View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7595_high_15 (Length: 394)
Name: NF7595_high_15
Description: NF7595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7595_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 8944450 - 8944793
Alignment:
| Q |
1 |
aattggcttatgattttgtgaagttcttttaaataggtatgtcaaattatgaatatttcaaatgttacatgacgtcgttttaatgttactcacattcatc |
100 |
Q |
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| T |
8944450 |
aattggcctatgattttgtgaagttcttttaaataggtatgtcaaattatgaatatttcaaatgttacatgacgtcgttttaatgttactcacattcatc |
8944549 |
T |
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| Q |
101 |
cttttgtcgaacttagttgcttaacatcgttttactgggacgaaattgataataagtagtaaaatataagtatgtaaacgaaacgtgataacatgaaagt |
200 |
Q |
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| T |
8944550 |
cttttgtcaaacttagtttcttagcatctttttcctgagacgaaattgatactaagtggttaaatataaggatgtaagcgaaacgtgttaacgataaagt |
8944649 |
T |
|
| Q |
201 |
ttgacagaaatatagatatgagtaatgtttcaccgagtaagaggcgtatttgaaatattcataatctcatggaccatttgaaagcgcaataaattacatg |
300 |
Q |
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|||||||||| |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8944650 |
ttgacagaaagatagatatgatcaatgtttcaccgagtaagagacgtatttaaaatattcataatctcatggaccatttgaaagcgcaataaattacatg |
8944749 |
T |
|
| Q |
301 |
gataaatttggtggtttcctttgattatatctaattgagtttat |
344 |
Q |
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|||| ||||||||||||||||| ||| ||||||||||||||||| |
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| T |
8944750 |
gatacatttggtggtttcctttcattgtatctaattgagtttat |
8944793 |
T |
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