View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7609_low_19 (Length: 296)
Name: NF7609_low_19
Description: NF7609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7609_low_19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 19 - 296
Target Start/End: Original strand, 38699405 - 38699682
Alignment:
| Q |
19 |
tgttgagaaaaatatgtaatatatcgtagaatctgacacaaatttttctgatcaagaagatattctgcctgcaaaaataaccatgtcaagaaaaacgttt |
118 |
Q |
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| T |
38699405 |
tgttgagaaaaatatgtaatatatcgtagaatctgacacaaatttttctgatcaagaagatattctgcctgcaaaaataaccatgtcaagaaaaacgttt |
38699504 |
T |
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| Q |
119 |
caaaataagaaatgcccaaagacttccattctatctctatctcctaagacattggtttaaaattcttaaatataaagagatgcaagagtagatgggtata |
218 |
Q |
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| T |
38699505 |
caaaataagaaatgcccaaagacttccattctatctctatctcctaagacattggtttaaaattcttaaatataaagagatgcaagagtagatgggtata |
38699604 |
T |
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| Q |
219 |
ccacagtgtaagcttcaattttttcccgatacacgagtagctgaaaaatgctctttcgcataccatccatcttcttct |
296 |
Q |
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| T |
38699605 |
ccacagtgtaagcttcaattttataccgatacacgagtagctgaaaaatgctatctcgcatatcatccatcttcttct |
38699682 |
T |
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