View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7609_high_25 (Length: 241)
Name: NF7609_high_25
Description: NF7609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7609_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 38699672 - 38699894
Alignment:
| Q |
1 |
catcttcttctcctttctgttaataagagattgtgcatctacaattgtcttttccagcaaagacttgctgaaatgtaagatttatagataaataannnnn |
100 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
38699672 |
catcttcttctcctttgtgttaataagagattgtgcatctacaattgtcttttccagcaaagacttgctgaaatgtaagatttacagataaataatttta |
38699771 |
T |
|
| Q |
101 |
nnaaatagggtgtaacactttccattttattgtttagggaaagaaaaatacattcaaaaggtcaaatgtatataaacattaccaggtggagatctcgaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38699772 |
ttaaatagggtgtaacactttccattttattgtttagggaaagaaaaatacattcaaaaggtcaaatgtatataaacattaccaggtggagatctcgaat |
38699871 |
T |
|
| Q |
201 |
tgcttgttgttagaacatgggat |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
38699872 |
tgcttgttgttagaacatgggat |
38699894 |
T |
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