View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7590_low_11 (Length: 411)

Name: NF7590_low_11
Description: NF7590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7590_low_11
NF7590_low_11
[»] chr5 (55 HSPs)
chr5 (1-217)||(36342721-36342938)
chr5 (227-320)||(7126051-7126145)
chr5 (285-396)||(993750-993860)
chr5 (288-395)||(14143903-14144011)
chr5 (227-320)||(14144051-14144145)
chr5 (285-395)||(23979166-23979278)
chr5 (224-319)||(24650831-24650926)
chr5 (286-381)||(41001370-41001465)
chr5 (341-395)||(14411698-14411751)
chr5 (341-395)||(17762284-17762337)
chr5 (285-391)||(27159222-27159327)
chr5 (227-319)||(20709346-20709439)
chr5 (343-396)||(41001678-41001730)
chr5 (217-320)||(993871-993974)
chr5 (285-395)||(24837170-24837282)
chr5 (341-395)||(24837493-24837546)
chr5 (233-320)||(4919130-4919218)
chr5 (227-283)||(6817256-6817312)
chr5 (343-395)||(24651025-24651076)
chr5 (344-395)||(7126244-7126294)
chr5 (285-395)||(24074304-24074416)
chr5 (285-395)||(31799641-31799753)
chr5 (341-395)||(6817124-6817177)
chr5 (341-395)||(17762606-17762659)
chr5 (341-395)||(18336780-18336832)
chr5 (217-294)||(24837293-24837370)
chr5 (343-392)||(31799965-31800013)
chr5 (233-320)||(17762432-17762520)
chr5 (234-294)||(31799781-31799841)
chr5 (227-291)||(41001487-41001551)
chr5 (242-289)||(18336638-18336685)
chr5 (343-382)||(29445131-29445170)
chr5 (345-395)||(4919317-4919366)
chr5 (341-391)||(7125923-7125972)
chr5 (341-395)||(18336468-18336521)
chr5 (285-330)||(4919058-4919103)
chr5 (285-330)||(7126182-7126227)
chr5 (217-289)||(14411847-14411920)
chr5 (227-283)||(24074490-24074546)
chr5 (287-330)||(6817388-6817431)
chr5 (285-391)||(14144166-14144274)
chr5 (248-283)||(24074561-24074596)
chr5 (347-394)||(24650704-24650750)
chr5 (345-395)||(4918990-4919039)
chr5 (341-395)||(30512289-30512342)
chr5 (341-395)||(30552629-30552682)
chr5 (285-330)||(994011-994056)
chr5 (341-382)||(22571090-22571131)
chr5 (285-330)||(24074567-24074612)
chr5 (341-382)||(29444819-29444860)
chr5 (253-289)||(4919068-4919104)
chr5 (253-289)||(7126181-7126217)
chr5 (249-289)||(14144161-14144201)
chr5 (249-289)||(27159068-27159108)
chr5 (249-289)||(31799718-31799758)
[»] chr4 (76 HSPs)
chr4 (227-320)||(37012841-37012935)
chr4 (227-395)||(48259824-48259995)
chr4 (227-294)||(7819191-7819258)
chr4 (227-320)||(9396849-9396943)
chr4 (227-320)||(18667439-18667533)
chr4 (341-395)||(31218305-31218358)
chr4 (227-320)||(38574102-38574196)
chr4 (285-393)||(38574233-38574343)
chr4 (241-320)||(9619129-9619209)
chr4 (285-393)||(3018014-3018125)
chr4 (287-395)||(37012974-37013083)
chr4 (285-395)||(46046431-46046537)
chr4 (227-294)||(46046558-46046625)
chr4 (341-384)||(46046748-46046791)
chr4 (341-395)||(9619303-9619356)
chr4 (287-382)||(31943962-31944061)
chr4 (341-395)||(41946966-41947019)
chr4 (343-396)||(9516610-9516662)
chr4 (217-294)||(9516734-9516811)
chr4 (217-294)||(31944127-31944204)
chr4 (285-382)||(15640729-15640828)
chr4 (227-294)||(3018189-3018256)
chr4 (227-294)||(4356058-4356125)
chr4 (285-395)||(26252502-26252614)
chr4 (227-294)||(34064116-34064183)
chr4 (341-396)||(35376163-35376217)
chr4 (341-395)||(9397022-9397075)
chr4 (285-382)||(9618993-9619093)
chr4 (227-320)||(18713110-18713204)
chr4 (233-303)||(31090201-31090271)
chr4 (285-395)||(3273622-3273735)
chr4 (217-289)||(26252418-26252491)
chr4 (285-395)||(38573970-38574081)
chr4 (339-395)||(3273941-3273995)
chr4 (343-395)||(41947180-41947231)
chr4 (347-391)||(48580196-48580239)
chr4 (344-395)||(9516937-9516987)
chr4 (285-395)||(13132206-13132316)
chr4 (341-396)||(34063982-34064036)
chr4 (227-282)||(48580000-48580055)
chr4 (341-395)||(31090385-31090438)
chr4 (341-382)||(3018334-3018375)
chr4 (344-393)||(9396702-9396750)
chr4 (347-396)||(15641046-15641094)
chr4 (285-330)||(31090129-31090174)
chr4 (341-382)||(35376451-35376492)
chr4 (233-320)||(15640865-15640953)
chr4 (347-391)||(18667620-18667663)
chr4 (344-383)||(7819347-7819386)
chr4 (339-382)||(12520650-12520693)
chr4 (344-395)||(31944277-31944327)
chr4 (341-395)||(12904748-12904801)
chr4 (348-382)||(31083428-31083462)
chr4 (341-395)||(31090061-31090114)
chr4 (341-391)||(36887685-36887734)
chr4 (344-393)||(7819018-7819066)
chr4 (285-330)||(9516678-9516723)
chr4 (252-289)||(13132204-13132241)
chr4 (285-330)||(18713028-18713073)
chr4 (341-382)||(20069622-20069663)
chr4 (285-330)||(37012775-37012820)
chr4 (341-382)||(43313535-43313576)
chr4 (285-330)||(48580131-48580176)
chr4 (341-382)||(51029097-51029138)
chr4 (253-289)||(3018090-3018126)
chr4 (253-289)||(3273700-3273736)
chr4 (347-391)||(4356210-4356253)
chr4 (286-330)||(9619245-9619289)
chr4 (341-393)||(13131943-13131994)
chr4 (285-329)||(26252337-26252381)
chr4 (253-289)||(31090139-31090175)
chr4 (249-289)||(37012785-37012825)
chr4 (253-289)||(38574046-38574082)
chr4 (253-289)||(38574232-38574268)
chr4 (341-377)||(43312227-43312263)
chr4 (341-373)||(53896468-53896500)
[»] chr1 (63 HSPs)
chr1 (224-320)||(17606458-17606555)
chr1 (285-395)||(18462287-18462398)
chr1 (227-318)||(42510148-42510240)
chr1 (285-391)||(17606573-17606679)
chr1 (285-395)||(39711337-39711449)
chr1 (227-294)||(39826184-39826251)
chr1 (341-395)||(18342341-18342394)
chr1 (341-391)||(33629014-33629063)
chr1 (227-320)||(48072111-48072205)
chr1 (342-395)||(33628691-33628743)
chr1 (233-294)||(33628830-33628891)
chr1 (233-294)||(39711249-39711310)
chr1 (341-393)||(17606307-17606358)
chr1 (240-320)||(29696714-29696794)
chr1 (285-395)||(4906963-4907075)
chr1 (344-395)||(29696566-29696616)
chr1 (224-283)||(39970777-39970836)
chr1 (227-294)||(52058145-52058212)
chr1 (341-395)||(20995699-20995752)
chr1 (341-395)||(39826370-39826423)
chr1 (285-395)||(24467630-24467741)
chr1 (285-395)||(34749139-34749250)
chr1 (285-395)||(39711075-39711185)
chr1 (217-320)||(13229882-13229985)
chr1 (227-283)||(30299419-30299475)
chr1 (248-283)||(16294206-16294241)
chr1 (344-383)||(17500781-17500820)
chr1 (339-382)||(17502051-17502094)
chr1 (233-288)||(34749277-34749332)
chr1 (339-382)||(37236731-37236774)
chr1 (343-382)||(42510341-42510380)
chr1 (227-294)||(43539524-43539591)
chr1 (285-382)||(4907227-4907327)
chr1 (341-395)||(8292805-8292858)
chr1 (227-320)||(20995819-20995912)
chr1 (341-395)||(39970970-39971023)
chr1 (285-376)||(42510034-42510127)
chr1 (345-395)||(52058012-52058061)
chr1 (345-395)||(52058336-52058385)
chr1 (285-395)||(8293072-8293185)
chr1 (227-315)||(24467783-24467871)
chr1 (345-382)||(43539675-43539712)
chr1 (343-391)||(27039643-27039690)
chr1 (285-395)||(30252163-30252277)
chr1 (343-395)||(30299233-30299284)
chr1 (343-395)||(34749431-34749482)
chr1 (343-395)||(48072287-48072338)
chr1 (227-294)||(7473926-7473993)
chr1 (344-395)||(13230059-13230109)
chr1 (217-315)||(18462440-18462538)
chr1 (345-392)||(18462612-18462658)
chr1 (344-395)||(29696884-29696934)
chr1 (287-330)||(30299299-30299342)
chr1 (249-283)||(20995928-20995962)
chr1 (285-395)||(24467892-24468001)
chr1 (341-395)||(39826051-39826104)
chr1 (285-330)||(17606376-17606421)
chr1 (285-391)||(20995933-20996040)
chr1 (253-289)||(4907040-4907076)
chr1 (253-289)||(8293071-8293107)
chr1 (253-289)||(34749215-34749251)
chr1 (253-289)||(39711336-39711372)
chr1 (286-330)||(39826312-39826356)
[»] chr6 (36 HSPs)
chr6 (217-320)||(26385402-26385506)
chr6 (227-320)||(30618112-30618205)
chr6 (285-395)||(32017769-32017880)
chr6 (285-395)||(9481183-9481295)
chr6 (341-395)||(24731936-24731989)
chr6 (285-395)||(18500316-18500427)
chr6 (246-320)||(3230016-3230091)
chr6 (341-382)||(10321746-10321787)
chr6 (217-294)||(24732115-24732192)
chr6 (217-294)||(33714611-33714688)
chr6 (343-395)||(18500655-18500706)
chr6 (341-393)||(26385598-26385649)
chr6 (227-288)||(32017670-32017731)
chr6 (253-320)||(17142798-17142866)
chr6 (217-304)||(18500438-18500526)
chr6 (343-395)||(26385279-26385330)
chr6 (285-395)||(30617968-30618075)
chr6 (347-382)||(33714496-33714531)
chr6 (341-383)||(2299352-2299394)
chr6 (345-395)||(2299641-2299690)
chr6 (343-396)||(19284129-19284181)
chr6 (341-382)||(21069527-21069568)
chr6 (354-395)||(24732274-24732314)
chr6 (234-294)||(2299451-2299511)
chr6 (343-383)||(34113591-34113631)
chr6 (227-289)||(33637709-33637772)
chr6 (344-382)||(9854212-9854250)
chr6 (285-330)||(9854152-9854197)
chr6 (285-330)||(19284197-19284242)
chr6 (285-330)||(24732203-24732248)
chr6 (285-330)||(26385346-26385391)
chr6 (345-382)||(30458913-30458950)
chr6 (285-330)||(33714555-33714600)
chr6 (339-383)||(15942459-15942503)
chr6 (253-289)||(18500392-18500428)
chr6 (253-289)||(32017768-32017804)
[»] chr8 (53 HSPs)
chr8 (285-395)||(10108371-10108483)
chr8 (285-395)||(14820296-14820407)
chr8 (227-294)||(10108547-10108614)
chr8 (341-395)||(5554870-5554923)
chr8 (235-320)||(17623029-17623115)
chr8 (341-395)||(43851666-43851719)
chr8 (233-294)||(22494561-22494622)
chr8 (343-395)||(18044153-18044204)
chr8 (285-391)||(10108635-10108743)
chr8 (285-391)||(14820559-14820667)
chr8 (227-294)||(43851798-43851865)
chr8 (227-320)||(2583470-2583564)
chr8 (341-395)||(10171467-10171520)
chr8 (341-391)||(21147941-21147990)
chr8 (227-320)||(42113118-42113212)
chr8 (224-320)||(30789638-30789735)
chr8 (343-395)||(7689849-7689900)
chr8 (217-320)||(26136835-26136939)
chr8 (227-294)||(7689700-7689767)
chr8 (242-320)||(14767656-14767735)
chr8 (224-294)||(5555046-5555116)
chr8 (285-382)||(5555134-5555234)
chr8 (341-395)||(21148260-21148313)
chr8 (341-395)||(30789831-30789884)
chr8 (341-382)||(30789521-30789562)
chr8 (341-382)||(42112998-42113039)
chr8 (241-294)||(42605930-42605983)
chr8 (343-395)||(7689525-7689576)
chr8 (339-391)||(20877067-20877118)
chr8 (242-320)||(21148086-21148164)
chr8 (344-395)||(42606080-42606130)
chr8 (344-395)||(43481642-43481692)
chr8 (341-395)||(17622891-17622944)
chr8 (341-391)||(26136690-26136739)
chr8 (341-395)||(35367411-35367464)
chr8 (339-384)||(38726698-38726743)
chr8 (249-289)||(5555129-5555169)
chr8 (249-289)||(10108630-10108670)
chr8 (249-289)||(14820554-14820594)
chr8 (286-329)||(22494454-22494497)
chr8 (340-395)||(26137007-26137061)
chr8 (339-377)||(21144827-21144865)
chr8 (345-395)||(42113309-42113358)
chr8 (285-330)||(21148005-21148050)
chr8 (341-382)||(40486642-40486683)
chr8 (341-382)||(40487738-40487779)
chr8 (253-289)||(10108448-10108484)
chr8 (253-289)||(14820372-14820408)
chr8 (345-393)||(17623214-17623261)
chr8 (249-289)||(21148015-21148055)
chr8 (285-329)||(26136950-26136994)
chr8 (286-330)||(30789773-30789817)
chr8 (285-329)||(42605822-42605866)
[»] chr7 (62 HSPs)
chr7 (285-395)||(20419537-20419649)
chr7 (217-319)||(23704812-23704915)
chr7 (227-320)||(20963629-20963723)
chr7 (217-294)||(20419660-20419737)
chr7 (285-395)||(23704926-23705037)
chr7 (286-395)||(20963760-20963870)
chr7 (217-301)||(44816959-44817043)
chr7 (285-395)||(28218428-28218540)
chr7 (285-395)||(41600223-41600335)
chr7 (341-395)||(28218179-28218232)
chr7 (227-320)||(31851373-31851467)
chr7 (285-395)||(38879989-38880098)
chr7 (217-294)||(20458815-20458892)
chr7 (227-294)||(41600092-41600159)
chr7 (344-398)||(44816829-44816884)
chr7 (341-395)||(12006542-12006595)
chr7 (341-395)||(20419861-20419914)
chr7 (347-395)||(23704663-23704710)
chr7 (227-294)||(12006674-12006741)
chr7 (248-330)||(24194931-24195014)
chr7 (341-383)||(6465867-6465909)
chr7 (284-395)||(16995201-16995313)
chr7 (341-383)||(20458704-20458746)
chr7 (217-283)||(25772487-25772553)
chr7 (341-395)||(48672603-48672656)
chr7 (285-395)||(23383500-23383613)
chr7 (217-294)||(23383624-23383701)
chr7 (285-395)||(38879724-38879837)
chr7 (343-395)||(24195198-24195249)
chr7 (217-320)||(38879848-38879952)
chr7 (343-395)||(41599959-41600010)
chr7 (344-395)||(7658292-7658342)
chr7 (227-294)||(10409551-10409618)
chr7 (285-395)||(12006805-12006917)
chr7 (341-384)||(14646974-14647017)
chr7 (285-395)||(23383765-23383877)
chr7 (344-395)||(48672278-48672328)
chr7 (227-294)||(48672413-48672480)
chr7 (341-395)||(10409697-10409750)
chr7 (349-395)||(20459022-20459067)
chr7 (345-395)||(25772365-25772414)
chr7 (227-301)||(33162705-33162779)
chr7 (227-289)||(48648395-48648457)
chr7 (248-320)||(6466004-6466077)
chr7 (341-393)||(7657972-7658023)
chr7 (253-320)||(28218323-28218391)
chr7 (343-395)||(33162862-33162913)
chr7 (344-391)||(31852157-31852203)
chr7 (227-320)||(1250340-1250434)
chr7 (344-382)||(1250533-1250571)
chr7 (341-395)||(25772655-25772708)
chr7 (287-329)||(31851506-31851548)
chr7 (285-330)||(1250471-1250516)
chr7 (341-382)||(20963507-20963548)
chr7 (285-330)||(20963563-20963608)
chr7 (341-382)||(23258248-23258289)
chr7 (285-330)||(24195061-24195106)
chr7 (285-330)||(28218247-28218292)
chr7 (253-289)||(23704925-23704961)
chr7 (341-377)||(33131651-33131687)
chr7 (253-289)||(38879802-38879838)
chr7 (343-395)||(48648263-48648314)
[»] chr3 (80 HSPs)
chr3 (285-395)||(9266976-9267088)
chr3 (341-395)||(14171910-14171963)
chr3 (227-301)||(14262170-14262244)
chr3 (341-395)||(14262360-14262413)
chr3 (217-283)||(17465492-17465558)
chr3 (217-294)||(9267099-9267176)
chr3 (224-320)||(14162021-14162118)
chr3 (285-395)||(30500306-30500417)
chr3 (227-319)||(47575406-47575499)
chr3 (217-294)||(49986705-49986782)
chr3 (285-395)||(5800606-5800718)
chr3 (344-395)||(16721992-16722042)
chr3 (285-395)||(16722256-16722368)
chr3 (285-391)||(30500048-30500154)
chr3 (285-395)||(35995679-35995791)
chr3 (242-320)||(43572541-43572620)
chr3 (341-391)||(14162194-14162243)
chr3 (341-395)||(19112765-19112818)
chr3 (341-395)||(19720334-19720387)
chr3 (227-320)||(21633046-21633140)
chr3 (341-395)||(27946189-27946242)
chr3 (341-395)||(45969916-45969969)
chr3 (227-292)||(4204842-4204907)
chr3 (224-320)||(5800755-5800852)
chr3 (217-294)||(19112889-19112966)
chr3 (227-319)||(30500175-30500268)
chr3 (217-294)||(35995802-35995879)
chr3 (217-294)||(45003673-45003750)
chr3 (227-291)||(16722171-16722235)
chr3 (227-283)||(38283738-38283794)
chr3 (233-320)||(45970065-45970153)
chr3 (285-395)||(14161872-14161984)
chr3 (227-294)||(14171720-14171787)
chr3 (343-382)||(14262049-14262088)
chr3 (242-320)||(15328610-15328689)
chr3 (285-381)||(45003761-45003859)
chr3 (344-395)||(49986528-49986578)
chr3 (341-395)||(9267298-9267351)
chr3 (341-395)||(11003733-11003786)
chr3 (341-395)||(19113089-19113142)
chr3 (341-391)||(27946114-27946163)
chr3 (341-395)||(35995999-35996052)
chr3 (341-395)||(45970240-45970293)
chr3 (227-292)||(52552826-52552891)
chr3 (347-395)||(20853696-20853743)
chr3 (227-283)||(20853830-20853886)
chr3 (242-294)||(33372583-33372635)
chr3 (342-382)||(35740830-35740870)
chr3 (285-391)||(5800870-5800977)
chr3 (285-379)||(21633161-21633258)
chr3 (285-395)||(43572390-43572502)
chr3 (341-383)||(24490243-24490285)
chr3 (345-395)||(33372407-33372456)
chr3 (345-395)||(49986856-49986905)
chr3 (342-375)||(3425973-3426006)
chr3 (341-382)||(35741908-35741949)
chr3 (341-382)||(36990983-36991024)
chr3 (341-382)||(37016423-37016464)
chr3 (347-395)||(14171588-14171635)
chr3 (249-289)||(16722251-16722291)
chr3 (345-393)||(17649337-17649384)
chr3 (343-395)||(20854021-20854072)
chr3 (249-289)||(30500119-30500159)
chr3 (339-395)||(45003497-45003552)
chr3 (285-396)||(52552953-52553066)
chr3 (356-395)||(21632902-21632940)
chr3 (343-382)||(38283563-38283602)
chr3 (341-391)||(3424779-3424828)
chr3 (249-283)||(5800865-5800899)
chr3 (345-395)||(33372732-33372781)
chr3 (260-320)||(11003882-11003943)
chr3 (285-330)||(14262104-14262149)
chr3 (285-330)||(19112833-19112878)
chr3 (285-330)||(20853764-20853809)
chr3 (285-330)||(20853961-20854006)
chr3 (253-289)||(9267053-9267089)
chr3 (253-289)||(14161949-14161985)
chr3 (249-289)||(14262114-14262154)
chr3 (347-395)||(17465697-17465744)
chr3 (249-281)||(19112851-19112883)
[»] chr2 (66 HSPs)
chr2 (227-320)||(22263325-22263419)
chr2 (217-289)||(26236277-26236349)
chr2 (285-395)||(23806217-23806329)
chr2 (224-294)||(15106244-15106314)
chr2 (227-320)||(23854800-23854894)
chr2 (285-391)||(19251476-19251583)
chr2 (224-320)||(23806102-23806199)
chr2 (285-395)||(26236360-26236471)
chr2 (339-395)||(17850588-17850643)
chr2 (145-217)||(33456426-33456498)
chr2 (285-395)||(17463356-17463468)
chr2 (227-294)||(19251647-19251714)
chr2 (227-320)||(26560688-26560782)
chr2 (217-294)||(26135994-26136071)
chr2 (217-289)||(30390583-30390655)
chr2 (339-382)||(12419044-12419087)
chr2 (339-382)||(12431104-12431147)
chr2 (344-395)||(17850913-17850963)
chr2 (344-395)||(22263520-22263570)
chr2 (289-391)||(23854693-23854797)
chr2 (348-395)||(23855025-23855071)
chr2 (242-320)||(39878252-39878331)
chr2 (235-294)||(42670861-42670920)
chr2 (344-382)||(13254763-13254801)
chr2 (341-395)||(19251793-19251846)
chr2 (285-382)||(26560569-26560667)
chr2 (341-391)||(42670722-42670771)
chr2 (341-382)||(26135830-26135871)
chr2 (342-395)||(26560880-26560932)
chr2 (222-294)||(13284537-13284609)
chr2 (285-382)||(22263205-22263304)
chr2 (285-395)||(15106332-15106442)
chr2 (227-294)||(20498922-20498989)
chr2 (343-382)||(30959997-30960036)
chr2 (341-384)||(39878113-39878156)
chr2 (344-382)||(17463105-17463143)
chr2 (227-320)||(17463241-17463335)
chr2 (341-395)||(20498748-20498801)
chr2 (341-395)||(26236128-26236181)
chr2 (341-383)||(33290061-33290103)
chr2 (341-395)||(42671043-42671096)
chr2 (341-382)||(13284737-13284778)
chr2 (341-382)||(30958697-30958738)
chr2 (225-294)||(33290226-33290295)
chr2 (249-289)||(22263269-22263309)
chr2 (339-395)||(23046708-23046763)
chr2 (343-395)||(26136143-26136194)
chr2 (285-329)||(30390528-30390572)
chr2 (348-395)||(23047913-23047959)
chr2 (248-283)||(33290133-33290168)
chr2 (348-395)||(44097739-44097786)
chr2 (341-395)||(15106068-15106121)
chr2 (285-327)||(22263456-22263498)
chr2 (341-395)||(34548575-34548628)
chr2 (341-395)||(39878397-39878449)
chr2 (249-283)||(42670803-42670837)
chr2 (346-391)||(13284417-13284461)
chr2 (285-330)||(17850851-17850896)
chr2 (341-382)||(30390472-30390513)
chr2 (341-382)||(33290371-33290412)
chr2 (253-289)||(19251548-19251584)
chr2 (253-289)||(22263455-22263491)
chr2 (253-289)||(23806216-23806252)
chr2 (249-289)||(26560632-26560672)
chr2 (253-289)||(30390537-30390573)
chr2 (285-329)||(42670788-42670832)
[»] scaffold0117 (1 HSPs)
scaffold0117 (286-391)||(12248-12355)
[»] scaffold0361 (3 HSPs)
scaffold0361 (217-294)||(4740-4817)
scaffold0361 (285-395)||(4828-4939)
scaffold0361 (341-395)||(4563-4616)
[»] scaffold0449 (2 HSPs)
scaffold0449 (341-395)||(7524-7577)
scaffold0449 (285-395)||(7227-7339)
[»] scaffold0185 (2 HSPs)
scaffold0185 (341-395)||(3870-3923)
scaffold0185 (227-294)||(4003-4070)
[»] scaffold0141 (2 HSPs)
scaffold0141 (342-395)||(8326-8378)
scaffold0141 (341-395)||(8646-8699)
[»] scaffold0809 (2 HSPs)
scaffold0809 (339-395)||(1728-1783)
scaffold0809 (227-294)||(1587-1654)
[»] scaffold0881 (1 HSPs)
scaffold0881 (233-294)||(360-421)
[»] scaffold0477 (3 HSPs)
scaffold0477 (343-395)||(4881-4932)
scaffold0477 (217-283)||(4935-5002)
scaffold0477 (285-382)||(5013-5112)
[»] scaffold0352 (3 HSPs)
scaffold0352 (339-395)||(4668-4723)
scaffold0352 (341-395)||(6003-6056)
scaffold0352 (252-289)||(4745-4782)
[»] scaffold0176 (1 HSPs)
scaffold0176 (344-395)||(15955-16005)
[»] scaffold0157 (1 HSPs)
scaffold0157 (339-382)||(224-267)


Alignment Details
Target: chr5 (Bit Score: 146; Significance: 9e-77; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 36342721 - 36342938
Alignment:
Q  1 aagaacacattaatgaaaattttgagtacattagttaattataagaaacagatcatattatgataagaattagataaagccnnnnnnnnnnnn-ctataa 99  Q
    |||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||| |             ||||||    
T  36342721 aagatcacattaattaaaattttgagtacattagttcattataagaaacagaacatattatgataaaaattagataaagacataaaaaaaaaaactataa 36342820  T
Q  100 tattgaacaaataattgaaactcaagtgttcgaacacccttaatcccgcctgaagattcacttgcttgggtttgtgattatcatgaaggagatattcgcg 199  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36342821 tattgaacaaataattgaaactcaagtgttagaacacccttaatcccgcctgaagattcacttgcttgggtttgtgattatcatgaaggagatattcgcg 36342920  T
Q  200 tttcaatggatgattgga 217  Q
    ||||||||||||||||||    
T  36342921 tttcaatggatgattgga 36342938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 7126051 - 7126145
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| | ||| ||||||| ||||||||||||    
T  7126051 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatatgaaattacagggac 7126145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 396
Target Start/End: Complemental strand, 993860 - 993750
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaaaaag 384  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||         | ||||||||||||||||||||||||||||||||| |||| |||||    
T  993860 gggaccaaaagtggaagaatatgaaattacaaggactaaatctaatttttttttacagggactaaaaccggaattcgctaatattacagagacg-aaaag 993762  T
Q  385 aggtatttacct 396  Q
    | ||||||||||    
T  993761 aagtatttacct 993750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 288 - 395
Target Start/End: Complemental strand, 14144011 - 14143903
Alignment:
Q  288 accaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaaaga 385  Q
    ||||||| |||||||||||| |||||||||||| |||||||||         ||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  14144011 accaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagggacg-aaaaga 14143913  T
Q  386 ggtatttacc 395  Q
    ||||||||||    
T  14143912 ggtatttacc 14143903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 14144145 - 14144051
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatggaa-gaatatggaattacagggac 320  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||||||  ||||||||| ||||| |||| || ||||||||||||    
T  14144145 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacatggaccaaaagtggaaggaatctgaaattacagggac 14144051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 23979166 - 23979278
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||         |   |||||||||||||||||||||||||||||||||||||| ||    
T  23979166 gggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacg-aa 23979264  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  23979265 aagaggtatttacc 23979278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 319
Target Start/End: Original strand, 24650831 - 24650926
Alignment:
Q  224 caaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatggaagaatatggaattacaggga 319  Q
    |||||||| ||||||| ||||||||||| ||||||||||| ||||||||| ||||||||| |||||||||   |||  |||||| |||||||||||    
T  24650831 caaaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaattacagggaccaaagtgggagaaatatgaaattacaggga 24650926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 381
Target Start/End: Complemental strand, 41001465 - 41001370
Alignment:
Q  286 ggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||         | |||||||||||||| ||||||||||||||||||||||||||    
T  41001465 ggaccaaaagtggaagaatatgaaattacagggacaaaatctaatttttttttacagggactaaaaccgaaattcgctaatattacagggacgaaa 41001370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 14411751 - 14411698
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14411751 agggactaaaaccggaattcgctaatattacagggacg-aaaagaggtatttacc 14411698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 17762337 - 17762284
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17762337 agggactaaaaccggaattcgctaatattacagggac-aaaaagaggtatttacc 17762284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 27159222 - 27159327
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaaaaag 384  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||        | | |||||||||||| ||||||||||||||||| ||||| |||||    
T  27159222 gggaccaaaaatggaagaatataaaattacagggacaaaatctaaattttttttacaaggactaaaaccgaaattcgctaatattacaaggacg-aaaag 27159320  T
Q  385 aggtatt 391  Q
    |||||||    
T  27159321 aggtatt 27159327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 20709346 - 20709439
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacaggga 319  Q
    ||||| ||||||| ||||||||||| |||||| |||||||||||||||||||||||| |||| ||||| | ||| |||| || |||||||||||    
T  20709346 aatctgcatacatggcacgtaaaatgagggacaaaaagtggaggaatatgaaattacagggatcaaaagtgggaggaatctgaaattacaggga 20709439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 343 - 396
Target Start/End: Original strand, 41001678 - 41001730
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacct 396  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41001678 ggactaaaaccggaattcgctaatattacagggacgaaaaa-aggtatttacct 41001730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 993871 - 993974
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattaca 315  Q
    |||||| || ||||| |||||||  |||||||||| |||||||||||||||||||||||| |||||| |||||||||| | ||| |||| || |||||||    
T  993871 acgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatg-aattacagggaccaaaagtgggaggaatctgaaattaca 993969  T
Q  316 gggac 320  Q
    |||||    
T  993970 gggac 993974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 24837282 - 24837170
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||||         |   |||||||||||||||||||||||| ||||||||||||| ||    
T  24837282 gggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctattattacagggacg-aa 24837184  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  24837183 aagaggtatttacc 24837170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 24837493 - 24837546
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  24837493 agggactaaaactggaattcgctaatattacagggacg-aaaagaggtatttacc 24837546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 320
Target Start/End: Original strand, 4919130 - 4919218
Alignment:
Q  233 catacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa-atggaagaatatggaattacagggac 320  Q
    ||||||| | ||||||||| ||||||||||||||||||||| ||||||||| | ||||||||  |||| ||||||| ||||||| ||||    
T  4919130 catacatggtacgtaaaatgagggaccaaaagtggaggaatttgaaattacagtgaccaaaagttggaggaatatgaaattacaaggac 4919218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 6817256 - 6817312
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattac 283  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||||    
T  6817256 aatctgcatacatggcacgtaaaataagggaccaaaaatggaggaatctgaaattac 6817312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 24651025 - 24651076
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  24651025 ggactaaaaccggaattcgctaatattacagagacg-aaaagaggtatttacc 24651076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 7126244 - 7126294
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  7126244 gactaaaaccggaattcgctaatattacagggatg-aaaagaggtatttacc 7126294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 24074416 - 24074304
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||||| ||| |||||||||         |   |||||||||||||| ||||||||||||||||| ||||| ||    
T  24074416 gggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatatttttttttacagggactaaaaccgaaattcgctaatattacatggacg-aa 24074318  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  24074317 aagaggtatttacc 24074304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 31799753 - 31799641
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||         |   ||||||| |||||||||||||||||||||| ||||||| ||    
T  31799753 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactgaaaccggaattcgctaatattatagggacg-aa 31799655  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  31799654 aagaggtatttacc 31799641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 6817177 - 6817124
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  6817177 agggactaaaaccggaattcactaatattacaaggacg-aaaagaggtatttacc 6817124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 17762606 - 17762659
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  17762606 agggactaaaaccagaattcgctaatactacagggacg-aaaagaggtatttacc 17762659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 18336780 - 18336832
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  18336780 agggactaaaaccggaattcgctaat-ttacagggacg-aaaagaggtatttacc 18336832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 24837293 - 24837370
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || |||||  |||||| | ||||||||| ||||| ||||||||||||||| ||||||||| ||||||||||    
T  24837293 acgtaagcagaatctgtatacatggtacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaa 24837370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 392
Target Start/End: Original strand, 31799965 - 31800013
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtattt 392  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  31799965 ggactaaaaccggaattcgctaatattatagggacg-aaaagaggtattt 31800013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 320
Target Start/End: Complemental strand, 17762520 - 17762432
Alignment:
Q  233 catacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa-atggaagaatatggaattacagggac 320  Q
    ||||||| | || |||||| ||||||||||||||||||||| | ||||||| ||||||||||   ||| ||||||| ||||||||||||    
T  17762520 catacatgggacataaaatgagggaccaaaagtggaggaatctaaaattacagggaccaaaagcgggaggaatatgaaattacagggac 17762432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 31799781 - 31799841
Alignment:
Q  234 atacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| ||| ||||||| ||||||||||||||||||| | ||||||||| ||||||||||    
T  31799781 atacatggcatgtaaaatgagggaccaaaagtggaggattttgaaattacagggaccaaaa 31799841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 41001487 - 41001551
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggacca 291  Q
    ||||| ||||||| ||||||||||| |||||| |||| ||||||||| ||||||||| |||||||    
T  41001487 aatctgcatacatggcacgtaaaatgagggactaaaaatggaggaatctgaaattacagggacca 41001551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 18336685 - 18336638
Alignment:
Q  242 cacgtaaaataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  18336685 cacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac 18336638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 29445131 - 29445170
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  29445131 ggactaaaactggaattcgctaatattacagggacgaaaa 29445170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 395
Target Start/End: Original strand, 4919317 - 4919366
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||||    
T  4919317 actaaaaccggaattcgctaatattccagagacg-aaaagaggtatttacc 4919366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 7125972 - 7125923
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  7125972 agggactaaaatcggaattcgctaatattacaggaacg-aaaagaggtatt 7125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 18336521 - 18336468
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||||| ||||||||    
T  18336521 agggactaaaatcggaattcgctaatattatagggacg-aaaagagatatttacc 18336468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 4919103 - 4919058
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||    
T  4919103 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaa 4919058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 7126182 - 7126227
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||    
T  7126182 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaa 7126227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 14411920 - 14411847
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagt-ggaggaatatgaaattactgggac 289  Q
    |||||| || ||||| |||||||  |||||||||| ||||||||||||| |||||||| ||||||||| |||||    
T  14411920 acgtaagcagaatctacatacatgacacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 14411847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 24074546 - 24074490
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattac 283  Q
    ||||| |||| || ||||||||||| ||||||||||||||||| ||| |||||||||    
T  24074546 aatctgcatatatggcacgtaaaatgagggaccaaaagtggagaaatttgaaattac 24074490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 330
Target Start/End: Original strand, 6817388 - 6817431
Alignment:
Q  287 gaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||| |||||||||||| |||||||||||| |||||||||    
T  6817388 gaccaaaagtggaagaatatgaaattacagggacaaaatctaaa 6817431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 14144166 - 14144274
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||         |   ||||||||||| ||||||||| ||||||||||| |||| ||    
T  14144166 gggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgttaatattacagtgacg-aa 14144264  T
Q  382 aagaggtatt 391  Q
    ||||||||||    
T  14144265 aagaggtatt 14144274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 24074561 - 24074596
Alignment:
Q  248 aaataagggaccaaaagtggaggaatatgaaattac 283  Q
    ||||||||||||||||||||| ||||||||||||||    
T  24074561 aaataagggaccaaaagtggaagaatatgaaattac 24074596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 394
Target Start/End: Complemental strand, 24650750 - 24650704
Alignment:
Q  347 taaaaccggaattcgctaatattacagggacgaaaaagaggtatttac 394  Q
    |||||||| |||||| |||||||||||||||| |||||||||||||||    
T  24650750 taaaaccgaaattcgttaatattacagggacg-aaaagaggtatttac 24650704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 395
Target Start/End: Complemental strand, 4919039 - 4918990
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||| |||||||||||||||||| || | ||||||||||||||||    
T  4919039 actaaaaccgaaattcgctaatattacagagatg-aaaagaggtatttacc 4918990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 30512342 - 30512289
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||| ||||||||    
T  30512342 agggactaaaaccaaaattcactaatattacagggacg-aaaagagatatttacc 30512289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 30552682 - 30552629
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||  ||||| ||||||||||||||||| ||||||| ||||||||    
T  30552682 agggactaaaaccaaaattcactaatattacagggacg-aaaagagatatttacc 30552629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 994011 - 994056
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||    
T  994011 gggaccaaaagtggaagaatctgcaattacagggacaaaatctaaa 994056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 22571131 - 22571090
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||| |||||||||||||||||||| |||| ||||    
T  22571131 agggactaaaatcggaattcgctaatattacaaggacaaaaa 22571090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 24074567 - 24074612
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||||    
T  24074567 gggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaa 24074612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 29444860 - 29444819
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||| | ||||||| ||||||||||||||||||||    
T  29444860 agggactaaaatcagaattcgttaatattacagggacgaaaa 29444819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 4919104 - 4919068
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  4919104 agggaccaaaagtggaagaatatgaaattacagggac 4919068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 7126181 - 7126217
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  7126181 agggaccaaaagtggaagaatatgaaattacagggac 7126217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 14144161 - 14144201
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||| ||||||||| |||||    
T  14144161 aataagggaccaaaagtggaagaatttgaaattacagggac 14144201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 27159108 - 27159068
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||| ||||||||| |||||    
T  27159108 aataagggaccaaaagtggaagaatctgaaattacagggac 27159068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 31799758 - 31799718
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||| ||||||||| |||||    
T  31799758 aataagggaccaaaagtggaagaatctgaaattacagggac 31799718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 37012841 - 37012935
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||||||  ||||||||| | ||||||||||| ||||||||||||    
T  37012841 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacaaggaccaaaagtaggaagaatatgaaattacagggac 37012935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 395
Target Start/End: Complemental strand, 48259995 - 48259824
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggactaaat 325  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||||||| |||||| || |||||||||| | ||| |||| || ||||||| |||| ||||    
T  48259995 aatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaataacagggaccaaaagtaggaggaatctgaaattacatggacaaaat 48259896  T
Q  326 ctaaa---nnnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||           | ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  48259895 ctaaatctttttatttacagggattaaaaccggaattcgctaatattacagggacg-aaaagagatatttacc 48259824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 7819258 - 7819191
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||  |||||||||    
T  7819258 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacatggaccaaaa 7819191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 9396943 - 9396849
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| |||||||  |||||||||| ||||||||||||||||||||||||||||||| |||| ||||| | ||| |||| || ||||||||||||    
T  9396943 aatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggatcaaaagtgggaggaatctgaaattacagggac 9396849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 18667533 - 18667439
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa-atggaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||| | ||||||| ||||||||||  |||| |||| || ||||||||||||    
T  18667533 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttaaaattacagggaccaaaagttggaggaatctgaaattacagggac 18667439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 31218305 - 31218358
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31218305 agggactaaaaccggaattcgctaatattacagggacg-aaaagaggtatttacc 31218358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 38574102 - 38574196
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||| ||||||| ||||||||||||||||||||||||||||||| | |||||||| | ||| |||| || ||||||||||||    
T  38574102 aatctgcatacatggcatgtaaaatgagggaccaaaagtggaggaatatgaaattacagagaccaaaagtgggaggaatctgaaattacagggac 38574196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 38574233 - 38574343
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         |   ||||||||||||| |||||||||||||||||||||||||||    
T  38574233 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccagaattcgctaatattacagggacgaaa 38574332  T
Q  382 aagaggtattta 393  Q
    || |||||||||    
T  38574333 aa-aggtattta 38574343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 241 - 320
Target Start/End: Complemental strand, 9619209 - 9619129
Alignment:
Q  241 gcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||||||||  ||||| ||||||||||||||| ||||||||| |||||||||||| ||| ||||||| ||||||||||||    
T  9619209 gcacgtaaaaagagggagcaaaagtggaggaatctgaaattacagggaccaaaaatgggaggaatatgaaattacagggac 9619129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 3018125 - 3018014
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa----nnnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaa 380  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||            |  ||||||||||||||||||||||||||||||||||||| |    
T  3018125 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttaccgggactaaaaccggaattcgctaatattacagggacg-a 3018027  T
Q  381 aaagaggtattta 393  Q
    |||||||||||||    
T  3018026 aaagaggtattta 3018014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 287 - 395
Target Start/End: Original strand, 37012974 - 37013083
Alignment:
Q  287 gaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaaag 384  Q
    |||||||| |||||||||||| |||||||||||| ||||||||         |||  |||||||||||| |||||||||||||||||||||||| ||| |    
T  37012974 gaccaaaagtggaagaatatgaaattacagggacaaaatctaatttttttttatacagggactaaaaccagaattcgctaatattacagggacg-aaatg 37013072  T
Q  385 aggtatttacc 395  Q
    |||||||||||    
T  37013073 aggtatttacc 37013083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 46046537 - 46046431
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaaaaag 384  Q
    |||| ||||| |||||||||||| |||||||||||| |||||||          | ||||||||||| |||||||||||||||||||||||||||||||     
T  46046537 gggatcaaaagtggaagaatatgaaattacagggacaaaatcta---tttttttacagggactaaaatcggaattcgctaatattacagggacgaaaaa- 46046442  T
Q  385 aggtatttacc 395  Q
    |||||||||||    
T  46046441 aggtatttacc 46046431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 46046558 - 46046625
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||||||| ||||||||| ||||||||||    
T  46046558 aatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaa 46046625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 46046748 - 46046791
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaag 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  46046748 agggactaaaaccggaattcgctaatattacagggacgaaaaag 46046791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 9619303 - 9619356
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  9619303 agggactaaaaccagaattcgctaatattacagggac-aaaaagaggtatttacc 9619356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 382
Target Start/End: Complemental strand, 31944061 - 31943962
Alignment:
Q  287 gaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat----agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||| |||||||||||| |||||||||||| |||||||||        ||    ||| ||||||||||||||||||||||||||||||||||||||    
T  31944061 gaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttatttacaggaactaaaaccggaattcgctaatattacagggacgaaaa 31943962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 41947019 - 41946966
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  41947019 agggactaaaaccggaattcactaatattacagggacg-aaaagaggtatttacc 41946966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 9516662 - 9516610
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacct 396  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  9516662 ggactaaaaccggaattcgctaatattacagggacg-aaaagagatatttacct 9516610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 9516734 - 9516811
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| |||||||   ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  9516734 acgtaagcagaatctgcatacatgatacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 9516811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 31944204 - 31944127
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||| |||| ||||| ||||| | ||||||||||| ||||||||||||||||||||| |||||||||  |||||||||    
T  31944204 acgtcaacagaatctgcatacttggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacatggaccaaaa 31944127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 285 - 382
Target Start/End: Complemental strand, 15640828 - 15640729
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| || ||||||||| |||||||||||| |||||||||         ||  || ||||||||||||||||||||||||||||||||||||||    
T  15640828 gggaccaaaagtgaaagaatatgaaattacagggacaaaatctaaatcttttttttacaggaactaaaaccggaattcgctaatattacagggacgaaaa 15640729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 3018256 - 3018189
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| |||||||  |||||||||| ||||||||||||||||||||| ||||||||  ||||||||||    
T  3018256 aatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattatagggaccaaaa 3018189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 4356125 - 4356058
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| |||||||  |||||||||| ||||||||||||||||||||| |||||||||  |||||||||    
T  4356125 aatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattacaaggaccaaaa 4356058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 26252502 - 26252614
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         |   ||| |||||||| ||||||||||||||||||||||||| ||    
T  26252502 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaaaactggaattcgctaatattacagggacg-aa 26252600  T
Q  382 aagaggtatttacc 395  Q
    ||||| ||||||||    
T  26252601 aagagatatttacc 26252614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 34064116 - 34064183
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||| ||||||| |||||| |||||||||||||| ||||||||| ||||||||||    
T  34064116 aatctacatacatggcatgtaaaatgagggactaaaagtggaggaatctgaaattacagggaccaaaa 34064183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 396
Target Start/End: Complemental strand, 35376217 - 35376163
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacct 396  Q
    ||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  35376217 agggactaaaaccagaattcgctaatattacagggacg-aaaataggtatttacct 35376163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 9397022 - 9397075
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| |||||||||    
T  9397022 agggactaaaaccggaatttgctaatattacagggacg-aaaagaagtatttacc 9397075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 382
Target Start/End: Complemental strand, 9619093 - 9618993
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||         |   |||||||||||||||||||||||||||||||| ||||||||    
T  9619093 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttgtttttacagggactaaaaccggaattcgctaatattacatggacgaaa 9618994  T
Q  382 a 382  Q
    |    
T  9618993 a 9618993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 18713204 - 18713110
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa-atggaagaatatggaattacagggac 320  Q
    ||||| ||||||||| ||||||| | ||||||||||||| ||||||| |||||||||  ||||||||| | ||| |||| || ||||||||||||    
T  18713204 aatctacatacattgaacgtaaactgagggaccaaaagttgaggaatttgaaattacatggaccaaaagagggaggaatctgaaattacagggac 18713110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 233 - 303
Target Start/End: Original strand, 31090201 - 31090271
Alignment:
Q  233 catacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatggaagaa 303  Q
    ||||||| | ||||||||| | ||||||||||||||||||| ||||||||| |||||||||| ||| ||||    
T  31090201 catacatggtacgtaaaatgaaggaccaaaagtggaggaatctgaaattacggggaccaaaagtgggagaa 31090271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 3273735 - 3273622
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatct----aaannnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaa 380  Q
    |||||||||| |||||||||||| |||||||||||| ||||||    |||        |  |||||||||| |||||||||||||||||||||||||| |    
T  3273735 gggaccaaaagtggaagaatatgaaattacagggacaaaatctataaaaaaaaaaattacggggactaaaatcggaattcgctaatattacagggacg-a 3273637  T
Q  381 aaagaggtatttacc 395  Q
    |||||| ||||||||    
T  3273636 aaagagatatttacc 3273622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 26252491 - 26252418
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagt-ggaggaatatgaaattactgggac 289  Q
    |||||| || ||||| ||||||| ||||||||||| ||||||||||||| |||||||| ||||||||| |||||    
T  26252491 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 26252418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 38574081 - 38573970
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa--nnnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||          | ||||| ||||| |||||||| ||||||||||| ||||| |||    
T  38574081 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggattaaaatcggaattcactaatattacatggacg-aaa 38573983  T
Q  383 agaggtatttacc 395  Q
    |||||||||||||    
T  38573982 agaggtatttacc 38573970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 395
Target Start/End: Original strand, 3273941 - 3273995
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  3273941 atagggactaaaaccgaaattcgctaatattac-gggacg-aaaagaggtatttacc 3273995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 41947180 - 41947231
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  41947180 ggactaaaaccgaaattcgctaatattacagggacg-aaaagagatatttacc 41947231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 48580196 - 48580239
Alignment:
Q  347 taaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  48580196 taaaaccggaattcgctaatattacagggacg-aaaagaggtatt 48580239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 9516937 - 9516987
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  9516937 gactaaaaccgaaattcgctaatattacagggacg-aaaagagatatttacc 9516987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 13132206 - 13132316
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnatag-ggactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||         ||  ||||||||| || ||||||||||||||||||||||| ||||    
T  13132206 gggaccaaaagtggaagaatatgaaattacagggacagaatctaaatcttttttttacaggactaaaatcgaaattcgctaatattacagggacg-aaaa 13132304  T
Q  384 gaggtatttacc 395  Q
     |||||||||||    
T  13132305 taggtatttacc 13132316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 396
Target Start/End: Complemental strand, 34064036 - 34063982
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacct 396  Q
    ||||||||||||  ||||||| |||||||||||||||| |||||||||||||||||    
T  34064036 agggactaaaactagaattcgttaatattacagggacg-aaaagaggtatttacct 34063982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 48580000 - 48580055
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaatta 282  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||||||| ||||||||    
T  48580000 aatctacatacatggcacgtaaaatgagggagcaaaagtggaggaatttgaaatta 48580055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 31090385 - 31090438
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| || ||||||||||||||||||||||| ||||||| ||||||||    
T  31090385 agggactaaaatcgaaattcgctaatattacagggacg-aaaagagatatttacc 31090438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 3018334 - 3018375
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  3018334 agggactaaaaccgaaattcgttaatattacagggacgaaaa 3018375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 393
Target Start/End: Complemental strand, 9396750 - 9396702
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtattta 393  Q
    |||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  9396750 gactaaaatcgaaattcgctaatattacagggacg-aaaagaggtattta 9396702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 347 - 396
Target Start/End: Original strand, 15641046 - 15641094
Alignment:
Q  347 taaaaccggaattcgctaatattacagggacgaaaaagaggtatttacct 396  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  15641046 taaaaccggaattcactaatattacaaggacg-aaaagaggtatttacct 15641094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 31090174 - 31090129
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||    
T  31090174 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaa 31090129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 35376451 - 35376492
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  35376451 agggactaaaactggaatttgctaatattacagggacgaaaa 35376492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 320
Target Start/End: Complemental strand, 15640953 - 15640865
Alignment:
Q  233 catacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||||  |||||||||| | ||||||||||||||||||| |||||||||  ||| ||||| | ||| |||| || ||||||||||||    
T  15640953 catacatgacacgtaaaatgatggaccaaaagtggaggaatctgaaattacaaggatcaaaagtgggaggaatctgaaattacagggac 15640865  T

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Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 18667620 - 18667663
Alignment:
Q  347 taaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||    
T  18667620 taaaactggaattcgctaatattacagggacg-aaaagaggtatt 18667663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 383
Target Start/End: Original strand, 7819347 - 7819386
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  7819347 gactaaaaccgaaattcgctaatattaccgggacgaaaaa 7819386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 12520693 - 12520650
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||    
T  12520693 atagggactaaaactggaattcgctaatattatagggactaaaa 12520650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 31944277 - 31944327
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| ||||||||||||||||| ||||| |||||| |||||||||    
T  31944277 gactaaaaccgaaattcgctaatattacaaggacg-aaaagaagtatttacc 31944327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 12904801 - 12904748
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||  ||||||||||||||| ||||||| ||||||| ||||||||    
T  12904801 agggactaaaaccaaaattcgctaatattatagggacg-aaaagagatatttacc 12904748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 382
Target Start/End: Original strand, 31083428 - 31083462
Alignment:
Q  348 aaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||||| ||||||||||||||||||    
T  31083428 aaaaccggaattcgctcatattacagggacgaaaa 31083462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 31090114 - 31090061
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| || ||||| |||||||||||||||| ||||||| |||||||||    
T  31090114 agggactaaaatcgaaattcactaatattacagggac-aaaaagaagtatttacc 31090061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 36887734 - 36887685
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    |||||||||||||  ||||||||||||||||||||||  ||||||||||||    
T  36887734 agggactaaaaccaaaattcgctaatattacagggac-caaaagaggtatt 36887685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 393
Target Start/End: Complemental strand, 7819066 - 7819018
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtattta 393  Q
    ||||||||||||||||||||||||||| | || || ||||||||||||||    
T  7819066 gactaaaaccggaattcgctaatattatatggtcg-aaaagaggtattta 7819018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 9516723 - 9516678
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||||    
T  9516723 gggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaa 9516678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 13132204 - 13132241
Alignment:
Q  252 aagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  13132204 aagggaccaaaagtggaagaatatgaaattacagggac 13132241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 18713073 - 18713028
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| ||||| |||||| |||||||||||| |||||||||    
T  18713073 gggaccaaaattggaacaatatgaaattacagggacaaaatctaaa 18713028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 20069622 - 20069663
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||| ||||| |||||||||| ||||||||||||||||||    
T  20069622 agggaccaaaactggaattcgctcatattacagggacgaaaa 20069663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 37012820 - 37012775
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||    
T  37012820 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 37012775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 43313535 - 43313576
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||    
T  43313535 agggactaaaaccagaattcgctaatattacagagaccaaaa 43313576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 48580131 - 48580176
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| ||||| |||||| |||||||||||| |||||||||    
T  48580131 gggaccaaaagtggaacaatatgaaattacagggacaaaatctaaa 48580176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 51029097 - 51029138
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||| |||||||| ||||||||||||| ||||    
T  51029097 agggactaaaaccgaaattcgctcatattacagggaccaaaa 51029138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 3018126 - 3018090
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  3018126 agggaccaaaagtggaagaatatgaaattacagggac 3018090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 3273736 - 3273700
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  3273736 agggaccaaaagtggaagaatatgaaattacagggac 3273700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 4356210 - 4356253
Alignment:
Q  347 taaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||    
T  4356210 taaaaccgaaattcgctaatattacagggatg-aaaagaggtatt 4356253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 9619245 - 9619289
Alignment:
Q  286 ggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    ||||||||| |||||||||||| ||||||| |||| |||||||||    
T  9619245 ggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaa 9619289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 393
Target Start/End: Complemental strand, 13131994 - 13131943
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtattta 393  Q
    |||||||||||| | |||||| |||||||||| ||||| ||||||||||||||    
T  13131994 agggactaaaacagaaattcgttaatattacaaggacg-aaaagaggtattta 13131943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 26252381 - 26252337
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaa 329  Q
    |||||||||| ||||||||| || |||||||||||| ||||||||    
T  26252381 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 26252337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 31090175 - 31090139
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  31090175 agggaccaaaagtggaagaatatgaaattacagggac 31090139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 37012825 - 37012785
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||| ||||||||| |||||    
T  37012825 aataagggaccaaaagtggaagaatctgaaattacagggac 37012785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 38574082 - 38574046
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  38574082 agggaccaaaagtggaagaatatgaaattacagggac 38574046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 38574232 - 38574268
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  38574232 agggaccaaaagtggaagaatatgaaattacagggac 38574268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 377
Target Start/End: Complemental strand, 43312263 - 43312227
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggac 377  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  43312263 agggactaaaatcggaatttgctaatattacagggac 43312227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 373
Target Start/End: Complemental strand, 53896500 - 53896468
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacag 373  Q
    ||||||||||||||||||||||| |||||||||    
T  53896500 agggactaaaaccggaattcgctcatattacag 53896468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 7e-22; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 17606555 - 17606458
Alignment:
Q  224 caaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||| | ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| | ||| ||||||| ||||||||||||    
T  17606555 caaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatatgaaattacagggac 17606458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 18462398 - 18462287
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||||||||| || |||||||||||| |||||||||         ||  ||||||||||||||||||||||||||||||||||||| |||    
T  18462398 gggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagggacg-aaa 18462300  T
Q  383 agaggtatttacc 395  Q
    |||||||||||||    
T  18462299 agaggtatttacc 18462287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 227 - 318
Target Start/End: Original strand, 42510148 - 42510240
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacaggg 318  Q
    ||||| ||||||| |||||| |||| ||||||||||||||||||||| ||||||||| |||||||||| | ||| |||| || ||||||||||    
T  42510148 aatctgcatacatggcacgtgaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaggg 42510240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 17606573 - 17606679
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnn-atagggactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    |||||||||| ||||||||| || ||||||| |||| |||||||||         | |||||||||||||||||||||||||||||||||||||| ||||    
T  17606573 gggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctttttttacagggactaaaaccggaattcgctaatattacagggacg-aaaa 17606671  T
Q  384 gaggtatt 391  Q
    ||||||||    
T  17606672 gaggtatt 17606679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 39711337 - 39711449
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||| ||||| |||||||||         |   ||||||||||||| |||||||||||||||||||||||| ||    
T  39711337 gggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatctttttttttacagggactaaaaccagaattcgctaatattacagggacg-aa 39711435  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  39711436 aagaggtatttacc 39711449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 39826184 - 39826251
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||||||||||||||||| |||| |||||    
T  39826184 aatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatatgaaattacagggatcaaaa 39826251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 18342341 - 18342394
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  18342341 agggactaaaaccgaaattcgctaatattacagggacgaaaaa-aggtatttacc 18342394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 33629014 - 33629063
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33629014 agggactaaaaccggaattcgctaatattacagggac-aaaaagaggtatt 33629063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 48072205 - 48072111
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| |||||||  |||||||||| ||||||||||||||||||||| ||||||||| |||| ||||| | ||| |||| || ||||||||||||    
T  48072205 aatctgcatacatgtcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggatcaaaagtgggaggaatttgaaattacagggac 48072111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 395
Target Start/End: Complemental strand, 33628743 - 33628691
Alignment:
Q  342 gggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  33628743 gggactaaaaccagaattcgctaatattacagggacg-aaaagaggtatttacc 33628691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 294
Target Start/End: Original strand, 33628830 - 33628891
Alignment:
Q  233 catacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||||| ||||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||    
T  33628830 catacatggcacgtaaaatgagggaccaaaagtagaggaatctgaaattacagggaccaaaa 33628891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 39711310 - 39711249
Alignment:
Q  233 catacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||||| ||||||||||| |||||||||||||||||||||  |||||||| ||||||||||    
T  39711310 catacatggcacgtaaaatgagggaccaaaagtggaggaatccgaaattacagggaccaaaa 39711249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 393
Target Start/End: Complemental strand, 17606358 - 17606307
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtattta 393  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  17606358 agggactaaaatcggaattcgctaatattacagggacg-aaaagaggtattta 17606307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 240 - 320
Target Start/End: Complemental strand, 29696794 - 29696714
Alignment:
Q  240 tgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatggaagaatatggaattacagggac 320  Q
    |||||||||||| ||||||||||||||||||||| ||||| ||| |||||||||   ||| ||||||| ||||| ||||||    
T  29696794 tgcacgtaaaatgagggaccaaaagtggaggaatctgaaaatacagggaccaaagtgggaggaatatgaaattatagggac 29696714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 4907075 - 4906963
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         |   ||||||||||||  |||||| ||||||||||||||||| ||    
T  4907075 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcattttttttacagggactaaaactagaattcactaatattacagggacg-aa 4906977  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  4906976 aagaggtatttacc 4906963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 395
Target Start/End: Complemental strand, 29696616 - 29696566
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  29696616 gactaaaaccgaaattcgctaatattacagggacg-aaaagaggtatttacc 29696566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 39970777 - 39970836
Alignment:
Q  224 caaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattac 283  Q
    |||||||| ||||||| ||||||||||| |||||||||||||||| |||| |||||||||    
T  39970777 caaaatctgcatacatggcacgtaaaatgagggaccaaaagtggatgaatctgaaattac 39970836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 52058145 - 52058212
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| |||||||  |||||||||| ||||||||||||||||| |||||||||||||  |||||||||    
T  52058145 aatctgcatacatgacacgtaaaatgagggaccaaaagtggagtaatatgaaattacaaggaccaaaa 52058212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 20995752 - 20995699
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||||||||||||| || | ||||||||||||||||    
T  20995752 agggactaaaaccggaattcgctaatattacagagatg-aaaagaggtatttacc 20995699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 39826370 - 39826423
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||    
T  39826370 agggactaaaaccgaaattcgctaatattacatggacg-aaaagaggtatttacc 39826423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 24467741 - 24467630
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||         ||  ||||||||||  ||||||||||||||||||||||||| |||    
T  24467741 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttacagggactaaaattggaattcgctaatattacagggacg-aaa 24467643  T
Q  383 agaggtatttacc 395  Q
    ||| |||||||||    
T  24467642 agatgtatttacc 24467630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 34749250 - 34749139
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnn--atagggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| |||||||||||| |||||| ||||| |||||||||          ||||||||||||| | |||||||||||||||||||||| | |||    
T  34749250 gggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatcttttttttatagggactaaaatcagaattcgctaatattacagggatg-aaa 34749152  T
Q  383 agaggtatttacc 395  Q
    ||| |||||||||    
T  34749151 agatgtatttacc 34749139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 39711185 - 39711075
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||||         ||  |||||||||||||||||||||||||||||||  |||| |||    
T  39711185 gggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattaca-agacg-aaa 39711088  T
Q  383 agaggtatttacc 395  Q
    |||||||||||||    
T  39711087 agaggtatttacc 39711075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 320
Target Start/End: Complemental strand, 13229985 - 13229882
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatg-gaagaatatggaattaca 315  Q
    |||||| || ||||| |||||||  |||| ||||| ||||||||||||||||||||| |||||||||  ||||||||| || || |||| || |||||||    
T  13229985 acgtaagcagaatctgcatacatgacacgcaaaatgagggaccaaaagtggaggaatctgaaattac-aggaccaaaagtgagaggaatctgaaattaca 13229887  T
Q  316 gggac 320  Q
    |||||    
T  13229886 gggac 13229882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 30299475 - 30299419
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattac 283  Q
    ||||| ||||||| |||| |||||| ||||||||||||||||||||| |||||||||    
T  30299475 aatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaattac 30299419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 16294206 - 16294241
Alignment:
Q  248 aaataagggaccaaaagtggaggaatatgaaattac 283  Q
    ||||||||||||||||||||||||||||||||||||    
T  16294206 aaataagggaccaaaagtggaggaatatgaaattac 16294241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 383
Target Start/End: Complemental strand, 17500820 - 17500781
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  17500820 gactaaaaccggaattcgctaatattacagggaccaaaaa 17500781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 17502051 - 17502094
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    
T  17502051 atagggactaaaaccggaattcgctaatattacaaggaccaaaa 17502094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 34749277 - 34749332
Alignment:
Q  233 catacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactggga 288  Q
    ||||||| ||| ||||||| ||||||||||||||||||||| ||||||||| ||||    
T  34749277 catacatggcatgtaaaatgagggaccaaaagtggaggaatctgaaattacaggga 34749332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 37236774 - 37236731
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||    
T  37236774 atagggactaaaaccggaattcgctcatattacagggaccaaaa 37236731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 42510341 - 42510380
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  42510341 ggactaaaaccggaattcgctaatattacagggaccaaaa 42510380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 43539591 - 43539524
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| |||||||  |||||||||| ||| ||||||||||||||||| ||||||||| |||| |||||    
T  43539591 aatctgcatacatgacacgtaaaatgaggtaccaaaagtggaggaatttgaaattacagggagcaaaa 43539524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 382
Target Start/End: Original strand, 4907227 - 4907327
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||         |   |||||||||||| ||||||||||||||||||||||| ||||    
T  4907227 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttacagggactaaaactggaattcgctaatattacagggaggaaa 4907326  T
Q  382 a 382  Q
    |    
T  4907327 a 4907327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 8292858 - 8292805
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||| ||||||||    
T  8292858 agggactaaaaccgggattcgctaatagtacagggacg-aaaagagttatttacc 8292805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 20995912 - 20995819
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||||||||| | ||||||||||||||||| ||| ||||||||| ||||| |||| | ||| |||| || ||||||||||||    
T  20995912 aatctgcatacatggcacgtaaa-tgagggaccaaaagtggagaaatttgaaattacagggacgaaaagtgggaggaatctgaaattacagggac 20995819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 39970970 - 39971023
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||| |||||| |||||||||| ||||| ||||||||||||||||    
T  39970970 agggactaaaaccgaaattcgttaatattacatggacg-aaaagaggtatttacc 39971023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 376
Target Start/End: Complemental strand, 42510127 - 42510034
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacaggga 376  Q
    ||||| |||| |||||||||||| |||||||||||| |||||||||         ||  |||| ||||||||||||||||||||||||||||||    
T  42510127 gggactaaaagtggaagaatatgaaattacagggacaaaatctaaattatttttttacagggattaaaaccggaattcgctaatattacaggga 42510034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 395
Target Start/End: Complemental strand, 52058061 - 52058012
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||||||||||    
T  52058061 actaaaaccggaattcgttaatattacaaggacg-aaaagaggtatttacc 52058012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 395
Target Start/End: Original strand, 52058336 - 52058385
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  52058336 actaaaaccaaaattcgctaatattacagggacg-aaaagaggtatttacc 52058385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 8293072 - 8293185
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat----agggactaaaaccggaattcgctaatattacagggacgaa 380  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         |    ||||||||||||  ||||||| |||||||| ||||||| |    
T  8293072 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaaactagaattcgttaatattatagggacg-a 8293170  T
Q  381 aaagaggtatttacc 395  Q
    |||||||||||||||    
T  8293171 aaagaggtatttacc 8293185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 315
Target Start/End: Complemental strand, 24467871 - 24467783
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattaca 315  Q
    ||||| ||||||| ||||||||||| | |||||||| |||||| ||| ||||||||| |||||||||| | ||| ||||||| |||||||    
T  24467871 aatctgcatacatggcacgtaaaatga-ggaccaaatgtggagtaatctgaaattacagggaccaaaagtgggaggaatatgaaattaca 24467783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 43539675 - 43539712
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  43539675 actaaaaccggaatttgctaatattacagggacgaaaa 43539712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 27039690 - 27039643
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    |||| |||||||||||||||| |||||||||||||| ||||||||||||    
T  27039690 ggaccaaaaccggaattcgctcatattacagggacg-aaaagaggtatt 27039643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 30252163 - 30252277
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacga-a 380  Q
    |||| |||||||||||||||||| |||||| ||||| |||||||||         |   ||||||||||||| |||||||||||||||| |||||| |      
T  30252163 gggatcaaaaatggaagaatatgaaattacggggacaaaatctaaatctttatttttacagggactaaaaccagaattcgctaatattatagggacaagg 30252262  T
Q  381 aaagaggtatttacc 395  Q
    |||||||||||||||    
T  30252263 aaagaggtatttacc 30252277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 30299284 - 30299233
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||| || | ||||||||||||||||||||| ||||||||||||||||    
T  30299284 ggactaaaatcgaagttcgctaatattacagggacg-aaaagaggtatttacc 30299233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 34749431 - 34749482
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||| ||||||||| ||||||||||| ||| |||||||||||||||||    
T  34749431 ggactaaaatcggaattcgataatattacagagac-aaaaagaggtatttacc 34749482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 48072287 - 48072338
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||| |||||||||||  |||| ||||||||||||||||    
T  48072287 ggactaaaaccggaattcactaatattacaatgacg-aaaagaggtatttacc 48072338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 7473926 - 7473993
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| |||||| |||| | ||| ||||||||||||||| |||||||||  |||||||||    
T  7473926 aatctgcatacatggcacgtgaaatgatggatcaaaagtggaggaatctgaaattacaaggaccaaaa 7473993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 13230059 - 13230109
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| |||||||||||||| ||| |||| ||||||||||||||||    
T  13230059 gactaaaaccgaaattcgctaatatttcagagacg-aaaagaggtatttacc 13230109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 217 - 315
Target Start/End: Complemental strand, 18462538 - 18462440
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattaca 315  Q
    |||| |||| ||||| ||||||| ||||| ||||| ||| |||||| |||||| ||||||||||||  |||||||||| | ||| ||||||| |||||||    
T  18462538 acgtcaacagaatctgcatacatggcacgcaaaatgagg-accaaacgtggagtaatatgaaattatagggaccaaaagtgggaggaatatgaaattaca 18462440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 392
Target Start/End: Original strand, 18462612 - 18462658
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtattt 392  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||    
T  18462612 actaaaaccggaatttgctaatattacaggga-ggaaaagaggtattt 18462658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 29696884 - 29696934
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||   ||| ||||||||||||||||    
T  29696884 gactaaaaccggaattcgctaatattacataaacg-aaaagaggtatttacc 29696934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 287 - 330
Target Start/End: Complemental strand, 30299342 - 30299299
Alignment:
Q  287 gaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||| |||||||||||| |||||||||||| |||||||||    
T  30299342 gaccaaaagtggaagaatatgaaattacagggacaaaatctaaa 30299299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 20995928 - 20995962
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattac 283  Q
    |||||||||||||||||||| ||||||||||||||    
T  20995928 aataagggaccaaaagtggaagaatatgaaattac 20995962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 24467892 - 24468001
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa---nnnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||           | |||||||||||||||||||| ||||||||||| ||    ||    
T  24467892 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcactaatattacatgg----aa 24467987  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  24467988 aagaggtatttacc 24468001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 39826104 - 39826051
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| || ||||||||||||||| | ||||| ||||||||||||||||    
T  39826104 agggactaaaatcgaaattcgctaatattatatggacg-aaaagaggtatttacc 39826051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 17606421 - 17606376
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| ||||||||| || |||||||||    
T  17606421 gggaccaaaagtggaagaatatgaaattacaggaacaaaatctaaa 17606376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 20995933 - 20996040
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnatag--ggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| |||||||||||| |||||||| ||| |||||||||         ||   ||||||||||   |||||||||||||||||||||| ||||    
T  20995933 gggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatcttttttttacatggactaaaactaaaattcgctaatattacagggac-aaaa 20996031  T
Q  383 agaggtatt 391  Q
    |||||||||    
T  20996032 agaggtatt 20996040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 4907076 - 4907040
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  4907076 agggaccaaaagtggaagaatatgaaattacagggac 4907040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 8293071 - 8293107
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  8293071 agggaccaaaagtggaagaatatgaaattacagggac 8293107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 34749251 - 34749215
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  34749251 agggaccaaaagtggaagaatatgaaattacggggac 34749215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 39711336 - 39711372
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  39711336 agggaccaaaagtggaagaatatgaaattacggggac 39711372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 39826312 - 39826356
Alignment:
Q  286 ggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    ||||||||| ||||||||| || |||||||||||| |||||||||    
T  39826312 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 39826356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 26385402 - 26385506
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattaca 315  Q
    |||||| || |||||  |||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| | ||| ||||||| |||||||    
T  26385402 acgtaagcagaatctgtatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaactgggaggaatatgaaattaca 26385501  T
Q  316 gggac 320  Q
    |||||    
T  26385502 gggac 26385506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 30618205 - 30618112
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatggaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| | || ||||| ||| ||||| || ||||||||||||    
T  30618205 aatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagtgatcaaaagtgggagaatctgaaattacagggac 30618112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 32017769 - 32017880
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         ||  ||||||||||||||||||||||||||||||||||||| |||    
T  32017769 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagggacg-aaa 32017867  T
Q  383 agaggtatttacc 395  Q
    |||| ||||||||    
T  32017868 agagatatttacc 32017880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 9481295 - 9481183
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||         |   |||||||||||||||||||||||||||||||||||||| ||    
T  9481295 gggaccaaaattggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaaccggaattcgctaatattacagggacg-aa 9481197  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  9481196 aagaggtatttacc 9481183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 24731989 - 24731936
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24731989 agggactaaaaccggaattcgctaatattacagggacg-aaaagaggtatttacc 24731936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 18500427 - 18500316
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         ||  ||||||||||||| ||||||||||||||| ||||||| |||    
T  18500427 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttcttacagggactaaaaccgaaattcgctaatattatagggacg-aaa 18500329  T
Q  383 agaggtatttacc 395  Q
    |||||||||||||    
T  18500328 agaggtatttacc 18500316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 3230016 - 3230091
Alignment:
Q  246 taaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||| |||||||||||||||||||||||||||||||  ||||||||| | ||| ||||||| ||||||||||||    
T  3230016 taaaatgagggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagggac 3230091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 10321787 - 10321746
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10321787 agggactaaaaccggaattcgctaatattacagggacgaaaa 10321746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 24732192 - 24732115
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| ||||||| | ||||||||| ||||||||||||||||||||| ||||||||  ||||||||||    
T  24732192 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattatagggaccaaaa 24732115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 33714611 - 33714688
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| ||||||| | ||||||||| ||||||||||||||||||||| ||||||||| | ||||||||    
T  33714611 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagagaccaaaa 33714688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 18500655 - 18500706
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  18500655 ggactaaaaccgaaattcgctaatattacagggacg-aaaagaggtatttacc 18500706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 393
Target Start/End: Original strand, 26385598 - 26385649
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtattta 393  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  26385598 agggactaaaatcggaattcgctaatattacagggacg-aaaagaggtattta 26385649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 32017670 - 32017731
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactggga 288  Q
    ||||| |||||||  |||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  32017670 aatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattacaggga 32017731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 320
Target Start/End: Original strand, 17142798 - 17142866
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggaccaaaaatg-gaagaatatggaattacagggac 320  Q
    ||||||||||||||||||||| ||||||||| |||||||||| || || |||| || ||||||||||||    
T  17142798 agggaccaaaagtggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaattacagggac 17142866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 304
Target Start/End: Original strand, 18500438 - 18500526
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatat-gaaattactgggaccaaaaatggaagaat 304  Q
    |||||| || ||||| |||||||  |||||||||| ||||||||||||||||||||| |  ||||||| |||||||||| |||| ||||    
T  18500438 acgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctaaaaattacagggaccaaaagtggaggaat 18500526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 26385330 - 26385279
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  26385330 ggactaaaaccagaattcgctaatattacagagacg-aaaagaggtatttacc 26385279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 30618075 - 30617968
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaaaaag 384  Q
    |||||||||| ||||| |||||| |||||||||||| |||||||||        |   ||||||||| | |||||| ||||||||||||||||| |||||    
T  30618075 gggaccaaaagtggaacaatatgaaattacagggacaaaatctaaatttttttaaa--ggactaaaatcagaattcactaatattacagggacg-aaaag 30617979  T
Q  385 aggtatttacc 395  Q
    |||||||||||    
T  30617978 aggtatttacc 30617968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 382
Target Start/End: Complemental strand, 33714531 - 33714496
Alignment:
Q  347 taaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||||||||||||||||||||||||||    
T  33714531 taaaaccggaattcgctaatattacagggacgaaaa 33714496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 2299394 - 2299352
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    ||||||||||||||||||||||||||||||||  |||||||||    
T  2299394 agggactaaaaccggaattcgctaatattacatagacgaaaaa 2299352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 395
Target Start/End: Original strand, 2299641 - 2299690
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||| ||| ||||||| ||||||||    
T  2299641 actaaaaccggaattcgctaatattacaggaacg-aaaagagatatttacc 2299690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 19284181 - 19284129
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacct 396  Q
    |||||||||| ||||||||||||||||||| | ||| |||||||||||||||||    
T  19284181 ggactaaaactggaattcgctaatattacatgaacg-aaaagaggtatttacct 19284129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 21069568 - 21069527
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  21069568 agggactaaaaccggaattcgctcatattacagggactaaaa 21069527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 395
Target Start/End: Original strand, 24732274 - 24732314
Alignment:
Q  354 ggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  24732274 ggaattcgctaatattacagggacg-aaaagaggtatttacc 24732314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 2299451 - 2299511
Alignment:
Q  234 atacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| ||||||||||| ||||||||||||||| ||||| | |||||||  |||||||||    
T  2299451 atacatggcacgtaaaatgagggaccaaaagtggcggaatctaaaattacaaggaccaaaa 2299511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 383
Target Start/End: Original strand, 34113591 - 34113631
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  34113591 ggactaaaaccgaaattcgctaatattacagggaccaaaaa 34113631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 33637772 - 33637709
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagt-ggaggaatatgaaattactgggac 289  Q
    ||||| |||||||  |||||||||| ||||||||||||| |||||||| ||||||||| |||||    
T  33637772 aatctgcatacataacacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 33637709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 9854212 - 9854250
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  9854212 gactaaaaccagaattcgctaatattacagggacaaaaa 9854250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 9854152 - 9854197
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||||    
T  9854152 gggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaa 9854197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 19284242 - 19284197
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||    
T  19284242 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 19284197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 24732203 - 24732248
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||||    
T  24732203 gggaccaaaagtggaagaatatgaaattacatggacaaaatctaaa 24732248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 26385391 - 26385346
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||  |||||||||||| |||||||||    
T  26385391 gggaccaaaagtggaagaatataaaattacagggacaaaatctaaa 26385346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 30458950 - 30458913
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  30458950 actaaaaccgaaattcactaatattacagggacgaaaa 30458913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 33714600 - 33714555
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||||    
T  33714600 gggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaa 33714555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 383
Target Start/End: Original strand, 15942459 - 15942503
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    ||||||||||||| ||||||||||| ||||| ||||||| |||||    
T  15942459 atagggactaaaatcggaattcgctcatattgcagggaccaaaaa 15942503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 18500428 - 18500392
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  18500428 agggaccaaaagtggaagaatatgaaattacagggac 18500392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 32017768 - 32017804
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  32017768 agggaccaaaagtggaagaatatgaaattacagggac 32017804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 10108483 - 10108371
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         |   |||||||||||||||||||||||||||||||||||||| ||    
T  10108483 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacg-aa 10108385  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  10108384 aagaggtatttacc 10108371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 14820407 - 14820296
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         ||  || |||||||||||||||||||||||||||||||||| |||    
T  14820407 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacaggaactaaaaccggaattcgctaatattacagggacg-aaa 14820309  T
Q  383 agaggtatttacc 395  Q
    |||||||||||||    
T  14820308 agaggtatttacc 14820296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 10108614 - 10108547
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  10108614 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaa 10108547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 5554923 - 5554870
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5554923 agggactaaaaccggaattcgctaatattacagggacg-aaaagaggtatttacc 5554870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 320
Target Start/End: Original strand, 17623029 - 17623115
Alignment:
Q  235 tacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| | ||| |||| || ||||||||||||    
T  17623029 tacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatttgaaattacagggac 17623115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 43851719 - 43851666
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43851719 agggactaaaaccggaattcgctaatattacagggacg-aaaagaggtatttacc 43851666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 294
Target Start/End: Complemental strand, 22494622 - 22494561
Alignment:
Q  233 catacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||||  |||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  22494622 catacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattactgggaccaaaa 22494561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 18044153 - 18044204
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18044153 ggactaaaaccggaattcgctaatattacagggacg-aaaagaggtatttacc 18044204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 10108635 - 10108743
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         |   ||||||||||||||||||| |||||||||||||||||| ||    
T  10108635 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaatttgctaatattacagggacg-aa 10108733  T
Q  382 aagaggtatt 391  Q
    ||||||||||    
T  10108734 aagaggtatt 10108743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 14820559 - 14820667
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         |   |||||||||||||||||||||||||||||||||||||  ||    
T  14820559 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggac-taa 14820657  T
Q  382 aagaggtatt 391  Q
    ||||||||||    
T  14820658 aagaggtatt 14820667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 43851798 - 43851865
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| |||||||  |||||||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  43851798 aatctgcatacatgacacgtaaaatgagggatcaaaagtggaggaatatgaaattacagggaccaaaa 43851865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 2583564 - 2583470
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||| ||||||| |||||| |||||||||||||| ||||||||| |||||||||| | ||| |||| || ||||||||||||    
T  2583564 aatctgcatacatggcatgtaaaatgagggactaaaagtggaggaatttgaaattacagggaccaaaagtaggaggaatctgaaattacagggac 2583470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 10171467 - 10171520
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  10171467 agggactaaaaccggaattcgctaatattacagggacg-aaaagcggtatttacc 10171520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 21147990 - 21147941
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21147990 agggactaaaaccggaattcgctaatattacagggac-aaaaagaggtatt 21147941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 42113118 - 42113212
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| |||||||  ||| |||||| ||||||||||||||||| ||||||||||||  |||||||||| | ||| ||||||| ||||||||||||    
T  42113118 aatctgcatacatgacacataaaatgagggaccaaaagtggagtaatatgaaattatagggaccaaaagtgggaggaatatgaaattacagggac 42113212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 320
Target Start/End: Original strand, 30789638 - 30789735
Alignment:
Q  224 caaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||||| ||||||| |||||||| || ||||| ||||||||||||||| |||||||||  ||||||||| | ||| ||||||| ||||||| ||||    
T  30789638 caaaatctgcatacatggcacgtaagatgagggatcaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatatgaaattacaaggac 30789735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 7689849 - 7689900
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  7689849 ggactaaaatcggaattcgctaatattacagggacg-aaaagaggtatttacc 7689900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 320
Target Start/End: Complemental strand, 26136939 - 26136835
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatggaag-aatatggaattaca 315  Q
    |||||| || ||||| ||||||| ||||||||||| ||||||||||| ||||||||| ||||| |||  ||||||||| ||| || ||| || |||||||    
T  26136939 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaagtacaaggaccaaaagtgggagaaatctgaaattaca 26136840  T
Q  316 gggac 320  Q
    |||||    
T  26136839 gggac 26136835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 7689767 - 7689700
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||||||| ||||||||| ||||| ||||    
T  7689767 aatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggactaaaa 7689700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 14767656 - 14767735
Alignment:
Q  242 cacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||||||| || |||||||||||||||||| ||||||||| |||||||||| | ||| |||| || ||||||||||||    
T  14767656 cacgtaaaatgagagaccaaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatctgaaattacagggac 14767735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 5555116 - 5555046
Alignment:
Q  224 caaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||||| |||| || ||||||||||| |||||||||||||| ||||||  |||||||| ||||||||||    
T  5555116 caaaatctgcataaatggcacgtaaaatgagggaccaaaagtgaaggaattcgaaattacagggaccaaaa 5555046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 382
Target Start/End: Original strand, 5555134 - 5555234
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         |   || ||||||||||| ||||||||||||||||||||||||||    
T  5555134 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagagactaaaaccgaaattcgctaatattacagggacgaaa 5555233  T
Q  382 a 382  Q
    |    
T  5555234 a 5555234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 21148260 - 21148313
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||| |||||||||||| |||| ||||||||||||||||    
T  21148260 agggactaaaaccggaattcactaatattacagagacg-aaaagaggtatttacc 21148313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 30789831 - 30789884
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  30789831 agggactaaaaccggaatttactaatattacagggacg-aaaagaggtatttacc 30789884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 30789562 - 30789521
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  30789562 agggactaaaatcggaattcgctaatattacagggacgaaaa 30789521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 42113039 - 42112998
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  42113039 agggactaaaatcggaattcgctaatattacagggacgaaaa 42112998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 42605983 - 42605930
Alignment:
Q  241 gcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| | ||||||||    
T  42605983 gcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagcgaccaaaa 42605930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 7689576 - 7689525
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||||||||||||    
T  7689576 ggactaaagccgaaattcgctaatattacagggacg-aaaagaggtatttacc 7689525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 391
Target Start/End: Original strand, 20877067 - 20877118
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  20877067 atagggactaaaaccggaattcgctcatattacagggac-caaaagaggtatt 20877118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 21148086 - 21148164
Alignment:
Q  242 cacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||||||| ||||||||||||||||||||| |||||||| | ||||||||| | ||| |||| || ||||||||||||    
T  21148086 cacgtaaaatgagggaccaaaagtggaggaatttgaaatta-taggaccaaaagtgggaggaatctgaaattacagggac 21148164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 42606080 - 42606130
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  42606080 gactaaaaccagaattcgctaatattacagggac-aaaaagagatatttacc 42606130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 43481642 - 43481692
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  43481642 gactaaaaccggaattcgctaatattacagtgacg-aaaagagatatttacc 43481692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 17622944 - 17622891
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||    
T  17622944 agggactaaaactgaaattcgctaatattacaaggacg-aaaagaggtatttacc 17622891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 26136739 - 26136690
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    |||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  26136739 agggactaaaactggaattcgctaatattacaggaacg-aaaagaggtatt 26136690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 35367464 - 35367411
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||    
T  35367464 agggattaaaaccggaattcgctaatattgcagggac-caaaagaggtatttacc 35367411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 38726743 - 38726698
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaaag 384  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  38726743 atagggactaaaaccggaatttgctcatattacagggaccaaaaag 38726698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 5555129 - 5555169
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  5555129 aataagggaccaaaagtggaagaatatgaaattacagggac 5555169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 10108630 - 10108670
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  10108630 aataagggaccaaaagtggaagaatatgaaattacagggac 10108670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 14820554 - 14820594
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  14820554 aataagggaccaaaagtggaagaatatgaaattacagggac 14820594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 22494497 - 22494454
Alignment:
Q  286 ggaccaaaaatggaagaatatggaattacagggactaaatctaa 329  Q
    |||||||||||||||||||||| ||||||||| || ||||||||    
T  22494497 ggaccaaaaatggaagaatatgaaattacaggaacaaaatctaa 22494454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 395
Target Start/End: Original strand, 26137007 - 26137061
Alignment:
Q  340 tagggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||| | ||||| ||||||||||||||||| ||||| ||||||||||    
T  26137007 tagggactaaaactgaaattcactaatattacagggacg-aaaagtggtatttacc 26137061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 377
Target Start/End: Original strand, 21144827 - 21144865
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggac 377  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  21144827 atagggactaaaatcggaattcgttaatattacagggac 21144865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 395
Target Start/End: Original strand, 42113309 - 42113358
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||| |||||| |||||||||||||||| |||||| |||||||||    
T  42113309 actaaaaccgaaattcgttaatattacagggacg-aaaagatgtatttacc 42113358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 21148050 - 21148005
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||    
T  21148050 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 21148005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 40486683 - 40486642
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||    
T  40486683 agggactaaaatcggaattcgttaatattacagggaccaaaa 40486642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 40487738 - 40487779
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  40487738 agggactaaaactggaattcgctaatattacaaggaccaaaa 40487779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 10108484 - 10108448
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  10108484 agggaccaaaagtggaagaatatgaaattacagggac 10108448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 14820408 - 14820372
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  14820408 agggaccaaaagtggaagaatatgaaattacagggac 14820372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 17623214 - 17623261
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtattta 393  Q
    ||||||||| ||||| |||||||||||||||| | ||||||||||||||    
T  17623214 actaaaaccagaattggctaatattacagggatg-aaaagaggtattta 17623261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 21148055 - 21148015
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||| ||||||||| |||||    
T  21148055 aataagggaccaaaagtggaagaatctgaaattacagggac 21148015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Original strand, 26136950 - 26136994
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaa 329  Q
    |||||||||| ||||||||| || |||||||||||| ||||||||    
T  26136950 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 26136994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 30789773 - 30789817
Alignment:
Q  286 ggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    ||||||||| ||||||||| || |||||||||||| |||||||||    
T  30789773 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 30789817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 42605866 - 42605822
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaa 329  Q
    |||||||||| |||||||||||| |||||||||||  ||||||||    
T  42605866 gggaccaaaagtggaagaatatgaaattacagggataaaatctaa 42605822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 1e-20; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 20419649 - 20419537
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||         |   |||||||||||||||||||||||||||||| ||||||| ||    
T  20419649 gggaccaaaaatggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattatagggacg-aa 20419551  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  20419550 aagaggtatttacc 20419537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 23704915 - 23704812
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattaca 315  Q
    |||||| || ||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| | ||| |||| || |||||||    
T  23704915 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattaca 23704816  T
Q  316 ggga 319  Q
    ||||    
T  23704815 ggga 23704812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 20963629 - 20963723
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||||||  ||||||||| | ||| ||||||| ||||||||||||    
T  20963629 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaagaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagggac 20963723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 20419660 - 20419737
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| ||||||| | ||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  20419660 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggaccaaaa 20419737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 23704926 - 23705037
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         ||  |||||||||||||||||||||||||||||||| |||| |||    
T  23704926 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccggaattcgctaatattacagagacg-aaa 23705024  T
Q  383 agaggtatttacc 395  Q
    |||||||||||||    
T  23705025 agaggtatttacc 23705037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 395
Target Start/End: Original strand, 20963760 - 20963870
Alignment:
Q  286 ggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    ||||||||| || |||||| || ||||||||||||||||||||||         ||  |||||||||||||||||||||||||||||||||||| |||||    
T  20963760 ggaccaaaagtgaaagaatctgaaattacagggactaaatctaaattttatttttacagggactaaaaccggaattcgctaatattacagggac-aaaaa 20963858  T
Q  384 gaggtatttacc 395  Q
    ||||||||||||    
T  20963859 gaggtatttacc 20963870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 217 - 301
Target Start/End: Original strand, 44816959 - 44817043
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatggaag 301  Q
    |||||| || ||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||||||  ||||||||| ||||||    
T  44816959 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtggaag 44817043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 28218428 - 28218540
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||         |   |||||||||||||||||||||||||||||||||||||| ||    
T  28218428 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggacg-aa 28218526  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  28218527 aagaggtatttacc 28218540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 41600223 - 41600335
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||         |   ||||||||||||||||||||||||||||||||||||| |||    
T  41600223 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacagggac-aaa 41600321  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  41600322 aagaggtatttacc 41600335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 28218232 - 28218179
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28218232 agggactaaaaccggaattcgctaatattacagggacg-aaaagaggtatttacc 28218179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 31851373 - 31851467
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatg-gaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||| || || |||| || ||||||||||||    
T  31851373 aatctgcatacatggcacgtaaaatgagggaccaaaagtggagaaatatgaaattacagggatcaaaattgagaggaatctgaaattacagggac 31851467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 38879989 - 38880098
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaaaaag 384  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||         ||  |||||||||||||||| |||||||||||||||||| |||||    
T  38879989 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaattttttttttaaagactaaaaccggaatttgctaatattacagggacg-aaaag 38880087  T
Q  385 aggtatttacc 395  Q
    |||||||||||    
T  38880088 aggtatttacc 38880098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 20458815 - 20458892
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||||||  |||||||||    
T  20458815 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaa 20458892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 41600092 - 41600159
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||||||| ||||||||| ||||||||||    
T  41600092 aatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaa 41600159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 344 - 398
Target Start/End: Complemental strand, 44816884 - 44816829
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacga-aaaagaggtatttacctga 398  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  44816884 gactaaaaccgaaattcgctaatattacagggacgagaaaagaggtatttacctga 44816829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 12006595 - 12006542
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  12006595 agggactaaaatcggaattcgctaatattacagggacg-aaaagaggtatttacc 12006542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 20419861 - 20419914
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  20419861 agggactaaaaccggaattcgttaatattacagggac-aaaaagaggtatttacc 20419914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 347 - 395
Target Start/End: Complemental strand, 23704710 - 23704663
Alignment:
Q  347 taaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23704710 taaaaccggaattcgctaatattacagggacg-aaaagaggtatttacc 23704663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 12006674 - 12006741
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||||||| ||||||||| | ||||||||    
T  12006674 aatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagtgaccaaaa 12006741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 330
Target Start/End: Complemental strand, 24195014 - 24194931
Alignment:
Q  248 aaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatg-gaagaatatggaattacagggactaaatctaaa 330  Q
    |||| ||||||||||||||||||||| ||||||||  |||||||||| || || |||| || |||||||||||| |||||||||    
T  24195014 aaatgagggaccaaaagtggaggaatctgaaattatagggaccaaaagtgagaggaatctgaaattacagggacaaaatctaaa 24194931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 6465909 - 6465867
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  6465909 agggactaaaaccggaattcgctaatattacatggacgaaaaa 6465867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 395
Target Start/End: Complemental strand, 16995313 - 16995201
Alignment:
Q  284 tgggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    ||||||||||| ||||||||| || |||||||||||| |||||||||         ||  || |||||||||| |||||||||||||||||| |||| ||    
T  16995313 tgggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatattttttttacaggaactaaaaccgaaattcgctaatattacagagacg-aa 16995215  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  16995214 aagaggtatttacc 16995201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 20458746 - 20458704
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  20458746 agggactaaaaccggaattcgttaatattacagggacgaaaaa 20458704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 25772487 - 25772553
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattac 283  Q
    |||||| || ||||| ||||||| | ||||||||| ||||||||||||||||||||| |||||||||    
T  25772487 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattac 25772553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 48672603 - 48672656
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  48672603 agggactaaaaccgaaattcgctaatattacagagacg-aaaagaggtatttacc 48672656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 23383613 - 23383500
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnn----atagggactaaaaccggaattcgctaatattacagggacgaa 380  Q
    ||||| ||||||||||||||||| ||||| |||||| |||||||||            |||||||||||||||||||||| |||||||||||| |||| |    
T  23383613 gggacaaaaaatggaagaatatgaaattatagggacaaaatctaaatcttttttttttatagggactaaaaccggaattcactaatattacagagacg-a 23383515  T
Q  381 aaagaggtatttacc 395  Q
    ||||| |||||||||    
T  23383514 aaagaagtatttacc 23383500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 23383624 - 23383701
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| |||||||  |||||||||| |||||||||||||| |||||| |||||||||  |||||||||    
T  23383624 acgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgaaggaatttgaaattacaaggaccaaaa 23383701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 38879837 - 38879724
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat----agggactaaaaccggaattcgctaatattacagggacgaa 380  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         |    ||| |||||||  ||||||||||||||||||||||||| |    
T  38879837 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaaattggaattcgctaatattacagggacg-a 38879739  T
Q  381 aaagaggtatttacc 395  Q
    |||||||||||||||    
T  38879738 aaagaggtatttacc 38879724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 24195198 - 24195249
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  24195198 ggactaaaatcagaattcgctaatattacagggacg-aaaagaggtatttacc 24195249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 320
Target Start/End: Original strand, 38879848 - 38879952
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatggaag-aatatggaattaca 315  Q
    |||||| || ||||| ||||||| |||| |||||| ||||||||||  ||||||||| ||||||||  | |||||||| ||| || |||||| |||||||    
T  38879848 acgtaagcagaatctgcatacatggcacataaaatgagggaccaaatttggaggaatctgaaattatagagaccaaaagtgggaggaatatgaaattaca 38879947  T
Q  316 gggac 320  Q
    |||||    
T  38879948 gggac 38879952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 41600010 - 41599959
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||||||||||    
T  41600010 ggactaaaaccgaaattcgctaatattacagggatg-aaaagaggtatttacc 41599959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 7658292 - 7658342
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||||||||    
T  7658292 gactaaaaccgaaattcgttaatattacagggacg-aaaagaggtatttacc 7658342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 10409618 - 10409551
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||| ||||||| ||||| ||||||||||||||| |||||||||  |||||||||    
T  10409618 aatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaattacaaggaccaaaa 10409551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 12006805 - 12006917
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||         |   ||||||||||| |||||||||||||||||||| | ||| ||    
T  12006805 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaatcggaattcgctaatattacatgaacg-aa 12006903  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  12006904 aagaggtatttacc 12006917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 384
Target Start/End: Original strand, 14646974 - 14647017
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaag 384  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  14646974 agggactaaaaccggaattcgctcatattacagggactaaaaag 14647017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 23383765 - 23383877
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||  |||||||||||| |||||||||||| |||||||||         |   ||||||||||| | |||||| ||||||||||||||||| ||    
T  23383765 gggaccaaaggtggaagaatatgaaattacagggacaaaatctaaatcttttttttttcagggactaaaatcagaattcactaatattacagggacg-aa 23383863  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  23383864 aagaggtatttacc 23383877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 395
Target Start/End: Complemental strand, 48672328 - 48672278
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  48672328 gactaaaaccgaaattcactaatattacagggacg-aaaagaggtatttacc 48672278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 48672413 - 48672480
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||| ||||||| ||||| ||||||||||||||| |||||||||  |||||||||    
T  48672413 aatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaattacaaggaccaaaa 48672480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 10409697 - 10409750
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| |||||||||||||||||||| ||| | ||||||||||||||||    
T  10409697 agggactaaaatcggaattcgctaatattacatggatg-aaaagaggtatttacc 10409750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 395
Target Start/End: Original strand, 20459022 - 20459067
Alignment:
Q  349 aaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  20459022 aaaccggaattccctaatattacagggacg-aaaagaggtatttacc 20459067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 395
Target Start/End: Complemental strand, 25772414 - 25772365
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||| || ||||||||||||||||||||||| ||||||||||||||||    
T  25772414 actaaaatcgaaattcgctaatattacagggacg-aaaagaggtatttacc 25772365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 301
Target Start/End: Complemental strand, 33162779 - 33162705
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatggaag 301  Q
    ||||| ||||||| |||| |||||| |||||||||||||| || ||| |||||||||  ||||||||| ||||||    
T  33162779 aatctgcatacatggcacataaaatgagggaccaaaagtgaagtaatctgaaattacacggaccaaaagtggaag 33162705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 289
Target Start/End: Original strand, 48648395 - 48648457
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    ||||| ||||||| ||||||||||  ||||||||||| ||||||||| ||||||||| |||||    
T  48648395 aatctgcatacatggcacgtaaaaggagggaccaaaattggaggaatctgaaattacagggac 48648457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 248 - 320
Target Start/End: Complemental strand, 6466077 - 6466004
Alignment:
Q  248 aaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||| ||||||||||||||||| ||||||||||||| |||| ||||| | ||| |||| || ||||||||||||    
T  6466077 aaatgagggaccaaaagtggagtaatatgaaattacagggatcaaaagtgggaggaatttgaaattacagggac 6466004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 393
Target Start/End: Complemental strand, 7658023 - 7657972
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtattta 393  Q
    ||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  7658023 agggattaaaaccgaaattcgctaatattacatggacg-aaaagaggtattta 7657972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 320
Target Start/End: Original strand, 28218323 - 28218391
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| | ||| |||| || ||||||||||||    
T  28218323 agggaccaaaagtggagtaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggac 28218391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 33162862 - 33162913
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||| | |||||||||||||||||| |||| ||||||||||||||||    
T  33162862 ggactaaaacagaaattcgctaatattacagagacg-aaaagaggtatttacc 33162913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 391
Target Start/End: Original strand, 31852157 - 31852203
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  31852157 gactaaaaccgaaattcgttaatattacagggacg-aaaagaggtatt 31852203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 1250340 - 1250434
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| |||||||  || ||||||| | |||  ||||||||||||||||| |||||| | |||||||||| ||| |||| || ||||||||||||    
T  1250340 aatctgcatacatgtcatgtaaaatgaaggattaaaagtggaggaatatggaattacagtgaccaaaaataggaggaatttgaaattacagggac 1250434  T

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Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 1250533 - 1250571
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  1250533 gactaaaactggaattcgctaatattacaaggacgaaaa 1250571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 25772655 - 25772708
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||| ||||||| ||||||||| ||||||| ||||||| ||||||||    
T  25772655 agggactaaaactggaattcactaatattatagggacg-aaaagagatatttacc 25772708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 329
Target Start/End: Original strand, 31851506 - 31851548
Alignment:
Q  287 gaccaaaaatggaagaatatggaattacagggactaaatctaa 329  Q
    |||||||| |||||||||||| |||||||||||| ||||||||    
T  31851506 gaccaaaagtggaagaatatgaaattacagggacaaaatctaa 31851548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 1250471 - 1250516
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| ||||| |||||| |||||||||    
T  1250471 gggaccaaaagtggaagaatatgaaattaaagggacaaaatctaaa 1250516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 20963548 - 20963507
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||  |||||| |||||||||||||||||||||    
T  20963548 agggactaaaactagaattcactaatattacagggacgaaaa 20963507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 20963608 - 20963563
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| ||||||||| |  ||||||||||||||||||||||    
T  20963608 gggaccaaaagtggaagaatctaaaattacagggactaaatctaaa 20963563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 23258248 - 23258289
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||| |||||||||||||||||||||||||| ||| ||||    
T  23258248 agggaccaaaaccggaattcgctaatattacagagaccaaaa 23258289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 24195061 - 24195106
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||||    
T  24195061 gggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaa 24195106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 28218292 - 28218247
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||    
T  28218292 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 28218247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 23704925 - 23704961
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  23704925 agggaccaaaagtggaagaatatgaaattacagggac 23704961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 377
Target Start/End: Complemental strand, 33131687 - 33131651
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggac 377  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  33131687 agggactaaaaccggaaatcgctcatattacagggac 33131651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 38879838 - 38879802
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  38879838 agggaccaaaagtggaagaatatgaaattacagggac 38879802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 48648314 - 48648263
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||| || |||||||| |||||||||||||| ||||||| ||||||||    
T  48648314 ggactaaaatcgaaattcgctgatattacagggacg-aaaagagatatttacc 48648263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 9267088 - 9266976
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         |   |||||||||||||||||||||||||||||||||||||| ||    
T  9267088 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacg-aa 9266990  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  9266989 aagaggtatttacc 9266976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 14171910 - 14171963
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14171910 agggactaaaaccggaattcgctaatattacagggacg-aaaagaggtatttacc 14171963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 301
Target Start/End: Original strand, 14262170 - 14262244
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaatggaag 301  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||| ||||| ||||||    
T  14262170 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggatcaaaagtggaag 14262244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 14262360 - 14262413
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14262360 agggactaaaaccggaattcgctaatattacagggacg-aaaagaggtatttacc 14262413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 217 - 283
Target Start/End: Original strand, 17465492 - 17465558
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattac 283  Q
    |||||| || ||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  17465492 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattac 17465558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 9267099 - 9267176
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| ||||||||| ||||||||| ||||||||||||||||||||| |||||||||  |||||||||    
T  9267099 acgtaagcagaatctgcatacattgtacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaa 9267176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 14162118 - 14162021
Alignment:
Q  224 caaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||| | ||||||| ||||||||||| ||||||||||| ||||||||| ||||||||| |||||||||| | ||| |||| || ||||||||||||    
T  14162118 caaaatttgcatacatggcacgtaaaatgagggaccaaaaatggaggaatttgaaattacagggaccaaaattaggaggaatctgaaattacagggac 14162021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 30500306 - 30500417
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| ||||| |||||| |||||||||||| |||||||||         ||  ||||||||||| ||||||||||||||||||||||||| |||    
T  30500306 gggaccaaaagtggaacaatatgaaattacagggacaaaatctaaattttttttttacagggactaaaactggaattcgctaatattacagggacg-aaa 30500404  T
Q  383 agaggtatttacc 395  Q
    |||||||||||||    
T  30500405 agaggtatttacc 30500417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 47575406 - 47575499
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacaggga 319  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||||||| ||||||||| ||||| |||||| ||| |||| || |||||||||||    
T  47575406 aatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatttgaaattacagggacaaaaaatgggaggaatttgaaattacaggga 47575499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 49986782 - 49986705
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| ||||||| | ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  49986782 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 49986705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 5800718 - 5800606
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    ||||||||||||||||||||||| ||||||||||||  ||||||||         |   |||||||||||||| |||||| |||||||||||||||| ||    
T  5800718 gggaccaaaaatggaagaatatgaaattacagggacataatctaaatccttttttttacagggactaaaaccgaaattcgttaatattacagggacg-aa 5800620  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  5800619 aagaggtatttacc 5800606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 344 - 395
Target Start/End: Complemental strand, 16722042 - 16721992
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16722042 gactaaaaccggaattcgctaatattacagggacg-aaaagaggtatttacc 16721992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 16722256 - 16722368
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnn---atagggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||           | |||||||||||| | ||||||||||||||||||||||| ||    
T  16722256 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttgtacagggactaaaactgaaattcgctaatattacagggacg-aa 16722354  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  16722355 aagaggtatttacc 16722368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 30500154 - 30500048
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnn-atagggactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         | |||||||||||||| ||||||||||||||||||||| | ||||    
T  30500154 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatttttttttacagggactaaaaccgaaattcgctaatattacagggatg-aaaa 30500056  T
Q  384 gaggtatt 391  Q
    ||||||||    
T  30500055 gaggtatt 30500048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 35995791 - 35995679
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnn---atagggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||           | |||||||||||||||||||||||||||||||||| ||| ||    
T  35995791 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaaaaaaaaattctacagggactaaaaccggaattcgctaatattacaggaacg-aa 35995693  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  35995692 aagaggtatttacc 35995679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 43572620 - 43572541
Alignment:
Q  242 cacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||||||| ||||||||||||||||| ||| ||||||||| |||||||||| | ||| ||||||| ||||||||||||    
T  43572620 cacgtaaaatgagggaccaaaagtggagtaatttgaaattacagggaccaaaagtgggaggaatatgaaattacagggac 43572541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 391
Target Start/End: Original strand, 14162194 - 14162243
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14162194 agggactaaaaccggaattcgctaatattacagggac-aaaaagaggtatt 14162243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 19112818 - 19112765
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  19112818 agggactaaaaccggaattcgctaatattacatggacg-aaaagaggtatttacc 19112765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 19720387 - 19720334
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  19720387 agggactaaaaccggaattcgctaatattacagggacg-aaaagagatatttacc 19720334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 21633140 - 21633046
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| ||||||| |||| |||||| ||||||||||||||||||||| |||||||||  ||||||||| | ||| |||| || ||||||||||||    
T  21633140 aatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattacagggac 21633046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 27946189 - 27946242
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  27946189 agggactaaaaccggaattcgctaatattactgggacg-aaaagaggtatttacc 27946242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 45969969 - 45969916
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  45969969 agggactaaaaccggaattcactaatattacagggacg-aaaagaggtatttacc 45969916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 4204842 - 4204907
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaa 292  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||| ||||||||||||| | ||||||    
T  4204842 aatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatatgaaattacagagaccaa 4204907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 5800852 - 5800755
Alignment:
Q  224 caaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||| | ||||||| ||| ||||||| ||||||||||| ||||||||| ||||||||| |||||||||| | ||| |||| || ||||||||||||    
T  5800852 caaaatttgcatacatggcatgtaaaatgagggaccaaaaatggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacagggac 5800755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 19112889 - 19112966
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| ||||||| | ||||||||| ||||||||||||||||| ||| ||||||||| ||||||||||    
T  19112889 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggagaaatctgaaattacagggaccaaaa 19112966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 319
Target Start/End: Original strand, 30500175 - 30500268
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacaggga 319  Q
    ||||| ||||||| ||||||||||| |||||||||||||| |||||| |||||||||  ||||||||| | ||| |||| || |||||||||||    
T  30500175 aatctgcatacatggcacgtaaaatgagggaccaaaagtgaaggaatttgaaattacatggaccaaaagtgggaggaatctgaaattacaggga 30500268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 35995802 - 35995879
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| |||||||  |||||||||| |||||||||||||||||||| |||||||||| ||||| ||||    
T  35995802 acgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaacatgaaattacagggacaaaaa 35995879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 45003750 - 45003673
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| ||||||| ||| ||||||| ||||| ||||||||||||||||||||||||| |||| |||||    
T  45003750 acgtaagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatatgaaattacagggaacaaaa 45003673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 291
Target Start/End: Complemental strand, 16722235 - 16722171
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggacca 291  Q
    ||||| |||||||  |||||||||| ||||||||||||||||||||| ||||||||| |||||||    
T  16722235 aatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggacca 16722171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 38283794 - 38283738
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattac 283  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||| |||||||||    
T  38283794 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattac 38283738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 320
Target Start/End: Complemental strand, 45970153 - 45970065
Alignment:
Q  233 catacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||||  |||||||||| ||||||||||||||||| ||| ||||||||| |||||||||| | ||| |||| || ||||||||||||    
T  45970153 catacatgacacgtaaaatgagggaccaaaagtggagaaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggac 45970065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 14161984 - 14161872
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnn---atagggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||           ||||| |||||||| ||||||||||||||||||||||||| ||    
T  14161984 gggaccaaaagtggaagaatatgaaattacagggacataatctaaatctttttttttataggaactaaaactggaattcgctaatattacagggacg-aa 14161886  T
Q  382 aagaggtatttacc 395  Q
    ||||| ||||||||    
T  14161885 aagagatatttacc 14161872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 14171720 - 14171787
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||||||||||| ||||| ||||| ||||||||| ||||||||| ||||||||||    
T  14171720 aatctgcatacatggcacgtaaaatgagggatcaaaaatggaggaatctgaaattacagggaccaaaa 14171787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 382
Target Start/End: Complemental strand, 14262088 - 14262049
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14262088 ggactaaaaccggaattcgctaatattacagggacgaaaa 14262049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 15328689 - 15328610
Alignment:
Q  242 cacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||||||| || |||||||||||||||||| ||||||||| |||||||||| | ||| |||| || ||||||||||||    
T  15328689 cacgtaaaatgagagaccaaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatctgaaattacagggac 15328610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 381
Target Start/End: Original strand, 45003761 - 45003859
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa--nnnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||          | ||| |||||||||| ||||||||||||||||||||||||||    
T  45003761 gggaccaaaagtggaagaatatgaaattatagggactaaatctaaatcttttttttacaggaactaaaaccgaaattcgctaatattacagggacgaaa 45003859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 395
Target Start/End: Complemental strand, 49986578 - 49986528
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  49986578 gactaaaaccggaattctctaatattacagggacg-aaaagaggtatttacc 49986528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 9267298 - 9267351
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  9267298 agggactaaaatcggaattcgctaatattacaaggacg-aaaagaggtatttacc 9267351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 11003786 - 11003733
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  11003786 agggactaaaaccggaattcggtaatattacaaggac-aaaaagaggtatttacc 11003733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 19113089 - 19113142
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||    
T  19113089 agggactaaaaccggaattcgttaatattatagggacg-aaaagaggtatttacc 19113142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 27946163 - 27946114
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  27946163 agggactaaaaccgaaattcgctaatattacagggacg-aaaagaggtatt 27946114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 35995999 - 35996052
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| |||||||||    
T  35995999 agggactaaaatcggaattcgctaatattacagggacg-aaaagatgtatttacc 35996052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 45970240 - 45970293
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  45970240 agggactaaaaccgaaattcactaatattacagggacg-aaaagaggtatttacc 45970293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 292
Target Start/End: Original strand, 52552826 - 52552891
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaa 292  Q
    ||||| |||||||  |||||||||| |||||||||||||| |||||| ||||||||| ||||||||    
T  52552826 aatctgcatacatgacacgtaaaatgagggaccaaaagtgaaggaatttgaaattacagggaccaa 52552891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 395
Target Start/End: Complemental strand, 20853743 - 20853696
Alignment:
Q  347 taaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  20853743 taaaaccgaaattcgctaatattacagggacg-aaaagaggtatttacc 20853696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 20853830 - 20853886
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattac 283  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||| | |||||||    
T  20853830 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctaaaattac 20853886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 33372635 - 33372583
Alignment:
Q  242 cacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||||||| ||||| ||||||||||||||||||||||||| | ||||||||    
T  33372635 cacgtaaaatgagggatcaaaagtggaggaatatgaaattacagagaccaaaa 33372583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 382
Target Start/End: Complemental strand, 35740870 - 35740830
Alignment:
Q  342 gggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  35740870 gggactaaaaccggaattcgctaatattacagggaccaaaa 35740830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 391
Target Start/End: Original strand, 5800870 - 5800977
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||||         |   |||||||||| ||||||||||||||||||||||||||| ||    
T  5800870 gggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaa-ccggaattcgctaatattacagggacg-aa 5800967  T
Q  382 aagaggtatt 391  Q
    ||||||||||    
T  5800968 aagaggtatt 5800977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 21633161 - 21633258
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnn---atagggactaaaaccggaattcgctaatattacagggacga 379  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||           |||||||||||||| | ||||||||||||||||||||||||    
T  21633161 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaactgaaattcgctaatattacagggacga 21633258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 43572502 - 43572390
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||         |   |||||||||||||| ||||||||||||||||||| ||| ||    
T  43572502 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatttttctttttacagggactaaaaccgaaattcgctaatattacaggaacg-aa 43572404  T
Q  382 aagaggtatttacc 395  Q
    |||| |||||||||    
T  43572403 aagatgtatttacc 43572390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 24490243 - 24490285
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    |||||||||||||||||||| ||||||||||||||| ||||||    
T  24490243 agggactaaaaccggaattcactaatattacagggaggaaaaa 24490285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 395
Target Start/End: Complemental strand, 33372456 - 33372407
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  33372456 actaaaaccagaattcgctaatattacagggacg-aaaagagatatttacc 33372407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 395
Target Start/End: Original strand, 49986856 - 49986905
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  49986856 actaaaaccgaaattcgctaatattactgggacg-aaaagaggtatttacc 49986905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 375
Target Start/End: Original strand, 3425973 - 3426006
Alignment:
Q  342 gggactaaaaccggaattcgctaatattacaggg 375  Q
    ||||||||||||||||||||||||||||||||||    
T  3425973 gggactaaaaccggaattcgctaatattacaggg 3426006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 35741908 - 35741949
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  35741908 agggactaaaactggaattcgctaatattacagggaccaaaa 35741949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 36990983 - 36991024
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  36990983 agggactaaaaccgaaattcgctaatattacagggaccaaaa 36991024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 37016423 - 37016464
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  37016423 agggactaaaaccgaaattcgctaatattacagggaccaaaa 37016464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 395
Target Start/End: Complemental strand, 14171635 - 14171588
Alignment:
Q  347 taaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  14171635 taaaatcggaattcgctaatattacagggacg-aaaagtggtatttacc 14171588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Original strand, 16722251 - 16722291
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  16722251 aataagggaccaaaagtggaagaatatgaaattacagggac 16722291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 17649337 - 17649384
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtattta 393  Q
    |||||||||||||||||||| |||||||||| || ||||||||||||||    
T  17649337 actaaaaccggaattcgctagtattacagggtcg-aaaagaggtattta 17649384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 20854021 - 20854072
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||| ||||||||||||||||| ||||| ||||||| ||||||||    
T  20854021 ggactaaaaccgaaattcgctaatattacatggacg-aaaagagatatttacc 20854072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 30500159 - 30500119
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  30500159 aataagggaccaaaagtggaagaatatgaaattacagggac 30500119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 395
Target Start/End: Complemental strand, 45003552 - 45003497
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||| ||||||||||| ||||||||||| |||||| ||||||| ||||||||    
T  45003552 atagggactgaaaccggaatttgctaatattacggggacg-aaaagagatatttacc 45003497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 396
Target Start/End: Original strand, 52552953 - 52553066
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||||| ||| |||||||||         |   ||||||||||||  |||||||||||||||||| ||||| ||    
T  52552953 gggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatctttttttttacagggactaaaactagaattcgctaatattacaaggacg-aa 52553051  T
Q  382 aagaggtatttacct 396  Q
    |||| ||||||||||    
T  52553052 aagatgtatttacct 52553066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 395
Target Start/End: Complemental strand, 21632940 - 21632902
Alignment:
Q  356 aattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  21632940 aattcgctaatattacagggacg-aaaagaggtatttacc 21632902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 382
Target Start/End: Complemental strand, 38283602 - 38283563
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||||||||| |||||||||||||| |||||    
T  38283602 ggactaaaaccggaattcgttaatattacagggatgaaaa 38283563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 3424828 - 3424779
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    |||||| |||||||||| |||||||||||||||||||  ||||||||||||    
T  3424828 agggaccaaaaccggaaatcgctaatattacagggac-caaaagaggtatt 3424779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 5800865 - 5800899
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattac 283  Q
    |||||||||||||||||||| ||||||||||||||    
T  5800865 aataagggaccaaaagtggaagaatatgaaattac 5800899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 395
Target Start/End: Original strand, 33372732 - 33372781
Alignment:
Q  345 actaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||| || |||||||||||||||| |||||| ||||||||||||||||    
T  33372732 actaaaatcgaaattcgctaatattacggggacg-aaaagaggtatttacc 33372781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 11003943 - 11003882
Alignment:
Q  260 aaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||||||||||| ||||||||| |||||||||| | ||| |||| || ||||||||||||    
T  11003943 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggac 11003882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 14262149 - 14262104
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||    
T  14262149 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 14262104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 19112878 - 19112833
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| |||| ||||||| |||||||||    
T  19112878 gggaccaaaagtggaagaatatgaaattccagggacaaaatctaaa 19112833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Complemental strand, 20853809 - 20853764
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| |||||||||||| ||||| |||||| |||||||||    
T  20853809 gggaccaaaagtggaagaatatgaaattatagggacaaaatctaaa 20853764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 20853961 - 20854006
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||    
T  20853961 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 20854006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 9267089 - 9267053
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  9267089 agggaccaaaagtggaagaatatgaaattacagggac 9267053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 14161985 - 14161949
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  14161985 agggaccaaaagtggaagaatatgaaattacagggac 14161949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 14262154 - 14262114
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||| ||||||||| |||||    
T  14262154 aataagggaccaaaagtggaagaatctgaaattacagggac 14262114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 395
Target Start/End: Original strand, 17465697 - 17465744
Alignment:
Q  347 taaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||| | ||||||||||||||||| ||||| ||||||||||||||||    
T  17465697 taaaactgaaattcgctaatattacaaggacg-aaaagaggtatttacc 17465744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 281
Target Start/End: Complemental strand, 19112883 - 19112851
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaatt 281  Q
    |||||||||||||||||||| ||||||||||||    
T  19112883 aataagggaccaaaagtggaagaatatgaaatt 19112851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 22263325 - 22263419
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| | ||| |||| || ||||||||||||    
T  22263325 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaactaggaggaatctgaaattacagggac 22263419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 217 - 289
Target Start/End: Complemental strand, 26236349 - 26236277
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||| || ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  26236349 acgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggac 26236277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 23806217 - 23806329
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         |   |||||||||||||| |||||||||||||||||||||| |||    
T  23806217 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggac-aaa 23806315  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  23806316 aagaggtatttacc 23806329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 15106314 - 15106244
Alignment:
Q  224 caaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||||| ||||||| ||||||||||| ||||| ||||||||||||||| ||||||||| ||||||||||    
T  15106314 caaaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaa 15106244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 23854800 - 23854894
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||||| |||| ||||| | ||| |||| || ||||||||||||    
T  23854800 aatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggatcaaaagtgggaggaatctgaaattacagggac 23854894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 391
Target Start/End: Complemental strand, 19251583 - 19251476
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||         ||  ||||||||||||| ||||||||||||||||||||||| |||    
T  19251583 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttacagggactaaaaccgaaattcgctaatattacagggacg-aaa 19251485  T
Q  383 agaggtatt 391  Q
    |||||||||    
T  19251484 agaggtatt 19251476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 320
Target Start/End: Complemental strand, 23806199 - 23806102
Alignment:
Q  224 caaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||| | ||||||| ||||||||||| ||||||||||||||||||||| ||||||||  |||||||||| | ||| |||| || ||||||||||||    
T  23806199 caaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattatagggaccaaaagtgggaggaatctgaaattacagggac 23806102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 26236360 - 26236471
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat--agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||||||||| || |||||||||||| |||||||||         |  | |||||||||||| ||||||||||||||||||||||| |||    
T  26236360 gggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttccaaggactaaaaccgaaattcgctaatattacagggacg-aaa 26236458  T
Q  383 agaggtatttacc 395  Q
    |||||||||||||    
T  26236459 agaggtatttacc 26236471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 395
Target Start/End: Complemental strand, 17850643 - 17850588
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  17850643 atagggactaaaatcggaattcgctaatattacagggacg-aaaagaggtatttacc 17850588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 33456426 - 33456498
Alignment:
Q  145 ccgcctgaagattcacttgcttgggtttgtgattatcatgaaggagatattcgcgtttcaatggatgattgga 217  Q
    |||| ||||||||||||||  |||||||||||||||| |||||||||||||   |||||||||||||||||||    
T  33456426 ccgcgtgaagattcacttgtctgggtttgtgattatcctgaaggagatattgttgtttcaatggatgattgga 33456498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 17463356 - 17463468
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||| ||||| |||||||||||| |||||||||||| |||||||||         |   ||||||||||||||||||||||||||||||||||| || ||    
T  17463356 gggatcaaaagtggaagaatatgcaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacaggggcg-aa 17463454  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  17463455 aagaggtatttacc 17463468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 19251714 - 19251647
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||||||||||| | ||||||||||||||||||||||||||||| |||| |||||    
T  19251714 aatctgcatacatggcacgtaaaatgatggaccaaaagtggaggaatatgaaattacagggatcaaaa 19251647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 320
Target Start/End: Original strand, 26560688 - 26560782
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||||||||||| ||||| ||||||||||||||| ||||||||| |||| ||||| | ||| |||| || ||||||||||||    
T  26560688 aatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatttgaaattacagggatcaaaagtgggaggaatctgaaattacagggac 26560782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 26136071 - 26135994
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| ||||||| | ||||||||||||||||||||||||||||||| | |||||||  |||||||||    
T  26136071 acgtaagcagaatctgcatacatggtacgtaaaataagggaccaaaagtggaggaatctaaaattacaaggaccaaaa 26135994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 217 - 289
Target Start/End: Original strand, 30390583 - 30390655
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||| |||||||| ||||||| ||||||||||| ||||||||||| || |||||| ||||||||| |||||    
T  30390583 acgtaagcaaaatctgcatacatagcacgtaaaatgagggaccaaaaatgaaggaatctgaaattacagggac 30390655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 12419044 - 12419087
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  12419044 atagggactaaaaccggaattcgctaatattacagggaccaaaa 12419087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 12431104 - 12431147
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  12431104 atagggactaaaaccggaattcgctaatattacagggaccaaaa 12431147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 17850913 - 17850963
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  17850913 gactaaaaccgaaattcgctaatattacagggacg-aaaagaggtatttacc 17850963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 22263520 - 22263570
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  22263520 gactaaaaccggaattcgctaatattacaggaacg-aaaagaggtatttacc 22263570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 391
Target Start/End: Complemental strand, 23854797 - 23854693
Alignment:
Q  289 ccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaaaaga 385  Q
    |||||| |||||||||||| |||||||||||| |||||||||         |   |||||||||||||| ||||||||||||||||||||||| ||||||    
T  23854797 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggacg-aaaaga 23854699  T
Q  386 ggtatt 391  Q
    ||||||    
T  23854698 ggtatt 23854693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 395
Target Start/End: Original strand, 23855025 - 23855071
Alignment:
Q  348 aaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23855025 aaaaccggaattcgctaatattacagggacg-aaaagaggtatttacc 23855071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 39878331 - 39878252
Alignment:
Q  242 cacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    |||||||||| ||||||||||||||||| ||| ||||||||  |||||||||| | ||| ||||||| ||||||||||||    
T  39878331 cacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacagggac 39878252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 42670861 - 42670920
Alignment:
Q  235 tacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||||||| ||||||||||| ||||||||| ||||||||| ||||||||||    
T  42670861 tacatggcacgtaaaatgagggaccaaaaatggaggaatttgaaattacagggaccaaaa 42670920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 13254763 - 13254801
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13254763 gactaaaaccggaattcgctaatattacagggacgaaaa 13254801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 19251793 - 19251846
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  19251793 agggactaaaaccggaattcactaatattacaaggacg-aaaagaggtatttacc 19251846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 285 - 382
Target Start/End: Complemental strand, 26560667 - 26560569
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa-nnnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||         | ||||||||||| || |||||| ||||||||||||||||||||    
T  26560667 gggaccaaaagtggaagaatctgaaattacagggactaaatctaaatctttttttacagggactaaaatcgaaattcgttaatattacagggacgaaaa 26560569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 42670771 - 42670722
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  42670771 agggactaaaaccggaattcgctactattacagggacg-aaaagaggtatt 42670722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 26135871 - 26135830
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  26135871 agggactaaaatcggaattcgctaatattacagggacgaaaa 26135830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 26560880 - 26560932
Alignment:
Q  342 gggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  26560880 gggactaaaatcggaattcgctaatattacaaggacg-aaaagaggtatttacc 26560932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 294
Target Start/End: Original strand, 13284537 - 13284609
Alignment:
Q  222 aacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||| ||||| |||||||  ||||| |||| |||||||||||||| || ||||||||||||| ||||||||||    
T  13284537 aacagaatctgcatacatgacacgtgaaatgagggaccaaaagtgaagaaatatgaaattacagggaccaaaa 13284609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 285 - 382
Target Start/End: Complemental strand, 22263304 - 22263205
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa--nnnnnnnnatagggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||          |||| |||||||||| |||||| ||||||||||||||| |||||    
T  22263304 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttcatagagactaaaaccagaattctctaatattacagggatgaaaa 22263205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 15106332 - 15106442
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnn-atagggactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    |||| ||||| ||||||||| || |||||||||||| |||||||||         | ||||||||||| || |||||||||||||||| |||||| ||||    
T  15106332 gggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatttttttttacagggactaaaatcgaaattcgctaatattacggggacg-aaaa 15106430  T
Q  384 gaggtatttacc 395  Q
    ||||||||||||    
T  15106431 gaggtatttacc 15106442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 20498989 - 20498922
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||||||||||| ||||| |||||||||||  || ||||||||| ||||||||||    
T  20498989 aatctgcatacatagcacgtaaaatgagggatcaaaagtggagtgatctgaaattacagggaccaaaa 20498922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 382
Target Start/End: Original strand, 30959997 - 30960036
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  30959997 ggactaaaaccggaattcgctaatattacagggaccaaaa 30960036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 384
Target Start/End: Complemental strand, 39878156 - 39878113
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaag 384  Q
    |||||||||||||||||||||||||||||||| |||| ||||||    
T  39878156 agggactaaaaccggaattcgctaatattacaaggacaaaaaag 39878113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 17463143 - 17463105
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  17463143 gactaaaaccggaattcgctaatattatagggacgaaaa 17463105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 320
Target Start/End: Complemental strand, 17463335 - 17463241
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaaat-ggaagaatatggaattacagggac 320  Q
    ||||| ||||||| ||| ||||||| ||||||||||| | ||||||| | ||||||| |||||||||| | ||| |||| || ||||||||||||    
T  17463335 aatctgcatacatggcatgtaaaatgagggaccaaaattagaggaatctaaaattacagggaccaaaagtgggaggaatctgaaattacagggac 17463241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 20498801 - 20498748
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||| |||||||||||||||||  |||| ||||||||||||||||    
T  20498801 agggactaaaaccgtaattcgctaatattacatagacg-aaaagaggtatttacc 20498748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 26236181 - 26236128
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||||| ||||||||    
T  26236181 agggactaaaaccagaattcgctaatattacaaggacg-aaaagagatatttacc 26236128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 33290103 - 33290061
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaa 383  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  33290103 agggactaaaactggaattcgctaatattacagggaccaaaaa 33290061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 42671043 - 42671096
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||| | |||||||||||| ||||||||| |||||||||||||||||    
T  42671043 agggactaaaactgaaattcgctaatactacagggac-aaaaagaggtatttacc 42671096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 13284737 - 13284778
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  13284737 agggactaaaaccgaaattcgctaatattacagggaccaaaa 13284778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 30958738 - 30958697
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||| |||||||||||||||||||||| ||||    
T  30958738 agggactaaaaccgaaattcgctaatattacagggaccaaaa 30958697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 33290295 - 33290226
Alignment:
Q  225 aaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||||| ||||||| || | | |||| |||||||||||||||||| || ||||||||| ||||||||||    
T  33290295 aaaatctgcatacatggctcatgaaatgagggaccaaaagtggaggtatctgaaattacagggaccaaaa 33290226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 22263309 - 22263269
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  22263309 aataagggaccaaaagtggaagaatatgaaattacagggac 22263269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 395
Target Start/End: Complemental strand, 23046763 - 23046708
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||| ||| |||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  23046763 atagagaccaaaaccggaattcgctcatattacaaggacg-aaaagaggtatttacc 23046708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 26136143 - 26136194
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||| |||||| |||||||||| ||||| ||||||||||||||||    
T  26136143 ggactaaaaccgaaattcgttaatattacaaggacg-aaaagaggtatttacc 26136194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 30390572 - 30390528
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaa 329  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||    
T  30390572 gggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 30390528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 395
Target Start/End: Original strand, 23047913 - 23047959
Alignment:
Q  348 aaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||    
T  23047913 aaaaccggaattcgctcatattacagggacg-aaaataggtatttacc 23047959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 248 - 283
Target Start/End: Complemental strand, 33290168 - 33290133
Alignment:
Q  248 aaataagggaccaaaagtggaggaatatgaaattac 283  Q
    |||||||||||||||||||||||| |||||||||||    
T  33290168 aaataagggaccaaaagtggaggagtatgaaattac 33290133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 395
Target Start/End: Complemental strand, 44097786 - 44097739
Alignment:
Q  348 aaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||  |||||||||||||||||| || ||||||||    
T  44097786 aaaaccggaattcgctcttattacagggacgaaaaatagatatttacc 44097739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 15106121 - 15106068
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||| |||||||| |||||||||||||||| |||||| ||||||| ||||||||    
T  15106121 agggattaaaaccgaaattcgctaatattacggggacg-aaaagagatatttacc 15106068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 327
Target Start/End: Original strand, 22263456 - 22263498
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatct 327  Q
    |||||||||| |||||||||||| |||||||||||| ||||||    
T  22263456 gggaccaaaagtggaagaatatgaaattacagggacaaaatct 22263498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 34548628 - 34548575
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||  ||||| ||||||||||||||||| |||||| |||||||||    
T  34548628 agggactaaaaccaaaattcactaatattacagggacg-aaaagaagtatttacc 34548575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 39878397 - 39878449
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||| ||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  39878397 agggacgaaaactggaattcgctaatattaca-ggac-aaaaagaggtatttacc 39878449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 283
Target Start/End: Complemental strand, 42670837 - 42670803
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattac 283  Q
    |||||||||||||||||||| ||||||||||||||    
T  42670837 aataagggaccaaaagtggaagaatatgaaattac 42670803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 13284461 - 13284417
Alignment:
Q  346 ctaaaaccggaattcgctaatattacagggacgaaaaagaggtatt 391  Q
    |||||||||||||||||| ||||||||||||| |||||| ||||||    
T  13284461 ctaaaaccggaattcgctgatattacagggac-aaaaagtggtatt 13284417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 330
Target Start/End: Original strand, 17850851 - 17850896
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaa 330  Q
    |||||||||| ||||||||| || |||||||||||| |||||||||    
T  17850851 gggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 17850896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 30390513 - 30390472
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||| ||||| |||||||||||||||||||| |||||||||    
T  30390513 agggattaaaatcggaattcgctaatattacatggacgaaaa 30390472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 33290371 - 33290412
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||    
T  33290371 agggattaaaaccagaattcgctaatattacagggaccaaaa 33290412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 19251584 - 19251548
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  19251584 agggaccaaaagtggaagaatatgaaattacagggac 19251548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 22263455 - 22263491
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  22263455 agggaccaaaagtggaagaatatgaaattacagggac 22263491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Original strand, 23806216 - 23806252
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  23806216 agggaccaaaagtggaagaatatgaaattacagggac 23806252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 289
Target Start/End: Complemental strand, 26560672 - 26560632
Alignment:
Q  249 aataagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||| |||| ||||||||| |||||    
T  26560672 aataagggaccaaaagtggaagaatctgaaattacagggac 26560632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 253 - 289
Target Start/End: Complemental strand, 30390573 - 30390537
Alignment:
Q  253 agggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||| |||||||||||||| |||||    
T  30390573 agggaccaaaagtggaagaatatgaaattacagggac 30390537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 329
Target Start/End: Complemental strand, 42670832 - 42670788
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaa 329  Q
    |||||||||| |||||||||||| ||||||| |||| ||||||||    
T  42670832 gggaccaaaagtggaagaatatgaaattacaaggacaaaatctaa 42670788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 391
Target Start/End: Original strand, 12248 - 12355
Alignment:
Q  286 ggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnn---atagggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    ||||||||| ||||||||| || |||||||||||| |||||||||           |||||||||||||||||||||||||||||||||||||||| |||    
T  12248 ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaaccggaattcgctaatattacagggacg-aaa 12346  T
Q  383 agaggtatt 391  Q
    |||||||||    
T  12347 agaggtatt 12355  T

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Target: scaffold0361 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 4817 - 4740
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    |||||| || ||||| ||||||| | ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  4817 acgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaa 4740  T

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Target: scaffold0361; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 395
Target Start/End: Original strand, 4828 - 4939
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnata--gggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| |||||||||||| ||||||| |||| |||||||||         ||  |||| ||||||||||||| |||||||||||||||||| |||    
T  4828 gggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttatttttacagggattaaaaccggaatttgctaatattacagggacg-aaa 4926  T
Q  383 agaggtatttacc 395  Q
    |||||||||||||    
T  4927 agaggtatttacc 4939  T

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Target: scaffold0361; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 4616 - 4563
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  4616 agggactaaaatcggaattcgctaatattacaaggacg-aaaagaggtatttacc 4563  T

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Target: scaffold0449 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 7524 - 7577
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  7524 agggactaaaaccggaattcgctaatattacagggacg-aaaataggtatttacc 7577  T

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Target: scaffold0449; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 285 - 395
Target Start/End: Complemental strand, 7339 - 7227
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnat---agggactaaaaccggaattcgctaatattacagggacgaaa 381  Q
    |||||| ||| |||||||||||| |||||||||||| |||||||||         |   ||| ||||| ||| |||||||||||||||||| ||||| ||    
T  7339 gggaccgaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaacaccagaattcgctaatattacaaggacg-aa 7241  T
Q  382 aagaggtatttacc 395  Q
    ||||||||||||||    
T  7240 aagaggtatttacc 7227  T

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Target: scaffold0185 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 395
Target Start/End: Complemental strand, 3923 - 3870
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  3923 agggactaaaaccggaattcgctaatattacagggacg-aaaagagatatttacc 3870  T

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Target: scaffold0185; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 294
Target Start/End: Original strand, 4003 - 4070
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| || |||| ||| ||||||| ||||||||||||||||||||||||||||||| | ||||||||    
T  4003 aatctgcacacatggcaagtaaaatgagggaccaaaagtggaggaatatgaaattacagtgaccaaaa 4070  T

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Target: scaffold0141 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 395
Target Start/End: Complemental strand, 8378 - 8326
Alignment:
Q  342 gggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  8378 gggactaaaaccgaaattcgctaatattacagggacg-aaaagaggtatttacc 8326  T

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Target: scaffold0141; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 8646 - 8699
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||||||||| |||| || ||||||  |||||||||    
T  8646 agggactaaaaccggaattcgctaatattgcaggaac-aaaaagcagtatttacc 8699  T

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Target: scaffold0809 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 395
Target Start/End: Original strand, 1728 - 1783
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||    
T  1728 atagggactaaaaccggaattcgttaatattacagggacg-aaaagagggatttacc 1783  T

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Target: scaffold0809; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 1654 - 1587
Alignment:
Q  227 aatctccatacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||| ||||||| ||||||||||| ||||||||||||||||| ||| |||||||||  |||||||||    
T  1654 aatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatctgaaattacaaggaccaaaa 1587  T

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Target: scaffold0881 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 294
Target Start/End: Original strand, 360 - 421
Alignment:
Q  233 catacattgcacgtaaaataagggaccaaaagtggaggaatatgaaattactgggaccaaaa 294  Q
    ||||||| | ||||||||| ||||||||||||| ||||||| ||||||||| ||||||||||    
T  360 catacatggtacgtaaaatgagggaccaaaagtagaggaatctgaaattacagggaccaaaa 421  T

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Target: scaffold0477 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 4932 - 4881
Alignment:
Q  343 ggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||| ||||||||||||||||||| || |||||||||||||||||    
T  4932 ggactaaaaccgaaattcgctaatattacaggaac-aaaaagaggtatttacc 4881  T

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Target: scaffold0477; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 5002 - 4935
Alignment:
Q  217 acgtaaacaaaatctccatacattgcacgtaaaataagggaccaaaagt-ggaggaatatgaaattac 283  Q
    |||||| || ||||| ||||||| ||||||||||| ||||||||||||| |||| |||||||||||||    
T  5002 acgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtgggagaaatatgaaattac 4935  T

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Target: scaffold0477; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 285 - 382
Target Start/End: Original strand, 5013 - 5112
Alignment:
Q  285 gggaccaaaaatggaagaatatggaattacagggactaaatctaaannnnnnnnatag--ggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||| ||||||||| |  ||||||||||||||||||||||         ||   |||| ||||||||||||||||||||||||| |||||||||    
T  5013 gggaccaaaagtggaagaatctaaaattacagggactaaatctaaatattttttttactaggacaaaaaccggaattcgctaatattacatggacgaaaa 5112  T

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Target: scaffold0352 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 395
Target Start/End: Complemental strand, 4723 - 4668
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    |||||||||||||| |||||||||||||||| |||||||  ||||||||||||||||    
T  4723 atagggactaaaactggaattcgctaatattgcagggac-taaaagaggtatttacc 4668  T

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Target: scaffold0352; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 6003 - 6056
Alignment:
Q  341 agggactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||| ||||||||||||||||| |||||||  ||||||||||||||||    
T  6003 agggactaaaatcggaattcgctaatattgcagggac-caaaagaggtatttacc 6056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 289
Target Start/End: Complemental strand, 4782 - 4745
Alignment:
Q  252 aagggaccaaaagtggaggaatatgaaattactgggac 289  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  4782 aagggaccaaaagtggaggaatctgaaattacagggac 4745  T

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Target: scaffold0176 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 395
Target Start/End: Original strand, 15955 - 16005
Alignment:
Q  344 gactaaaaccggaattcgctaatattacagggacgaaaaagaggtatttacc 395  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||    
T  15955 gactaaaaccggaattcgctaatattacatggacg-aaaagagatatttacc 16005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 224 - 267
Alignment:
Q  339 atagggactaaaaccggaattcgctaatattacagggacgaaaa 382  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||    
T  224 atagggactaaaactggaattcgctaatattatagggactaaaa 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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