View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7601_low_3 (Length: 266)
Name: NF7601_low_3
Description: NF7601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7601_low_3 |
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Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 46126601 - 46126350
Alignment:
| Q |
1 |
caactagtttgatgaacttgaacaatcctactagctttgaaaggaatgccaaacagtcttgagatcttgtaatcagtcatagcggaggagcctttcacaa |
100 |
Q |
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| T |
46126601 |
caactagtttgatgaacttgaacaatcctactagctttgaaaggaatgccaaacagtcttgagatcttgtaatcagtcatagcggaggagcctttcacaa |
46126502 |
T |
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| Q |
101 |
tagccatatcaaaactaagctgaacttctgctatgatgctgtgaaacaaggtggccatggacttgtactgattattgaaatatctggcatttctctccaa |
200 |
Q |
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| T |
46126501 |
tatccatatcaaaactaagctgaacttctgctatgatgctgtgaaacaaggtggccatggacttgtactgattattgaaatatctggcatttctctccaa |
46126402 |
T |
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| Q |
201 |
ccatatactccatatagtatgaataatatcagtgttcataacctgctgcaca |
252 |
Q |
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| T |
46126401 |
ccatatactccatatagtatgaataatatcagtgttcataacctgctgcaca |
46126350 |
T |
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