View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7607_low_76 (Length: 266)
Name: NF7607_low_76
Description: NF7607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7607_low_76 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 7307312 - 7307546
Alignment:
| Q |
16 |
atcaaaagtgaaatcaagcttgactatgtccgagatttcgaatcatgtagatgttcagtgttcacaatacctataattctattacatatatcatacaaag |
115 |
Q |
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| T |
7307312 |
atcaaaagtgaaatcaagcttgactatgtccgagatttcgaatcatgtagatgttcagtgttcacaatacctataattctattacatatatcatacaaag |
7307411 |
T |
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| Q |
116 |
tgtaattaaaccctagttgcttagataatggcaaggaaaaagcaggaccgaaaagtatgtgggtcaatgtttgcaagttttgtccagaaagatacaagaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7307412 |
tgtaattaaaccctagttgcttagataatggcaaggaaaaagcaggaccgaaaagtatgtgggtcaatgtttgcaagttttgtccagaaagatacaagaa |
7307511 |
T |
|
| Q |
216 |
aaagttggtaggaccaatggaaaacacaaagtaat |
250 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
7307512 |
aaagttggtaggaccaatggaaaacacaaagtaat |
7307546 |
T |
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