View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7587_low_20 (Length: 207)
Name: NF7587_low_20
Description: NF7587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7587_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 43768195 - 43768010
Alignment:
| Q |
10 |
ttggtgttaacatttgcaactcagcaaacatctgtacgtgccaaatgcaaaattaaggttagagttttatgattgatttcatgtccaagttaagtagtat |
109 |
Q |
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| T |
43768195 |
ttggtgttaacatttgcaactcagcaaacatctgtacgtaccaaatgcaaaattaaggttagagttttatgattgatttcatgtccaagttaagtagtat |
43768096 |
T |
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| Q |
110 |
atgctctgtgcctccacagtatttatca-ttcgaaaactgtgcaatatgtccacatcttagaatttcctctacctatgtttctatc |
194 |
Q |
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| T |
43768095 |
atgctctgtgcctccacagtatttatcatttggaaaactgtgcaatatgtccacatcttagaatttcctctacctatgtttctatc |
43768010 |
T |
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