View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7607_low_85 (Length: 249)

Name: NF7607_low_85
Description: NF7607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7607_low_85
NF7607_low_85
[»] chr7 (18 HSPs)
chr7 (35-218)||(30863021-30863201)
chr7 (35-218)||(38129383-38129560)
chr7 (35-216)||(30623720-30623895)
chr7 (82-217)||(41913095-41913229)
chr7 (83-217)||(28327339-28327474)
chr7 (35-212)||(42711162-42711331)
chr7 (35-212)||(1690997-1691166)
chr7 (35-186)||(3910161-3910307)
chr7 (35-218)||(40942108-40942284)
chr7 (35-210)||(21699298-21699466)
chr7 (99-212)||(41381771-41381885)
chr7 (117-212)||(27956591-27956687)
chr7 (143-212)||(45461660-45461729)
chr7 (86-217)||(30936093-30936223)
chr7 (82-129)||(45458838-45458885)
chr7 (82-212)||(44963827-44963956)
chr7 (87-204)||(8770382-8770498)
chr7 (35-204)||(45857487-45857648)
[»] chr6 (11 HSPs)
chr6 (35-219)||(4110782-4110964)
chr6 (35-216)||(13390616-13390794)
chr6 (35-221)||(1096445-1096627)
chr6 (35-217)||(26358551-26358728)
chr6 (35-220)||(24213144-24213322)
chr6 (35-217)||(32833773-32833948)
chr6 (82-210)||(8401420-8401551)
chr6 (82-197)||(24487304-24487420)
chr6 (82-217)||(17545876-17546010)
chr6 (35-217)||(6848742-6848921)
chr6 (82-217)||(2259176-2259311)
[»] chr1 (31 HSPs)
chr1 (35-218)||(39971267-39971444)
chr1 (35-217)||(18642100-18642276)
chr1 (35-216)||(45423841-45424021)
chr1 (35-217)||(39190562-39190738)
chr1 (78-218)||(46770729-46770869)
chr1 (35-215)||(45673545-45673722)
chr1 (85-217)||(23459548-23459680)
chr1 (39-213)||(51520046-51520217)
chr1 (35-212)||(8461531-8461701)
chr1 (78-216)||(38262134-38262271)
chr1 (35-195)||(50905811-50905964)
chr1 (35-217)||(23056932-23057108)
chr1 (35-217)||(23061233-23061409)
chr1 (82-217)||(35305423-35305559)
chr1 (82-218)||(51985207-51985343)
chr1 (82-217)||(6519986-6520121)
chr1 (82-222)||(37499015-37499154)
chr1 (77-199)||(43306800-43306921)
chr1 (82-218)||(921840-921976)
chr1 (35-217)||(5956525-5956701)
chr1 (35-204)||(51369549-51369712)
chr1 (35-212)||(26102477-26102647)
chr1 (35-204)||(28494003-28494164)
chr1 (82-193)||(52303285-52303396)
chr1 (35-173)||(29106408-29106538)
chr1 (82-160)||(16482849-16482926)
chr1 (137-218)||(50239275-50239356)
chr1 (86-203)||(23304685-23304800)
chr1 (137-218)||(51184366-51184447)
chr1 (35-66)||(41073505-41073536)
chr1 (82-159)||(7122228-7122304)
[»] chr3 (24 HSPs)
chr3 (35-216)||(40650298-40650477)
chr3 (35-217)||(35171190-35171368)
chr3 (35-216)||(47948392-47948569)
chr3 (78-216)||(42848190-42848328)
chr3 (35-195)||(31309111-31309264)
chr3 (82-212)||(42067850-42067981)
chr3 (82-217)||(46959824-46959959)
chr3 (35-212)||(29786537-29786708)
chr3 (82-217)||(876221-876356)
chr3 (35-217)||(44365841-44366016)
chr3 (35-212)||(38785086-38785256)
chr3 (35-217)||(42363927-42364102)
chr3 (35-212)||(44670263-44670432)
chr3 (82-212)||(11140518-11140647)
chr3 (35-223)||(45636320-45636502)
chr3 (106-221)||(378598-378712)
chr3 (138-212)||(29347315-29347389)
chr3 (82-140)||(37492189-37492247)
chr3 (86-154)||(4660031-4660099)
chr3 (141-212)||(39629952-39630023)
chr3 (86-212)||(52082047-52082172)
chr3 (155-212)||(37492241-37492298)
chr3 (35-66)||(42848350-42848381)
chr3 (82-160)||(39678379-39678457)
[»] chr2 (18 HSPs)
chr2 (35-216)||(42427568-42427748)
chr2 (35-212)||(3383195-3383366)
chr2 (35-211)||(15771314-15771483)
chr2 (35-217)||(4673600-4673776)
chr2 (82-218)||(14532822-14532958)
chr2 (82-210)||(11813198-11813327)
chr2 (82-217)||(37083482-37083618)
chr2 (82-219)||(34665843-34665979)
chr2 (35-219)||(5389199-5389375)
chr2 (35-212)||(59150-59321)
chr2 (82-202)||(33423048-33423168)
chr2 (82-193)||(3810473-3810584)
chr2 (82-212)||(1353779-1353908)
chr2 (35-195)||(6884391-6884547)
chr2 (35-212)||(11227859-11228029)
chr2 (82-212)||(38963071-38963202)
chr2 (35-217)||(6438171-6438346)
chr2 (177-217)||(34438186-34438226)
[»] chr5 (26 HSPs)
chr5 (81-222)||(3056667-3056808)
chr5 (35-218)||(36338843-36339019)
chr5 (35-220)||(18228456-18228635)
chr5 (39-218)||(1661690-1661865)
chr5 (35-218)||(2141473-2141650)
chr5 (35-217)||(2414155-2414331)
chr5 (35-216)||(9535098-9535273)
chr5 (35-212)||(32467275-32467445)
chr5 (35-217)||(43237354-43237529)
chr5 (35-212)||(6561058-6561228)
chr5 (82-212)||(13410813-13410944)
chr5 (35-212)||(34302880-34303050)
chr5 (35-220)||(6532812-6532990)
chr5 (82-197)||(21605921-21606037)
chr5 (83-217)||(24098143-24098277)
chr5 (82-179)||(6318323-6318420)
chr5 (35-176)||(2029585-2029719)
chr5 (82-180)||(6113809-6113908)
chr5 (82-212)||(42917390-42917520)
chr5 (35-220)||(13091144-13091323)
chr5 (35-212)||(22780745-22780915)
chr5 (35-217)||(14967462-14967638)
chr5 (35-66)||(3056616-3056647)
chr5 (35-65)||(6318431-6318461)
chr5 (86-212)||(9589485-9589610)
chr5 (35-159)||(29744135-29744251)
[»] chr4 (27 HSPs)
chr4 (78-216)||(34280224-34280362)
chr4 (35-216)||(33075979-33076157)
chr4 (35-216)||(46041932-46042107)
chr4 (82-212)||(47302252-47302382)
chr4 (35-218)||(52589302-52589480)
chr4 (35-216)||(27539147-27539323)
chr4 (35-221)||(37518960-37519139)
chr4 (35-221)||(37523176-37523355)
chr4 (91-216)||(30539841-30539966)
chr4 (80-221)||(43137366-43137507)
chr4 (35-217)||(3716557-3716732)
chr4 (82-217)||(48578906-48579040)
chr4 (82-212)||(41759663-41759792)
chr4 (91-224)||(52592074-52592207)
chr4 (82-219)||(55722750-55722886)
chr4 (82-220)||(38836122-38836260)
chr4 (82-212)||(37855393-37855524)
chr4 (82-212)||(30343097-30343230)
chr4 (82-217)||(11109595-11109732)
chr4 (82-180)||(14802984-14803083)
chr4 (35-217)||(51435811-51435987)
chr4 (35-212)||(53388850-53389020)
chr4 (82-212)||(28037957-28038087)
chr4 (35-212)||(36091289-36091460)
chr4 (82-212)||(9858522-9858651)
chr4 (86-212)||(31908719-31908844)
chr4 (123-163)||(43147803-43147843)
[»] chr8 (24 HSPs)
chr8 (35-215)||(38502415-38502595)
chr8 (35-222)||(14498298-14498479)
chr8 (35-217)||(36002588-36002766)
chr8 (35-220)||(15725886-15726064)
chr8 (35-224)||(946201-946385)
chr8 (39-210)||(10280795-10280960)
chr8 (35-217)||(29459866-29460042)
chr8 (82-221)||(37511360-37511500)
chr8 (35-217)||(37161736-37161921)
chr8 (35-217)||(34332344-34332518)
chr8 (82-211)||(29229181-29229310)
chr8 (35-218)||(44935131-44935306)
chr8 (35-217)||(28090423-28090597)
chr8 (35-217)||(29773677-29773851)
chr8 (35-204)||(12162952-12163115)
chr8 (35-204)||(12407380-12407543)
chr8 (82-212)||(23274895-23275026)
chr8 (35-193)||(39171105-39171255)
chr8 (82-212)||(23286837-23286967)
chr8 (98-178)||(23275078-23275158)
chr8 (113-222)||(39170992-39171103)
chr8 (35-212)||(17642304-17642475)
chr8 (35-212)||(2273241-2273411)
chr8 (82-157)||(43049808-43049882)
[»] scaffold0077 (1 HSPs)
scaffold0077 (35-217)||(48242-48416)
[»] scaffold0005 (1 HSPs)
scaffold0005 (82-180)||(36644-36743)
[»] scaffold0283 (1 HSPs)
scaffold0283 (82-218)||(6511-6646)


Alignment Details
Target: chr7 (Bit Score: 134; Significance: 7e-70; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 30863021 - 30863201
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30863021 ttagtatgatttttataaaaaatgaaatgatgtttttttt---ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 30863117  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  30863118 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtacaatagaagtccccta 30863201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 38129560 - 38129383
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  38129560 ttagtatgatttttataaaaaatgaaatgatgttttt------ttcatataaaatgatgttttctaaaatatatatgtcaacaaacacttattttcttca 38129467  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||    
T  38129466 taaaaaatgatagttaatttataaaaattgtaagcaagaataccggtacaccgtaatttacgggtgtaccatagaagtccccta 38129383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 35 - 216
Target Start/End: Complemental strand, 30623895 - 30623720
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |    
T  30623895 ttagtatgatttttataaaaaatgaaatgatgttttt------ttcatataaaatgatattttctaaaatatatatgtcaacaaacacttattttcttta 30623802  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  30623801 taaaaaatgatagttaatttataaaaattgtaagcgagagtatcggtacaccgtaatttatgggtgtaccatagaagtcccc 30623720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 41913229 - 41913095
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  41913229 tataaaataatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccggt 41913131  T
Q  182 acaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||| |||||| |||||||||||||||||| ||||    
T  41913130 acaccttaatttgcgggtgtaccatagaagttccct 41913095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 28327339 - 28327474
Alignment:
Q  83 ataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||     
T  28327339 ataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagaggaccggt 28327438  T
Q  182 acaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||| | |||||| |||||||||| ||||||| ||||    
T  28327439 acagcttaatttgcgggtgtaccgtagaagttccct 28327474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 42711162 - 42711331
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||    
T  42711162 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttca 42711254  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| ||| |||||| |||||||    
T  42711255 taaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccggtacaccttaatttgcggatgtaccgtagaagt 42711331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 1691166 - 1690997
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||| ||||||||||||||||||||||||           ||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  1691166 ttagtatcatttttataaaaaatgaaatgatgttttt------ttcttataaaatgatattttctaaaatatat--gtcaacaaacacctattttcttca 1691075  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||| | ||| ||||||||||||||||  |||||||    
T  1691074 taaaaaatgatagttaatttaaaaaaattgtaaatgagagtaccggtataccataatttacgggtgtacggtagaagt 1690997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 35 - 186
Target Start/End: Original strand, 3910161 - 3910307
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-c 133  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||| ||||||||||||||||||| |||||||||||||||||||||| |    
T  3910161 ttagtatgatttttctaaaaaatgaaatgatggtttt------ttcttataaaataatattttctaaaatatatatgtcaacaaacacctattttctttc 3910254  T
Q  134 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacacc 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3910255 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacacc 3910307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 40942108 - 40942284
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||| ||||||||||| ||||||||||||||||||  ||||    
T  40942108 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttttaaaatatatatgtcaacaaacacctatttctttca 40942200  T
Q  135 t-aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    | |||||||||||||||||||||||||| |||||||||||||||||| ||| | |||||||||| |||||||||||||| |||||    
T  40942201 taaaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccggtacatcttaatttacggatgtaccatagaagttcccta 40942284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 210
Target Start/End: Complemental strand, 21699466 - 21699298
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||    
T  21699466 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttca 21699374  T
Q  135 taa-aaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaa 210  Q
    ||| ||||||||| |||||||||||||| ||||| |||||||| ||| ||||| |||||| || |||||||||||||    
T  21699373 taaaaaaatgataattaatttataaaaa-tgtaaacgagagtatcggtacaccttaatttgcgagtgtaccatagaa 21699298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 41381771 - 41381885
Alignment:
Q  99 taaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgg 197  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||  |||  ||||||||||    
T  41381771 taaaatatatatgtcaacaaagacctattttctttcataaaaaatgatagttaatttataaaaattgtaagcaaaagtaccggtgcacattaatttacgg 41381870  T
Q  198 gtgtaccatagaagt 212  Q
    ||||||| |||||||    
T  41381871 gtgtaccgtagaagt 41381885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 212
Target Start/End: Original strand, 27956591 - 27956687
Alignment:
Q  117 aaacacctattttcttc-ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||||||||||||||||||    
T  27956591 aaacacctattttcttttacaaaaaatgatagttaatttataaaatttgtaagcgagagtaccggtacaccttaatttgcgggtgtaccatagaagt 27956687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 45461660 - 45461729
Alignment:
Q  143 gatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| | |||||||| |||||||    
T  45461660 gatagttaaattataaaaattgtaagcgagagtaccggtacaccgtaatttgcaggtgtaccgtagaagt 45461729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 30936223 - 30936093
Alignment:
Q  86 aaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacac 185  Q
    |||||||||||||||||||||| |  |||||||| | || |||  ||||| |||| ||||||||||||||||||  ||  |||  |||||||||| ||||    
T  30936223 aaatgatattttctaaaatataaatatcaacaaatagctttttatttcat-aaaattgatagttaatttataaatttttgaagtaagagtaccggtacac 30936125  T
Q  186 cgtaatttacgggtgtaccatagaagtcccct 217  Q
    | |||||| |||||||||| ||||||| ||||    
T  30936124 cttaatttgcgggtgtaccgtagaagttccct 30936093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 45458838 - 45458885
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctatttt 129  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  45458838 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttt 45458885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 44963956 - 44963827
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||| | |  |||||||| | || |||  ||||| |||||||||||||||||||||||  ||  |||  ||||||||||     
T  44963956 tataaaatgatattttctaaaatacaaatatcaacaaataactttttatttcat-aaaaatgatagttaatttataaatttttgaagtaagagtaccggt 44963858  T
Q  182 acaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||| ||| ||  |||||||||||||||||    
T  44963857 acaccttaaattgtgggtgtaccatagaagt 44963827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 8770498 - 8770382
Alignment:
Q  87 aatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacacc 186  Q
    ||||||||||||||||||| | |  |||||||||| || |||  ||||| ||||||||||||||||||||| |  ||  |||| |||||| ||| |||||    
T  8770498 aatgatattttctaaaatacaaatatcaacaaacaactctttatttcat-aaaaatgatagttaatttatagatttttgaagcaagagtatcggtacacc 8770400  T
Q  187 gtaatttacgggtgtacc 204  Q
     |||||| ||||||||||    
T  8770399 ttaatttgcgggtgtacc 8770382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 45857648 - 45857487
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||| ||||||||||||           ||| ||| |||||||||||||||||||||| |  |||||||| | || |||  ||||    
T  45857648 ttagtatgatttttataaacaatgaaatgatgtttt-------ttcttattaaatgatattttctaaaatataaatatcaacaaatagctttttatttca 45857556  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtacc 204  Q
    | |||| | ||||||||||||||||  ||  |||  |||||||||| ||||| |||||| ||||||||||    
T  45857555 t-aaaagtaatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtacc 45857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 7e-70; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 35 - 219
Target Start/End: Original strand, 4110782 - 4110964
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||          |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  4110782 ttagtatgatttttataaaaaatgaaatgatgtttttttt--cttcatataaaatgatattttcgaaaatatatatgtcaacaaacacctattttcttca 4110879  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaa 219  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  4110880 taaaaaatgatagttaatttataaaaattgtaagcgagagaaccggtacaccgtaatttacgggtgtaccatagaagtcccctaa 4110964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 13390616 - 13390794
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13390616 ttagtatgatttttataaaaaatgaaatgatatttttttt---ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 13390712  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  13390713 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacaggtgtaccatagaagtcccc 13390794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 35 - 221
Target Start/End: Original strand, 1096445 - 1096627
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  1096445 ttagtatgatttttataaaaaatgaaatgatgtttttttt---ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcctca 1096541  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaata 221  Q
    |||||| | |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1096542 taaaaatt-atagttaatttataaaaattataagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccctaata 1096627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 26358728 - 26358551
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           | |||||||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  26358728 ttagtatgatttttataaaaaatgaaatgatgtttttt-----tccatataaaatgatattttttaaaatatatatgtcaacaaacacgtattttcttca 26358634  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || ||||| |||||||||| ||||||||| |||||||||    
T  26358633 taaaaaatgatagttaatttataaaaattataagcgagagtactggtacaccataatttacggttgtaccataaaagtcccct 26358551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 35 - 220
Target Start/End: Original strand, 24213144 - 24213322
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24213144 ttagtatgatttttataaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 24213236  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaat 220  Q
    |||||||||||||||||||||||||||||||||| || |||||||  | |||||||||| |||||||||| ||||| | |||||||    
T  24213237 taaaaaatgatagttaatttataaaaattgtaagtgaaagtaccgatataccgtaatttgcgggtgtaccgtagaaattccctaat 24213322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 32833948 - 32833773
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||| | |||| |||||||||||    
T  32833948 ttagtatgatttttataaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaatagacacttattttcttca 32833856  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||| ||||||| ||||    
T  32833855 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccagtacaccgtaatttgcggatgtaccgtagaagttccct 32833773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 82 - 210
Target Start/End: Complemental strand, 8401551 - 8401420
Alignment:
Q  82 tataaaatgatattttctaaaatatatag--gtcaacaaacacctattttcttcataaaaaa-tgatagttaatttataaaaattgtaagcgagagtacc 178  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |    
T  8401551 tataaaatgatattttctaaaatatatatatgtcaacaaacacctattttcttcataaaaaaatgatagttaatttataaaaattgtaagtgagagtagc 8401452  T
Q  179 ggaacaccgtaatttacgggtgtaccatagaa 210  Q
    || |||||||||||| |||||||||| |||||    
T  8401451 ggtacaccgtaatttgcgggtgtaccgtagaa 8401420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 82 - 197
Target Start/End: Complemental strand, 24487420 - 24487304
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24487420 tataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaacttataaaaattgtaagcgagagtaccgg 24487321  T
Q  181 aacaccgtaatttacgg 197  Q
     ||||| ||||||||||    
T  24487320 tacaccttaatttacgg 24487304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 17545876 - 17546010
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||| |     
T  17545876 tataaaataatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccagt 17545974  T
Q  182 acaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||| |||||| ||||||||| |||||||| ||||    
T  17545975 acaccttaatttgcgggtgtactatagaagttccct 17546010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 6848742 - 6848921
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttc- 133  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||      
T  6848742 ttagtatgatttttctaaaaaatgaaatgatgttt--------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttttttt 6848833  T
Q  134 -----ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
         ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||| ||||    
T  6848834 tttttataaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttacgggtgtaccgtagaagttccct 6848921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 2259176 - 2259311
Alignment:
Q  82 tataaaatgatatt-ttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||| || ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||| |    
T  2259176 tataaaatgatattattttaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtacctg 2259274  T
Q  181 aacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
     ||||| |||||| |||||||||| ||||||| ||||    
T  2259275 tacaccttaatttgcgggtgtaccgtagaagttccct 2259311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 7e-70; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 39971444 - 39971267
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  39971444 ttagtatgatttttataaaaaatgaaatgatgctttt------ttcatataaaatgatattttctaaaatatatatgtcaacaaaaacctattttcttca 39971351  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39971350 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccta 39971267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 18642100 - 18642276
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  18642100 ttagtatgatttttataaaaaatgaaatgatgttttt------ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctatttttttca 18642193  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18642194 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccct 18642276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 45423841 - 45424021
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45423841 ttagtatgatttttataaaaaatgaaatgatgtttttttttt-ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 45423939  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  45423940 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacatcgtaatttacgggtgtaccatagaagtcccc 45424021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 39190738 - 39190562
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39190738 ttagtatgatttttataaaaaatgaaatgatgttttt------ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 39190645  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  39190644 taaaaaatgatagttaatttataaaaattataagcgagagtaccggtacaccgtaatttactggtgtaccatagaagtcccct 39190562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 78 - 218
Target Start/End: Complemental strand, 46770869 - 46770729
Alignment:
Q  78 ttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtac 177  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46770869 ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagtgagagtac 46770770  T
Q  178 cggaacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    ||| | ||||||||||||||||||||||||||| |||||||    
T  46770769 cggtagaccgtaatttacgggtgtaccatagaaatccccta 46770729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 35 - 215
Target Start/End: Original strand, 45673545 - 45673722
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  45673545 ttagtatgatttttataaaaaatgaaatgatgtttttttt---ttcatataaaataatattttctaaaatatatttgtcaacaaacacctattttcttca 45673641  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccc 215  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  45673642 taaaaaatgatagttaacttataaaaattgtaagcgagagtaccggtacaccgtaatttacggatgtaccatagaagtccc 45673722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 85 - 217
Target Start/End: Complemental strand, 23459680 - 23459548
Alignment:
Q  85 aaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaaca 184  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||    
T  23459680 aaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattataagcgagagtactggtaca 23459581  T
Q  185 ccgtaatttacgggtgtaccatagaagtcccct 217  Q
    |||||||||||||||||||||||||||||||||    
T  23459580 ccgtaatttacgggtgtaccatagaagtcccct 23459548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 39 - 213
Target Start/End: Original strand, 51520046 - 51520217
Alignment:
Q  39 tatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaa 138  Q
    ||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  51520046 tatgatttttataaaaaatgaaatgatgtttttttt---ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaa 51520142  T
Q  139 aaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtc 213  Q
    |||||||||||||||||||||||||| ||| ||||||||||| || |||||||||||||||||||||||||||||    
T  51520143 aaatgatagttaatttataaaaattgaaagtgagagtaccggtaccccgtaatttacgggtgtaccatagaagtc 51520217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 8461701 - 8461531
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||| |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  8461701 ttagtatgatttttataaaaaatgaaatgatgtttt-------ttcttataaaataatattttctaaaatatatatgtcaacaaacaccaattttcttca 8461609  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||    
T  8461608 taaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtacaccgtaatttgcgggtgtaccatagaagt 8461531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 78 - 216
Target Start/End: Complemental strand, 38262271 - 38262134
Alignment:
Q  78 ttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtac 177  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  38262271 ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgataattaatttataaaaattgtaagcgagagta- 38262173  T
Q  178 cggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    ||  |||||||||| |||||||||||||||||| |||||    
T  38262172 cgatacaccgtaatctacgggtgtaccatagaaatcccc 38262134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 35 - 195
Target Start/End: Original strand, 50905811 - 50905964
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50905811 ttagtatgatttttataaaaaatgaaatgatgtttt-------tttatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 50905903  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttac 195  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50905904 taaaaaattatatttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttac 50905964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 23056932 - 23057108
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-c 133  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  23056932 ttagtatgatttttctaaaaaatgaaatgatgtatt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttc 23057024  T
Q  134 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||||||| ||||||| ||||    
T  23057025 ataaaaaatgatagttaatttataaaaattgtaagcgagaggaccggtacaccttaatttgcgggtgtaccgtagaagttccct 23057108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 23061233 - 23061409
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-c 133  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  23061233 ttagtatgatttttctaaaaaatgaaatgatgtatt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttc 23061325  T
Q  134 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||    
T  23061326 ataaaaaatgataattaatttataaaaattgtaagcgagagtaccggtacaccttaatttgcgggtgtaccgtagaagttccct 23061409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 35305423 - 35305559
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35305423 tataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 35305522  T
Q  181 aacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
     ||||| ||||||||| ||||||| ||||||| ||||    
T  35305523 tacaccttaatttacgagtgtaccgtagaagttccct 35305559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 82 - 218
Target Start/End: Original strand, 51985207 - 51985343
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||     
T  51985207 tataaaatgatattttctaaaatatatttgtcaacaaacacctattttcttcataaagaattatagttaatttataaaaattgtaagcgagagtaccggt 51985306  T
Q  182 acaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    |||||||||||| | |||||||| ||||||| |||||    
T  51985307 acaccgtaatttgcaggtgtaccgtagaagttcccta 51985343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 6520121 - 6519986
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6520121 tataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 6520022  T
Q  181 aacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
     ||||| |||||| | |||||||| ||||||| ||||    
T  6520021 tacaccttaatttgc-ggtgtaccgtagaagttccct 6519986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 82 - 222
Target Start/End: Original strand, 37499015 - 37499154
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  37499015 tataaaataatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccggt 37499113  T
Q  182 acaccgtaatttacgggtgtaccatagaagtcccctaatat 222  Q
    ||||| |||||| |||||||||||||||||| ||| |||||    
T  37499114 acaccttaatttgcgggtgtaccatagaagttcccaaatat 37499154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 43306800 - 43306921
Alignment:
Q  77 cttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagta 176  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||| ||||||||    
T  43306800 cttcatataaaatgatattttctaaaatatatatgtcaacaaacgcctattttcttcat-aaaaattatagttaatttataaaaattgtaaacgagagta 43306898  T
Q  177 ccggaacaccgtaatttacgggt 199  Q
    |||| ||||||||||||||||||    
T  43306899 ccggtacaccgtaatttacgggt 43306921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 82 - 218
Target Start/End: Complemental strand, 921976 - 921840
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttc-ttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  921976 tataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaa-cgagagtaccgg 921878  T
Q  181 aacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
     ||||| |||||| | |||||||||||||||| |||||    
T  921877 tacaccttaatttgcaggtgtaccatagaagttcccta 921840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 5956701 - 5956525
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-c 133  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  5956701 ttagtatgatttttctaaaaaatgaaatgatgtatt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttc 5956609  T
Q  134 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| | ||||||  ||||||||| ||||||| ||||    
T  5956608 ataaaaaatgatagttaatttataaaaattataagcgagagtaccggtacagcttaatttgtgggtgtaccgtagaagttccct 5956525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 51369549 - 51369712
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-c 133  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  51369549 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttc 51369641  T
Q  134 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtacc 204  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||||||||    
T  51369642 ataaaaaataatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttgcaggtgtacc 51369712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 26102647 - 26102477
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  26102647 ttagtatgatttttataaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaagaaacacctattttcttca 26102555  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    |||||||| ||||||||||||||||||| ||||  |||| || ||| |||||||||||||  |||||||| |||||||    
T  26102554 taaaaaattatagttaatttataaaaatcgtaaatgagaatatcggtacaccgtaatttagaggtgtaccgtagaagt 26102477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 28494003 - 28494164
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||    
T  28494003 ttagtatgatttttctaaaaaatgaaatgatgcttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttca 28494095  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtacc 204  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| ||||| |||||| ||||||||||    
T  28494096 taaaaaatgatagttaatttataaaaa-tgtaagcaagagtaccggtacaccttaatttgcgggtgtacc 28494164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 82 - 193
Target Start/End: Original strand, 52303285 - 52303396
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttc-ttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  52303285 tataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaa-tgtaagtgagagtaccgg 52303383  T
Q  181 aacaccgtaattt 193  Q
     ||||| ||||||    
T  52303384 tacaccttaattt 52303396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 173
Target Start/End: Complemental strand, 29106538 - 29106408
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||| |  ||||||||||| |||||||||||    
T  29106538 ttagtatgatttttataaaaaatgaaatgatgttct-------ttcatataaaatgatattttctaaaatatacatatcaacaaacacatattttcttca 29106446  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgaga 173  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  29106445 taaaaaat-atagttaatttataaaaattgtaagcgaga 29106408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 16482849 - 16482926
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaa 160  Q
    ||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16482849 tataaaatgatattttctaaa-tctatatgtcaacaaacacctattttcttcataaaaaattatagttaatttataaaa 16482926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Complemental strand, 50239356 - 50239275
Alignment:
Q  137 aaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    |||||||||||||||||||||||  ||  |||  |||||||||| ||||| |||||| |||||||||| ||||||| |||||    
T  50239356 aaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagttcccta 50239275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 203
Target Start/End: Original strand, 23304685 - 23304800
Alignment:
Q  86 aaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacac 185  Q
    |||||||||||||||||||||| |  |||||||| | || |||  ||||| |||||| ||||||||||||||||  ||  |||  |||||||||| |||     
T  23304685 aaatgatattttctaaaatataaatatcaacaaatagct-tttatttcat-aaaaataatagttaatttataaatttttgaagtaagagtaccggtacat 23304782  T
Q  186 cgtaatttacgggtgtac 203  Q
    | ||||||||||||||||    
T  23304783 cttaatttacgggtgtac 23304800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 51184366 - 51184447
Alignment:
Q  137 aaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    |||||||||||||||||||||||  ||  |||  |||||||||| ||||| ||| ||  ||||||||||||||||| |||||    
T  51184366 aaaaatgatagttaatttataaatttttgaagtaagagtaccggcacaccttaaattgtgggtgtaccatagaagttcccta 51184447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 41073505 - 41073536
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatg 66  Q
    ||||||||||||||||||||||||||||||||    
T  41073505 ttagtatgatttttataaaaaatgaaatgatg 41073536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 159
Target Start/End: Original strand, 7122228 - 7122304
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaa 159  Q
    |||||||||||||||||||||||| |    |||||||| | || |||  ||||| |||||||||||||||||||||||    
T  7122228 tataaaatgatattttctaaaatacaagtatcaacaaataactttttatttcat-aaaaatgatagttaatttataaa 7122304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 5e-68; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 40650298 - 40650477
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40650298 ttagtatgatttttataaaaaatgaaatgatgtttttttt--cttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 40650395  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||    
T  40650396 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccgatacaccgtaatttacgagtgtaccatagaagtcccc 40650477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 35171368 - 35171190
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35171368 ttagtatgatttttataaaaaatgaaatgatgttttttt----ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 35171273  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  35171272 taaaaaatgatagttaatttataaaaattataagcgagagtaccggtacaccgtaatttacgggtgtaccatagaaatcccct 35171190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 35 - 216
Target Start/End: Complemental strand, 47948569 - 47948392
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||| ||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47948569 ttagtatgatttttataaaaaataaaatgatgttttttt----ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 47948474  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  47948473 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtcatttacgggtgtaccatagaagtcccc 47948392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 78 - 216
Target Start/End: Complemental strand, 42848328 - 42848190
Alignment:
Q  78 ttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtac 177  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42848328 ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgggagtac 42848229  T
Q  178 cggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    ||| ||||||| ||||||||||||| |||||||||||||    
T  42848228 cggtacaccgtcatttacgggtgtatcatagaagtcccc 42848190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 35 - 195
Target Start/End: Original strand, 31309111 - 31309264
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31309111 ttagtatgatttttataaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 31309203  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttac 195  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  31309204 taaaaaattatagttaatttataaaaattgtaaccgagagtaccggtacaccgtaatttac 31309264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 42067850 - 42067981
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42067850 tataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 42067949  T
Q  181 aacaccgtaatttacgggtgtaccatagaagt 212  Q
     ||||| |||||| |||||||||| |||||||    
T  42067950 tacaccttaatttgcgggtgtaccgtagaagt 42067981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 46959824 - 46959959
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||      
T  46959824 tataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaagttgtaagcgagagtaccgat 46959923  T
Q  182 acaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    |||||||||||| | |||||||| || |||| ||||    
T  46959924 acaccgtaatttgcaggtgtaccgtaaaagttccct 46959959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 29786708 - 29786537
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-c 133  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| |    
T  29786708 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacttattttctttc 29786616  T
Q  134 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||||| |||||||    
T  29786615 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttgcaggtgtaccgtagaagt 29786537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 876356 - 876221
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |     
T  876356 tataaaatgatattttctaaaatatatatgtcaacaaacaactattttcttcataaaaaatgatagttaaattataaaaattataagcgagagtaccagt 876257  T
Q  182 acaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||| |||||||| |||||||||| ||||||| ||||    
T  876256 acatcgtaatttgcgggtgtaccgtagaagttccct 876221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 44365841 - 44366016
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||| ||||||||||| ||||||||||||||||||  ||||    
T  44365841 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttttaaaatatatatgtcaacaaacacctatttctttca 44365933  T
Q  135 t-aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    | |||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  44365934 taaaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccggtacaccttaatttacgggtgtaccatagaagttccct 44366016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 38785256 - 38785086
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||||||||||||||||||||            ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38785256 ttagtatgatttttataaaaaatgaaatgatatttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 38785164  T
Q  135 taaaaaatgatagttaatttat-aaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    || ||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||| | |||||||| |||||||    
T  38785163 ta-aaaattatagttaatttataaaaaattgtaagcgagagtaccggtacaccgtaatttgcaggtgtaccgtagaagt 38785086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 42364102 - 42363927
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||||||||||||||||||||            ||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  42364102 ttagtatgatttttataaaaaatgaaatgatatttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttttttca 42364010  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    |||||||| |||||||| ||||||||||||||||| |||||||||  |||||||||||| | |||||||| ||||||| ||||    
T  42364009 taaaaaattatagttaaattataaaaattgtaagctagagtaccgatacaccgtaatttgcaggtgtaccgtagaagttccct 42363927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 44670432 - 44670263
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| |||||||||||| |||||  ||||    
T  44670432 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacttatttctttca 44670340  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||| |||||| |||||||    
T  44670339 taaaaaatgatagttaatttataaaaa-tgtaagcgaaagtaccggcacaccttaatttacggatgtaccgtagaagt 44670263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 11140518 - 11140647
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  || ||||||||||||||||  |||||||||| ||||||||||||||||||     
T  11140518 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttcttttataaaaaatgatagtttgtttataaaaa-tgtaagcgagagtaccggt 11140616  T
Q  182 acaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||| |||||| |||||||||| |||||||    
T  11140617 acaccttaatttgcgggtgtaccgtagaagt 11140647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 223
Target Start/End: Original strand, 45636320 - 45636502
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttc-ttc 133  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||| |||||||||| |||    
T  45636320 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaatacctattttctttc 45636412  T
Q  134 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaatata 223  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| | | |   ||||||||| ||||||| ||||||| |||| |||||    
T  45636413 ataaaaaatgatagttaatttataaaaattataagcgagtgtaccagtatattttaatttacgagtgtaccgtagaagttcccttatata 45636502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 378712 - 378598
Alignment:
Q  106 tataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtacca 205  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||| ||  ||||||| |||| |||||||||||||||||||    
T  378712 tatatgtcaacaaacacttattttcttcataaaaaatgatagttaatttataaaaatt-aaagtgatggtaccggtacactgtaatttacgggtgtacca 378614  T
Q  206 tagaagtcccctaata 221  Q
    ||||||||||| ||||    
T  378613 tagaagtccccaaata 378598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 29347389 - 29347315
Alignment:
Q  138 aaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| | ||||| |||||||||| |||||||    
T  29347389 aaaatgatagttaatttataaaaattgtaagcgagagtaccggtacactgcaatttgcgggtgtaccgtagaagt 29347315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 37492189 - 37492247
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaa 140  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  37492189 tataaaatgatattttttaaaatatatatgtcaacaaacacctattttcttcataaaaa 37492247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 4660031 - 4660099
Alignment:
Q  86 aaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaattt 154  Q
    |||| ||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  4660031 aaattatattttttaaaatatatatgtcaacaaacagctatttttttcataaaaaatgatagttaattt 4660099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 39630023 - 39629952
Alignment:
Q  141 atgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| | |||||| ||| |||||| |||||||    
T  39630023 atgatagttaatttataaaaattgtaagcgatagtaccggtacatcttaatttgcggatgtaccgtagaagt 39629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 52082172 - 52082047
Alignment:
Q  86 aaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacac 185  Q
    |||||||||||||||||||||| |  |||||||| | || |||  ||||| |||||| |||||| |||||||||  ||  |||  |||||||||| ||||    
T  52082172 aaatgatattttctaaaatataaatatcaacaaataactttttatttcat-aaaaataatagttcatttataaatttttgaagtaagagtaccggtacac 52082074  T
Q  186 cgtaatttacgggtgtaccatagaagt 212  Q
    | |||||| |||||||||| |||||||    
T  52082073 cttaatttgcgggtgtaccgtagaagt 52082047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 37492241 - 37492298
Alignment:
Q  155 ataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| |||||| |||||||    
T  37492241 ataaaaattataagcgagagtaccggtacaccgtaatttgcggatgtaccgtagaagt 37492298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 42848381 - 42848350
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatg 66  Q
    ||||||||||||||||||||||||||||||||    
T  42848381 ttagtatgatttttataaaaaatgaaatgatg 42848350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 39678379 - 39678457
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaa 160  Q
    ||||||||||| || | ||||||||| |  | |||||| | ||||||  ||||||||||||||| ||||||||||||||    
T  39678379 tataaaatgatgttctataaaatataaatattaacaaatagctatttatttcataaaaaatgatcgttaatttataaaa 39678457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 5e-68; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 35 - 216
Target Start/End: Complemental strand, 42427748 - 42427568
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42427748 ttagtatgatttttataaaaaatgaaatgatgttttttttt-cttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 42427650  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||    
T  42427649 taaaaaatgatagttaatttataaaaattgtaagcaagagtatcggtacaccgtaatttacgggtgtaccatagaagtcccc 42427568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 3383366 - 3383195
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||| ||||||||||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3383366 ttagtataatttttataaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 3383274  T
Q  135 taaaaaa-tgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| |||||||    
T  3383273 taaaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtacaccgtaatttacggatgtaccgtagaagt 3383195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 35 - 211
Target Start/End: Complemental strand, 15771483 - 15771314
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||| ||||||||||||||||||||||           ||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| |    
T  15771483 ttagtatgacttttataaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacttattttcttta 15771391  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaag 211  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  15771390 taaaaaatgatagttaatttataaaaattataagcgagagtaccggtacaccttaatttacgggtgtaccgtagaag 15771314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 4673776 - 4673600
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-c 133  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  4673776 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttc 4673684  T
Q  134 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||||| ||||||| ||||    
T  4673683 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttgcaggtgtaccttagaagttccct 4673600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 82 - 218
Target Start/End: Complemental strand, 14532958 - 14532822
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||      
T  14532958 tataaaatgatattttctaaaatatatatgttaacaaacacctattttcttcataaaaaatgatagttaaattataaaaattgtaagcgagagtatcgat 14532859  T
Q  182 acaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    |||||||||||| |||||||||| ||||||| |||||    
T  14532858 acaccgtaatttgcgggtgtaccgtagaagttcccta 14532822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 82 - 210
Target Start/End: Complemental strand, 11813327 - 11813198
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11813327 tataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 11813228  T
Q  181 aacaccgtaatttacgggtgtaccatagaa 210  Q
     ||||| ||||||  ||||||||| |||||    
T  11813227 tacaccttaatttgtgggtgtaccgtagaa 11813198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 37083482 - 37083618
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  37083482 tataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccga 37083581  T
Q  181 aacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
     ||||| |||||| ||| |||||| ||||||| ||||    
T  37083582 tacaccttaatttgcggatgtaccgtagaagttccct 37083618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 34665843 - 34665979
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  34665843 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaataatagttaatttataaaaa-tgtaagcgagagtaccggt 34665941  T
Q  182 acaccgtaatttacgggtgtaccatagaagtcccctaa 219  Q
    ||||| |||||| |||||||||| ||||||| ||||||    
T  34665942 acaccttaatttgcgggtgtaccgtagaagttccctaa 34665979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 35 - 219
Target Start/End: Complemental strand, 5389375 - 5389199
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| |||||||||||| |||||  ||||    
T  5389375 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacatatttctttca 5389283  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaa 219  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||| ||||| |||||| |||||||||| ||||||| ||||||    
T  5389282 taaaaaatgatagttaatttataaaaa-tgtaagcgagagtgccggtacaccttaatttgcgggtgtaccgtagaagttccctaa 5389199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 59150 - 59321
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||||||||||||||||||||            ||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  59150 ttagtatgatttttataaaaaatgaaatgatatttt-------ttcttataaaattatattttctaaaatatatatgtcaacaaacacctattttcttca 59242  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgt-aatttacgggtgtaccatagaagt 212  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||| | | ||||| | |||||||| |||||||    
T  59243 taaaaaattatagttaatttataaaaattgtaagcgagagtaccggtacatcataaatttgcaggtgtaccgtagaagt 59321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 33423168 - 33423048
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  33423168 tataaaatgatattttttaaaatatatatgtcaacaaacagctatttttttcattaaaaatgatagttaatttataaaaattgtaagcgagagtaccggt 33423069  T
Q  182 acaccgtaatttacgggtgta 202  Q
    |||||||||||| ||| ||||    
T  33423068 acaccgtaatttgcggatgta 33423048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 82 - 193
Target Start/End: Complemental strand, 3810584 - 3810473
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||     
T  3810584 tataaaatgatattttctaaaatatatatgtcaaaaaacacctattttcttcataaaaaataatagttaatttataaaaattgtaagcgaaagtaccggt 3810485  T
Q  182 acaccgtaattt 193  Q
    ||||| ||||||    
T  3810484 acaccttaattt 3810473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 1353779 - 1353908
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||| ||     
T  1353779 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaattatagttaatttataaaaa-tgtaagcgagagtactggt 1353877  T
Q  182 acaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||| |||||| |||||||||| |||||||    
T  1353878 acaccttaatttgcgggtgtaccgtagaagt 1353908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 35 - 195
Target Start/End: Original strand, 6884391 - 6884547
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggt--caacaaacacctattttctt 132  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||| |||||||||  |  ||||||||||||||||||||    
T  6884391 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttcttaaatatatatatatcaacaaacacctattttctt 6884483  T
Q  133 -cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttac 195  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  6884484 tcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttac 6884547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 11227859 - 11228029
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatatt-ttctaaaatatataggtcaacaaacacctattttcttc 133  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||| ||||| |||||||||||||| ||||||||||||||||||  |||    
T  11227859 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaataatattattctaaaatatatatgtcaacaaacacctatttctttc 11227951  T
Q  134 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |  ||||| |||||| | |||||||| |||||||    
T  11227952 ataaaaaatgatagttaatttataaaaa-tgtaagcgagagtactgatacaccttaatttgcaggtgtaccgtagaagt 11228029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 38963202 - 38963071
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcat--aaaaaatgatagttaatttataaaaattgtaagcgagagtaccg 179  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  || ||  |||||||||||||||||||||||||| |||||||||||||||||    
T  38963202 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttcttttataaaaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccg 38963104  T
Q  180 gaacaccgtaatttacgggtgtaccatagaagt 212  Q
    |  |||| |||||| | |||||| | |||||||    
T  38963103 gtgcaccttaatttgcaggtgtaacgtagaagt 38963071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 6438346 - 6438171
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||| ||||||||||||           ||| ||| |||||||||||||||||||||| |  |||||||| | || |||  ||||    
T  6438346 ttagtatgatttttataaacaatgaaatgatgttttt------ttcttatgaaatgatattttctaaaatataaatatcaacaaatagctttttatttca 6438253  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    | |||||| ||||||||||||||||  ||  ||   |||||||||| ||||| |||||||||| | |||| ||||||| ||||    
T  6438252 t-aaaaattatagttaatttataaatttttgaattaagagtaccggcacaccttaatttacggatttaccgtagaagttccct 6438171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 34438226 - 34438186
Alignment:
Q  177 ccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    |||| ||||| ||||||||||||||||||||||||| ||||    
T  34438226 ccggtacaccttaatttacgggtgtaccatagaagttccct 34438186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 2e-67; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 3056667 - 3056808
Alignment:
Q  81 atataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3056667 atataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 3056766  T
Q  181 aacaccgtaatttacgggtgtaccatagaagtcccctaatat 222  Q
     ||||||||||||||| |||||||||||||||||||||||||    
T  3056767 tacaccgtaatttacgagtgtaccatagaagtcccctaatat 3056808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 36339019 - 36338843
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  36339019 ttagtatgatttttataaaaaatgaaatgatgttct-------ttcatataaaatgatattttccaaaatatacatgtcaacaaacacctattttcttca 36338927  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  36338926 taaaaaatgatagttaatttataaaaattgtaagcgagagtactggtacaccgtaatttacgggtgtaccatagaagtccccta 36338843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 35 - 220
Target Start/End: Complemental strand, 18228635 - 18228456
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||| ||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  18228635 ttagtattatttttataaaaaatgaaatgatgttttt------ttcatataaaatgatattttctaaaatatatatgtcaacaaacacgtattttcttca 18228542  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaat 220  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  18228541 taaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtagaccgtaatttacgggtgtaccatagaaatcccctaat 18228456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 39 - 218
Target Start/End: Complemental strand, 1661865 - 1661690
Alignment:
Q  39 tatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaa 138  Q
    ||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  1661865 tatgatttttataaaaaatgaaatgatgttttttt----ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctatttttttcataaa 1661770  T
Q  139 aaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||    
T  1661769 aaatgatagttaatttataaaaattgtaagcgagagcaccggtacaccgtaatttacaggtgtaccatataagtccccta 1661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 2141473 - 2141650
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||| ||||||||||||||||  ||||||||||| |||||||||||    
T  2141473 ttagtatgatttttataaaaaatgaaatgatgttttt------ttcatataaaatgatgttttctaaaatatatatatcaacaaacacttattttcttca 2141566  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  2141567 taaaaaatgatagttaatttataaaaattgtaagcgagagtaacggtacaccgtaatttatgggtgtaccatagaagtccccta 2141650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 2414155 - 2414331
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  2414155 ttagtatgatttttataaaaaatgaaatgatgttttt------ttcatataaaatgatgttttctaaaatatatatgtcaacaaacacttattttcttca 2414248  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  |||| ||||||||||| |||||||||||||||||||    
T  2414249 taaaaaatgatagttaatttataaaaattgtaagtgagagtaccgttacactgtaatttacggatgtaccatagaagtcccct 2414331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 9535098 - 9535273
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  9535098 ttagtatgatttttataaaaaatgaaatgatgttttt------ttcatataaaatgatgttttctaaaatatatatgtcaacaaacacttattttcttca 9535191  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  ||||  |||||||||||||||||||||||||||||    
T  9535192 taaaaaatgatagttaatttataaaaattgtaagtgagagtaccgttacactttaatttacgggtgtaccatagaagtcccc 9535273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 32467275 - 32467445
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||||||||||||||||||||            ||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  32467275 ttagtatgatttttataaaaaatgaaatgatatttt-------ttcttataaaatgatattttctgaaatatatatgtcaacaaacacctattttcttca 32467367  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||| |||||||    
T  32467368 taaaaaatgatagttaatttataaaaattgcaagcgagagtaccggtacaccgtaatttgcgggtgtaccgtagaagt 32467445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 43237529 - 43237354
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||||||||||||||||||||            ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  43237529 ttagtatgatttttataaaaaatgaaatgatatttt-------ttcttataaaatgatattttctaaaatatatatgtcaaccaacacctattttcttca 43237437  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||  |||||||||||| | |||||||||||||||| ||||    
T  43237436 taaaaaattataattaatttataaaaattgtaagcgagagtaccgatacaccgtaatttgcaggtgtaccatagaagttccct 43237354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 6561058 - 6561228
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||||||||||||||||||||            ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6561058 ttagtatgatttttataaaaaatgaaatgatatttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 6561150  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||| |||||||||||| | |||||||| |||||||    
T  6561151 taaaaaattatagttaatttataaaaattgtaagcaagaataccggtacaccgtaatttgcaggtgtaccgtagaagt 6561228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 13410813 - 13410944
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13410813 tataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 13410912  T
Q  181 aacaccgtaatttacgggtgtaccatagaagt 212  Q
     ||||| |||||| ||| |||||| |||||||    
T  13410913 tacaccttaatttgcggatgtaccgtagaagt 13410944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 34302880 - 34303050
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||||||||||||||||||||            ||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  34302880 ttagtatgatttttataaaaaatgaaatgatatttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttttttca 34302972  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    |||||||| |||||||||||||||||||| |||| ||||||||||| |||||||||||| | |||||||| |||||||    
T  34302973 taaaaaattatagttaatttataaaaattataagtgagagtaccggtacaccgtaatttgcaggtgtaccgtagaagt 34303050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 220
Target Start/End: Original strand, 6532812 - 6532990
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||            || |||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  6532812 ttagtatgatttttataaaaaatgaaatgatgtttta-------tcttataaaatgatattttctaaaatatatatgttaacaaacacctattttcttca 6532904  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaat 220  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||  |||||||||||| ||| |||||  || |||| |||||||    
T  6532905 taaaacatgatagttaaattataaaaattgtaagcgagagtatcgatacaccgtaatttgcggatgtacagtaaaagttccctaat 6532990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 82 - 197
Target Start/End: Original strand, 21605921 - 21606037
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21605921 tataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaacttataaaaattgtaagcgagagtaccgg 21606020  T
Q  181 aacaccgtaatttacgg 197  Q
     ||||| ||||||||||    
T  21606021 tacaccttaatttacgg 21606037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 83 - 217
Target Start/End: Original strand, 24098143 - 24098277
Alignment:
Q  83 ataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaa 182  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||| || |||||||||||||||||||||||||||| | |    
T  24098143 ataaaatgatattttctaaaatatatatgtcaacaaagacttattttcttcataaaaaatgatattttatttataaaaattgtaagcgagagtaccagta 24098242  T
Q  183 caccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||||||| | |||||||  ||||||| ||||    
T  24098243 caccgtaatttgcaggtgtactgtagaagttccct 24098277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 82 - 179
Target Start/End: Complemental strand, 6318420 - 6318323
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccg 179  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  6318420 tataaaatgatattttctaaaatatatatgtcaacaaatacctattttcttcgtaaaaaattatagttaatttataaaaattgtaagcgagagtaccg 6318323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 2029585 - 2029719
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||            || |||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  2029585 ttagtatgatttttataaaaaatgaaatgatgtttta-------tcttataaaataatattttctaaaatatataagtcaacaaacacctattttcttca 2029677  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagta 176  Q
    |||||||||| |||||| ||||||||||||||||||||||||    
T  2029678 taaaaaatgacagttaaattataaaaattgtaagcgagagta 2029719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 6113908 - 6113809
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6113908 tataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattataagcgagagtaccgg 6113809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 42917390 - 42917520
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcat-aaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  42917390 tataaaatgatattttctaaaatatatatttcaacaaacacctatttctttcataaaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccgg 42917488  T
Q  181 aacaccgtaatttacgggtgtaccatagaagt 212  Q
     ||||| ||||||  |||||||||||| ||||    
T  42917489 tacaccttaatttgtgggtgtaccataaaagt 42917520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 220
Target Start/End: Original strand, 13091144 - 13091323
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||| ||||||||||||           ||| ||| |||||||||||||||||||||| |  |||||||| | || |||  ||||    
T  13091144 ttagtatgatttttataaacaatgaaatgatgtttttt-----ttcttatgaaatgatattttctaaaatataaatatcaacaaatagctttttatttca 13091238  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaat 220  Q
    |||||| ||||||||||||||||||  ||  |||  |||||||||| ||||| ||||||||||||||||| ||||||| |||||||    
T  13091239 taaaaa-tgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttacgggtgtaccgtagaagttccctaat 13091323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 22780745 - 22780915
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||||||||||||||||||||            ||| ||| ||||||||||||||||| |||| | ||||||||||| ||||||| ||||    
T  22780745 ttagtatgatttttataaaaaatgaaatgataattt-------ttcttatgaaatgatattttctaaactataaatgtcaacaaacaactatttttttca 22780837  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
     ||||||||||||||||||||||||  || ||| | ||||| |||| ||| | |||||| |  ||||||| |||||||    
T  22780838 caaaaaatgatagttaatttataaattttttaaacaagagtgccggtacatcttaatttgcaagtgtaccgtagaagt 22780915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 14967462 - 14967638
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||| ||||||||||||           ||| ||| |||||||||||||||||||||| |  |||||||| | || |||  ||||    
T  14967462 ttagtatgatttttataaacaatgaaatgatgcttttt-----ttcttatgaaatgatattttctaaaatatagatatcaacaaatagctttttatttca 14967556  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    | |||||||||||||||||||||||  ||  |||  |||||||||  ||||| |||||| | |||||||| ||||||| ||||    
T  14967557 t-aaaaatgatagttaatttataaatttttgaagtaagagtaccgatacaccttaatttgcaggtgtaccgtagaagttccct 14967638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 3056616 - 3056647
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatg 66  Q
    ||||||||||||||||||||||||||||||||    
T  3056616 ttagtatgatttttataaaaaatgaaatgatg 3056647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 6318461 - 6318431
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgat 65  Q
    |||||||||||||||||||||||||||||||    
T  6318461 ttagtatgatttttataaaaaatgaaatgat 6318431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 9589485 - 9589610
Alignment:
Q  86 aaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacac 185  Q
    ||||||||||||||||| |||| |  |||||||| | || |||  ||||||||| |||||||||||||||||||  ||  |||  |||||||||  ||||    
T  9589485 aaatgatattttctaaagtataaatatcaacaaatagctttttatttcataaaa-atgatagttaatttataaatttttgaagtaagagtaccgatacac 9589583  T
Q  186 cgtaatttacgggtgtaccatagaagt 212  Q
    | ||||||  || |||||| |||||||    
T  9589584 cttaatttgtggatgtaccgtagaagt 9589610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 159
Target Start/End: Original strand, 29744135 - 29744251
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||| ||||||||||||           ||| ||| |||||||||||||||||||||| |  |||| ||| | || |||  ||||    
T  29744135 ttagtatgatttttataaataatgaaatgatgtttt-------ttcttatgaaatgatattttctaaaatataaatatcaataaatagctctttatttca 29744227  T
Q  135 taaaaaatgatagttaatttataaa 159  Q
    ||||| |||||||||||||||||||    
T  29744228 taaaa-atgatagttaatttataaa 29744251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 3e-63; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 78 - 216
Target Start/End: Complemental strand, 34280362 - 34280224
Alignment:
Q  78 ttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtac 177  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34280362 ttcatataaaatgatattttttaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtac 34280263  T
Q  178 cggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    ||| |||||| ||||||||||||||||||||||||||||    
T  34280262 cggtacaccgcaatttacgggtgtaccatagaagtcccc 34280224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 35 - 216
Target Start/End: Complemental strand, 33076157 - 33075979
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  33076157 ttagtatgatttttataaaaaatgaaatgatgttttttt----ttcgtataaaataatattttctaaaatatatatgtcaacaaacacctattttcttca 33076062  T
Q  135 taaaaaa-tgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33076061 taaaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 33075979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 46041932 - 46042107
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||||||| |||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  46041932 ttagtatgatttttataacaaatgaaatgatgttttt------ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 46042025  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||| ||||||||||||||||| |||||    
T  46042026 taaaaaatgatagttaatttataaaaattataaacgagagtaccggtacatcgtaattcacgggtgtaccatagaaatcccc 46042107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 47302252 - 47302382
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  47302252 tataaaatgatattttttaaaatatatatgtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattataagcgagagtaccggt 47302351  T
Q  182 acaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||||||||||||||||||||| |||||||    
T  47302352 acaccgtaatttacgggtgtaccgtagaagt 47302382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 52589302 - 52589480
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  52589302 ttagtatgatttttataaaaaatgaaatgatgtttttt-----ttcatataaaatgatattttctaaaatatatatgtcaataaacacctattttcttca 52589396  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    |||||||| |||||||||||||||||||| ||| | |||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  52589397 taaaaaattatagttaatttataaaaattataaacaagagtatcggtacaccgtaatttacgagtgtaccatagaagtccccta 52589480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 216
Target Start/End: Original strand, 27539147 - 27539323
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  27539147 ttagtatgatttttataaaaaatgaaatgatgtttttt-----ttcatataaaatgatattttctaaaatatatatatcaacaaacacctattttcttca 27539241  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccc 216  Q
    |||||||| |||||||||||||||||||| ||||| |||||||||| ||||| |||||||||| |||||||||||| |||||    
T  27539242 taaaaaattatagttaatttataaaaattataagcaagagtaccggtacaccataatttacggatgtaccatagaaatcccc 27539323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 221
Target Start/End: Complemental strand, 37519139 - 37518960
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||          |||| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  37519139 ttagtatgatttttataaaaaatgaaatgatgttt-------cttcttataaaattatattttctaaaatatatatgtcaacaaacacttattttcttca 37519047  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  | || |||||||||||||||||| ||||||| ||||||||    
T  37519046 taaaaaatgatagttaatttataaaaattgtaagcgagagtactgatatactgtaatttacgggtgtaccgtagaagttccctaata 37518960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 221
Target Start/End: Complemental strand, 37523355 - 37523176
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||          |||| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||    
T  37523355 ttagtatgatttttataaaaaatgaaatgatgttt-------cttcttataaaattatattttctaaaatatatatgtcaacaaacacttattttcttca 37523263  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaata 221  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  | || |||||||||||||||||| ||||||| ||||||||    
T  37523262 taaaaaatgatagttaatttataaaaattgtaagcgagagtactgatatactgtaatttacgggtgtaccgtagaagttccctaata 37523176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 30539841 - 30539966
Alignment:
Q  91 atattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaa 190  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  30539841 atattttctaaaatatatatgtcaacaaacacctatttttttcataaaaaatgatagttaatttataaaaattataagcgagagtaccagtacaccgtaa 30539940  T
Q  191 tttacgggtgtaccatagaagtcccc 216  Q
    ||||||||||||||||||||||||||    
T  30539941 tttacgggtgtaccatagaagtcccc 30539966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 80 - 221
Target Start/End: Complemental strand, 43137507 - 43137366
Alignment:
Q  80 catataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccg 179  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||||||||    
T  43137507 catataaaatgatattttttaaaatatatatgtcaacaaacacctattttctttacaaaaaatgatagttaatttattaaaattgtaagtgagagtaccg 43137408  T
Q  180 gaacaccgtaatttacgggtgtaccatagaagtcccctaata 221  Q
      ||||||||||| ||||||||||||||||||||||||||||    
T  43137407 atacaccgtaattcacgggtgtaccatagaagtcccctaata 43137366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 3716557 - 3716732
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||||||||||||||||||||            ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3716557 ttagtatgatttttataaaaaatgaaatgatatttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 3716649  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |  ||||||| ||||||| ||||    
T  3716650 taaaaaattatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttccaagtgtaccgtagaagttccct 3716732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 48579040 - 48578906
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  48579040 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccggt 48578942  T
Q  182 acaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||| ||||||||||||||||| ||||||| ||||    
T  48578941 acaccttaatttacgggtgtaccgtagaagttccct 48578906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 41759792 - 41759663
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  41759792 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccggt 41759694  T
Q  182 acaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||  ||||||||||||||||| |||||||    
T  41759693 acactttaatttacgggtgtaccgtagaagt 41759663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 91 - 224
Target Start/End: Original strand, 52592074 - 52592207
Alignment:
Q  91 atattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaa 190  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||||||    
T  52592074 atattttctaaaatatatatgtcaacaaacacttattttcttcataaaaaatgataattactttataaaaattgtatgcgagagtaccggtacaccgtaa 52592173  T
Q  191 tttacgggtgtaccatagaagtcccctaatatat 224  Q
    ||||||| |||||| ||||||| ||||| |||||    
T  52592174 tttacggatgtaccgtagaagttccctattatat 52592207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 55722750 - 55722886
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  55722750 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttcataaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccggt 55722848  T
Q  182 acaccgtaatttacgggtgtaccatagaagtcccctaa 219  Q
    ||||| |||||| |||||||||| || |||| ||||||    
T  55722849 acaccttaatttgcgggtgtaccgtaaaagttccctaa 55722886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 82 - 220
Target Start/End: Original strand, 38836122 - 38836260
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| |||||||| |||| ||||||||||||||||||      
T  38836122 tataaaatgatattttctaaaatatatatgtcaacaaacacctatttttttcataaaaaattataattaatttacaaaagttgtaagcgagagtaccgat 38836221  T
Q  182 acaccgtaatttacgggtgtaccatagaagtcccctaat 220  Q
    |||||||||||| | |||||||| ||||||| |||||||    
T  38836222 acaccgtaatttgcaggtgtaccgtagaagttccctaat 38836260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 37855393 - 37855524
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  37855393 tataaaatgatattttctaaaatatatatgtcaacaaacacttattttctttcataaaaaatgacagttaatttataaaaattgtaagcgagggtaccgg 37855492  T
Q  181 aacaccgtaatttacgggtgtaccatagaagt 212  Q
     ||||| |||||||| | |||||| |||||||    
T  37855493 tacaccttaatttacagatgtaccgtagaagt 37855524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 30343097 - 30343230
Alignment:
Q  82 tataaaatgatattttctaaaatatatag--gtcaacaaacacctattttcttcataaaa-aatgatagttaatttataaaaattgtaagcgagagtacc 178  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |    
T  30343097 tataaaatgatattttctaaaatatatatatgtcaacaaacacctattttcttcataaaaaaatgatagttaatttataaaaattgtaagtgagagtagc 30343196  T
Q  179 ggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    || | |||||||||| |||||||||| |||||||    
T  30343197 ggtaaaccgtaatttgcgggtgtaccgtagaagt 30343230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 82 - 217
Target Start/End: Complemental strand, 11109732 - 11109595
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaa-tgatagttaatttataaaaattgtaagcgagagtaccg 179  Q
    |||||||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  11109732 tataaaatgatattttctaaaatatatatgtcaacaaacatcaattttctttcataaaaaaatgatagttaatttataaaaattttaagcgagagtaccg 11109633  T
Q  180 gaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    | ||||| |||||| |||||||||| ||||||| ||||    
T  11109632 gtacaccttaatttgcgggtgtaccgtagaagttccct 11109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 82 - 180
Target Start/End: Original strand, 14802984 - 14803083
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14802984 tataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 14803083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 51435987 - 51435811
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| ||||||||| |||||||||||||||||| ||||||||||||||||||  ||||    
T  51435987 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatggtattttctaaaatatatatgtcaacaaacacctatttctttca 51435895  T
Q  135 taaaaaa-tgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||| |||||||||||||| ||||| |||||  |||||| |||| ||||| |||||| |||||||||||||||||| ||||    
T  51435894 taaaaaaatgatagttaatttaaaaaaaatgtaaatgagagttccggtacaccttaatttgcgggtgtaccatagaagttccct 51435811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 53389020 - 53388850
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||    
T  53389020 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttca 53388928  T
Q  135 taa-aaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    ||| |||||||| ||||||||||||||| ||||| |||||||||||| ||||| |||||| | | ||||||||||||||    
T  53388927 taaaaaaatgatggttaatttataaaaa-tgtaaacgagagtaccggtacaccttaatttgcagatgtaccatagaagt 53388850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 28037957 - 28038087
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcat-aaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  28037957 tataaaatgatattttctaaaatatatatttcaacaaaaacctatttctttcataaaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccgg 28038055  T
Q  181 aacaccgtaatttacgggtgtaccatagaagt 212  Q
     ||||| ||||||  ||||||||| |||||||    
T  28038056 tacaccttaatttgtgggtgtaccgtagaagt 28038087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 36091289 - 36091460
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||| ||||||||||||           ||| ||| |||||||||||||||||||| | |  |||||||| | || |||  ||||    
T  36091289 ttagtatgatttttataaacaatgaaatgatgtttttt-----ttcttatgaaatgatattttctaaaatacaaatatcaacaaatagctttttatttca 36091383  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||| |||||||||||||||||||  ||  |||  |||||||||| ||||| |||||||| |||||||| |||||||    
T  36091384 taaaa-atgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttacaggtgtaccgtagaagt 36091460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 9858522 - 9858651
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||||||||||||| |  |||||||| | || |||  ||||| |||||| ||||||||||||||||  ||  |||  ||||||||||     
T  9858522 tataaaatgatattttctaaaatataaatatcaacaaatagctttttatttcat-aaaaataatagttaatttataaatttttgaagtaagagtaccggt 9858620  T
Q  182 acaccgtaatttacgggtgtaccatagaagt 212  Q
    ||||| |||||| | |||||||| |||||||    
T  9858621 acaccttaatttgcaggtgtaccgtagaagt 9858651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 31908719 - 31908844
Alignment:
Q  86 aaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacac 185  Q
    |||||||||||| ||||||||| |  |||||||| | || |||  |||||||||  ||||||||||||||||||  ||  |||  |||||||||| ||||    
T  31908719 aaatgatattttttaaaatataaatatcaacaaatagctttttatttcataaaat-tgatagttaatttataaatttttgaagtaagagtaccggtacac 31908817  T
Q  186 cgtaatttacgggtgtaccatagaagt 212  Q
    | |||||| |||||||||| |||||||    
T  31908818 cttaatttgcgggtgtaccgtagaagt 31908844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 43147803 - 43147843
Alignment:
Q  123 ctattttcttcataaaaaatgatagttaatttataaaaatt 163  Q
    |||||| || ||||||||||||| |||||||||||||||||    
T  43147803 ctatttactacataaaaaatgatcgttaatttataaaaatt 43147843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 35 - 215
Target Start/End: Original strand, 38502415 - 38502595
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnn-cttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttc 133  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38502415 ttagtatgatttttataaaaaatgaaatgatgtttttttttttcttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttc 38502514  T
Q  134 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccc 215  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  38502515 ataaaa-atgatagttaatttataaaaattgtaagcgagaataccgatacaccgtaatttacgggtgtaccatagaagtccc 38502595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 35 - 222
Target Start/End: Complemental strand, 14498479 - 14498298
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||| ||||||||||||||||||||||||           |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  14498479 ttagtattatttttataaaaaatgaaatgatgttttt------ttcatataaaataatattttctaaaatatatatgtcaacaaacacctattttcttca 14498386  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaatat 222  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| ||||| |||||    
T  14498385 taaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtagaccgtaatttacgggtgtaccatagaaatccccaaatat 14498298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 36002588 - 36002766
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  36002588 ttagtatgatttttataaaaaatgaaatgatgttttttt----ttcatataaaatgatattttctaaaatagatatgtcaacaaacacctattttcttca 36002683  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    |||||||| |||||||||||||||||||||||| ||||||||| | | ||||||||||||| | |||||||||||||||||||    
T  36002684 taaaaaataatagttaatttataaaaattgtaaacgagagtactgaagcaccgtaatttacagatgtaccatagaagtcccct 36002766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 220
Target Start/End: Complemental strand, 15726064 - 15725886
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||||||||||||||||||||            ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15726064 ttagtatgatttttataaaaaatgaaatgatatttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 15725972  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaat 220  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||| ||||||| |||||||    
T  15725971 taaaaaattatagttaatttataaaaattgtaagcgagagtatcggtacaccgtaatttgcaggtgtaccgtagaagttccctaat 15725886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 35 - 224
Target Start/End: Original strand, 946201 - 946385
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  946201 ttagtatgatttttataaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacttattttcttca 946293  T
Q  135 taaaa--aatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccctaatatat 224  Q
    |||||  ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||| ||||||| |||||| ||||    
T  946294 taaaaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtacaccgtaatttgcgggtgtaccgtagaagttccctaaaatat 946385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 39 - 210
Target Start/End: Original strand, 10280795 - 10280960
Alignment:
Q  39 tatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaa 138  Q
    ||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10280795 tatgatttttataaaaaatgaaatgatgttttt------ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttcataaa 10280888  T
Q  139 aaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaa 210  Q
    |||||||| |||||||||||||||| ||| |||||||||||  ||||||||||| |||||||||||||||||    
T  10280889 aaatgataattaatttataaaaattataaacgagagtaccgatacaccgtaattcacgggtgtaccatagaa 10280960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 29459866 - 29460042
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-c 133  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  29459866 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctattttctttc 29459958  T
Q  134 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||||| ||||||| ||||    
T  29459959 ataaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttgcaggtgtaccgtagaagttccct 29460042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 37511360 - 37511500
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca-taaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  37511360 tataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttaataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 37511459  T
Q  181 aacaccgtaatttacgggtgtaccatagaagtcccctaata 221  Q
     ||||| |||||||||| |||||| ||||||| ||||||||    
T  37511460 tacaccttaatttacggatgtaccgtagaagttccctaata 37511500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 37161736 - 37161921
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37161736 ttagtatgatttttataaaaaatgaaatgatgtttttttt---ttcatataaaatgatattttctaaaatatatatgtcaacaaacacctattttcttca 37161832  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgaga------gtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    |||||||| |||||||||||||||||||| |||||||||      |||| || |||||||||||||||| |||||||||||||| ||||    
T  37161833 taaaaaattatagttaatttataaaaattataagcgagagtactggtactggtacaccgtaatttacggatgtaccatagaagttccct 37161921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 34332344 - 34332518
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||    
T  34332344 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttca 34332436  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||||    
T  34332437 taaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccggtacaccttaatttgcgggtgtaccgtagaagttccct 34332518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 82 - 211
Target Start/End: Complemental strand, 29229310 - 29229181
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaa-tgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  29229310 tatacaatgatattt-ctaaaatatatatgtcaacaaacacctattttcttcataaaaaagtgatagttaatttataaaaattgtaagtgagagtaccgg 29229212  T
Q  181 aacaccgtaatttacgggtgtaccatagaag 211  Q
     ||||||||||||||||||||||| ||||||    
T  29229211 tacaccgtaatttacgggtgtaccgtagaag 29229181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 35 - 218
Target Start/End: Original strand, 44935131 - 44935306
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||    
T  44935131 ttagtatgatttttgtaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttca 44935223  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||| ||||| ||| || |||||||||| ||||||| |||||    
T  44935224 taaaaaatgatagttaatttataaaaa-tgtaaccgagagtaccggtacaccttaaattgcgggtgtaccgtagaagttcccta 44935306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 28090423 - 28090597
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||| ||||||  ||||    
T  28090423 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacatctatttctttca 28090515  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| || |||||||||| ||||||| ||||    
T  28090516 taaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccggtacaccttaaattgcgggtgtaccgtagaagttccct 28090597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 29773677 - 29773851
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||    
T  29773677 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttca 29773769  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||| ||||| ||| || |||||||||| ||||||| ||||    
T  29773770 taaaaaatgatagttaatttataaaaa-tgtaagcgaaagtaccggtacaccttaaattgcgggtgtaccgtagaagttccct 29773851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 12163115 - 12162952
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||| ||||||||||||||||||||||           ||| |||||||||||||||||||||||||||  ||||||||||||||||||||| ||    
T  12163115 ttagtatgaattttataaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatctgtcaacaaacacctattttctaca 12163023  T
Q  135 taaaaaa-tgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtacc 204  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||| ||||    
T  12163022 taaaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtacactgtaatttgcgggtatacc 12162952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 12407543 - 12407380
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||| ||||||||||||||||||||||           ||| |||||||||||||||||||||||||||  ||||||||||||||||||||| ||    
T  12407543 ttagtatgaattttataaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatctgtcaacaaacacctattttctaca 12407451  T
Q  135 taaaaaa-tgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtacc 204  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||| ||||    
T  12407450 taaaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtacactgtaatttgcgggtatacc 12407380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 23274895 - 23275026
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagta-ccgg 180  Q
    |||||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  23274895 tataaaatgatattttctaaaatgcatatgtcaaaaaacacctattttcttcataaaaaataatagttaatttataaaaattgtaagcgagagtacccgg 23274994  T
Q  181 aacaccgtaatttacgggtgtaccatagaagt 212  Q
     ||||| |||||| |||||||| | |||||||    
T  23274995 tacaccttaatttgcgggtgtatcgtagaagt 23275026  T

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Target: chr8; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 35 - 193
Target Start/End: Complemental strand, 39171255 - 39171105
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||  || |    
T  39171255 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttta 39171163  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaattt 193  Q
    ||||||||||||||||||||||||||| ||||||||||||||| || ||||| ||||||    
T  39171162 taaaaaatgatagttaatttataaaaa-tgtaagcgagagtactggtacaccttaattt 39171105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 23286837 - 23286967
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcat-aaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    ||||||||||||||||||||||||||||  |||| |||||| |||||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  23286837 tataaaatgatattttctaaaatatatatttcaataaacacttatttctttcataaaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccgg 23286935  T
Q  181 aacaccgtaatttacgggtgtaccatagaagt 212  Q
     ||||| |||||| |||||||||| |||||||    
T  23286936 tacaccttaatttgcgggtgtaccgtagaagt 23286967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 23275078 - 23275158
Alignment:
Q  98 ctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtacc 178  Q
    |||||||  ||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23275078 ctaaaatgcatatgtcaaaaaacacctattttcttcataaaaaataatagttaatttataaaaattgtaagcgagagtacc 23275158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 113 - 222
Target Start/End: Complemental strand, 39171103 - 39170992
Alignment:
Q  113 caacaaacacctattttcttcataaaaaatgatagt---taatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccataga 209  Q
    ||||||||||||||||  ||||||||||||||||||   |||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||| ||||    
T  39171103 caacaaacacctatttctttcataaaaaatgatagtagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttgcgggtgtaccgtaga 39171005  T
Q  210 agtcccctaatat 222  Q
    ||| |||| ||||    
T  39171004 agttcccttatat 39170992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 17642304 - 17642475
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||| ||||||||||||           ||| ||| |||||||||||||||||||||| |  |||||||| | || |||  ||||    
T  17642304 ttagtatgatttttataaacaatgaaatgatgtttttt-----ttcttatgaaatgatattttctaaaatataaatatcaacaaatagctttttatttca 17642398  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    | |||||||||||||||||||||||  ||  |||  |||||||||| ||||| |||||| |||||||||| |||||||    
T  17642399 t-aaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 17642475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 2273241 - 2273411
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    ||||||||||||||||||| ||||||||||||           ||| |||||||||||||||||||||||| | |  |||||||| | || |||  ||||    
T  2273241 ttagtatgatttttataaacaatgaaatgatgttttt------ttcttataaaatgatattttctaaaatacaaatatcaacaaatagctttttatttca 2273334  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagt 212  Q
    | |||||||| ||||||||||||||  ||  |||  |||||||||| ||||| |||||| | |||||||| |||||||    
T  2273335 t-aaaaatgacagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcaggtgtaccgtagaagt 2273411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 43049808 - 43049882
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttata 157  Q
    |||||||||||||||||||||||||| |  |||||||| | || |||  ||||| |||||| ||||||||||||||    
T  43049808 tataaaatgatattttctaaaatataaatatcaacaaatagctctttatttcat-aaaaataatagttaatttata 43049882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 35 - 217
Target Start/End: Original strand, 48242 - 48416
Alignment:
Q  35 ttagtatgatttttataaaaaatgaaatgatgnnnnnnnnnncttcatataaaatgatattttctaaaatatataggtcaacaaacacctattttcttca 134  Q
    |||||||||||||| |||||||||||||||||           ||| |||||||||||||||||||||||||||| ||||||||||||||||||  ||||    
T  48242 ttagtatgatttttctaaaaaatgaaatgatgtttt-------ttcttataaaatgatattttctaaaatatatatgtcaacaaacacctatttctttca 48334  T
Q  135 taaaaaatgatagttaatttataaaaattgtaagcgagagtaccggaacaccgtaatttacgggtgtaccatagaagtcccct 217  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||| || |||||||||| ||||||| ||||    
T  48335 taaaaaatgatagttaatttataaaaa-tgtaagcgagagtaccggtacaccttaaattgcgggtgtaccgtagaagttccct 48416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 82 - 180
Target Start/End: Complemental strand, 36743 - 36644
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttctt-cataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 180  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36743 tataaaatgatattttctaaaatatatatgtcaacaaacaccaattttctttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgg 36644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 82 - 218
Target Start/End: Original strand, 6511 - 6646
Alignment:
Q  82 tataaaatgatattttctaaaatatataggtcaacaaacacctattttcttcataaaaaatgatagttaatttataaaaattgtaagcgagagtaccgga 181  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||   ||||||  |||| ||  | ||||||||||| ||||| ||||||||||||     
T  6511 tataaaatgatattttgtaaaatatatatgtcaacaaacacctatttctgtcataaggaatggtaagtgatttataaaaa-tgtaaccgagagtaccggt 6609  T
Q  182 acaccgtaatttacgggtgtaccatagaagtccccta 218  Q
    ||||| ||| || |||||||||| ||||||| |||||    
T  6610 acaccttaaattgcgggtgtaccgtagaagttcccta 6646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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