View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7598_low_3 (Length: 279)
Name: NF7598_low_3
Description: NF7598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7598_low_3 |
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Alignment Details
Target: chr1 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 42 - 262
Target Start/End: Original strand, 26217609 - 26217829
Alignment:
| Q |
42 |
ttcgattatgttgtgtgtttgaattatggattactccgtcattgttaatagaagtgtagtggaccctatcatacttgcaagaggtcttcaacaaggggac |
141 |
Q |
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| T |
26217609 |
ttcgattatgttgtgtgtttgaattatggattactccgtcattgttaatagaagtgtagtggaccctgtcatacttgcaagaggtcttcaacaaggggac |
26217708 |
T |
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| Q |
142 |
cctttcttatgggtttctttatgatgaaggcttatcagccctgattagaaaggagaaattcacggagtctaaatatgtactaatgatctaattatctctc |
241 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26217709 |
cctttcttatgggtttctttatgatgaaggtttatcagccctgattagaaaggagaaattcacggagtctaaatatgtactaatgatctaattatctctc |
26217808 |
T |
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| Q |
242 |
atcttctatttgtagattact |
262 |
Q |
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||||||||||||||||||||| |
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| T |
26217809 |
atcttctatttgtagattact |
26217829 |
T |
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