View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7587_low_17 (Length: 264)
Name: NF7587_low_17
Description: NF7587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7587_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 29415594 - 29415852
Alignment:
| Q |
1 |
atctattgtgttttctcacaaggatctgacacacacatatttaacagtaatgatgttgtcatgcaagatgcatgtaactaaatgacacactgataacatt |
100 |
Q |
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| T |
29415594 |
atctattgtgttttctcacaaggatctgacacacacacatttaacagtaatgatgttgtcatgcaagatgcatgtaactaaatgacacactgataacatt |
29415693 |
T |
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| Q |
101 |
tctttgtgatgtaggagtctttggcagattgtggattctaaaaagtgagatgccaaataactgatataggaggccctggcatatttaatctgtcatagtt |
200 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29415694 |
tctttgtgatgtaggagtctttggcagattgtgaattctaaaaagtgagatgccaaataactgatataggaggccctggcatatttaatctgtcatagtt |
29415793 |
T |
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| Q |
201 |
tttcttgtatgaggactgtgatctaatagttatataacaaatttcatacaacacgaaac |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29415794 |
tttcttgtatgaggactgtgatctaatagttatataacaaatttcatacaacacgaaac |
29415852 |
T |
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