View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7594_high_2 (Length: 390)
Name: NF7594_high_2
Description: NF7594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7594_high_2 |
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Alignment Details
Target: chr4 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 136 - 372
Target Start/End: Original strand, 41824943 - 41825179
Alignment:
| Q |
136 |
ccgtcaccgcttcattgttttcacaagcttgaactatataagcagcatactagtatatcagtgtagtaccaaaatcaaagaaaaacaacgaaagtgtgtg |
235 |
Q |
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| T |
41824943 |
ccgtcaccgcttcattgttttcacaagcttgaactatataagcagcatactagtatatcagtgtagtaccaaaatcaaagaaaaacaacgaaagtgtgtg |
41825042 |
T |
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| Q |
236 |
tcaggttcacaccattcaccatgtcattatcaaaatcaaaagctctattcttcatctttaaaatattgatgttgaatttcataacaccaatgatacatgc |
335 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41825043 |
tcaggttcacaccattcaccatgtcattatcaaaatcaaaagctctattcttcatctttaaaatattgatgttgaatttcataacaccaatgatacatgc |
41825142 |
T |
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| Q |
336 |
atgtggtccatgcactcagccaaatccaccaccttac |
372 |
Q |
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| T |
41825143 |
atgtggtccatgcactcagccaaatccaccaccttac |
41825179 |
T |
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