View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7586_low_7 (Length: 262)
Name: NF7586_low_7
Description: NF7586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7586_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 31042062 - 31042297
Alignment:
| Q |
1 |
gacacggtgttttgataattatgctgagtttattgaatatattgagcaaaagtggtatacacacatggttgttccaagaccaattcctgtaagtgaagga |
100 |
Q |
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| T |
31042062 |
gacacggtgttttgataattatgctgagtttattgaatatattgagcaaaagtggtatacacacatgattgttccaagaccaattcttgtaagtgaagga |
31042161 |
T |
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| Q |
101 |
aacggaaattaaaataaactttatgtattatttagtatttacatttgaaaacaaaacctttttcttcatttgaaaagtacttgtggtcaactatttttaa |
200 |
Q |
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| T |
31042162 |
aacggaaattaaaataaactttatgtattatttagtatttacattttaaaacaaaacctttttcttcatttgaaaagtacttgtggtcaactatttttaa |
31042261 |
T |
|
| Q |
201 |
actgatacaaagtcaaaatggtcgtatcatgctcaa |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
31042262 |
actgatacaaagtcaaaatggtcgtatcatgctcaa |
31042297 |
T |
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