View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7595_low_21 (Length: 318)
Name: NF7595_low_21
Description: NF7595
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7595_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 299
Target Start/End: Complemental strand, 36694057 - 36693773
Alignment:
| Q |
13 |
aatatcaaaagattggaaacctatcaaggcaatgtgcatatcggattgatgccctaaatggcttccttaacaacttcactaaggtactaattgacatgat |
112 |
Q |
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| T |
36694057 |
aatatcaaaagattggaaacctatcaaggcaatgtgcatatcggattgatgcccttaatggtttccttaacaacttcactaaggtactaattaacatgat |
36693958 |
T |
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| Q |
113 |
atatttttattgtaaagtttagtatttcttggagaaattaatgacttattttttaatatgttaaacnnnnnnnatagacaccaaaggaaatcaaaagcaa |
212 |
Q |
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| T |
36693957 |
at--ttttattgcaaagttcagtattttttgtagaaattaatgacttatattttaatatgttacactttttttatagacaccaaaggaaatcaaaagcaa |
36693860 |
T |
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| Q |
213 |
aatacaagaaccatgcattaagatgagcatggaaactggaaaagctttaaagcaattatcaatatcaatccacaaaatggttccacc |
299 |
Q |
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| T |
36693859 |
aatacaagaaccatgcattaagatgagcatggaaactggaaaagctttaaagcaattatcaatatcaatccacaaaatggctccacc |
36693773 |
T |
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