View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7607_low_31 (Length: 431)
Name: NF7607_low_31
Description: NF7607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7607_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 9 - 423
Target Start/End: Original strand, 28458269 - 28458685
Alignment:
| Q |
9 |
agcaaaggttacgacttatcatatcaaccattgtagccattcccaatcagccgttcccatttaatacaatgcatacatcacaatgcagtttctctctttg |
108 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |
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| T |
28458269 |
agcaaaggttacgacttatcatatcaaccattgtagccattcccaatcagccgttcccatttaatacaatgcatacatcaccatgcagtttctctatttg |
28458368 |
T |
|
| Q |
109 |
ctaacctcacaaagtcctagcatatctaaagtgcaaagnnnnnnnnn--ttaattaatttccatatatgttgttaatcccagatagcgacgtgtagtgcc |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28458369 |
ctaacctcacaaagtcctagcatatctaaagtgcaaagaaaaaaaaaaattaattaatttccatatatgttgttaatcccagatagcgacgtgtagtgcc |
28458468 |
T |
|
| Q |
207 |
gaaccctaaaatccctacagaggtatatcggatagcgggatggccacaattcgtgaccatgataattgccattgctgaaggcggctcacagggagatggc |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
28458469 |
gaaccctaaaatccctacagaggtatatcggatagcgggatggccacaattcatgaccatgataactgccattgctgaaggcggctcacagggagatggc |
28458568 |
T |
|
| Q |
307 |
atcacggaaaatcctaaaactgctacaccattccgcttagtgcgctgatctacaaaatttttaatttacaagtattgctttccaaatccaatttacaaaa |
406 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28458569 |
atcacggaaaatcctaccactgctacaccattccgcttagtgcgctgatctacaaaatttttaatttacaagtattgctttccaaatccaatttacaaaa |
28458668 |
T |
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| Q |
407 |
ttataaaaatgatgatg |
423 |
Q |
| |
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|||||| |||||||||| |
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| T |
28458669 |
ttataataatgatgatg |
28458685 |
T |
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