View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7605_low_6 (Length: 509)
Name: NF7605_low_6
Description: NF7605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7605_low_6 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 305; Significance: 1e-171; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 9 - 345
Target Start/End: Original strand, 4359466 - 4359802
Alignment:
| Q |
9 |
gattatacttcccggctttataggatgctttgctttggtcatttatatttcacagggaactaaagctgttgaggggctgagtttgaagctgccaggtcat |
108 |
Q |
| |
|
||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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|
| T |
4359466 |
gattatacttctcggctttataggatgttttactttggtcatttatatttcacagggaactaaagctgttgaggggctgagtttgaagctgccaggtcgt |
4359565 |
T |
|
| Q |
109 |
agtgcacaacgttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatcttt |
208 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4359566 |
agtgcacaacgttttagcaccaaaacatttgagaacatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatcttt |
4359665 |
T |
|
| Q |
209 |
caagaaaattgagatggctgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacag |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4359666 |
caagaaaattgagatggctgcagtggaatggatttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacag |
4359765 |
T |
|
| Q |
309 |
caatatcagacttttgtggaaagagatgcaggtatta |
345 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4359766 |
caatatcagacttgtgtggaaagagatgcaggtatta |
4359802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 27 - 345
Target Start/End: Original strand, 4344028 - 4344346
Alignment:
| Q |
27 |
tataggatgctttgctttggtcatttatatttcacagggaactaaagctgttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagc |
126 |
Q |
| |
|
||||||||| ||| |||||||| ||||||||||||||||||| ||||||||||| || |||| ||| ||| ||||||||| |||| ||||||||||||| |
|
|
| T |
4344028 |
tataggatgttttactttggtcttttatatttcacagggaacaaaagctgttgaaggactgacttttaagatgccaggtcgtagtacacaacgttttagt |
4344127 |
T |
|
| Q |
127 |
accaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggc |
226 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
4344128 |
accaaagcatttgagaacatgaagaaacttagattgctgcaactttctggtgtacaacttgatggagattttaaatatctttcaagaaatttgagatggc |
4344227 |
T |
|
| Q |
227 |
tgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcagacttttgtg |
326 |
Q |
| |
|
| || |||||||| ||||| ||| |||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||| | ||| |||| |||| |
|
|
| T |
4344228 |
tacactggaatggatttccgttagcatgcataccttcaaacttctatcaaagaaatatagtttccattgagttagaaaacagcagtgtcaaacttgtgtg |
4344327 |
T |
|
| Q |
327 |
gaaagagatgcaggtatta |
345 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
4344328 |
gaaagagatgcaggtatta |
4344346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 42 - 345
Target Start/End: Original strand, 4352322 - 4352625
Alignment:
| Q |
42 |
tttggtcatttatatttcacagggaactaaagctgttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagcaccaaagcatttgag |
141 |
Q |
| |
|
||||||| |||||||||| |||||||| |||| |||||| || |||| ||| ||| ||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
4352322 |
tttggtcctttatatttctcagggaacaaaagttgttgaaggactgacttttaagatgccaggtcgtagtgcacaacgttttagtaccaaagcatttgag |
4352421 |
T |
|
| Q |
142 |
aatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagtggaatgggt |
241 |
Q |
| |
|
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| |||||||| | |
|
|
| T |
4352422 |
aacatgaagaaactcagattgctgcaactttctggtgtacaacttgatggagattttaaatatctttcaagaaatttgaaatggctgcactggaatggat |
4352521 |
T |
|
| Q |
242 |
ttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcagacttttgtggaaagagatgcaggt |
341 |
Q |
| |
|
||||||||||||| ||| | |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||| | ||||||||||||||||| |
|
|
| T |
4352522 |
ttcctttaacatgtatagcttcaaacttctatcaaagaaatttagtttccgttgtgttagaaaacagcaatgtcaaacttgtttggaaagagatgcaggt |
4352621 |
T |
|
| Q |
342 |
atta |
345 |
Q |
| |
|
|||| |
|
|
| T |
4352622 |
atta |
4352625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 62 - 345
Target Start/End: Complemental strand, 4125383 - 4125100
Alignment:
| Q |
62 |
agggaactaaagctgttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagcaccaaagcatttgagaatatgaagaaactcagatt |
161 |
Q |
| |
|
||||||| |||||||||||||| |||| ||||||||||||||| | |||||||||||||||||||||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
4125383 |
agggaacaaaagctgttgagggactgactttgaagctgccaggacgtagtgcacaacgttttagcaccgaagcatttaagaagatgaagaaactcagatt |
4125284 |
T |
|
| Q |
162 |
gctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagtggaatgggtttcctttaacatgcataccg |
261 |
Q |
| |
|
||| |||||||| |||| |||||||||||||||||||||| ||||||||| | ||||||||||||| || |||||||| |||||||||||||||||||| |
|
|
| T |
4125283 |
gcttcaactttctggtgcacaacttgatggagattttaaatatctttcaaaacaattgagatggctacactggaatggatttcctttaacatgcatacct |
4125184 |
T |
|
| Q |
262 |
tcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcagacttttgtggaaagagatgcaggtatta |
345 |
Q |
| |
|
||||||||||||||||||||| | |||||||||| ||||||||| |||||| ||| |||| ||||||||||||||||||||||| |
|
|
| T |
4125183 |
tcaaacttctatcaaagaaatattgtttccattgagttagaaaatagcaatgtcaaacttgtgtggaaagagatgcaggtatta |
4125100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 44 - 345
Target Start/End: Complemental strand, 4321995 - 4321694
Alignment:
| Q |
44 |
tggtcatttatatttcacagggaactaaagctgttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagcaccaaagcatttgagaa |
143 |
Q |
| |
|
||||| ||||||||||| ||||||| |||||||||||||| |||| ||||||| ||||| |||||||||||||||| ||||| || ||| |||||||||| |
|
|
| T |
4321995 |
tggtcctttatatttcatagggaacaaaagctgttgagggactgactttgaagatgccatgtcatagtgcacaacgatttagtactaaaacatttgagaa |
4321896 |
T |
|
| Q |
144 |
tatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagtggaatgggttt |
243 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| || | ||||||||| |||||||| ||| |
|
|
| T |
4321895 |
catgaagaaactcagattgctgcaactttctggtgtacaacttgatggagattttaaatatatttcaagaaatttaaaatggctgcactggaatggattt |
4321796 |
T |
|
| Q |
244 |
cctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcagacttttgtggaaagagatgcaggtat |
343 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||| | |||| ||||||||||||| ||||||| |
|
|
| T |
4321795 |
cctttaagatgcataccttcaaacttctatcaaagaaatatagtttccattgagttagaaaacagcaatgctaaacttgtgtggaaagagattcaggtat |
4321696 |
T |
|
| Q |
344 |
ta |
345 |
Q |
| |
|
|| |
|
|
| T |
4321695 |
ta |
4321694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 42 - 345
Target Start/End: Original strand, 4334585 - 4334888
Alignment:
| Q |
42 |
tttggtcatttatatttcacagggaactaaagctgttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagcaccaaagcatttgag |
141 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||| |||||||||||| || |
|
|
| T |
4334585 |
tttggtcctttatatttcacagggaacaaaaactgttgagggattgactttgaagctgccaggtcgtagtgcacaacgttttagtaccaaagcatttaag |
4334684 |
T |
|
| Q |
142 |
aatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagtggaatgggt |
241 |
Q |
| |
|
|| |||||||||||||||||||| |||||||| || | |||||||||||||||||||||| ||||||| ||||| |||||||||||||| |||||||| | |
|
|
| T |
4334685 |
aagatgaagaaactcagattgcttcaactttctggcgcacaacttgatggagattttaaatatctttccagaaagttgagatggctgcactggaatggat |
4334784 |
T |
|
| Q |
242 |
ttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcagacttttgtggaaagagatgcaggt |
341 |
Q |
| |
|
||||||||||||||||||| ||||| ||| |||||||||| |||||||||||| |||||||||||||||| ||| |||| | ||| || |||||||||| |
|
|
| T |
4334785 |
ttcctttaacatgcataccttcaaagttccgtcaaagaaatatagtttccattgagttagaaaacagcaatgtcaaacttgtatggcaacagatgcaggt |
4334884 |
T |
|
| Q |
342 |
atta |
345 |
Q |
| |
|
|||| |
|
|
| T |
4334885 |
atta |
4334888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 119 - 316
Target Start/End: Complemental strand, 4134712 - 4134515
Alignment:
| Q |
119 |
gttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaatt |
218 |
Q |
| |
|
||||||| ||||| ||||||||||| ||||||||||| |||||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
4134712 |
gttttagtaccaatgcatttgagaacatgaagaaactgagattgcttcaaccttctggtgtacaacttgatggagattttaaatatctttcaagaaattt |
4134613 |
T |
|
| Q |
219 |
gagatggctgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatca |
316 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||| || || ||||||| || ||||||||||||||||||||| | ||||||||| |||||||| |
|
|
| T |
4134612 |
gagatggctgtgttggaatgaatttcctttaacattgatgcccacaaacttttaccaaagaaatttagtttccattcagctagaaaacaacaatatca |
4134515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 442 - 493
Target Start/End: Original strand, 4359872 - 4359923
Alignment:
| Q |
442 |
tgcgtcccgtttgcaatagtaatagaaggactggagtcctagatatcatatc |
493 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4359872 |
tgcgtcccgtttgcaatagtaatagaaggactggagtcctagatatcatatc |
4359923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 410 - 483
Target Start/End: Complemental strand, 4125035 - 4124962
Alignment:
| Q |
410 |
agtgttgcatccagagtggacttttgggcaagtgcgtcccgtttgcaatagtaatagaaggactggagtcctag |
483 |
Q |
| |
|
|||||||| ||||||||| |||||||| |||||| |||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
4125035 |
agtgttgcgtccagagtgcacttttggtcaagtgtgtcccgttcgcaatagtaatagaaggattggagtcctag |
4124962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 6623347 - 6623264
Alignment:
| Q |
127 |
accaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttca |
210 |
Q |
| |
|
|||||||||||| |||| ||||| |||||||||||||| ||||||||||| || || ||| |||||||||||||| | |||||| |
|
|
| T |
6623347 |
accaaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttca |
6623264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 6499212 - 6499138
Alignment:
| Q |
127 |
accaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaa |
201 |
Q |
| |
|
|||||||||||| |||| ||||| |||||||||||||| ||||||||||| || || ||| |||||||||||||| |
|
|
| T |
6499212 |
accaaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaa |
6499138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 6650164 - 6650247
Alignment:
| Q |
127 |
accaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttca |
210 |
Q |
| |
|
||||||||||| |||| ||||| |||||||||||||| ||||||||||| || || ||| |||||||||||||| | |||||| |
|
|
| T |
6650164 |
accaaagcattcaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttca |
6650247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 6757493 - 6757576
Alignment:
| Q |
127 |
accaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttca |
210 |
Q |
| |
|
|||||||||||| |||| ||||| |||||||||||||| |||||| || ||||| ||| |||||||||||||| |||||||| |
|
|
| T |
6757493 |
accaaagcatttaagaagatgaataaactcagattgctacaacttgttggggtacagcttaatggagattttaaatatctttca |
6757576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 6675102 - 6675185
Alignment:
| Q |
127 |
accaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttca |
210 |
Q |
| |
|
|||||||||| | |||| ||||| |||||||| ||||| ||||||||||| || || ||| |||||||||||||| | |||||| |
|
|
| T |
6675102 |
accaaagcatctaagaagatgaataaactcaggttgcttcaactttccggggttcagcttaatggagattttaaatacctttca |
6675185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 251
Target Start/End: Complemental strand, 6533596 - 6533478
Alignment:
| Q |
133 |
gcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagt |
232 |
Q |
| |
|
|||||| |||| ||||| || ||||||||||| |||||| | ||||| ||||| |||||||||||||| |||||||||| | | ||||||||| | | |
|
|
| T |
6533596 |
gcatttaagaagatgaataagctcagattgcttcaacttgctggtgtgcaactgaatggagattttaaatgtctttcaagagatcttagatggctgtact |
6533497 |
T |
|
| Q |
233 |
ggaatgggtttcctttaac |
251 |
Q |
| |
|
|| |||| ||||| ||||| |
|
|
| T |
6533496 |
ggcatggatttccattaac |
6533478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 113; Significance: 5e-57; HSPs: 21)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 53 - 345
Target Start/End: Complemental strand, 5074711 - 5074419
Alignment:
| Q |
53 |
atatttcacagggaactaaagctgttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagcaccaaagcatttgagaatatgaagaa |
152 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| || ||||||| ||||| | | | |||| || ||||||| || ||||||||| |||| ||| | || |
|
|
| T |
5074711 |
atatttcacagggaacaaaagttgttgagggattggctttgaagttgccaagagaaaatgcaaaatgttttagtactaaagcatttaagaagatggaaaa |
5074612 |
T |
|
| Q |
153 |
actcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagtggaatgggtttcctttaaca |
252 |
Q |
| |
|
||| ||||||| |||||| | ||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||| |
|
|
| T |
5074611 |
acttcgattgcttcaacttgctggtgtacaacttgatggggattttgaacatctttcaagaaatttgagatggctttcatggaatggatttcctttaaca |
5074512 |
T |
|
| Q |
253 |
tgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcagacttttgtggaaagagatgcaggtatta |
345 |
Q |
| |
|
||||| || |||| ||| |||||| |||||||||||||||||| ||||| |||||||||||||| |||| |||||||| ||| ||||||||| |
|
|
| T |
5074511 |
tgcattccttcaagcttttatcaaggaaatttagtttccattgagttagtaaacagcaatatcaaacttgtgtggaaaaagacccaggtatta |
5074419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 62 - 312
Target Start/End: Original strand, 5175928 - 5176178
Alignment:
| Q |
62 |
agggaactaaagctgttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagcaccaaagcatttgagaatatgaagaaactcagatt |
161 |
Q |
| |
|
||||||| |||||||||||||| ||| ||||||| ||||| | ||||||| || ||| ||| || |||||||||||||| |||||||||||||| || |
|
|
| T |
5175928 |
agggaacaaaagctgttgagggattgactttgaagttgccaagagatagtgcgaaatgttatagtactaaagcatttgagaacatgaagaaactcaggtt |
5176027 |
T |
|
| Q |
162 |
gctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagtggaatgggtttcctttaacatgcataccg |
261 |
Q |
| |
|
||| |||||| | ||||| ||||||||||| |||||| | ||||||||||||| |||||||||| |||||||| ||||||||| ||||||| || |
|
|
| T |
5176028 |
gcttcaacttgctggtgtgcaacttgatggggattttgagtatctttcaagaaatctgagatggctttcttggaatggatttcctttatcatgcattcct |
5176127 |
T |
|
| Q |
262 |
tcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaat |
312 |
Q |
| |
|
|||| ||| |||||| |||||||||||||||| | |||||||||||||||| |
|
|
| T |
5176128 |
tcaagcttttatcaaggaaatttagtttccatcgagttagaaaacagcaat |
5176178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 62 - 312
Target Start/End: Original strand, 5277755 - 5278005
Alignment:
| Q |
62 |
agggaactaaagctgttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagcaccaaagcatttgagaatatgaagaaactcagatt |
161 |
Q |
| |
|
||||||| |||||||||||||| ||| ||||||| ||||| | ||||||| || ||| ||| || |||||||||||||| |||||||||||||| || |
|
|
| T |
5277755 |
agggaacaaaagctgttgagggattgactttgaagttgccaagagatagtgcgaaatgttatagtactaaagcatttgagaacatgaagaaactcagttt |
5277854 |
T |
|
| Q |
162 |
gctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagtggaatgggtttcctttaacatgcataccg |
261 |
Q |
| |
|
||| |||||| | ||||| ||||||||||| |||||| | ||||||||||||| |||||||||| |||||||| ||||||||| ||||||| || |
|
|
| T |
5277855 |
gcttcaacttgctggtgtgcaacttgatggggattttgagtatctttcaagaaatctgagatggctttcttggaatggatttcctttatcatgcattcct |
5277954 |
T |
|
| Q |
262 |
tcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaat |
312 |
Q |
| |
|
|||| ||| |||||| |||||||||||||||| | |||||||||||||||| |
|
|
| T |
5277955 |
tcaagcttttatcaaggaaatttagtttccatcgagttagaaaacagcaat |
5278005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 118 - 334
Target Start/End: Original strand, 5342753 - 5342969
Alignment:
| Q |
118 |
cgttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaat |
217 |
Q |
| |
|
|||||||| || ||||||||||| || ||||| ||||| |||||||| |||||||| || ||||||||||||||||||||| | ||||||| |||||| |
|
|
| T |
5342753 |
cgttttagaactaaagcatttgaaaagatgaataaactaagattgcttcaactttctggcgtacaacttgatggagattttgactatctttctagaaaac |
5342852 |
T |
|
| Q |
218 |
tgagatggctgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcag |
317 |
Q |
| |
|
| |||||||| |||||||| |||||||||| ||||||||| |||||| ||||| |||||||||||||||| | ||| |||||||||| | ||| |
|
|
| T |
5342853 |
taagatggctatgttggaatggatttcctttaagatgcatacctaaaaactttgatcaaggaaatttagtttccatggagtttgaaaacagcagtgtcaa |
5342952 |
T |
|
| Q |
318 |
acttttgtggaaagaga |
334 |
Q |
| |
|
|||| |||||||||||| |
|
|
| T |
5342953 |
acttctgtggaaagaga |
5342969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 62 - 345
Target Start/End: Original strand, 5432474 - 5432757
Alignment:
| Q |
62 |
agggaactaaagctgttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagcaccaaagcatttgagaatatgaagaaactcagatt |
161 |
Q |
| |
|
||||||| |||||| ||||||| ||| ||||||| ||||| | |||||||| || ||| ||| || |||||| |||| ||||||||||||||||| |
|
|
| T |
5432474 |
agggaacaaaagctattgagggattgactttgaagttgccaagagatagtgcaaaatgttatagtactgttgcatttaagaagatgaagaaactcagatt |
5432573 |
T |
|
| Q |
162 |
gctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagtggaatgggtttcctttaacatgcataccg |
261 |
Q |
| |
|
||| ||||| | ||||| || |||||||| ||||| |||||||||||||||| |||||||||| |||||||| ||||| ||| |||||||||| |
|
|
| T |
5432574 |
gcttgaacttgctggtgtgcagcttgatgggaattttgaacatctttcaagaaatctgagatggctttcttggaatggatttccgttatcatgcatacct |
5432673 |
T |
|
| Q |
262 |
tcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcagacttttgtggaaagagatgcaggtatta |
345 |
Q |
| |
|
||||||| |||||| ||||||||||||||| | |||||||||||| ||| ||| | |||||||||||||| ||||||||| |
|
|
| T |
5432674 |
acaaacttttatcaagcaaatttagtttccatcgagttagaaaacagtaatgtcaaagatttgtggaaagagacccaggtatta |
5432757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 42 - 345
Target Start/End: Original strand, 5382658 - 5382961
Alignment:
| Q |
42 |
tttggtcatttatatttcacagggaactaaagctgttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagcaccaaagcatttgag |
141 |
Q |
| |
|
|||||||| |||||||||| ||||||| |||||||||||||| || ||||||| | ||| |||| || || |||||| ||| ||| ||||| || |
|
|
| T |
5382658 |
tttggtcaattatatttcatagggaacaaaagctgttgagggtctagctttgaagttaccaataactagttcaaaatgttttaacactaaaacatttaag |
5382757 |
T |
|
| Q |
142 |
aatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagtggaatgggt |
241 |
Q |
| |
|
|| ||| | | ||| |||||||| |||||| | || |||||||||||||||||||| || |||||||| ||||| | ||||| ||| ||||| || | |
|
|
| T |
5382758 |
aagatggaaagactaagattgcttcaacttgctggagtacaacttgatggagatttcaagtatctttcaggaaaactaagatgactgtgttggaaaggat |
5382857 |
T |
|
| Q |
242 |
ttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcagacttttgtggaaagagatgcaggt |
341 |
Q |
| |
|
|||||||| ||| |||||| |||||||| | ||||||||||||||||||||| | |||||||||||| || || | | | |||||||||||| ||||| |
|
|
| T |
5382858 |
ttcctttatcattcataccttcaaacttttgtcaaagaaatttagtttccatagagttagaaaacagtaaaatgatatctgtgtggaaagagacccaggt |
5382957 |
T |
|
| Q |
342 |
atta |
345 |
Q |
| |
|
|||| |
|
|
| T |
5382958 |
atta |
5382961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 119 - 345
Target Start/End: Complemental strand, 5147828 - 5147602
Alignment:
| Q |
119 |
gttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaatt |
218 |
Q |
| |
|
||||||| || ||||||||| |||| |||| | ||| |||||||| |||||| | || |||||||||||||| |||||| || | |||| ||||| | |
|
|
| T |
5147828 |
gttttagtactaaagcatttaagaagatgacaagactgagattgcttcaacttactggagtacaacttgatggggattttgaatacatttcgagaaatct |
5147729 |
T |
|
| Q |
219 |
gagatggctgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcaga |
318 |
Q |
| |
|
||||||||| |||||||| |||||| ||||||||||||| ||| ||| |||| | |||||||||||||||||| ||||||||| |||||||||| | |
|
|
| T |
5147728 |
gagatggctttcttggaatggatttcctctaacatgcatacccacaagcttttatctaggaaatttagtttccattgagttagaaaatagcaatatcaaa |
5147629 |
T |
|
| Q |
319 |
cttttgtggaaagagatgcaggtatta |
345 |
Q |
| |
|
||| |||||||||| | ||||||||| |
|
|
| T |
5147628 |
cttctgtggaaagaaacccaggtatta |
5147602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 121 - 312
Target Start/End: Original strand, 5396182 - 5396373
Alignment:
| Q |
121 |
tttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattga |
220 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||||| |||| |||||| | ||| ||||||||||||| |||||| || ||||||||||||| ||| |
|
|
| T |
5396182 |
tttagtaccaaagcattcaagaagatgaaaaaactcagactgcttcaacttgctggtttacaacttgatggtgattttgaatatctttcaagaaatgtga |
5396281 |
T |
|
| Q |
221 |
gatggctgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaat |
312 |
Q |
| |
|
||||||| ||||||| |||||||||| |||||| || |||| ||| ||||| | |||||||||||||||| ||||| |||||||||| |
|
|
| T |
5396282 |
gatggctttcttggaatgcatttcctttaaaatgcattccttcaagcttttatcaggggaatttagtttccattgagttagtaaacagcaat |
5396373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 5369471 - 5369583
Alignment:
| Q |
116 |
aacgttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaa |
215 |
Q |
| |
|
||||||||||||| |||||||| |||| ||||| |||||||||||||| |||||| | || ||| ||||||||||||||||| || ||||||| ||||| |
|
|
| T |
5369471 |
aacgttttagcactaaagcattcaagaagatgaacaaactcagattgctccaacttgctggggtaaaacttgatggagattttgaatatctttccagaaa |
5369570 |
T |
|
| Q |
216 |
attgagatggctg |
228 |
Q |
| |
|
||||||||||| |
|
|
| T |
5369571 |
tctgagatggctg |
5369583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 76 - 311
Target Start/End: Complemental strand, 5691084 - 5690849
Alignment:
| Q |
76 |
gttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccg |
175 |
Q |
| |
|
|||||||| |||||||||||| ||||| | || || |||| |||||| || ||||||||||||| ||| | ||||| |||||| | |||||| | | |
|
|
| T |
5691084 |
gttgagggactgagtttgaagttgccaagagctaatgtacaatgttttaatactgaagcatttgagaagatggaaaaactgagattgtttcaacttgctg |
5690985 |
T |
|
| Q |
176 |
gtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatca |
275 |
Q |
| |
|
| ||| |||||||||| ||||| | | ||||||| ||| |||||||| | ||| |||| ||||||||||||| ||| || |||| ||| ||||| |
|
|
| T |
5690984 |
gagtagaacttgatgggaattttgataaactttcaaaaaatctgagatggttttcttgggatggatttcctttaacatccatcccttcaagcttttatca |
5690885 |
T |
|
| Q |
276 |
aagaaatttagtttccattgtgttagaaaacagcaa |
311 |
Q |
| |
|
| |||||||||||||| ||| ||||||||||||||| |
|
|
| T |
5690884 |
aggaaatttagtttcccttgagttagaaaacagcaa |
5690849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 333
Target Start/End: Original strand, 5095158 - 5095372
Alignment:
| Q |
119 |
gttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaatt |
218 |
Q |
| |
|
||||||| || |||||||| |||| |||| || |||||||||||| |||||| | || || ||||||||||||||||| || ||||||| ||||| | |
|
|
| T |
5095158 |
gttttagtactaaagcattcaagaagatgacgagactcagattgcttcaacttgctggggttaaacttgatggagattttgaatatctttcgagaaatct |
5095257 |
T |
|
| Q |
219 |
gagatggctgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcaga |
318 |
Q |
| |
|
|||||||||| |||||||| ||| |||||||| ||||| ||||||| || || ||| || |||||||| | |||||| || |||||| ||| | |
|
|
| T |
5095258 |
gagatggctgtcttggaatggattttctttaacacatatacctacaaacttttacaaaggaagcttggtttccatcgagttagagaatagcaatgtcaaa |
5095357 |
T |
|
| Q |
319 |
cttttgtggaaagag |
333 |
Q |
| |
|
||||| ||||||||| |
|
|
| T |
5095358 |
cttttatggaaagag |
5095372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 333
Target Start/End: Complemental strand, 5355562 - 5355348
Alignment:
| Q |
119 |
gttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaatt |
218 |
Q |
| |
|
||||||| || ||||||||| |||| ||||||| ||| | |||||| | |||| | || ||| ||||||||||| ||||| || |||||||||||| | |
|
|
| T |
5355562 |
gttttagtactaaagcatttaagaagatgaagagactgaaattgcttctacttgctggagtaaaacttgatggaaattttgaatgtctttcaagaaatct |
5355463 |
T |
|
| Q |
219 |
gagatggctgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcaga |
318 |
Q |
| |
|
||| |||||| ||||||| |||||||||||| ||||| ||||| | | || | |||||||||||||||| | |||||| || |||||| ||| | |
|
|
| T |
5355462 |
gaggtggctgtcttggaatgaatttcctttaacacatataccaacaaacctttttctaggaaatttagtttccatagagttagagaatagcaatgtcaaa |
5355363 |
T |
|
| Q |
319 |
cttttgtggaaagag |
333 |
Q |
| |
|
||| ||||||||||| |
|
|
| T |
5355362 |
cttatgtggaaagag |
5355348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 333
Target Start/End: Complemental strand, 5182809 - 5182597
Alignment:
| Q |
121 |
tttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattga |
220 |
Q |
| |
|
||||| ||||||||||| || | ||||| ||||| ||| |||| |||||| | ||||||||||||| || || ||| || ||||||||||||| ||| |
|
|
| T |
5182809 |
tttagtaccaaagcattcaaggagatgaaaaaacttagactgcttcaacttgctagtgtacaacttgagggggactttgaatatctttcaagaaatctga |
5182710 |
T |
|
| Q |
221 |
gatggctgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcagact |
320 |
Q |
| |
|
|||||| |||||||| |||||||| | |||||| || || | || |||||| ||||||||||||||||| ||||| |||||||||| | | | | |
|
|
| T |
5182709 |
tatggctttcttggaatggatttcctttgaaatgcattccttcgagtttttatcaagaaaatttagtttccattgagttagtaaacagcaatgttaaagt |
5182610 |
T |
|
| Q |
321 |
tttgtggaaagag |
333 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
5182609 |
tgtgtggaaagag |
5182597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 119 - 227
Target Start/End: Original strand, 5349366 - 5349474
Alignment:
| Q |
119 |
gttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaatt |
218 |
Q |
| |
|
||||||| || |||||||| |||| ||||||| |||||||||||| |||||| | || ||| ||||||||||||||||| || ||||||||| ||| | |
|
|
| T |
5349366 |
gttttagtactaaagcattcaagaagatgaagagactcagattgcttcaacttgctggggtaaaacttgatggagattttgaatatctttcaaaaaatct |
5349465 |
T |
|
| Q |
219 |
gagatggct |
227 |
Q |
| |
|
||||||||| |
|
|
| T |
5349466 |
gagatggct |
5349474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 332
Target Start/End: Original strand, 5424742 - 5424955
Alignment:
| Q |
119 |
gttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaatt |
218 |
Q |
| |
|
||||||| || |||||||| |||| |||| || |||||||||||| |||||| | || ||| ||||| |||||||||||||| ||||||| ||||| | |
|
|
| T |
5424742 |
gttttagtactaaagcattcaagaagatgacgagactcagattgcttcaacttgctggggtaaaacttaatggagattttaaatatctttcgagaaatct |
5424841 |
T |
|
| Q |
219 |
gagatggctgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaa-atttagtttccattgtgttagaaaacagcaatatcag |
317 |
Q |
| |
|
|||||||||| |||||||| | | ||||| || ||||| ||||||| ||| | |||| ||||||||||||| | |||||| || ||| || || |
|
|
| T |
5424842 |
gagatggctgtcttggaatggatgttctttaccacatatacctacaaacttttat-agagaacatttagtttccatcgagttagagaatagccatgtcca |
5424940 |
T |
|
| Q |
318 |
acttttgtggaaaga |
332 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
5424941 |
acttttgtggaaaga |
5424955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 56 - 228
Target Start/End: Complemental strand, 5068149 - 5067977
Alignment:
| Q |
56 |
tttcacagggaactaaagctgttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagcaccaaagcatttgagaatatgaagaaact |
155 |
Q |
| |
|
||||| ||||||||||| || || |||||||| ||||||| ||||| | || || | || ||||||| || |||||||| |||| ||||||| ||| |
|
|
| T |
5068149 |
tttcaaagggaactaaaactattaaggggctggctttgaagttgccaagatctaatgaaaaatgttttagtactaaagcattcaagaagatgaagagact |
5068050 |
T |
|
| Q |
156 |
cagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctg |
228 |
Q |
| |
|
||||||||| |||||| | || ||| | ||||||||||||||| || ||||||| ||||| ||| ||||||| |
|
|
| T |
5068049 |
cagattgcttcaacttgctggggtaaaccttgatggagattttgaatatctttcgagaaatctgatatggctg |
5067977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 130 - 332
Target Start/End: Complemental strand, 5158425 - 5158223
Alignment:
| Q |
130 |
aaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgc |
229 |
Q |
| |
|
|||||||| |||| ||||||| ||| |||||||| |||||| | || || |||||| ||||||||||||| || |||| |||| ||||||||||| |
|
|
| T |
5158425 |
aaagcattcaagaagatgaagagacttagattgcttcaacttgctggggtcaaacttgttggagattttaaatatatttcgagaagtctgagatggctgt |
5158326 |
T |
|
| Q |
230 |
agtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcagacttttgtggaa |
329 |
Q |
| |
|
|||||| | ||| ||| |||| ||||| ||||||| ||| | ||||||||||||||| | |||||| || |||||||||| |||||| ||||| |
|
|
| T |
5158325 |
cttggaatagattttcttcaacacatatacctacaaacttttatatagaaaatttagtttccatcgagttagagaatagcaatatcaaacttttatggaa |
5158226 |
T |
|
| Q |
330 |
aga |
332 |
Q |
| |
|
||| |
|
|
| T |
5158225 |
aga |
5158223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 252
Target Start/End: Complemental strand, 5103839 - 5103706
Alignment:
| Q |
119 |
gttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaatt |
218 |
Q |
| |
|
||||||| || |||||||| |||| ||||||| ||| ||| |||| |||||||| || ||| ||||||||||||||||| || ||||||| ||||| | |
|
|
| T |
5103839 |
gttttagtactaaagcattcaagaagatgaagagacttagactgcttcaactttctggagtaaaacttgatggagattttgaatatctttcgagaaatct |
5103740 |
T |
|
| Q |
219 |
gagatggctgcagtggaatgggtttcctttaaca |
252 |
Q |
| |
|
|| || |||| |||||||| ||| |||||||| |
|
|
| T |
5103739 |
gaaattgctgtcttggaatggattttctttaaca |
5103706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 239
Target Start/End: Complemental strand, 5261040 - 5260920
Alignment:
| Q |
119 |
gttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaatt |
218 |
Q |
| |
|
||||||| || ||||||||||| || ||||||| ||||||||||| |||||| | | ||| |||||||||| |||||| || || |||||||| | || |
|
|
| T |
5261040 |
gttttagtactaaagcatttgaaaagatgaagagtctcagattgcttcaacttgctgaagtaaaacttgatggggattttgaatatgtttcaagagattt |
5260941 |
T |
|
| Q |
219 |
gagatggctgcagtggaatgg |
239 |
Q |
| |
|
|||| |||| ||||||||| |
|
|
| T |
5260940 |
gagactgctgtcgtggaatgg |
5260920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 239
Target Start/End: Complemental strand, 5285038 - 5284918
Alignment:
| Q |
119 |
gttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaatt |
218 |
Q |
| |
|
||||||| || ||||||||||| || ||||||| ||||||||||| |||||| | | ||| |||||||||| |||||| || || |||||||| | || |
|
|
| T |
5285038 |
gttttagtactaaagcatttgaaaagatgaagagtctcagattgcttcaacttgcagaagtaaaacttgatggggattttgaatatgtttcaagagattt |
5284939 |
T |
|
| Q |
219 |
gagatggctgcagtggaatgg |
239 |
Q |
| |
|
|||| |||| ||||||||| |
|
|
| T |
5284938 |
gagactgctgtcgtggaatgg |
5284918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 5446195 - 5446274
Alignment:
| Q |
119 |
gttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagatttt |
198 |
Q |
| |
|
||||||| || ||||||||||| || ||||||| ||||||||| || |||||| | | ||| ||||||||||||||||| |
|
|
| T |
5446195 |
gttttagtactaaagcatttgaaaagatgaagagactcagatttcttcaacttgctgaggtaaaacttgatggagatttt |
5446274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 345
Target Start/End: Complemental strand, 9651 - 9348
Alignment:
| Q |
42 |
tttggtcatttatatttcacagggaactaaagctgttgaggggctgagtttgaagctgccaggtcatagtgcacaacgttttagcaccaaagcatttgag |
141 |
Q |
| |
|
|||||||| |||||||||| ||||||| |||||||||||||| || ||||||| ||||| |||| || || ||||||| | || |||||||| |
|
|
| T |
9651 |
tttggtcaattatatttcatagggaacaaaagctgttgagggactagctttgaagttgccaataactagttcaaaatgttttagtgctgaatcatttgag |
9552 |
T |
|
| Q |
142 |
aatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaaattgagatggctgcagtggaatgggt |
241 |
Q |
| |
|
|| ||| ||| ||| |||||||| |||||| | || |||||||||||||||||||| | |||||||||||||| | ||||||||| ||||| || | |
|
|
| T |
9551 |
aagatggagagactaagattgcttcaacttgctggagtacaacttgatggagatttcgagtatctttcaagaaaactaagatggctgtgttggaaaggat |
9452 |
T |
|
| Q |
242 |
ttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatcagacttttgtggaaagagatgcaggt |
341 |
Q |
| |
|
|||||||| ||| |||||| |||||||| ||||||||||||||||||||||||| |||||||||||| || || | | || |||||||||||| ||||| |
|
|
| T |
9451 |
ttcctttaccattcataccttcaaacttttatcaaagaaatttagtttccattgagttagaaaacagtaaaatgatatttgtgtggaaagagacccaggt |
9352 |
T |
|
| Q |
342 |
atta |
345 |
Q |
| |
|
|||| |
|
|
| T |
9351 |
atta |
9348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 116 - 333
Target Start/End: Complemental strand, 36214765 - 36214548
Alignment:
| Q |
116 |
aacgttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttcaagaaa |
215 |
Q |
| |
|
|||| ||||| || ||||||||| |||| ||||| | |||||||||||| |||||| | ||||||||||||||||| || ||| | ||||||||| ||| |
|
|
| T |
36214765 |
aacgctttagtactaaagcatttaagaagatgaaaagactcagattgcttcaacttgctggtgtacaacttgatggggactttgagtatctttcaaaaaa |
36214666 |
T |
|
| Q |
216 |
attgagatggctgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagcaatatc |
315 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||| || |||| ||| |||||| ||||||||||||||||| |||||||||||||||| || |
|
|
| T |
36214665 |
tttgagatggctttcttggaatggttttcctttaacatgcattccttcaagcttttatcaagaaaatttagtttccattgagttagaaaacagcaatgtc |
36214566 |
T |
|
| Q |
316 |
agacttttgtggaaagag |
333 |
Q |
| |
|
| || | ||||| ||||| |
|
|
| T |
36214565 |
aaacatgtgtgggaagag |
36214548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 18934463 - 18934542
Alignment:
| Q |
130 |
aaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttc |
209 |
Q |
| |
|
|||||||| ||||| ||||| || || | |||||| |||||||| |||||||||||| ||||||||| ||| ||||||| |
|
|
| T |
18934463 |
aaagcattcgagaagatgaataagcttaaattgcttcaactttctggtgtacaacttaatggagattacaaatatctttc |
18934542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 111 - 345
Target Start/End: Original strand, 8876972 - 8877206
Alignment:
| Q |
111 |
tgcacaacgttttagcaccaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttca |
210 |
Q |
| |
|
|||| |||||||||| || ||||||||| |||| ||||||| |||||||||||| |||||| |||| ||||||||||||||| | ||| || |||||| |
|
|
| T |
8876972 |
tgcaaaacgttttagtactaaagcatttaagaagatgaagagactcagattgcttcaacttgccggcgtacaacttgatggaaactttgaatttctttcc |
8877071 |
T |
|
| Q |
211 |
agaaaattgagatggctgcagtggaatgggtttcctttaacatgcataccgtcaaacttctatcaaagaaatttagtttccattgtgttagaaaacagca |
310 |
Q |
| |
|
| ||| |||||| | | ||||||| ||||||||||| |||||||| | |||| |||||| |||||| || || || | ||||||||| |||| |
|
|
| T |
8877072 |
aaaaatctgagattgttatcttggaatgcatttcctttaacctgcatacctaccgacttttatcaagaaaatttggtatctatcgagttagaaaatagca |
8877171 |
T |
|
| Q |
311 |
atatcagacttttgtggaaagagatgcaggtatta |
345 |
Q |
| |
|
|| ||| | || |||||||||| || ||||||||| |
|
|
| T |
8877172 |
atgtcaaagttctgtggaaagaaattcaggtatta |
8877206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 127 - 210
Target Start/End: Original strand, 5755 - 5838
Alignment:
| Q |
127 |
accaaagcatttgagaatatgaagaaactcagattgctgcaactttccggtgtacaacttgatggagattttaaacatctttca |
210 |
Q |
| |
|
|||||||||||| |||| ||||| |||||||||||||| ||||||||||| || || ||| |||||||||||||| | |||||| |
|
|
| T |
5755 |
accaaagcatttaagaagatgaataaactcagattgcttcaactttccggggttcagcttaatggagattttaaatacctttca |
5838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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