View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7596_high_11 (Length: 274)
Name: NF7596_high_11
Description: NF7596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7596_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 43472081 - 43472328
Alignment:
| Q |
17 |
aattcaatctttgaactcatttagatcttccatattagtactcaagacaataagnnnnnnnggtaagcattatgcatattttatatatcatttctagtat |
116 |
Q |
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| T |
43472081 |
aattcaatctttgaactcatttagatcttccatattagtactcaagacaataagttttttaggtaagcattatgcatattttatatatcatttctagtat |
43472180 |
T |
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| Q |
117 |
ctgtgagttttgaatttctacatttatgtttagtttacagatgca-tttgtatttcttatattgtgtgcttttttaactgtatagtgcttaatttagtga |
215 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
43472181 |
ctgtgagttttgaatttctacatttatgtttggtttacagatgccgtttgtatttcttatattgtgtgctttttttactgtatagtgcttaatttagtga |
43472280 |
T |
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| Q |
216 |
attatgtgtttagaaaacttagatcaagtgaatcttatttatgttcat |
263 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43472281 |
attatgtgtttagaaaacttagatcaagtgaatcttatttatgttcat |
43472328 |
T |
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