||||    
T  17847344 tttgggacttttgaaacttaaaggacttgtttgggacttttgaaacctaaa 17847394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20534325 - 20534375
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  20534325 tttgagacttttgaaacttaaaggaattgtttgagacttttgaaacttaaa 20534375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23552983 - 23552933
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  23552983 tttgagacttttgaaacttaaagaacttgtttggaacttttgaaacttaaa 23552933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42273721 - 42273671
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||    
T  42273721 tttgggacttttgaaacttaaaggacttgtttgggacttttaaaacttaaa 42273671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 31590993 - 31590936
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||| ||||| |||||||| |||||||||||||||| || ||||||||    
T  31590993 gacttttgaaacttaaaggatttgtttggaacttttgaaacttaaaggacgactttgg 31590936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 17993228 - 17993270
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  17993228 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 17993270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25734443 - 25734505
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||| |||||| ||||||   |||||||||||||||||||||| || ||||||||    
T  25734443 tttgagacttttaaaacttaaaggaccactttgggacttttgaaacttaaatgacgactttgg 25734505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 26017353 - 26017311
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  26017353 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 26017311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 28264794 - 28264836
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  28264794 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 28264836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31617655 - 31617705
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||| ||||||||||||| |||||||||| || |||||||||||||||||    
T  31617655 tttgaaacttttgaaacttaaaggacttgtatgagacttttgaaacttaaa 31617705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35929961 - 35929911
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||||    
T  35929961 tttgagacttttgaaacttaaaggaccactttgggacttttgaaacttaaa 35929911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39995387 - 39995437
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| ||||| ||| |||||||||||||||||||||    
T  39995387 tttgggacttttgaaacttaaaggatttgattgggacttttgaaacttaaa 39995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 44490470 - 44490512
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  44490470 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 44490512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 49118762 - 49118804
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  49118762 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 49118804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 33693559 - 33693604
Alignment:
Q  6 gacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||    
T  33693559 gacttttgaaacttaaagaacttgcttgggacttttgaaacttaaa 33693604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 48707944 - 48707985
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||||||||||||||||||||| || |||||||    
T  48707944 aaggacttgtttgggacttttgaaacttaaaggacgactttg 48707985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 8882003 - 8881973
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  8882003 aaggacttgtttgggacttttgaaacttaaa 8881973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10588501 - 10588452
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||  |||||||||||| ||||||||||||||    
T  10588501 tttgagacttttgaaacttaaaa-acttgtttgggatttttgaaacttaaa 10588452  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 11795144 - 11795114
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  11795144 aaggacttgtttgggacttttgaaacttaaa 11795114  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11795374 - 11795424
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||  ||||||||||||| ||||||||| |||||||    
T  11795374 tttgtgacttttgaaactaaaaggacttgtttgagacttttgatacttaaa 11795424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 12196620 - 12196662
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||||||||||||| |||||| || ||||||||    
T  12196620 aaggacttgtttgggacttttgaagcttaaaggacgactttgg 12196662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15984931 - 15984885
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaact 47  Q
    |||| |||||||||||||| |||| |||| |||||||||||||||||    
T  15984931 tttgggacttttgaaacttaaagggcttgattgggacttttgaaact 15984885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 15984940 - 15984910
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  15984940 aaggacttgtttgggacttttgaaacttaaa 15984910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 15985161 - 15985191
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  15985161 aaggacttgtttgggacttttgaaacttaaa 15985191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17993237 - 17993299
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||| |||||||||||||| ||||||   ||||| |||||||||||||||| || ||||||||    
T  17993237 tttgggacttttgaaacttaaaggacgactttggaacttttgaaacttaaaggacgactttgg 17993299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 25730391 - 25730433
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  25730391 aaggacttgtttgagacttttgaaacttaaaggacgactttgg 25730433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 28160173 - 28160207
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttggg 35  Q
    ||||||||||||||||||| |||||||||||||||    
T  28160173 tttgagacttttgaaacttaaaggacttgtttggg 28160207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 28264573 - 28264543
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  28264573 aaggacttgtttgggacttttgaaacttaaa 28264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 28812277 - 28812235
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||    
T  28812277 aaggacttgtttgagacttttgaaacttaaaggatcactttgg 28812235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 30467218 - 30467260
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||    
T  30467218 aaggatttgtttgggacttttgaaacttaaaggatcactttgg 30467260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 31973742 - 31973784
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    |||||||||||||| |||||||||||||||| ||| |||||||    
T  31973742 aaggacttgtttggaacttttgaaacttaaaggatcactttgg 31973784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 33174010 - 33173968
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||| ||||||||||||||||| || ||||||||    
T  33174010 aaggacttgtttgagacttttgaaacttaaatgacgactttgg 33173968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 42273730 - 42273700
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  42273730 aaggacttgtttgggacttttgaaacttaaa 42273700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 48149650 - 48149680
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  48149650 aaggacttgtttgggacttttgaaacttaaa 48149680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 49118541 - 49118500
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttg 62  Q
    ||||||||||||| ||||||||||||||||| || |||||||    
T  49118541 aaggacttgtttgagacttttgaaacttaaaggacgactttg 49118500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 1425308 - 1425360
Alignment:
Q  9 ttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgacttt 61  Q
    ||||||||||| ||||| |||||||| |||||| ||||||||| ||| |||||    
T  1425308 ttttgaaacttaaaggatttgtttggaacttttaaaacttaaatgatcacttt 1425360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 49
Target Start/End: Complemental strand, 50276128 - 50276100
Alignment:
Q  21 aaggacttgtttgggacttttgaaactta 49  Q
    |||||||||||||||||||||||||||||    
T  50276128 aaggacttgtttgggacttttgaaactta 50276100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5104 - 5054
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  5104 tttgagacttttgaaacttaaagaacttgtttggaacttttgaaacttaaa 5054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 5247 - 5309
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||| ||||||||||| || |||||||||| ||||||||||||||||||||  |||||||    
T  5247 tttgagatttttgaaacttaaatgacttgtttgagacttttgaaacttaaaagaccactttgg 5309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 703 - 745
Alignment:
Q  5 agacttttgaaacttgaaggacttgtttgggacttttgaaact 47  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  703 agacttttgaaacttaaaggacttgtttgagacttttgaaact 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 1890 - 1848
Alignment:
Q  5 agacttttgaaacttgaaggacttgtttgggacttttgaaact 47  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  1890 agacttttgaaacttaaaggacttgtttgagacttttgaaact 1848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1977 - 2027
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||| | |||||| |||||| |||||||||||||||||    
T  1977 tttgagacttttgaaacataaaggacatgtttgagacttttgaaacttaaa 2027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 5751 - 5793
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaagatgactttgg 63  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  5751 aaggacttgtttgggacttttgaaacttaaaggacgactttgg 5793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11286 - 11236
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    ||||||||||||||||||| ||||| |||||||||||||||| ||| ||||    
T  11286 tttgagacttttgaaacttaaaggatttgtttgggacttttgtaacctaaa 11236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 219037 - 219070
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||||||||||||||||||||||||    
T  219037 aaggacttgtttgggacttttgaaacttaaaaga 219070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Original strand, 2184 - 2214
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  2184 aaggacttgtttgggacttttgaaacttaaa 2214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 13016 - 12966
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| ||||| |||||||| || |||||||||| |||||||||||||||||    
T  13016 tttgggacttgtgaaacttaaaagacttgtttgagacttttgaaacttaaa 12966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 13025 - 12992
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||||||||| ||||||||||||||    
T  13025 aaggacttgtttgggacttgtgaaacttaaaaga 12992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 51
Target Start/End: Complemental strand, 14579 - 14549
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||||||||||||||||||||||||||||    
T  14579 aaggacttgtttgggacttttgaaacttaaa 14549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47883 - 47833
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| |||||||||||||| ||||| |||||||  ||||||||||||||||    
T  47883 tttgggacttttgaaacttaaaggatttgtttgaaacttttgaaacttaaa 47833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 59828 - 59878
Alignment:
Q  1 tttgagacttttgaaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||| ||||| |||||||| || |||||||||| |||||||||||||||||    
T  59828 tttgggacttgtgaaacttaaaagacttgtttgagacttttgaaacttaaa 59878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 54
Target Start/End: Original strand, 59819 - 59852
Alignment:
Q  21 aaggacttgtttgggacttttgaaacttaaaaga 54  Q
    ||||||||||||||||||| ||||||||||||||    
T  59819 aaggacttgtttgggacttgtgaaacttaaaaga 59852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1986 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 51 - 14
Alignment:
Q  14 aaacttgaaggacttgtttgggacttttgaaacttaaa 51  Q
    |||||| || ||||||||||||||||||||||||||||    
T  51 aaacttaaatgacttgtttgggacttttgaaacttaaa 14  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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