View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7590_high_10 (Length: 401)
Name: NF7590_high_10
Description: NF7590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7590_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 12 - 329
Target Start/End: Original strand, 32082362 - 32082684
Alignment:
| Q |
12 |
acatcaaattcaatgaaatcaagaggaaaagaagaagcagcattaaaagacataatggagttttctttgatggctctcattctccgatccgtagattgta |
111 |
Q |
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| T |
32082362 |
acatcaaattcaatgaaatcaagaggaaaagaagaagcagcattaaaagacataatggagttttctttgatggctctcattctccgatccgtagattgta |
32082461 |
T |
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| Q |
112 |
agacattcataccgtttcctctatgtccaattacaacgaactttggcatctttaatccatcaccattcctcatctccaaacctgatcnnnnnnncaaaat |
211 |
Q |
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| T |
32082462 |
agacattcataccgtttcctctatgtccaattacaacgaactttggcatctttaatccatcaccattgctcatctccaaacctgatc-aaaaaacaaaat |
32082560 |
T |
|
| Q |
212 |
catatcatataaaaatattttatgttgcagttgcatgctgaggatacctgatacgtaataaataaaaagaatgtgcatggatg------aatgttaatgg |
305 |
Q |
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| T |
32082561 |
catatcaaataaagatattttacgttgcagttgcatgcagaggatacctgatacgtaataaataaaaagaatgtgcatggatgaatgttaatgttaatgg |
32082660 |
T |
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| Q |
306 |
aatggtacgtaccgctagaaaaac |
329 |
Q |
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| T |
32082661 |
tatggtacgtaccgctagaaaaac |
32082684 |
T |
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