View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7603_low_14 (Length: 214)
Name: NF7603_low_14
Description: NF7603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7603_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 42 - 195
Target Start/End: Original strand, 39373185 - 39373338
Alignment:
| Q |
42 |
cacacacgcaggctatatttcatccacatgctaagtgccgacatcactcaccatcctttgtctggttataggaattcccttccaaactctatggttacaa |
141 |
Q |
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| T |
39373185 |
cacacacgcaggctatatttcatccacatgctaagtgccgacatcactcaccatcctttgtctggttataggaattcccttccaaactctatggttacaa |
39373284 |
T |
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| Q |
142 |
tctaatgcacatattaactagaccttttgaattatataaataacatcttcgttg |
195 |
Q |
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| T |
39373285 |
tctaatgcacatattaactagaccttttgaattatataaataacgtcttcgttg |
39373338 |
T |
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