View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7606_high_9 (Length: 241)
Name: NF7606_high_9
Description: NF7606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7606_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 37086195 - 37085969
Alignment:
| Q |
1 |
agaagttgaagcatcttggaatgaaaggttcaccgttttttgtttctttcttcagttgtttattgatttaaaatttacgtttgaaataaataaatagatt |
100 |
Q |
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| T |
37086195 |
agaagttgaagcatctcggaaagaaaggttcaccgttttttgtttctttcttcagttgtttagtgattaaaaatttacgtttgaaataaataaatagatt |
37086096 |
T |
|
| Q |
101 |
atttggagtttggattccgacccataaatgtattatgtgagcatgagcattgttaaactcgcattatgtgagca-tgttattatgttcttgttaattgaa |
199 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
37086095 |
atttggagtttggattccgacccatacatgtattatgtgagcatgagcattgttaaactcgcattatgtgagcattgttattatgttcttgttaattgaa |
37085996 |
T |
|
| Q |
200 |
tattactactcatttagagaaatatct |
226 |
Q |
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||||||||||||||||||||||||||| |
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| T |
37085995 |
tattactactcatttagagaaatatct |
37085969 |
T |
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