View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7587_low_4 (Length: 634)
Name: NF7587_low_4
Description: NF7587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7587_low_4 |
 | |
|
| [»] scaffold0209 (1 HSPs) |
| | |
|
| [»] scaffold0343 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 235; Significance: 1e-129; HSPs: 18)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 288 - 545
Target Start/End: Original strand, 48531600 - 48531858
Alignment:
| Q |
288 |
accaacaccacttcctctcaatctcattcaaggttgttttctcttagcttctcatatctcataaatacaac-gctcttgcaaacaagacgtgataggtga |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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|
| T |
48531600 |
accaacaccacttcctctcaatctcattcaaggttgttttctcttagcttctcatatctcataaatacaaatgctcttgcaaacaagacgtgataggtga |
48531699 |
T |
|
| Q |
387 |
acaggtttgtctgctcaaagtcttagatgatacaaatcatatgttaccaagaatctggcacaccaacatgctttttaagtacaactaaacacccaacata |
486 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48531700 |
acaggtttgtctgctcaaagtcttatatgatacaaatcatttgttaccaagaatatggcacaccaacatgctttttaagtacaactaaacacccaacata |
48531799 |
T |
|
| Q |
487 |
tacaattacaagactagaatgaacataatttgcagtcctttttcaagtcaaacatgttt |
545 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48531800 |
tacaattacaagactagaatgaacataatttgcagtcctttttcaagtcaaacatgttt |
48531858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 331 - 604
Target Start/End: Original strand, 48528882 - 48529156
Alignment:
| Q |
331 |
ttagcttctcatatctcataaatacaacgctcttgcaaacaagacgtgataggtgaacaggtttgtctgctcaaagtcttagatgatacaaatcatatgt |
430 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
48528882 |
ttagcttctcatatctcataaatacaatgctcttgcaaacaagacgtgataggtgaacagttctgtctgctcaaagtcttagatgatacaaatcatttgt |
48528981 |
T |
|
| Q |
431 |
taccaagaatctggcacaccaacatgctttttaagtacaactaaacacccaacatatacaattacaagactagaatg-aacataatttgcagtccttttt |
529 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||| |
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|
| T |
48528982 |
tacctagaatatggcacaccaacatgctttttaaatacaactaaacaccaaacatatacaattacaagactagaatgaaacataatttgcagcccttttt |
48529081 |
T |
|
| Q |
530 |
caagtcaaacatgtttctgttattggcaaagtaatttatcaaatagaaagtattttaaacattgacatatatatt |
604 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
48529082 |
caagtcaaacatgtttttgttattggcaaagtaatttatcaaatagaaagtatttcaaacattgacatatatatt |
48529156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 20 - 246
Target Start/End: Complemental strand, 8431633 - 8431406
Alignment:
| Q |
20 |
gatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcattatttttgt-gtccggtagttagtgccttagtgttagggtggtttttaaggg |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
8431633 |
gatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcatttttttttttgaccggtagttagtgccttagtgttggggtggtttttaaggg |
8431534 |
T |
|
| Q |
119 |
gtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgcacgggcttcttggttaa |
218 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |
|
|
| T |
8431533 |
gtttttgttcgagccggtgttttgttgcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgcacgggcttcttgatcaa |
8431434 |
T |
|
| Q |
219 |
taattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|||| ||||||||||||||||| ||||| |
|
|
| T |
8431433 |
taatattttgccgtttcaaaaaaaaaaa |
8431406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 43073178 - 43073034
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtt-tattttttccatccgagcttgttagtgcatcttgc |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || | ||||||||| || ||||| |||||||||||||| |
|
|
| T |
43073178 |
gggtggtttttaaggggtttttgttcgagccggtgttttaaggcaaccgatttccccttgtattcttttttttccacccaagcttattagtgcatcttgc |
43073079 |
T |
|
| Q |
202 |
acgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
43073078 |
acgggcttgttggttaataatattttgccgattcaaaaaaaaaaa |
43073034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 100 - 246
Target Start/End: Original strand, 31525360 - 31525507
Alignment:
| Q |
100 |
ttagggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatct |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | | ||||||||| || ||||| ||||||| ||| |
|
|
| T |
31525360 |
ttagggtggtttttaaggggtttttgttcgagccgttgtttgtgtggcaaccgatttccccttgtttgttttttttccacccaagcttattagtgcttct |
31525459 |
T |
|
| Q |
199 |
tgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||| ||||| |||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
31525460 |
tgcacaggcttgttggttaataatattttgccgattcaaaaaaaaaaa |
31525507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 28934861 - 28934724
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttt-tccatccgagcttgttagtgcatcttgcacgggc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| |||| |||||||| ||||||| |||||||||||| |
|
|
| T |
28934861 |
tttttaaggggtttttgttcgagccggtgttt-gtggcaaccgatttccccttgttttgttttttctccacccgagcttattagtgcttcttgcacgggc |
28934763 |
T |
|
| Q |
208 |
ttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|| |||||||||||| |||||| |||||||| ||||| |
|
|
| T |
28934762 |
ttgttggttaataatattttgctaattcaaaaaaaaaaa |
28934724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 10454279 - 10454422
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgtt-ttgtggcaaccgatttccccttgtgtttatttttt-----ccatccgagcttgttagtgcat |
196 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| | |||||||| ||| |||||||| ||||||| |
|
|
| T |
10454279 |
gggtggtttttaaggggtttttgtttgagccggctttcttgtggcaaccgatttccccttgtatgtattttttttttcccacccgagcttattagtgctc |
10454378 |
T |
|
| Q |
197 |
cttgcacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||| ||||||||| |
|
|
| T |
10454379 |
cttgcacgggcttgttggttaataatattttgccatttcaaaaa |
10454422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 94 - 230
Target Start/End: Complemental strand, 44656369 - 44656229
Alignment:
| Q |
94 |
ttagtgttagggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgt---gtttattttt-tccatccgagcttgtt |
189 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||||||| | ||||| | ||||||||||||| ||||||| |||| ||||| |||| |||||||| || |
|
|
| T |
44656369 |
ttagttttagggtggtttttaagggatttttgttcgagtctgtgttatatggcaaccgattttcccttgtatggtttttttttctccacccgagcttatt |
44656270 |
T |
|
| Q |
190 |
agtgcatcttgcacgggcttcttggttaataattttttgcc |
230 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
44656269 |
tgtgcatcttgcacgggcttgttggttaataatattttgcc |
44656229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 103 - 222
Target Start/End: Original strand, 47820897 - 47821022
Alignment:
| Q |
103 |
gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt----ccatccgagcttgttagtgcat |
196 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| | | |||||||| ||| |||||||| ||||||| | |
|
|
| T |
47820897 |
gggtggtttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttccccttctttgtatttttttcctccacccgagcttattagtgcgt |
47820996 |
T |
|
| Q |
197 |
cttgcacgggcttcttggttaataat |
222 |
Q |
| |
|
||||||||||||| |||||||||||| |
|
|
| T |
47820997 |
cttgcacgggcttgttggttaataat |
47821022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 103 - 240
Target Start/End: Complemental strand, 9358883 - 9358743
Alignment:
| Q |
103 |
gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgt-ttattttttccatccgagcttgttagtgcatctt |
199 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||| | | || |||| |||| || ||||| ||||| | ||| |
|
|
| T |
9358883 |
gggtggtttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttccccttctatgtttttttctccacccaagcttattagtacttctc |
9358784 |
T |
|
| Q |
200 |
gcacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
|||||||||| |||| ||||||| |||||||| |||||||| |
|
|
| T |
9358783 |
gcacgggcttgttgggtaataatattttgccgattcaaaaa |
9358743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 52076066 - 52076209
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttt------tccatccgagcttgttagtgcatcttgca |
202 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||||||||||| |||||||| | ||||||| |||| |||||||| ||||||| ||| ||| |
|
|
| T |
52076066 |
tttttaaggggtttttgttcgagcgtttgttttatggcaaccgattaccccttgtttgtattttttttttctccacccgagcttattagtgcttctcgca |
52076165 |
T |
|
| Q |
203 |
cgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||||| ||||||| |||| |||||||| |||||||| ||||| |
|
|
| T |
52076166 |
cgggcttgttggttagtaatattttgccgattcaaaaaaaaaaa |
52076209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 53349401 - 53349527
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg--tgtttattttttccatccgagcttgttagtgcatctt |
199 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| || |||||||||||| |||||| |||||| |||| ||| || || || ||||||| |||| |
|
|
| T |
53349401 |
gggtggtttttaaggggtttttgtttgagccggtgtttgtgcggcaaccgattttcccttgtatgtttaattttcccacccaagtttattagtgcttctt |
53349500 |
T |
|
| Q |
200 |
gcacgggcttcttggttaataattttt |
226 |
Q |
| |
|
||| | |||| |||||||||||||||| |
|
|
| T |
53349501 |
gcatgagcttgttggttaataattttt |
53349527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 20701152 - 20701292
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttt---tccatccgagcttgttagtgcatcttgcacgg |
205 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||||||| |||||||||||||| | ||||||| | || |||||||| ||||||| ||||| |||| |
|
|
| T |
20701152 |
tttttaaggggtttttgttcgagccgtagttgtgtggcaatcgatttccccttgtttgtatttttttcttcacccgagcttattagtgcttcttgtacgg |
20701251 |
T |
|
| Q |
206 |
gcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||| |||||||||||| |||||| | || ||||| ||||| |
|
|
| T |
20701252 |
gctcgttggttaataatattttgctgatttaaaaaaaaaaa |
20701292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 28956952 - 28957079
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccct--tgtgtttattttttccatccgagcttgttagtgcatcttgcacgg |
205 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| ||||| || |||||||| | |||| |||||||||| |
|
|
| T |
28956952 |
ttttaaaggggtttttgttcgagccggtgtttgtgtggcaaccgatttccccttctttgtttttttttctcacccgagcttatcagtgtttcttgcacgg |
28957051 |
T |
|
| Q |
206 |
gcttcttggttaataattttttgccgtt |
233 |
Q |
| |
|
||| |||||||||||| ||||| |||| |
|
|
| T |
28957052 |
acttgttggttaataatattttgtcgtt |
28957079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 553 - 604
Target Start/End: Original strand, 48531969 - 48532020
Alignment:
| Q |
553 |
tggcaaagtaatttatcaaatagaaagtattttaaacattgacatatatatt |
604 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48531969 |
tggcaaagtaatttatcaaatagaaagtattttaaacattgacatatatatt |
48532020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 109 - 240
Target Start/End: Original strand, 42881885 - 42882019
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttg----tgtttattttttccatccgagcttgttagtgcatcttgcacg |
204 |
Q |
| |
|
||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||| ||| | |||||||| |||||||| ||||||||||||| ||| |
|
|
| T |
42881885 |
tttttaaggcgtttttgtttgagccggtgtattgtggcaatcgatttccccttgtatttgtgttttttttcctcccgagctttttagtgcatcttgtacg |
42881984 |
T |
|
| Q |
205 |
ggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
|||| |||| ||||||| |||||||| || ||||| |
|
|
| T |
42881985 |
agcttgttgg-taataatattttgccgatttaaaaa |
42882019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 103 - 222
Target Start/End: Original strand, 46750212 - 46750333
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttttc---catccgagcttgttagtgcatctt |
199 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||||||||||| |||||||||||| || |||| ||| |||||| || |||||||| |||||||||||| |
|
|
| T |
46750212 |
gggtggtttttaaggg-tttttgttcgaaccggtgttttgcggcaaccgattttcctttgtattttctttttctttcacccgagcttattagtgcatctt |
46750310 |
T |
|
| Q |
200 |
gcacgggcttcttggttaataat |
222 |
Q |
| |
|
| || | || |||||||||||| |
|
|
| T |
46750311 |
gtacagatttgttggttaataat |
46750333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 55166955 - 55166895
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg |
162 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||| |
|
|
| T |
55166955 |
gggtggtttttaaggggtttttgttcgagccaaagtttgtgcggcaaccgatttccccttg |
55166895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 132; Significance: 3e-68; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 25 - 230
Target Start/End: Original strand, 31833817 - 31834019
Alignment:
| Q |
25 |
aggggtatgcttgcggattgtcatttgtatatgtctgcgtcattatttttgtgtccggtagttagtgccttagtgttagggtggtttttaaggggttttt |
124 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
31833817 |
aggggtatgcttgcggattgccatttgtatatgtctgcgtcattacttttgtgactggtagtttgtgccttagtgttggggtggtttttaaggggttttt |
31833916 |
T |
|
| Q |
125 |
gttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgcacgggcttcttggttaataattt |
224 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||||||| | |||||| || ||||||||||||||||||||||||||| || |||||||||||| | |
|
|
| T |
31833917 |
gttcgagccggtgttatgtggcaaccgattttcccttgtat---tttttttcacccgagcttgttagtgcatcttgcacggatttgttggttaataatat |
31834013 |
T |
|
| Q |
225 |
tttgcc |
230 |
Q |
| |
|
|||||| |
|
|
| T |
31834014 |
tttgcc |
31834019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 100 - 245
Target Start/End: Original strand, 12172951 - 12173097
Alignment:
| Q |
100 |
ttagggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatct |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| | | ||||||||| || ||||| ||||||| ||| |
|
|
| T |
12172951 |
ttagggtggtttttaaggggtttttgttcgagctgatgtttgtgtggcaaccgatttccccttgtttgttttttttccacccaagcttattagtgcttct |
12173050 |
T |
|
| Q |
199 |
tgcacgggcttcttggttaataattttttgccgtttcaaaaataaaa |
245 |
Q |
| |
|
||||||||||| |||||||||||| |||||||| |||||||| |||| |
|
|
| T |
12173051 |
tgcacgggcttgttggttaataatattttgccgattcaaaaaaaaaa |
12173097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 20 - 246
Target Start/End: Original strand, 19472721 - 19472944
Alignment:
| Q |
20 |
gatgcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcattatttttgtgtccggtagttagtgccttagtgttagggtggtttttaagggg |
119 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||||||| ||||||||||| | ||||| || || ||||||| | ||||||||||||| ||| |
|
|
| T |
19472721 |
gatgcaggggtatgcttgtggtctgtcacttgtatatgcctgcgtcattactcttgtg-------gtgtgttccttagtttatgggtggtttttaaaggg |
19472813 |
T |
|
| Q |
120 |
-tttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttc--catccgagcttgttagtgcatcttgcacgggcttcttggt |
215 |
Q |
| |
|
|||||||||||||||| |||| | ||||||| ||||||||||| | | ||||||||| || |||||||| ||||||| |||||||||||||| ||||| |
|
|
| T |
19472814 |
atttttgttcgagccggagtttgtatggcaactgatttccccttctttgtattttttctccacccgagcttattagtgcgtcttgcacgggcttgttggt |
19472913 |
T |
|
| Q |
216 |
taataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||||| |||||||| |||||||| ||||| |
|
|
| T |
19472914 |
taataatattttgccgattcaaaaaaaaaaa |
19472944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 103 - 221
Target Start/End: Original strand, 46757306 - 46757425
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgtt-ttgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgc |
201 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||| | || ||||||||| | |||||| |||||||||||||| |
|
|
| T |
46757306 |
gggtggtttttaaagggtttttgttcgagctggtgttattgtggcaatcgatttccccttatattgtttttttccacctgagcttattagtgcatcttgc |
46757405 |
T |
|
| Q |
202 |
acgggcttcttggttaataa |
221 |
Q |
| |
|
|||||||| ||||||||||| |
|
|
| T |
46757406 |
acgggcttgttggttaataa |
46757425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 26990601 - 26990739
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgc |
201 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||| || || ||||| |||||| ||||||| | | ||||||||| || ||||| ||||||| |||||| |
|
|
| T |
26990601 |
gggtggtttttaagggatttttgtttgagccggtgcttgtgcggcaatcgattttcccttgtatgttttttttccacccaagcttattagtgcttcttgc |
26990700 |
T |
|
| Q |
202 |
acgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
|||||||| |||||||||||| |||||||| |||||||| |
|
|
| T |
26990701 |
acgggcttattggttaataatattttgccgattcaaaaa |
26990739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 8463097 - 8462958
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttattttttc--catccgagcttgttagtgcatcttgcacgg |
205 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| | ||||||||| || ||||||| ||||||| ||||||||| |
|
|
| T |
8463097 |
tttttaaggggtttttgttcgagccgacgtttttgtggcaaccgattttcccttgtatgtattttttctccacccgagctaattagtgcttcttgcacga |
8462998 |
T |
|
| Q |
206 |
gcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|||| |||||||||||| |||| || ||||||||| ||||| |
|
|
| T |
8462997 |
gcttgttggttaataatatttt-ccatttcaaaaaaaaaaa |
8462958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 103 - 222
Target Start/End: Complemental strand, 42442142 - 42442019
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgt---ttattttttccatccgagcttgttagtgcatct |
198 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| | || |||||| || |||||||| ||||||| ||| |
|
|
| T |
42442142 |
gggtggtttttaaggggtttttgttcgagtcggtgttttaatggcaaccgatttcccgttgtttgtattttttttttcacccgagcttattagtgcttct |
42442043 |
T |
|
| Q |
199 |
tgcacgggcttcttggttaataat |
222 |
Q |
| |
|
||||||| ||| |||||||||||| |
|
|
| T |
42442042 |
tgcacggacttgttggttaataat |
42442019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 47028931 - 47029072
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtg-ttttgtggcaaccgatttccccttgtgttta-----ttttttccatccgagcttgttagtgcat |
196 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| ||||||||| |||||||| ||| ||| | |
|
|
| T |
47028931 |
gggtagtttttaaggggtttttgttcgagccggtgtttttgcggcaaccgatttccccttgtatttatgtttttttttccacccgagcttattaatgcgt |
47029030 |
T |
|
| Q |
197 |
cttgcacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
|||||||| ||| |||||| |||| ||| ||||||||||||| |
|
|
| T |
47029031 |
cttgcacgaacttgttggtt--taatatttggccgtttcaaaaa |
47029072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 38548673 - 38548821
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg--tgtttatttttt--ccatccgagcttgttagtgcatc |
197 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||| | |||||||||||||||||||| ||||| |||||| ||| |||||||| ||||||| || |
|
|
| T |
38548673 |
gggtggtttttaaggggggtttgttcgagccaaattttgtatggcaaccgatttccccttgcttgtttttttttttcccacccgagcttattagtgcgtc |
38548772 |
T |
|
| Q |
198 |
ttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||||||| || |||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
38548773 |
ttgcacgggtttgttggttaataatattttgccgattcaaaaaaaaaaa |
38548821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 41956016 - 41955891
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgtt-ttgtggcaaccgatttccccttgtgt-----ttattttttccatccgagcttgttagtgcatcttgca |
202 |
Q |
| |
|
|||||||||| |||||||||||||||||||| || ||||||||||||||||||||| | || |||| ||||||| ||||| |||||| |||||||| |
|
|
| T |
41956016 |
tttttaagggatttttgttcgagccggtgttattatggcaaccgatttccccttgtattttagtttttttctccatccaagcttattagtgtatcttgca |
41955917 |
T |
|
| Q |
203 |
cgggcttcttggttaataattttttg |
228 |
Q |
| |
|
|| || |||||||||||| ||||| |
|
|
| T |
41955916 |
cgaatttgttggttaataatattttg |
41955891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 43268739 - 43268645
Alignment:
| Q |
103 |
gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccct--tgtgtttattttttccatccgagcttgttagtg |
193 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| | ||||| |||| |||| |||||||| |||||| |
|
|
| T |
43268739 |
gggtggtttttaaaggggtttttgttcgagccggtgtttgtgcggcaaccgatttccccttctttgttttttttctccacccgagcttattagtg |
43268645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 26384960 - 26385100
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgt---ttattttttccatccgagcttgttagtgcatct |
198 |
Q |
| |
|
||||||||||||||||| ||||||| |||| ||||||| | || ||||||||||||| |||| | || ||||||||| || ||||| |||| || ||| |
|
|
| T |
26384960 |
gggtggtttttaagggggttttgtttgagctggtgtttgtatgacaaccgatttccctttgtttgtatttttttttccacccaagcttattagcgcttct |
26385059 |
T |
|
| Q |
199 |
tgcacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
|| |||||||| | |||||||||| |||| | |||||||||| |
|
|
| T |
26385060 |
tg-acgggcttgtcggttaataatattttactgtttcaaaaa |
26385100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 28447722 - 28447863
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgt---ttattttttccatccgagcttgttagtgcatcttgcacg |
204 |
Q |
| |
|
|||||||| |||||||||||| || | ||||| | | ||||||||||| ||||||| | || |||||| || ||| || ||||||| ||||||||| |
|
|
| T |
28447722 |
tttttaagaggtttttgttcgtgctgatgtttatattgcaaccgattttcccttgtttgtcttttttttttcactcgaatttattagtgcttcttgcacg |
28447821 |
T |
|
| Q |
205 |
ggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||| |||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
28447822 |
ggcttgttggttaataatattttgccgattcaaaaaaaaaaa |
28447863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 245
Target Start/End: Original strand, 43460698 - 43460848
Alignment:
| Q |
104 |
ggtggttttt-aaggggtttttgttcgagccggtgttttg--tggcaaccgatttccccttgt--gtttattttttc----catccgagcttgttagtgc |
194 |
Q |
| |
|
|||||||||| |||||||||||||||||| | |||||||| | ||||||||||||||||| | |||| ||||||| || | ||||| ||||||| |
|
|
| T |
43460698 |
ggtggtttttgaaggggtttttgttcgagtcagtgttttgtatcgcaaccgatttccccttcttagttttttttttcttttcaccttagcttattagtgc |
43460797 |
T |
|
| Q |
195 |
atcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaa |
245 |
Q |
| |
|
||| |||| | ||| |||||||||||| ||||| || |||||||| |||| |
|
|
| T |
43460798 |
ttctcgcacagacttgttggttaataatattttgtcgattcaaaaaaaaaa |
43460848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 90; Significance: 4e-43; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 103 - 240
Target Start/End: Complemental strand, 46691981 - 46691839
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt----ccatccgagcttgttagtgcatc |
197 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| ||| |||||||||||||||| || |
|
|
| T |
46691981 |
gggtggtttttaaggggtttttgttcgagccggtgtttatgtggcaaccgatttccccttgtatgtattttttttctccacccgagcttgttagtgcttc |
46691882 |
T |
|
| Q |
198 |
ttgcacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||| |||||||| |
|
|
| T |
46691881 |
ttgcacgggcttgttggttaataatattttgccgattcaaaaa |
46691839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 30655727 - 30655586
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttttgtg--gcaaccgatttccccttgtgtttatttttt--ccatccgagcttgttagtgcatcttgcacg |
204 |
Q |
| |
|
|||||||| |||||||||||||| || | ||||||| ||||||||||||||||||| | |||||||| ||| |||||||| ||||||| ||||||||| |
|
|
| T |
30655727 |
tttttaagaggtttttgttcgagtcgatattttgtgtggcaaccgatttccccttgtttgtattttttttccacccgagcttattagtgcgtcttgcacg |
30655628 |
T |
|
| Q |
205 |
ggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
30655627 |
ggcttgttggttaataatattttgccgtttcaaaaaaaaaaa |
30655586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 22197675 - 22197816
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttg-----tgtttattttttccatccgagcttgttagtgcatcttgcac |
203 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||| ||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
22197675 |
tttttaaggggtttttgttcgagacggtgttttgtggtaatcgatttccccttgtaatttgttt-ttttttccacccgagctttttagtgcaccttgcac |
22197773 |
T |
|
| Q |
204 |
gggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|| ||| |||||||||||| |||| | |||||||||| ||||| |
|
|
| T |
22197774 |
ggacttgttggttaataatattttacagtttcaaaaaaaaaaa |
22197816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 22240146 - 22240005
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttg-----tgtttattttttccatccgagcttgttagtgcatcttgcac |
203 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| || ||||||||||||| ||||| ||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
22240146 |
tttttaaggggtttttgttcgagacggtgttttgtggtaatcgatttccccttgtaatttgttt-ttttttccacccgagctttttagtgcaccttgcac |
22240048 |
T |
|
| Q |
204 |
gggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|| ||| |||||||||||| |||| | |||||||||| ||||| |
|
|
| T |
22240047 |
ggacttgttggttaataatattttacagtttcaaaaaaaaaaa |
22240005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 36615927 - 36615808
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgcacgggct |
208 |
Q |
| |
|
||||||| |||||||||||||||| || |||| |||||||||||||||||||||| || ||||||||| |||||||| ||||||| ||||||||||||| |
|
|
| T |
36615927 |
tttttaaagggtttttgttcgagctggagttt-gtggcaaccgatttccccttgttttgtttttttccacccgagcttattagtgcttcttgcacgggct |
36615829 |
T |
|
| Q |
209 |
tcttggttaataattttttgc |
229 |
Q |
| |
|
| |||| ||||||| |||||| |
|
|
| T |
36615828 |
tgttgggtaataatattttgc |
36615808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 100 - 245
Target Start/End: Complemental strand, 31424912 - 31424761
Alignment:
| Q |
100 |
ttagggtggttttt--aaggggtttttgttcgagccggtgttttg--tggcaaccgatttccccttgt--gtttattttttccatccgagcttgttagtg |
193 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||||||||||| | ||||||||||||||||||| | |||| |||| |||| || ||||| |||||| |
|
|
| T |
31424912 |
ttagggtggttttttaaaggggtttttgatcgagccggtgtttcgaatggcaaccgatttccccttctttgttttttttctccacccaagcttattagtg |
31424813 |
T |
|
| Q |
194 |
catcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaa |
245 |
Q |
| |
|
||||||||||| || |||||||||||| |||||||| |||||||| |||| |
|
|
| T |
31424812 |
tttcttgcacgggtttgttggttaataatattttgccgcttcaaaaaaaaaa |
31424761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 1039191 - 1039051
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgt--gtttattttttccatccgagcttgttagtgcatcttgcacgg |
205 |
Q |
| |
|
||||||||||||||||||||||||| |||| | | ||||||||||| ||||||| |||| |||| |||| |||||||| ||||||| |||||||||| |
|
|
| T |
1039191 |
tttttaaggggtttttgttcgagccaaagtttgtattgcaaccgattttcccttgtttgttttttttatccacccgagcttattagtgcttcttgcacgg |
1039092 |
T |
|
| Q |
206 |
gcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|||| | |||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
1039091 |
gcttgtcggttaataatattttgccgtttgaaaaaaaaaaa |
1039051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 109 - 222
Target Start/End: Complemental strand, 49035983 - 49035865
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgt----ttattttttccatccgagcttgttagtgcatcttgcac |
203 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| | || |||| |||| |||||||| ||||||| ||||| || |
|
|
| T |
49035983 |
tttttaaggggtttttgttcgaaccggtgtttatgtggcaaccgatttccccttgtttgtaatttttttctccacccgagcttattagtgcttcttgtac |
49035884 |
T |
|
| Q |
204 |
gggcttcttggttaataat |
222 |
Q |
| |
|
|| ||| |||||||||||| |
|
|
| T |
49035883 |
ggacttgttggttaataat |
49035865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 106 - 228
Target Start/End: Original strand, 41702867 - 41702992
Alignment:
| Q |
106 |
tggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg--tgtttattttttccatccgagcttgttagtgcatcttgca |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||| ||||| |||| |||| || | ||| ||||||| |||||| |
|
|
| T |
41702867 |
tggtttttaaggggtttttgttcgagccggtgtttgtgcggcaaccgacttccccttgtatgttttttttctccacccaaacttattagtgctccttgca |
41702966 |
T |
|
| Q |
203 |
cgggcttcttggttaataattttttg |
228 |
Q |
| |
|
|||||| |||||| ||||| ||||| |
|
|
| T |
41702967 |
cgggctagttggttgataatattttg |
41702992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 33320710 - 33320817
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgcacgggc |
207 |
Q |
| |
|
||||||||||| |||||||||||||||||||| | ||||||| |||||||||||| ||| ||| ||| |||||||| ||||||| |||||||||||| |
|
|
| T |
33320710 |
tttttaagggggttttgttcgagccggtgtttgtaaggcaaccaatttccccttgttttt---tttcccacccgagcttattagtgcttcttgcacgggc |
33320806 |
T |
|
| Q |
208 |
ttcttggttaa |
218 |
Q |
| |
|
|| |||||||| |
|
|
| T |
33320807 |
ttgttggttaa |
33320817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 240
Target Start/End: Original strand, 32678937 - 32679083
Alignment:
| Q |
100 |
ttagggtggtttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttattttttc-----catccgagcttgttagtg |
193 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||| || |||| | ||||| |||||| |||||| ||| |||||| || ||||||| |||||| |
|
|
| T |
32678937 |
ttagagtggtttttaaggggtttttgttccagccagtattttagcggcaatcgatttttccttgtattttttttttttttttcactcgagcttattagtg |
32679036 |
T |
|
| Q |
194 |
catcttgcacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
| |||||||||||||| ||||||||||| ||| ||||||| ||||| |
|
|
| T |
32679037 |
cgtcttgcacgggcttgttggttaataaaatttagccgtttaaaaaa |
32679083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 42598053 - 42598130
Alignment:
| Q |
169 |
ttttttccatccgagcttgttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|||| |||| || ||||| ||||||| ||||||||||| || |||||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
42598053 |
ttttctccacccaagcttattagtgcttcttgcacgggtttgttggttaataatattttgccgttttaaaaaaaaaaa |
42598130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 43397640 - 43397781
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttg------tgtttattttttccatccgagcttgttagtgcat |
196 |
Q |
| |
|
||||||||||| | |||||||||||||||| | |||||||||||||| ||||| || ||| | ||| |||||| || || ||||| ||||||| | |
|
|
| T |
43397640 |
gggtggttttttaagggtttttgttcgagcagttgttttgtggcaacagattttcctttgtatgtttttttttttttttcacccaagctt-ttagtgctt |
43397738 |
T |
|
| Q |
197 |
cttgcacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
|||||||||| || ||||||||||| | ||||||| |||||||| |
|
|
| T |
43397739 |
cttgcacgggtttattggttaataa-tatttgccgattcaaaaa |
43397781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 30655807 - 30655761
Alignment:
| Q |
23 |
gcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcatta |
69 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| | ||||||||| |
|
|
| T |
30655807 |
gcaggggtatgcttgtggattgtcatttgtatatgccggcgtcatta |
30655761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 86; Significance: 9e-41; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 97 - 233
Target Start/End: Original strand, 38908663 - 38908800
Alignment:
| Q |
97 |
gtgttagggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgttta-ttttttccatccgagcttgttagtgca |
195 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| |||| |||||| || |||||||| |||||||| |
|
|
| T |
38908663 |
gtgttggggtggtttttaaggggtttttgttcgaaccggtgttttgtggctaccgattttcccttgtatttattttttttcacccgagcttattagtgca |
38908762 |
T |
|
| Q |
196 |
tcttgcacgggcttcttggttaataattttttgccgtt |
233 |
Q |
| |
|
|||||||||| ||| |||||||||||| |||||||||| |
|
|
| T |
38908763 |
tcttgcacggccttattggttaataatattttgccgtt |
38908800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 103 - 230
Target Start/End: Original strand, 41419617 - 41419748
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgtt-ttgtggcaaccgatttccccttgtgtttatttttt---ccatccgagcttgttagtgcatct |
198 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||| |||||| ||| |||||||| ||||||||||| |
|
|
| T |
41419617 |
gggtggtttttaaggggtttttgttcgagtcggtgttattatggcaaccgatttccccttgtatttgtttttttttccacccgagcttattagtgcatct |
41419716 |
T |
|
| Q |
199 |
tgcacgggcttcttggttaataattttttgcc |
230 |
Q |
| |
|
||||||||||| |||||||||||| ||||||| |
|
|
| T |
41419717 |
tgcacgggcttgttggttaataatattttgcc |
41419748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 103 - 240
Target Start/End: Complemental strand, 14732473 - 14732334
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttattttttcc-atccgagcttgttagtgcatcttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||| | || ||||||||||||||||| || |||||||| | |||||||| |||||||| || | |
|
|
| T |
14732473 |
gggtggtttttaaggggtttttgttcgagctggtatttttgcggtaaccgatttccccttgtattatttttttcccacccgagcttattagtgcacctcg |
14732374 |
T |
|
| Q |
201 |
cacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
||||||||| |||||||||||| ||||||| ||||||||| |
|
|
| T |
14732373 |
cacgggcttgttggttaataatattttgccttttcaaaaa |
14732334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 103 - 221
Target Start/End: Complemental strand, 41378332 - 41378216
Alignment:
| Q |
103 |
gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttg |
200 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||| |||| ||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |
|
|
| T |
41378332 |
gggtggtttttaaaggggtttttattcgagccggagtttgtgtggcaaccgatttcccctt-tgt---atttttccacccgagcttattagtgcatcttt |
41378237 |
T |
|
| Q |
201 |
cacgggcttcttggttaataa |
221 |
Q |
| |
|
||||||||| ||||||||||| |
|
|
| T |
41378236 |
cacgggcttgttggttaataa |
41378216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 22649193 - 22649053
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttttg--tggcaaccgatttccccttgtgtttattttt-tccatccgagcttgttagtgcatcttgcacgg |
205 |
Q |
| |
|
|||| |||||||||||| || ||||||||||| | ||||||||||||||||||| | | | ||||| || | || ||||| ||||| | |||||||||| |
|
|
| T |
22649193 |
ttttaaaggggtttttgatcaagccggtgtttggaatggcaaccgatttccccttctttgtttttttctctacccaagcttattagtacttcttgcacgg |
22649094 |
T |
|
| Q |
206 |
gcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|||| ||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
22649093 |
gcttgttggttaataaaattttgccgcttcaaaaaaaaaaa |
22649053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 222
Target Start/End: Original strand, 43356750 - 43356803
Alignment:
| Q |
169 |
ttttttccatccgagcttgttagtgcatcttgcacgggcttcttggttaataat |
222 |
Q |
| |
|
|||||| || |||| ||| |||||||||||||||||| ||| |||||||||||| |
|
|
| T |
43356750 |
tttttttcacccgaacttattagtgcatcttgcacggacttattggttaataat |
43356803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 81; Significance: 8e-38; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 40930961 - 40930818
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttatttttt-ccatccgagcttgttagtgcatcttgc |
201 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||||||| | |||||||| ||| |||||||| ||||||| |||||| |
|
|
| T |
40930961 |
gggtggtttttaaggagtttttgttcgagccgttgttt-gtgacaaccgatttccccttgtttgtatttttttccacccgagcttattagtgcttcttgc |
40930863 |
T |
|
| Q |
202 |
acgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|||||||| |||||||||||| ||||||| ||||||||| ||||| |
|
|
| T |
40930862 |
acgggcttgttggttaataatattttgccatttcaaaaaaaaaaa |
40930818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 110 - 246
Target Start/End: Complemental strand, 13959347 - 13959207
Alignment:
| Q |
110 |
ttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt---ccatccgagcttgttagtgcatcttgcacgg |
205 |
Q |
| |
|
|||||||||||||||||| |||||||||||| ||||||||||||||| || |||| | |||||||| ||| |||||||| ||| ||| |||||||||| |
|
|
| T |
13959347 |
ttttaaggggtttttgtttgagccggtgtttatgtggcaaccgattttcctttgtttgtatttttttttccacccgagcttattattgcttcttgcacgg |
13959248 |
T |
|
| Q |
206 |
gcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|||| |||| ||||||| ||||||||||||||||| ||||| |
|
|
| T |
13959247 |
gcttgttggctaataatattttgccgtttcaaaaaaaaaaa |
13959207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 24200753 - 24200614
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgc |
201 |
Q |
| |
|
|||||||||||||| | |||||||||||||||||||||| | |||||||||||||||||||| | | ||||||||| || ||||| ||||||| |||||| |
|
|
| T |
24200753 |
gggtggtttttaagtg-tttttgttcgagccggtgtttttgcggcaaccgatttccccttgtatgttttttttccacccaagcttattagtgcttcttgc |
24200655 |
T |
|
| Q |
202 |
acgggcttcttggttaataattttttgccgtttcaaaaata |
242 |
Q |
| |
|
|||| ||| ||| |||||||| |||||||| || ||||||| |
|
|
| T |
24200654 |
acggacttgttgattaataatattttgccgattaaaaaata |
24200614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 103 - 240
Target Start/End: Complemental strand, 25829399 - 25829259
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt---ccatccgagcttgttagtgcatct |
198 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||||| | || ||||||||||||||||| | |||||||| ||| |||||||| ||||||| ||| |
|
|
| T |
25829399 |
gggtggtttttaaggggtttttattcaagccggtgtttatagggaaaccgatttccccttgtttgtatttttttttccacccgagcttattagtgcttct |
25829300 |
T |
|
| Q |
199 |
tgcacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
||||||||||| ||||||||||| | ||||||| |||||||| |
|
|
| T |
25829299 |
tgcacgggcttgttggttaataa-tatttgccgattcaaaaa |
25829259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 5200615 - 5200469
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgt-ttattttttccatccgagcttgttagtgcatcttg |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| || |||||||||||| ||||||| | || |||| |||| || | ||| |||||| ||||| |
|
|
| T |
5200615 |
gggtgatttttaaggggtttttgttcgagccggtgtttgtgcggcaaccgattttcccttgtatgtttttttctccacccaaacttattagtgtttcttg |
5200516 |
T |
|
| Q |
201 |
cacgggcttcttggttaataattttttgccgtttcaaaaataaaaag |
247 |
Q |
| |
|
||||| ||| |||||||||||| |||||||| || ||||| |||||| |
|
|
| T |
5200515 |
cacggacttgttggttaataatattttgccgattaaaaaaaaaaaag |
5200469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 103 - 239
Target Start/End: Original strand, 22839250 - 22839391
Alignment:
| Q |
103 |
gggtggtttttaagggg-tttttgttcgagccggtgttttgt--ggcaaccgatttccccttgtgtttattttt--tccatccgagcttgttagtgcatc |
197 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||| |||||| | |||||||||||||| ||| | | | ||||| ||||||||| ||| ||||||| || |
|
|
| T |
22839250 |
gggtggtttttaaagggatttttgttcgagccgatgttttatatggcaaccgatttcctcttctttgtttttttcctccatccgaacttattagtgcgtc |
22839349 |
T |
|
| Q |
198 |
ttgcacgggcttcttggttaataattttttgccgtttcaaaa |
239 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||| ||||||| |
|
|
| T |
22839350 |
ttgcacgggcttgttggttaataatattttgccgattcaaaa |
22839391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 38086551 - 38086402
Alignment:
| Q |
103 |
gggtggttttt--aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt---ccatccgagcttgttagtgcat |
196 |
Q |
| |
|
||||||||||| |||||||||||||||||||| | |||| | ||||||||||||| ||||| | | |||||||| ||| |||||||| ||||||| | |
|
|
| T |
38086551 |
gggtggttttttaaaggggtttttgttcgagccagagtttgtatggcaaccgattttcccttctttgtatttttttctccacccgagcttattagtgcgt |
38086452 |
T |
|
| Q |
197 |
cttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| | ||| |||| ||||| |
|
|
| T |
38086451 |
cttgcacgggcttattggttaataatattttgctgattctaaaaaaaaaa |
38086402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 10124866 - 10124935
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttttgt--ggcaaccgatttccccttgtgtttattttttcc |
176 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | | |||||||| |
|
|
| T |
10124866 |
tttttaaggggtttttgttcgagccggtgttttgttaggcaaccgatttccccttgtttgttttttttcc |
10124935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 30836272 - 30836116
Alignment:
| Q |
103 |
gggtggtttttaa-ggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttt-------tccatccgagctt----gtt |
189 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||| || ||||| |||||||||||| | ||| ||||| ||||||||||||| || |
|
|
| T |
30836272 |
gggtggtttttaaaggggtttttgttcgagccggtatttgtgcggcaatcgatttccccttctttttttttttttttttctccatccgagcttattaatt |
30836173 |
T |
|
| Q |
190 |
agtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||| ||| ||||| |||| |||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
30836172 |
agtgcttctcgcacgagcttgttggttaataatattttgccgattcaaaaaaaaaaa |
30836116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 197 - 246
Target Start/End: Original strand, 7845135 - 7845184
Alignment:
| Q |
197 |
cttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
7845135 |
cttgcacgggcttgttggttaataatattttgccgtttcaaaaaaaaaaa |
7845184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 44362994 - 44362918
Alignment:
| Q |
169 |
ttttttccatccgagcttgttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaa |
245 |
Q |
| |
|
|||||||||||||| ||| ||||||| |||||||| || || |||||||||||| ||| |||||||||||| |||| |
|
|
| T |
44362994 |
ttttttccatccgaacttattagtgcttcttgcacaggattgttggttaataataattttccgtttcaaaaaaaaaa |
44362918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 272 - 333
Target Start/End: Complemental strand, 38542786 - 38542725
Alignment:
| Q |
272 |
cactcactctcacatcaccaacaccacttcctctcaatctcattcaaggttgttttctctta |
333 |
Q |
| |
|
|||||| |||||||||||||||| || ||||||||| | || ||||| |||||||||||||| |
|
|
| T |
38542786 |
cactcattctcacatcaccaacatcatttcctctcactttctttcaaagttgttttctctta |
38542725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 584187 - 584123
Alignment:
| Q |
182 |
agcttgttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||| ||||||| ||||| |||||||| |||| ||||||| |||||||||||||| || ||||| |
|
|
| T |
584187 |
agcttattagtgcttcttgtacgggcttgttggctaataatattttgccgtttcaacaaaaaaaa |
584123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 7845080 - 7845138
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg |
162 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
7845080 |
gggtggtttttaaggggatt--gttcgagccggtgttaatgttgcaaccgatttccccttg |
7845138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 66; Significance: 7e-29; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 109 - 230
Target Start/End: Original strand, 16572074 - 16572198
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttatttttt--ccatccgagcttgttagtgcatcttgcacgg |
205 |
Q |
| |
|
||||||| ||| |||||||||| |||||||||| | |||||||||||||||||||| |||||||||| ||| |||||||| ||||||||||| |||||| |
|
|
| T |
16572074 |
tttttaaaggggttttgttcgaaccggtgtttttgcggcaaccgatttccccttgtatttattttttttccacccgagcttattagtgcatctcgcacgg |
16572173 |
T |
|
| Q |
206 |
gcttcttggttaataattttttgcc |
230 |
Q |
| |
|
|||| |||||||||||| ||||||| |
|
|
| T |
16572174 |
gcttgttggttaataatattttgcc |
16572198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 111 - 245
Target Start/End: Complemental strand, 47571694 - 47571560
Alignment:
| Q |
111 |
tttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttttc-catccgagcttgttagtgcatcttgcacgggctt |
209 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||| |||| ||||||| |||||||||| || |||||||| ||||||| ||| |||||| || |
|
|
| T |
47571694 |
tttaaggggtttttgtttgagccggtgttt-gtggcaaccaattttcccttgtatttattttttttcacccgagcttattagtgctccttccacgggttt |
47571596 |
T |
|
| Q |
210 |
cttggttaataattttttgccgtttcaaaaataaaa |
245 |
Q |
| |
|
|||||||||||| |||||||| |||||||| |||| |
|
|
| T |
47571595 |
gttggttaataatattttgccgattcaaaaaaaaaa |
47571560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 103 - 246
Target Start/End: Original strand, 32183275 - 32183425
Alignment:
| Q |
103 |
gggtggttttt--aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccct--tgtgtttatttt-ttccatccgagcttgttagtgcat |
196 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||| | ||||| |||| ||||| |||||||| ||||||| |
|
|
| T |
32183275 |
gggtggttttttaaaggggtttttgttcgagccggtgtttgtatggcaaccgatttccccttctttgttttttttcttccacccgagcttattagtgcgc |
32183374 |
T |
|
| Q |
197 |
cttgcacgggctt-cttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||| || ||||| ||||| |
|
|
| T |
32183375 |
cttgcacgggcttgtttggttaataatattttgccgatttaaaaaaaaaaa |
32183425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 144 - 240
Target Start/End: Complemental strand, 15187072 - 15186975
Alignment:
| Q |
144 |
ggcaaccgatttccccttgtgtttattttt-tccatccgagcttgttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
|||||||||||||||||||| || ||||| |||| || ||||| |||||||||||||||||||||| |||||||||||| |||||||| |||||||| |
|
|
| T |
15187072 |
ggcaaccgatttccccttgtattcttttttatccacccaagcttattagtgcatcttgcacgggcttgttggttaataatattttgccgattcaaaaa |
15186975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 246 - 333
Target Start/End: Original strand, 5341706 - 5341793
Alignment:
| Q |
246 |
agctcctataaatatatcaacccttacactcactctcacatcaccaacaccacttcctctcaatctcattcaaggttgttttctctta |
333 |
Q |
| |
|
|||||||||||||| | |||||| | |||||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||||| |
|
|
| T |
5341706 |
agctcctataaataaacaaaccctcagactcactctcacatcaccaacatcacttcctctcattctctttcaaggtcgttttctctta |
5341793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 106 - 240
Target Start/End: Complemental strand, 55133233 - 55133102
Alignment:
| Q |
106 |
tggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgcacg |
204 |
Q |
| |
|
|||||||||| |||||||||||||||| | ||||| |||||||| | ||||||| |||| | | || ||| |||||||| || ||||||| ||||||||| |
|
|
| T |
55133233 |
tggtttttaaagggtttttgttcgagctgatgtttgtgtggcaatcaatttccc-ttgtttgttttcttttcatccgagtttattagtgcttcttgcacg |
55133135 |
T |
|
| Q |
205 |
ggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
||||| |||||||||| ||||| ||||||||||| |
|
|
| T |
55133134 |
ggctt---ggttaataatattttgtcgtttcaaaaa |
55133102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 103 - 240
Target Start/End: Complemental strand, 25641407 - 25641263
Alignment:
| Q |
103 |
gggtggttttt--aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt----ccatccgagcttgttagtgca |
195 |
Q |
| |
|
||||||||||| || |||||||||||||||||| |||| | |||||||| |||||||||| | | |||||||| ||| || ||||| ||||||| |
|
|
| T |
25641407 |
gggtggttttttaaaagggtttttgttcgagccgatgttagtatggcaaccaatttccccttctttgtattttttttctccacccaagctttttagtgct |
25641308 |
T |
|
| Q |
196 |
tcttgcacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
25641307 |
tcttgcacgggcttgttggttaataacattttgccgattcaaaaa |
25641263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 102 - 240
Target Start/End: Complemental strand, 16662441 - 16662301
Alignment:
| Q |
102 |
agggtggtttttaa-ggggtttttgttcgagccggtgttttgt--ggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatct |
198 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||| ||||||||| |||||| ||||| ||||| | | ||||||||| | ||||| ||||||| ||| |
|
|
| T |
16662441 |
agggtggtttttaaaggggtttttgtacgagccagtgttttgtatggcaacagattttcccttcttagt-ttttttccaccttagcttattagtgcttct |
16662343 |
T |
|
| Q |
199 |
tgcacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
|||||||||| |||||||||||| |||||| | |||||||| |
|
|
| T |
16662342 |
cgcacgggcttgttggttaataatattttgctgattcaaaaa |
16662301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 104 - 240
Target Start/End: Complemental strand, 42390906 - 42390766
Alignment:
| Q |
104 |
ggtggtttttaaggggtttttgttcgagccggtgtttt-gtggcaaccgatttccccttgtgtttattttt---tccatccgagcttgttagtgcatctt |
199 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| | ||||||||||| |||| | ||| ||||| |||| |||||||| ||||| | |||| |
|
|
| T |
42390906 |
ggtggtttttaaggggtttttgtttgagccggtgttttagcggcaaccgattgttccttttatttgtttttttctccacccgagcttattagtacgtctt |
42390807 |
T |
|
| Q |
200 |
gcacgggcttcttggttaataattttttgccgtttcaaaaa |
240 |
Q |
| |
|
|||||||||| |||| ||||| ||| |||| |||||||| |
|
|
| T |
42390806 |
gcacgggcttgttggaaaataaaatttagccgattcaaaaa |
42390766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 25222218 - 25222278
Alignment:
| Q |
246 |
agctcctataaatatatcaacccttacactcactctcacatcaccaacaccacttcctctc |
306 |
Q |
| |
|
|||||||||||||| || |||| ||| |||||||||||||||||||||| ||||| ||||| |
|
|
| T |
25222218 |
agctcctataaataaataaacctttatactcactctcacatcaccaacatcactttctctc |
25222278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 45511440 - 45511390
Alignment:
| Q |
196 |
tcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||| | |||||||| ||||| |
|
|
| T |
45511440 |
tcttgcacgggcttgttggttaataatattttgctgattcaaaaaaaaaaa |
45511390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 103 - 222
Target Start/End: Complemental strand, 23173107 - 23172985
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt--ccatccgagcttgttagtgcatctt |
199 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| | |||||| |||||| |||||| | |||||||| ||| |||||||| ||||||| |||| |
|
|
| T |
23173107 |
gggtggtttttaagggggttttgttcgagccggtgtttatagggcaactgatttctccttgtttgtattttttttccacccgagcttattagtgcttctt |
23173008 |
T |
|
| Q |
200 |
gcacgggcttcttggttaataat |
222 |
Q |
| |
|
|||||||||| |||||||||||| |
|
|
| T |
23173007 |
gcacgggcttgttggttaataat |
23172985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 22887211 - 22887337
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttatttt-ttccatccgagcttgttagtgcatcttgc |
201 |
Q |
| |
|
||||||||||||||||||||||||| || || || |||||||||||| ||||| ||||| | ||| |||| | ||| |||||||| ||||||||||| || |
|
|
| T |
22887211 |
gggtggtttttaaggggtttttgtttgaacctgtcttttgtggcaactgattttcccttatattttttttctcccacccgagcttattagtgcatctcgc |
22887310 |
T |
|
| Q |
202 |
acgggcttcttggttaataattttttg |
228 |
Q |
| |
|
|||||||| |||||||||||| ||||| |
|
|
| T |
22887311 |
acgggcttgttggttaataatattttg |
22887337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 9931935 - 9931785
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt-------ccatccgagcttgttagtgc |
194 |
Q |
| |
|
||||||||||| ||| |||||||||||||| ||||||| || ||||||||||||||||| || | |||||||| ||| || ||||||||||||| |
|
|
| T |
9931935 |
gggtggtttttgaggtgtttttgttcgagctggtgtttgtgcggcaaccgatttcccctcgtttgtatttttttttcttcccacccaagcttgttagtgc |
9931836 |
T |
|
| Q |
195 |
atcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||| |||||||||||| ||||| |
|
|
| T |
9931835 |
ttcttgcacgggcttgttggttaataa-tatttaccgtttcaaaaaaaaaaa |
9931785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 94 - 228
Target Start/End: Original strand, 25539810 - 25539947
Alignment:
| Q |
94 |
ttagtgttagggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtt----tattttttccatccgagcttgtt |
189 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||| || | |||||| || |||||||| || |
|
|
| T |
25539810 |
ttagttttggggtggtttttaaggggtttttgttcgagccgatgtttgatggcaaccgatttcctcttgtatttttgtttttttttcacccgagcttatt |
25539909 |
T |
|
| Q |
190 |
agtgcatcttgcacgggcttcttggttaataattttttg |
228 |
Q |
| |
|
| ||| |||||||||||||| |||| ||||||| ||||| |
|
|
| T |
25539910 |
aatgcttcttgcacgggcttgttgg-taataatattttg |
25539947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 10431063 - 10431204
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgt--gtttattttt-tccatccgagcttgttagtgcatcttgcacg |
204 |
Q |
| |
|
|||||| | |||||||||||||| |||||||| |||||||||||||||| |||||| |||| ||||| |||| |||| ||| ||| ||| ||||||||| |
|
|
| T |
10431063 |
tttttatgaggtttttgttcgagtcggtgtttgtgtggcaaccgatttctccttgtttgtttttttttctccacccgaacttattaatgcttcttgcacg |
10431162 |
T |
|
| Q |
205 |
ggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|| || ||| |||||||| |||| |||||||||||| ||||| |
|
|
| T |
10431163 |
ggtttgttgattaataatatttttccgtttcaaaaaaaaaaa |
10431204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 819254 - 819134
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtt-tattttttccatccgagcttgttagtgcatcttgcacgggc |
207 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||||||||||||||| |||| || | ||||||||| |||| ||| ||||||| |||| ||||| | |
|
|
| T |
819254 |
tttttaaggggtttttgttcgagttggtg-tttgtggcaaccgatttccctttgttttattttttttccacccgaacttattagtgcttcttacacggac |
819156 |
T |
|
| Q |
208 |
ttcttggttaataattttttgc |
229 |
Q |
| |
|
|| |||| ||||||| |||||| |
|
|
| T |
819155 |
ttattgggtaataatattttgc |
819134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 103 - 245
Target Start/End: Complemental strand, 3677924 - 3677779
Alignment:
| Q |
103 |
gggtggtttttaaggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtt----tattttttccatccgagcttgttagtgcatct |
198 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||| ||| ||||||||||| ||||||| || | ||||||||| |||||||| ||||||||||| |
|
|
| T |
3677924 |
gggtggtttttaaggggtttttgtttgagccagtgtattgcggcaaccgattgtcccttgtattcttgttttttttccacccgagcttattagtgcatct |
3677825 |
T |
|
| Q |
199 |
tgcacgggcttcttggttaataattttttgccgtttcaaaaataaaa |
245 |
Q |
| |
|
||| |||||| |||| ||||||| | |||| | |||||||| |||| |
|
|
| T |
3677824 |
cgcatgggcttgttgg-taataatatattgctgattcaaaaaaaaaa |
3677779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 118 - 246
Target Start/End: Complemental strand, 42241708 - 42241577
Alignment:
| Q |
118 |
ggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttcc--atccgagcttgttagtgcatcttgcacgggcttcttgg |
214 |
Q |
| |
|
||||||||||| |||||| |||| | |||| |||||||||||||| | | |||||||| | |||||||||| |||||||||||||| ||| ||| |||| |
|
|
| T |
42241708 |
ggtttttgttcaagccggagtttgtatggcgaccgatttccccttctttgtatttttttctcatccgagcttattagtgcatcttgcccggacttattgg |
42241609 |
T |
|
| Q |
215 |
ttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|||||||| |||||||| || ||||| ||||| |
|
|
| T |
42241608 |
ttaataatattttgccgattaaaaaaaaaaaa |
42241577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 2292168 - 2292222
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttttgt--ggcaaccgatttcccctt |
161 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
2292168 |
tttttaaggggtttttgttcgagccggtgttttgttaggcaaccgatttcccctt |
2292222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 9597800 - 9597742
Alignment:
| Q |
188 |
ttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||||| |||||||| ||||| |||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
9597800 |
ttagtgcttcttgcacaggcttgttggttaataatattttgccgattcaaaaaaaaaaa |
9597742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 109 - 246
Target Start/End: Complemental strand, 33112844 - 33112703
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg--tgtttattttttccatccga-gcttgttagtgcatcttgcacg |
204 |
Q |
| |
|
||||||||||||||||||||||||| |||| | |||||||||||||||||||| ||||| |||||||| || | |||| ||||||| ||||||||| |
|
|
| T |
33112844 |
tttttaaggggtttttgttcgagccaaagtttgtatggcaaccgatttccccttgcttgttttttttttcccccccaagctttttagtgcgtcttgcacg |
33112745 |
T |
|
| Q |
205 |
ggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||| |||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
33112744 |
ggcttgttggttaataatattttgccgattcaaaaaaaaaaa |
33112703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 10246910 - 10247049
Alignment:
| Q |
103 |
gggtggtttttaa-ggggtttttgttcgagccggtgttttgtggcaaccgatttccccttgtgtttattttttccatccgagcttgttagtgcatcttgc |
201 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| |||| |||||||||| ||||| | | | |||| |||| | || | | ||||||| |||||| |
|
|
| T |
10246910 |
gggtggtttttaaaggggtttttgttcgagccggtgttgtgtgacaaccgattttcccttctttgttttttctccacctgaaccttttagtgcttcttgc |
10247009 |
T |
|
| Q |
202 |
acgggcttcttggttaataat-tttttgccgtttcaaaaa |
240 |
Q |
| |
|
|||||||| |||||||||||| ||||||||| || ||||| |
|
|
| T |
10247010 |
acgggcttgttggttaataatatttttgccgattaaaaaa |
10247049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 109 - 247
Target Start/End: Original strand, 11546772 - 11546912
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttattttttc-catccgagcttgttagtgcatcttgcacggg |
206 |
Q |
| |
|
||||||||| |||||||||||||||||||||| | || ||||||||||| |||| | | | ||||||| || |||||||| ||||||| |||||||||| |
|
|
| T |
11546772 |
tttttaaggagtttttgttcgagccggtgtttgtatgacaaccgatttctccttctttgttttttttctcacccgagcttattagtgctacttgcacggg |
11546871 |
T |
|
| Q |
207 |
cttcttggttaataattttttgccgtttcaaaaataaaaag |
247 |
Q |
| |
|
||| | ||||||||| ||||||||||| ||||| |||||| |
|
|
| T |
11546872 |
cttgtcagttaataatattttgccgtttaaaaaaaaaaaag |
11546912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 102 - 237
Target Start/End: Original strand, 6575720 - 6575860
Alignment:
| Q |
102 |
agggtggtttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt----ccatccgagcttgttagtgcat |
196 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||||| | || |||| ||||| || |||||| |||||||| ||| |||| ||| ||||||| | |
|
|
| T |
6575720 |
agggtggtttttaagaggtttttgttcgagccgatgtttgtatgacaactgattttcctttgtgtgtatttttttcttccacccgaacttattagtgctt |
6575819 |
T |
|
| Q |
197 |
cttgcacgggcttcttggttaataattttttgccgtttcaa |
237 |
Q |
| |
|
||||||||||||| ||| |||||||| |||||||| ||||| |
|
|
| T |
6575820 |
cttgcacgggcttgttgattaataatattttgccgattcaa |
6575860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 103 - 245
Target Start/End: Original strand, 15859093 - 15859244
Alignment:
| Q |
103 |
gggtggttttt--aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttcccc----ttgtgtttattttttccatccgagcttgttagtgca |
195 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |||| ||| |||| |||| |||||||| ||||||| |
|
|
| T |
15859093 |
gggtggttttttaaaggggtttttgttcgagccggtgtttgtttggcaaccgatttccccttctttgttttttttttctccacccgagcttattagtgcg |
15859192 |
T |
|
| Q |
196 |
tcttgcacgggct--tcttggttaataattttttgccgtttcaaaaataaaa |
245 |
Q |
| |
|
|||||||||||| | ||| |||||||| |||||||| ||| |||| |||| |
|
|
| T |
15859193 |
ccttgcacgggcttgttttgattaataatattttgccgattctaaaaaaaaa |
15859244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 246
Target Start/End: Original strand, 34761167 - 34761306
Alignment:
| Q |
109 |
tttttaaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttgtgtttatttttt--ccatccgagcttgttagtgcatcttgcacgg |
205 |
Q |
| |
|
||||||||| ||||||||||||| |||||||| | || ||||||||||| ||| | | |||||||| ||| |||||||| ||||||| ||||||||| |
|
|
| T |
34761167 |
tttttaaggagtttttgttcgagtcggtgtttgtatgacaaccgatttcttcttctttgtatttttttcccacccgagcttattagtgctacttgcacgg |
34761266 |
T |
|
| Q |
206 |
gcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
|||| | | ||||||| | |||||||||||||||| ||||| |
|
|
| T |
34761267 |
gcttgtcgtttaataa-tatttgccgtttcaaaaaaaaaaa |
34761306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 33984753 - 33984814
Alignment:
| Q |
103 |
gggtggttttt-aaggggtttttgttcgagccggtgttt-tgtggcaaccgatttccccttg |
162 |
Q |
| |
|
||||||||||| ||||||||||||||||| || |||||| | |||||||||||||||||||| |
|
|
| T |
33984753 |
gggtggtttttgaaggggtttttgttcgaaccagtgtttgtatggcaaccgatttccccttg |
33984814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 12754465 - 12754422
Alignment:
| Q |
188 |
ttagtgcatcttgcacgggcttcttggttaataattttttgccg |
231 |
Q |
| |
|
||||||| ||||||||||| || ||||||||||||||||||||| |
|
|
| T |
12754465 |
ttagtgcgtcttgcacgggtttgttggttaataattttttgccg |
12754422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 11546693 - 11546739
Alignment:
| Q |
23 |
gcaggggtatgcttgcggattgtcatttgtatatgtctgcgtcatta |
69 |
Q |
| |
|
|||||||||| | || |||||||||| |||||||||||||||||||| |
|
|
| T |
11546693 |
gcaggggtattcatgaggattgtcatatgtatatgtctgcgtcatta |
11546739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0209 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0209
Description:
Target: scaffold0209; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 12947 - 12883
Alignment:
| Q |
182 |
agcttgttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaaaa |
246 |
Q |
| |
|
||||| ||||||| ||||| |||||||| |||| ||||||| |||||||||||||| || ||||| |
|
|
| T |
12947 |
agcttattagtgcttcttgtacgggcttgttggctaataatattttgccgtttcaacaaaaaaaa |
12883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0343 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0343
Description:
Target: scaffold0343; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 7956 - 8012
Alignment:
| Q |
188 |
ttagtgcatcttgcacgggcttcttggttaataattttttgccgtttcaaaaataaa |
244 |
Q |
| |
|
||||||||| ||||| ||||| |||||||||||| |||||||| || ||||||||| |
|
|
| T |
7956 |
ttagtgcattttgcataggcttgttggttaataatattttgccgatttaaaaataaa |
8012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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