View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7603_low_4 (Length: 339)
Name: NF7603_low_4
Description: NF7603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7603_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 321
Target Start/End: Complemental strand, 36374031 - 36373708
Alignment:
| Q |
10 |
ggtgttaaaggaagactgtgattgttcccctgcatacgcctgacctgaaattttccattatttgaacttattttacagtccagtacaaaataacagtcga |
109 |
Q |
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| T |
36374031 |
ggtgttaaaggaagactgtgattgttcccctgcatacgcctgacctgaaattttccattatttgaacttattttacagtccagtacaaaataacagtcga |
36373932 |
T |
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| Q |
110 |
taatgttcaatctatgaagcactgaca------------cagacgtcagacacaatactggtacaaattttgaaaaattgaagtaatcacacgtgccgtg |
197 |
Q |
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| T |
36373931 |
taatgtttaatctatgaagcactgacagagacactgacacagacgtcagacacaatattggtacaaattttgaaaaattgaagtaatcacacttgccgtg |
36373832 |
T |
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| Q |
198 |
tccgtgctccagagtgttcaatcatattctcaaagaaacacatcaatagttgcattgcaccactctaaaaataagtttggtacattattttcataagttt |
297 |
Q |
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| T |
36373831 |
tccgtgctccagagtgttcaatcatattctcaaagaaacacatcaatagttgcattgcaccactctaaaaataagtttggtacattattttcataagttt |
36373732 |
T |
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| Q |
298 |
ctgtcacgttcaaattcaaattgc |
321 |
Q |
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| T |
36373731 |
ctgtcacgttcaaattcaaattgc |
36373708 |
T |
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