View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7609_low_8 (Length: 466)

Name: NF7609_low_8
Description: NF7609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7609_low_8
NF7609_low_8
[»] chr2 (20 HSPs)
chr2 (128-446)||(41846150-41846468)
chr2 (128-202)||(16366965-16367039)
chr2 (128-202)||(20911132-20911206)
chr2 (131-210)||(9694053-9694132)
chr2 (128-202)||(1149939-1150013)
chr2 (144-202)||(1150068-1150126)
chr2 (144-202)||(16367158-16367216)
chr2 (128-202)||(20911437-20911511)
chr2 (129-202)||(17285044-17285117)
chr2 (159-216)||(17580664-17580720)
chr2 (128-201)||(19606920-19606993)
chr2 (159-202)||(22309433-22309476)
chr2 (144-207)||(45663698-45663761)
chr2 (144-202)||(8089583-8089641)
chr2 (128-202)||(10446834-10446908)
chr2 (144-202)||(22309755-22309813)
chr2 (144-202)||(32519286-32519344)
chr2 (144-202)||(41846587-41846645)
chr2 (150-207)||(43682183-43682241)
chr2 (129-202)||(32519157-32519230)
[»] chr4 (21 HSPs)
chr4 (128-210)||(50245851-50245933)
chr4 (128-202)||(20086439-20086513)
chr4 (128-202)||(50246166-50246240)
chr4 (128-201)||(48507725-48507798)
chr4 (144-204)||(48507545-48507605)
chr4 (128-202)||(8287241-8287315)
chr4 (144-202)||(35730856-35730914)
chr4 (144-202)||(37678043-37678101)
chr4 (128-211)||(53559695-53559778)
chr4 (144-202)||(8287063-8287121)
chr4 (144-202)||(22249928-22249986)
chr4 (131-201)||(35730972-35731042)
chr4 (144-202)||(37677850-37677908)
chr4 (144-202)||(47862283-47862341)
chr4 (128-201)||(12691713-12691786)
chr4 (129-202)||(13872071-13872144)
chr4 (144-201)||(13872265-13872322)
chr4 (129-202)||(54961433-54961506)
chr4 (159-204)||(54961770-54961815)
chr4 (129-197)||(20600954-20601022)
chr4 (146-202)||(27813181-27813237)
[»] chr7 (18 HSPs)
chr7 (238-303)||(19506966-19507031)
chr7 (129-202)||(25049470-25049543)
chr7 (144-204)||(20947324-20947384)
chr7 (128-202)||(26825632-26825706)
chr7 (144-202)||(27557979-27558037)
chr7 (128-202)||(43937896-43937970)
chr7 (128-201)||(20947196-20947269)
chr7 (144-201)||(27557851-27557908)
chr7 (129-215)||(37563663-37563749)
chr7 (144-202)||(43938089-43938147)
chr7 (159-202)||(27558191-27558234)
chr7 (144-202)||(12929449-12929507)
chr7 (144-202)||(19980081-19980139)
chr7 (128-202)||(34454486-34454560)
chr7 (144-202)||(34454675-34454733)
chr7 (159-217)||(44545582-44545640)
chr7 (144-202)||(47081849-47081907)
chr7 (128-192)||(12931046-12931110)
[»] chr6 (26 HSPs)
chr6 (128-216)||(13480516-13480604)
chr6 (128-202)||(16704617-16704691)
chr6 (128-202)||(23291746-23291820)
chr6 (128-215)||(738005-738092)
chr6 (159-202)||(3586406-3586449)
chr6 (159-202)||(21544520-21544563)
chr6 (128-190)||(3299867-3299929)
chr6 (128-202)||(15819798-15819872)
chr6 (128-202)||(16706959-16707033)
chr6 (144-198)||(31879782-31879836)
chr6 (144-201)||(19296423-19296480)
chr6 (144-208)||(5064331-5064395)
chr6 (128-207)||(30234900-30234979)
chr6 (128-202)||(13480210-13480284)
chr6 (144-202)||(20561122-20561180)
chr6 (128-202)||(20994999-20995073)
chr6 (144-202)||(21880559-21880617)
chr6 (128-178)||(22494188-22494238)
chr6 (144-202)||(23291875-23291933)
chr6 (128-202)||(23292052-23292126)
chr6 (128-202)||(26503662-26503736)
chr6 (129-202)||(3299561-3299634)
chr6 (144-201)||(20774092-20774149)
chr6 (144-192)||(737902-737950)
chr6 (131-207)||(31386796-31386872)
chr6 (129-201)||(32337567-32337639)
[»] chr5 (29 HSPs)
chr5 (128-207)||(14745445-14745524)
chr5 (128-210)||(7015502-7015584)
chr5 (144-217)||(31118942-31119015)
chr5 (128-213)||(33735621-33735706)
chr5 (159-202)||(9915433-9915476)
chr5 (128-215)||(25253394-25253481)
chr5 (128-215)||(25317185-25317272)
chr5 (128-211)||(32052217-32052300)
chr5 (129-208)||(37944990-37945069)
chr5 (131-201)||(8323059-8323129)
chr5 (131-202)||(21260867-21260938)
chr5 (147-205)||(12628260-12628318)
chr5 (152-202)||(18934852-18934902)
chr5 (144-202)||(22024065-22024123)
chr5 (144-202)||(25253217-25253275)
chr5 (128-202)||(32052532-32052606)
chr5 (144-201)||(16117964-16118021)
chr5 (128-205)||(20705020-20705099)
chr5 (159-202)||(16118146-16118189)
chr5 (144-202)||(12990919-12990977)
chr5 (144-202)||(13064540-13064598)
chr5 (128-202)||(22533392-22533466)
chr5 (144-202)||(22533585-22533643)
chr5 (144-202)||(33735508-33735566)
chr5 (128-178)||(41339380-41339430)
chr5 (128-201)||(6421625-6421698)
chr5 (144-200)||(6421819-6421875)
chr5 (128-192)||(14745621-14745685)
chr5 (144-204)||(41339547-41339607)
[»] scaffold0233 (2 HSPs)
scaffold0233 (128-205)||(8432-8509)
scaffold0233 (129-202)||(8741-8814)
[»] chr1 (36 HSPs)
chr1 (128-201)||(35311977-35312050)
chr1 (128-207)||(19755713-19755792)
chr1 (128-202)||(33347724-33347798)
chr1 (128-202)||(49003183-49003257)
chr1 (128-217)||(25414831-25414920)
chr1 (128-192)||(37152550-37152614)
chr1 (134-205)||(34176238-34176309)
chr1 (144-202)||(2953659-2953717)
chr1 (128-202)||(2953772-2953846)
chr1 (144-202)||(5183701-5183759)
chr1 (144-202)||(19755600-19755658)
chr1 (144-202)||(24701465-24701523)
chr1 (143-201)||(34176119-34176177)
chr1 (144-202)||(46849982-46850040)
chr1 (128-202)||(48380683-48380757)
chr1 (128-201)||(29980642-29980715)
chr1 (134-207)||(46364571-46364644)
chr1 (128-201)||(49002879-49002952)
chr1 (129-217)||(5926506-5926594)
chr1 (159-202)||(2953466-2953509)
chr1 (144-207)||(33030331-33030394)
chr1 (144-202)||(1047335-1047393)
chr1 (128-202)||(1047512-1047586)
chr1 (144-202)||(5926845-5926903)
chr1 (160-202)||(8890549-8890591)
chr1 (164-202)||(10019730-10019768)
chr1 (144-202)||(12577336-12577394)
chr1 (144-202)||(29042886-29042944)
chr1 (144-202)||(33347611-33347669)
chr1 (144-202)||(46364770-46364828)
chr1 (129-202)||(739221-739294)
chr1 (160-209)||(8890207-8890256)
chr1 (137-202)||(10019568-10019633)
chr1 (128-212)||(5183498-5183582)
chr1 (159-215)||(6056365-6056421)
chr1 (144-188)||(46849674-46849718)
[»] chr8 (31 HSPs)
chr8 (129-212)||(9632612-9632695)
chr8 (144-201)||(37713699-37713756)
chr8 (159-202)||(35163697-35163740)
chr8 (128-202)||(547743-547817)
chr8 (144-202)||(11478147-11478205)
chr8 (144-202)||(20096151-20096209)
chr8 (144-202)||(37342977-37343035)
chr8 (144-214)||(40422484-40422554)
chr8 (144-202)||(40525638-40525696)
chr8 (144-202)||(41182027-41182085)
chr8 (129-202)||(7702-7775)
chr8 (159-202)||(23424514-23424557)
chr8 (144-199)||(36623551-36623606)
chr8 (144-202)||(547630-547688)
chr8 (128-202)||(22763597-22763671)
chr8 (128-202)||(25287794-25287868)
chr8 (144-202)||(25287923-25287981)
chr8 (144-202)||(26740042-26740100)
chr8 (128-210)||(27857050-27857132)
chr8 (144-202)||(31690026-31690084)
chr8 (128-202)||(40525815-40525889)
chr8 (159-201)||(40933321-40933363)
chr8 (144-202)||(41251254-41251312)
chr8 (144-202)||(43866842-43866900)
chr8 (144-201)||(7396-7453)
chr8 (145-202)||(7588-7645)
chr8 (129-202)||(41251125-41251198)
chr8 (129-201)||(20096023-20096095)
chr8 (128-192)||(20096332-20096396)
chr8 (128-204)||(31690204-31690279)
chr8 (128-204)||(41801816-41801892)
[»] scaffold0279 (3 HSPs)
scaffold0279 (144-202)||(11052-11110)
scaffold0279 (144-201)||(11181-11238)
scaffold0279 (159-202)||(10855-10898)
[»] chr3 (20 HSPs)
chr3 (144-202)||(10749320-10749378)
chr3 (144-202)||(33458242-33458300)
chr3 (144-217)||(11312722-11312795)
chr3 (128-201)||(30890515-30890588)
chr3 (128-201)||(55036672-55036745)
chr3 (159-206)||(53037366-53037413)
chr3 (128-202)||(1741389-1741463)
chr3 (144-202)||(21300328-21300386)
chr3 (159-201)||(33458062-33458104)
chr3 (133-190)||(30890221-30890278)
chr3 (144-201)||(46670452-46670508)
chr3 (129-202)||(53037029-53037102)
chr3 (128-201)||(55036977-55037050)
chr3 (128-192)||(10749704-10749768)
chr3 (159-206)||(30803844-30803891)
chr3 (147-202)||(51279541-51279596)
chr3 (144-202)||(22129137-22129195)
chr3 (144-202)||(55036800-55036858)
chr3 (144-204)||(30890338-30890398)
chr3 (137-201)||(40256998-40257062)
[»] scaffold0202 (2 HSPs)
scaffold0202 (144-207)||(14558-14621)
scaffold0202 (129-201)||(14238-14310)
[»] scaffold0321 (2 HSPs)
scaffold0321 (128-202)||(10970-11044)
scaffold0321 (144-200)||(10793-10849)
[»] scaffold0206 (1 HSPs)
scaffold0206 (129-202)||(10327-10400)
[»] scaffold0022 (1 HSPs)
scaffold0022 (144-204)||(120330-120390)
[»] scaffold1493 (2 HSPs)
scaffold1493 (144-202)||(788-846)
scaffold1493 (128-202)||(901-975)
[»] scaffold0201 (1 HSPs)
scaffold0201 (144-201)||(14089-14146)


Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-143; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 128 - 446
Target Start/End: Complemental strand, 41846468 - 41846150
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttattttctagaatgct 227  Q
    |||| ||| |||||| ||||||| ||| || |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41846468 gattagaaggattactaacttcagggacgaaaattcaaatgacctatatttgtagggacgaaagatctatttaagcctattttttattttctagaatgct 41846369  T
Q  228 aacaagtgcgtttaagaagacaaaagaggtaaatttttataagaaattatgtaatcattatatttttaattgtctaaaagacatacattgtaaaagnnnn 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  41846368 aacaagtgcgtttaagaagacaaaagaggtaaatttttataagaaattatgtaatcattatatttttaattgtctaaaagacatacattgtaaaagaaaa 41846269  T
Q  328 nnncacacacttgaatctctttatttattataataacacacattagaatcttggatagcataaatatcataagcctagaaataaagaataacaataatca 427  Q
       |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41846268 acacacacatttgaatctcattatttattataataacacacattagaatcttggatagcataaatatcataagcctagaaataaagaataacaataatca 41846169  T
Q  428 gctatccttattggatgat 446  Q
    |||||||||||||||||||    
T  41846168 gctatccttattggatgat 41846150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 16367039 - 16366965
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||| ||||||||||||  ||||||||    
T  16367039 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaag 16366965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 20911206 - 20911132
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  |||||||||||| |||||||||    
T  20911206 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 20911132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 9694053 - 9694132
Alignment:
Q  131 tggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctatttt 210  Q
    ||||| |||||  ||||||| ||| || ||||||||||||||||||||  | |||||||||| ||||||||| |||||||    
T  9694053 tggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacctatttaagcctatttt 9694132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 1150013 - 1149939
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  |||||||||| | |||||||||    
T  1150013 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaatacctatttaag 1149939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 1150068 - 1150126
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || |||||||||||||||||||| |||||| |||||| |||||||||    
T  1150068 aacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaag 1150126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 16367216 - 16367158
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || |||||||||||||||||||| |||||| |||||| |||||||||    
T  16367216 aacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaag 16367158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 20911437 - 20911511
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| |||  | ||||||||||||||||||||| ||||||||||||  ||||||||    
T  20911437 gattggaatgattagtaacttcagggacaaaaattcaaatgacctatatttacagggacgaaagacatatttaag 20911511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 17285044 - 17285117
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||  |||||||  || || ||||||||||||||| ||||  ||||||||||||||||||||||    
T  17285044 attggaaggattagtaacttcattgacgaaaattcaaatgacctaaattttcagggacgaaagatctatttaag 17285117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 17580664 - 17580720
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttattt 216  Q
    |||||||||||||||||||| |||||||||||||  |||||||| || ||||||||||    
T  17580664 aattcaaatgacctatatttgtagggacgaaagacatatttaagcct-ttttttattt 17580720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 19606993 - 19606920
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    |||||||| |||||  ||||||| ||| || |||||||||||| |||||||| ||||||||||||  |||||||    
T  19606993 gattggaaggattagtaacttcagggacgaaaattcaaatgacatatatttacagggacgaaagacatatttaa 19606920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 22309476 - 22309433
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  22309476 aattcaaatgacctatatttgcagggacgaaagacctatttaag 22309433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 45663761 - 45663698
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctat 207  Q
    ||||||||| | || ||||||||||||||||||||  ||||||||||||  |||||||| ||||    
T  45663761 aacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcctat 45663698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 8089583 - 8089641
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||| || |||||||| |||||||||||  ||||| |||||| |||||||||    
T  8089583 aacttcaaggacgaaaattcaaacgacctatatttgcagggatgaaagacctatttaag 8089641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 10446908 - 10446834
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || |||||||||| |||||||||  ||||||||||||  ||||||||    
T  10446908 gattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaag 10446834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 22309755 - 22309813
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  22309755 aacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaag 22309813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 32519286 - 32519344
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  32519286 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 32519344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 41846645 - 41846587
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||||||||||  ||||||||    
T  41846645 aacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacttatttaag 41846587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 43682183 - 43682241
Alignment:
Q  150 aaggatgacaattcaaatgacctatatttatagggacgaaa-gatctatttaagtctat 207  Q
    |||||||| ||||||||||||||||||||  |||||||||| || ||||||||| ||||    
T  43682183 aaggatgaaaattcaaatgacctatatttggagggacgaaatgacctatttaagcctat 43682241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 32519230 - 32519157
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||  || |||| ||| || ||||||||||||||||||||  ||||||||||||  ||||||||    
T  32519230 attggaaggattagtaatttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 32519157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 5e-20; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 50245933 - 50245851
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctatttt 210  Q
    |||||||| |||||  ||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||  |||||||    
T  50245933 gattggaatgattagtaacttcatggatgaaaattcaaatgacctatatttacagggacgaaagatctatttaaacctatttt 50245851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 20086513 - 20086439
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || |||||||||||||||||||||||| |||||||||  ||||||||    
T  20086513 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttatagagacgaaagacatatttaag 20086439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 50246166 - 50246240
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  ||||| ||||||||||||||||    
T  50246166 gattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagatctatttaag 50246240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 48507725 - 48507798
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    |||||||| |||||  |||||||  || || |||||||||||||||||||| ||||||||||||| ||||||||    
T  48507725 gattggaaggattagtaacttcagagacgaaaattcaaatgacctatatttgtagggacgaaagacctatttaa 48507798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 48507545 - 48507605
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtc 204  Q
    ||||||| ||| || |||||||||||| |||||||  ||||||||||||||||||||||||    
T  48507545 aacttcagggacgaaaattcaaatgacttatatttgcagggacgaaagatctatttaagtc 48507605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 8287241 - 8287315
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || |||||||||| |||||||||  |||||||||||| |||||||||    
T  8287241 gattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaag 8287315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 35730914 - 35730856
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||| || ||||||||||||||||||||  | |||||||||| |||||||||    
T  35730914 aacttcaaggacgaaaattcaaatgacctatatttgcatggacgaaagaactatttaag 35730856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 37678101 - 37678043
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  |||||||||||| |||||||||    
T  37678101 aacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 37678043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 53559695 - 53559778
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttt 211  Q
    |||||||| |||||  ||||||| ||| || |||||||||| |||||||||  ||||||||||||  |||||||| || |||||    
T  53559695 gattggaacgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagccttttttt 53559778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 8287063 - 8287121
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||| |||||||| |||||||||    
T  8287063 aacttcagggacgaaaattcaaatgacctatatttgcaggaacgaaagacctatttaag 8287121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 22249986 - 22249928
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||| ||||||||||||||||||||  ||||| ||||||  ||||||||    
T  22249986 aacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacttatttaag 22249928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 35730972 - 35731042
Alignment:
Q  131 tggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||| |||||  ||||||| ||| || ||||||||||||||||||||  |||||||||||| ||| ||||    
T  35730972 tggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctacttaa 35731042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 37677908 - 37677850
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  37677908 aacttcagggacgaaaattcaaatgacctatatttgcagggaagaaagacctatttaag 37677850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 47862283 - 47862341
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  47862283 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 47862341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 12691713 - 12691786
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    |||||||| |||||  ||||||| |||  | ||||||||||||||||||||  ||||||||||||  |||||||    
T  12691713 gattggaaggattagtaacttcagggacaaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 12691786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 13872144 - 13872071
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||  ||||||| ||| || ||||||||| ||||||||||  ||||||||||||  ||||||||    
T  13872144 attggaaggattaataacttcatggacgaaaattcaaataacctatatttgcagggacgaaagacatatttaag 13872071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 13872322 - 13872265
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    |||||||||||| | |||||||||||| |||||||  ||||| |||||| ||||||||    
T  13872322 aacttcaaggataaaaattcaaatgacatatatttgcagggatgaaagacctatttaa 13872265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 54961506 - 54961433
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||  ||||||| ||| || ||||||||||  ||||||||  |||||||||||| |||||||||    
T  54961506 attggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaag 54961433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 54961770 - 54961815
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaagtc 204  Q
    ||||||||||||||||||||  ||||||||||||  ||||||||||    
T  54961770 aattcaaatgacctatatttgcagggacgaaagacatatttaagtc 54961815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 20601022 - 20600954
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctat 197  Q
    |||||||  |||| |||||||||  | || ||||||||||||||||||||  |||||||||||| ||||    
T  20601022 attggaagaattagcaacttcaaaaacgaaaattcaaatgacctatatttgaagggacgaaagacctat 20600954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 27813181 - 27813237
Alignment:
Q  146 cttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||| ||| || ||||||||||| ||||||||  |||||||||||| |||||||||    
T  27813181 cttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaag 27813237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 5e-17; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 19507031 - 19506966
Alignment:
Q  238 tttaagaagacaaaagaggtaaatttttataagaaattatgtaatcattatatttttaattgtcta 303  Q
    ||||||||||||||||||||||||||||||  |||| | ||||||||||||||||||||| |||||    
T  19507031 tttaagaagacaaaagaggtaaatttttatgggaaaatgtgtaatcattatatttttaatcgtcta 19506966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 25049470 - 25049543
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||||||||  ||||||| |||  | ||||||||||||||||||||| |||||||||||| |||||||||    
T  25049470 attggaaagattagtaacttcagggagaaaaattcaaatgacctatatttacagggacgaaagacctatttaag 25049543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 20947324 - 20947384
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtc 204  Q
    ||||||||||| || ||||||||||||||||||||  |||||||||| |||||||||||||    
T  20947324 aacttcaaggacgaaaattcaaatgacctatatttgaagggacgaaatatctatttaagtc 20947384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 26825706 - 26825632
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||| ||||||||||||  ||||||||    
T  26825706 gattggaatgattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaag 26825632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 27557979 - 27558037
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||| || ||||||||||||||||||||  |||||||||||| |||||||||    
T  27557979 aacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 27558037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 43937970 - 43937896
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| |||||| ||||||||||||||||||||| | ||||||||||  ||||||||    
T  43937970 gattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttacaaggacgaaagacatatttaag 43937896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 20947269 - 20947196
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  |||||||||||| ||||||||    
T  20947269 gattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgaagggacgaaagacctatttaa 20947196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 27557908 - 27557851
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||| || |||||    
T  27557908 aacttcaaggacgaaaattcaaatgacctatatttacagggacgaaagacctgtttaa 27557851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 37563663 - 37563749
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttatt 215  Q
    ||||||| |||||  ||||||| ||| || |||||||||| |||||||||| ||||||||||||  |||||||| ||  ||||||||    
T  37563663 attggaaggattagtaacttcagggacgaaaattcaaatggcctatatttacagggacgaaagacatatttaagccttgtttttatt 37563749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 43938147 - 43938089
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || |||||||||||||||||||| |||||| |||| |||||||||||    
T  43938147 aacttcagggacgaaaattcaaatgacctatatttgtagggatgaaatatctatttaag 43938089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 202
Target Start/End: Original strand, 27558191 - 27558234
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  27558191 aattcaaatgacctatatttgcagggacgaaagacctatttaag 27558234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 12929507 - 12929449
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  12929507 aacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 12929449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 19980081 - 19980139
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||| || ||||||||||| ||||||||  | |||||||||| |||||||||    
T  19980081 aacttcaaggacgaaaattcaaatgatctatatttggaaggacgaaagacctatttaag 19980139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 34454560 - 34454486
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  |||||||| || || ||||||||||||||||||||  ||||||||| ||  ||||||||    
T  34454560 gattggaaggattagtaacttcaaagacgaaaattcaaatgacctatatttgcagggacgaaggacatatttaag 34454486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 34454733 - 34454675
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  34454733 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 34454675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 44545640 - 44545582
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttatttt 217  Q
    ||||||||||||||||||||  || ||| ||||| |||||||||||||| |||| ||||    
T  44545640 aattcaaatgacctatatttgcagagacaaaagacctatttaagtctatgttttttttt 44545582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 47081907 - 47081849
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||  ||||| |||||||||||| |||||||  |||||||||||| |||||||||    
T  47081907 aacttcagagatgaaaattcaaatgacatatatttgaagggacgaaagacctatttaag 47081849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 12931046 - 12931110
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaaga 192  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||| ||||||  ||||||||||||    
T  12931046 gattggaaggattagtaacttcagggacgaaaattcaaatgaccaatatttgcagggacgaaaga 12931110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 13480516 - 13480604
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttattt 216  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||| | ||||||||||  |||||||| |||||||||||||    
T  13480516 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacatatttaagcctattttttattt 13480604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 16704617 - 16704691
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||||||| || |||||||||| |||||||||  |||||||||||| |||||||||    
T  16704617 gattggaaggattagtaacttcaaggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaag 16704691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 23291820 - 23291746
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| |||||| |||||||||| ||||||||| |||||||||||||  ||||||||    
T  23291820 gattggaaggattagtaacttcagggatgaaaattcaaatggcctatatttgtagggacgaaagacatatttaag 23291746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 738005 - 738092
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttatt 215  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  ||||||||||||  |||||||| | || |||||||    
T  738005 gattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagccaatgttttatt 738092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 3586449 - 3586406
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||||||||||||||| ||||||||||||| |||||||||    
T  3586449 aattcaaatgacctatatttgtagggacgaaagacctatttaag 3586406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 21544563 - 21544520
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||||||||||||  ||||||||||||||||||||||    
T  21544563 aattcaaatgacctatatttgcagggacgaaagatctatttaag 21544520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 190
Target Start/End: Original strand, 3299867 - 3299929
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaa 190  Q
    |||||||| |||||  ||||||||||| || ||||||||||||||||||||  ||||||||||    
T  3299867 gattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaa 3299929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 15819798 - 15819872
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  ||||||||||||  ||||||||    
T  15819798 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 15819872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 16706959 - 16707033
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||||||| || ||||||||||||||||||||  |||||| ||||| ||| |||||    
T  16706959 gattggaatgattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggaccaaagacctaattaag 16707033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 31879782 - 31879836
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatt 198  Q
    ||||||| |||||  |||||||||||||||||||| ||||||||||||| |||||    
T  31879782 aacttcagggatgcaaattcaaatgacctatatttgtagggacgaaagacctatt 31879836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 19296480 - 19296423
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||| |||||| ||||||||||||||||||||  |||||||| ||| ||||||||    
T  19296480 aacttcatggatgaaaattcaaatgacctatatttgcagggacgatagacctatttaa 19296423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 5064395 - 5064331
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctatt 208  Q
    ||||||| ||| || |||||||||||| |||||||| ||||||||||||  |||||||| |||||    
T  5064395 aacttcagggacgaaaattcaaatgacttatatttacagggacgaaagacatatttaagcctatt 5064331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 30234900 - 30234979
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctat 207  Q
    |||||||| |||||  ||||||| |||||| ||||||||  ||||||||||  ||||||||||||  |||||||| ||||    
T  30234900 gattggaaggattagtaacttcagggatgaaaattcaaacaacctatatttgcagggacgaaagacatatttaagcctat 30234979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 13480284 - 13480210
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || |||||||||| |||||||||  ||||||||||||  ||||||||    
T  13480284 gattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaag 13480210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 20561180 - 20561122
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||| || ||||||||||||||||||||  ||||| ||||||  ||||||||    
T  20561180 aacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagacatatttaag 20561122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 20994999 - 20995073
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| |||||| |||||||||||| | |||||  || ||||||||| |||||||||    
T  20994999 gattggaaggattagtaacttcagggatgaaaattcaaatgacttctatttgcagagacgaaagacctatttaag 20995073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 21880617 - 21880559
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || |||||||||||||||||||| |||||| |||||| || ||||||    
T  21880617 aacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctgtttaag 21880559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 22494188 - 22494238
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatattt 178  Q
    |||||||| |||||  ||||||||||| || ||||||||||||||||||||    
T  22494188 gattggaaggattagtaacttcaaggacgaaaattcaaatgacctatattt 22494238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 23291875 - 23291933
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  23291875 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 23291933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 23292052 - 23292126
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  | ||||||||||  ||||||||    
T  23292052 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacatatttaag 23292126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 26503662 - 26503736
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || |||||||||||| |||||||  |||||||||| | |||||||||    
T  26503662 gattggaaggattaataacttcatggacgaaaattcaaatgacttatatttgcagggacgaaaaacctatttaag 26503736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 3299634 - 3299561
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||  ||||||| ||| || |||||||||||| |||||||  || ||||||||| |||||||||    
T  3299634 attggaatgattagtaacttcatggacgaaaattcaaatgacttatatttgcagagacgaaagacctatttaag 3299561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 20774149 - 20774092
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||||||| || |||||||||||| ||||||| || ||| |||||| ||||||||    
T  20774149 aacttcaaggacgaaaattcaaatgacatatatttgtaaggatgaaagacctatttaa 20774092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 737950 - 737902
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaaga 192  Q
    ||||||| | |||| ||||||||||||||||||||  ||||||||||||    
T  737950 aacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaaga 737902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 31386872 - 31386796
Alignment:
Q  131 tggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctat 207  Q
    ||||| ||||| |||||||||||| ||  ||||||||  |||||||||| ||||| |||| | ||||||||| ||||    
T  31386872 tggaaggattagcaacttcaaggacgaatattcaaatatcctatatttacagggatgaaacacctatttaagcctat 31386796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 32337639 - 32337567
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||| |||||  ||||||| ||| || ||||||||||  ||||||||  |||||||||||| ||||||||    
T  32337639 attggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaa 32337567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 7e-16; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 14745524 - 14745445
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctat 207  Q
    |||||||| |||||  ||||||| |||||| ||||||||||||||||||||  |||||||||||| ||||||||| ||||    
T  14745524 gattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcctat 14745445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 7015584 - 7015502
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctatttt 210  Q
    |||||||| |||||  ||||||| |||||| |||||||||| |||||||||  |||||||||||| ||||||||| |||||||    
T  7015584 gattggaatgattagtaacttcatggatgaaaattcaaatggcctatatttgcagggacgaaagacctatttaagcctatttt 7015502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 31119015 - 31118942
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttatttt 217  Q
    ||||||| |||||| |||||||||| |||||||||  |||||||||||||||||||||| || ||| |||||||    
T  31119015 aacttcagggatgaaaattcaaatggcctatatttgcagggacgaaagatctatttaagcctttttattatttt 31118942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 213
Target Start/End: Original strand, 33735621 - 33735706
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctatttttta 213  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  |||||||||||| ||||||||| || |||||||    
T  33735621 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcctttttttta 33735706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 9915476 - 9915433
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  9915476 aattcaaatgacctatatttatagggacgaaagacctatttaag 9915433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 25253394 - 25253481
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttatt 215  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  ||||||||||||  |||||||| |||||| |||||    
T  25253394 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcctatttgttatt 25253481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 215
Target Start/End: Original strand, 25317185 - 25317272
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttatt 215  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  ||||||||||||  |||||||| |||||| |||||    
T  25317185 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcctatttgttatt 25317272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 32052300 - 32052217
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttt 211  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||| |||||||||| |  |||||||| ||||||||    
T  32052300 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaaaacatatttaagcctattttt 32052217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 37945069 - 37944990
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctatt 208  Q
    ||||||| |||||  ||||||| ||| || ||||||||||||||||||||| | |||||||||| ||||||||| |||||    
T  37945069 attggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacctatttaagcctatt 37944990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 8323129 - 8323059
Alignment:
Q  131 tggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||| |||||  ||||||| ||| || ||||||||||||||||||||||||||| |||||| ||||||||    
T  8323129 tggaaggattagtaacttcatggacgaaaattcaaatgacctatatttatagggatgaaagacctatttaa 8323059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 21260938 - 21260867
Alignment:
Q  131 tggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||| |||||  ||||||| ||| || ||||||||||||||||||||  |||||||||||| |||||||||    
T  21260938 tggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagaactatttaag 21260867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 12628318 - 12628260
Alignment:
Q  147 ttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtct 205  Q
    |||||||| || ||||||||||||||||||||| | ||||||| || ||||||||||||    
T  12628318 ttcaaggacgaaaattcaaatgacctatatttacatggacgaaggacctatttaagtct 12628260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 18934852 - 18934902
Alignment:
Q  152 ggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||| ||||||||||||||||||||| |||||||||| | |||||||||    
T  18934852 ggatgaaaattcaaatgacctatatttacagggacgaaatacctatttaag 18934902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 22024123 - 22024065
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||| || ||||||||||||||||||||  |||||||||||| |||| ||||    
T  22024123 aacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatataag 22024065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 25253217 - 25253275
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  25253217 aacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 25253275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 32052532 - 32052606
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  ||||||||||||  ||||||||    
T  32052532 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 32052606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 16118021 - 16117964
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||| ||| || ||||||||||||||||||||| |||||| ||||| ||||||||    
T  16118021 aacttcagggacgaaaattcaaatgacctatatttacagggacaaaagacctatttaa 16117964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 20705020 - 20705099
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacc--tatatttatagggacgaaagatctatttaagtct 205  Q
    ||||| ||||||||  |||||||| || || |||||||||||||  |||||||| ||||||||||||  |||||||||||    
T  20705020 gattgaaaagattagtaacttcaaagacgaaaattcaaatgacctatatatttacagggacgaaagacatatttaagtct 20705099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 16118189 - 16118146
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  16118189 aattcaaatgacctatatttgcagggacgaaagacctatttaag 16118146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 12990919 - 12990977
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  12990919 aacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 12990977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 13064540 - 13064598
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  13064540 aacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 13064598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 22533466 - 22533392
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  | || ||||||| |||||||||    
T  22533466 gattggaatgattaataacttcagggacgaaaattcaaatgacctatatttgcaagggcgaaagacctatttaag 22533392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 22533643 - 22533585
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||| ||||  |||||||||||| |||||||||    
T  22533643 aacttcagggacgaaaattcaaatgacctaaatttgcagggacgaaagacctatttaag 22533585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 33735566 - 33735508
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  33735566 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 33735508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 41339430 - 41339380
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatattt 178  Q
    |||||||||||||| |||||||| ||| || |||||||||||| |||||||    
T  41339430 gattggaaagattagcaacttcagggacgaaaattcaaatgacttatattt 41339380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 6421698 - 6421625
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||| ||||||||  |||||||||||  | |||||||||||| |||||||  ||||||||||||  |||||||    
T  6421698 gattgaaaagattagtaacttcaaggacaaaaattcaaatgacatatatttgcagggacgaaagacatatttaa 6421625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 6421875 - 6421819
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctattta 200  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||    
T  6421875 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctattta 6421819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 14745621 - 14745685
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaaga 192  Q
    |||||||| |||||  |||||||  || || |||||||||| ||||||||| |||||||||||||    
T  14745621 gattggaaggattagtaacttcagcgacgaaaattcaaatggcctatatttgtagggacgaaaga 14745685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 41339607 - 41339547
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtc 204  Q
    ||||||| ||| || ||||||||||| ||||||||  ||||||||||||  ||||||||||    
T  41339607 aacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacatatttaagtc 41339547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 205
Target Start/End: Complemental strand, 8509 - 8432
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtct 205  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||| || ||||||||| ||||||||||||    
T  8509 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttaaagagacgaaagacctatttaagtct 8432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 8741 - 8814
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||  ||||||  |||||  ||||||||||||||||||||| |||||||||| | |||||||||    
T  8741 attggaaggattaataacttcgcggatggaaattcaaatgacctatatttacagggacgaaatacctatttaag 8814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 35312050 - 35311977
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    |||||||| |||||  |||||||  || || |||||||||||||||||||||||||||||||||| ||||||||    
T  35312050 gattggaatgattagtaacttcagtgacgaaaattcaaatgacctatatttatagggacgaaagacctatttaa 35311977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 19755713 - 19755792
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctat 207  Q
    |||||||| |||||  ||||||| |||| | ||||||||||||||||||||  |||||||||||| ||||||||| ||||    
T  19755713 gattggaaggattagtaacttcagggataaaaattcaaatgacctatatttgcagggacgaaagacctatttaagcctat 19755792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 33347724 - 33347798
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||||||| || ||||||||||||||||||||  |||||||||||| |||| ||||    
T  33347724 gattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatataag 33347798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 49003183 - 49003257
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  |||||||||||| |||||||||    
T  49003183 gattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 49003257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 25414920 - 25414831
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttatttt 217  Q
    |||||||| |||||  |||||||  || || |||||||||| ||||||||| |||||||||||||  |||||||| ||| ||||||||||    
T  25414920 gattggaaggattagtaacttcagagaagaaaattcaaatggcctatatttgtagggacgaaagacatatttaagcctaatttttatttt 25414831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 37152614 - 37152550
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaaga 192  Q
    |||||||| |||||  ||||||| ||| || |||||||||||||||||||| |||||||||||||    
T  37152614 gattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgtagggacgaaaga 37152550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 34176238 - 34176309
Alignment:
Q  134 aaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtct 205  Q
    ||||||||  ||||| | |||||| ||||||||| ||||||||||||| |||||||||  ||||||||||||    
T  34176238 aaagattagtaactttagggatgaaaattcaaattacctatatttatatggacgaaagccctatttaagtct 34176309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 2953717 - 2953659
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||| || |||||||||||| ||||||| |||||| |||||| |||||||||    
T  2953717 aacttcaaggacgaaaattcaaatgacttatatttgtagggatgaaagacctatttaag 2953659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 2953772 - 2953846
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  ||||||||||||  ||||||||    
T  2953772 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 2953846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 5183759 - 5183701
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || |||||||||||||||||||| |||||| |||||| |||||||||    
T  5183759 aacttcatggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaag 5183701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 19755658 - 19755600
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || |||||||||||||||||||| |||||| |||||| |||||||||    
T  19755658 aacttcagggacgaaaattcaaatgacctatatttgtagggatgaaagacctatttaag 19755600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 24701523 - 24701465
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  |||||||||||| |||||||||    
T  24701523 aacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagagctatttaag 24701465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 34176177 - 34176119
Alignment:
Q  143 caacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    |||||||||||| || |||||||||||| |||||||  |||||||||||| ||||||||    
T  34176177 caacttcaaggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaa 34176119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 46849982 - 46850040
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  |||||||||||| |||||||||    
T  46849982 aacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 46850040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 48380757 - 48380683
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  |||||||  || || ||||||||||||||||||||| | |||||||||| |||||||||    
T  48380757 gattggaaggattagtaacttcagcgacgaaaattcaaatgacctatatttacaaggacgaaagacctatttaag 48380683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 29980715 - 29980642
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||||||||||  ||||||| ||  || ||||||||||||||||||||| | ||||||||||  |||||||    
T  29980715 gattggaaagattagtaacttcatgggcgaaaattcaaatgacctatatttacaaggacgaaagacatatttaa 29980642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 46364644 - 46364571
Alignment:
Q  134 aaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctat 207  Q
    ||||||||  ||||||| ||| || ||||||||||||||||||||  ||||||||||||  |||||||| ||||    
T  46364644 aaagattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcctat 46364571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 49002952 - 49002879
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  ||||||||||||  |||||||    
T  49002952 gattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 49002879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 217
Target Start/End: Complemental strand, 5926594 - 5926506
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttatttt 217  Q
    ||||||| |||||  ||||||| ||| || ||||||||||||||||||||  ||||||||||||  ||||| ||| | |||||| ||||    
T  5926594 attggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttcagttttttttttttttt 5926506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 2953509 - 2953466
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||    
T  2953509 aattcaaatgacctatatttacagggacgaaagacatatttaag 2953466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 33030394 - 33030331
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctat 207  Q
    ||||||| ||| || ||||||||||||||||||||  |||||| ||||| ||||||||| ||||    
T  33030394 aacttcagggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaagcctat 33030331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 1047335 - 1047393
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || |||||||||||||||||||| |||||| |||| ||| |||||||    
T  1047335 aacttcagggacgaaaattcaaatgacctatatttgtagggatgaaatatccatttaag 1047393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 1047512 - 1047586
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  |||||||  || || ||||||||||||||||||||| ||||| ||||||  ||||||||    
T  1047512 gattggaaggattagtaacttcagagacgaaaattcaaatgacctatatttacagggatgaaagacatatttaag 1047586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 5926845 - 5926903
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||| ||||||||||  ||||||||  |||||||||||| |||||||||    
T  5926845 aacttcagggatgaaaattcaaatggtctatatttgcagggacgaaagacctatttaag 5926903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 8890549 - 8890591
Alignment:
Q  160 attcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||||||||||||||  |||||||||||| |||||||||    
T  8890549 attcaaatgacctatatttgcagggacgaaagacctatttaag 8890591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 202
Target Start/End: Original strand, 10019730 - 10019768
Alignment:
Q  164 aaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  10019730 aaatgacctatatttacagggacgaaagacctatttaag 10019768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 12577336 - 12577394
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||| || |||| ||||||| |||||||  |||||||||||| |||||||||    
T  12577336 aacttcaaggacgaaaatttaaatgacttatatttgcagggacgaaagacctatttaag 12577394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 29042886 - 29042944
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||| ||||||||||||||||||||  | ||| |||||| |||||||||    
T  29042886 aacttcagggatgaaaattcaaatgacctatatttgcaaggatgaaagacctatttaag 29042944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 33347669 - 33347611
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  33347669 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 33347611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 46364828 - 46364770
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  46364828 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 46364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 739294 - 739221
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||  ||||||||||| || ||||||||||  ||||||||  |||||||||| | |||||||||    
T  739294 attggaaggattagtaacttcaaggacgaaaattcaaatggtctatatttgcagggacgaaaaacctatttaag 739221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 8890256 - 8890207
Alignment:
Q  160 attcaaatgacctatatttatagggacgaaagatctatttaagtctattt 209  Q
    |||||||||||||||||||  |||||||||| | ||||||||| ||||||    
T  8890256 attcaaatgacctatatttgcagggacgaaatacctatttaagcctattt 8890207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 10019633 - 10019568
Alignment:
Q  137 gattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||| |||||||| ||| || |||||||||||| |||||||  |||||||||| | |||||||||    
T  10019633 gattagcaacttcagggacgaaaattcaaatgacttatatttgcagggacgaaatacctatttaag 10019568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 5183582 - 5183498
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctatttttt 212  Q
    |||||||| |||||  ||||| | ||| || ||||||||||||||||||||  ||| ||||||||  ||||||||  ||||||||    
T  5183582 gattggaaggattagtaactttatggacgaaaattcaaatgacctatattttcaggaacgaaagacatatttaagcttatttttt 5183498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 6056421 - 6056365
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttatt 215  Q
    ||||||||||||||||||||  ||||||||||||  |||||||| ||  ||||||||    
T  6056421 aattcaaatgacctatatttgcagggacgaaagacatatttaagccttatttttatt 6056365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 46849718 - 46849674
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacga 188  Q
    ||||||| ||| || ||||||||||||||||||||| ||||||||    
T  46849718 aacttcagggacgaaaattcaaatgacctatatttacagggacga 46849674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 9632612 - 9632695
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctatttttt 212  Q
    ||||||| |||||  ||||||||||| || ||||||||||||||||||||  |||||| ||||| ||||||||| || ||||||    
T  9632612 attggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacaaaagacctatttaagcctttttttt 9632695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 37713756 - 37713699
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||| ||| || |||||||||||| ||||||||||||||||||||| ||||||||    
T  37713756 aacttcatggacgaaaattcaaatgacttatatttatagggacgaaagacctatttaa 37713699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 35163740 - 35163697
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||||||||||||||||||||||||||  ||||||||    
T  35163740 aattcaaatgacctatatttatagggacgaaagacttatttaag 35163697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 547743 - 547817
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||| | ||| || ||||||||||| ||||||||  ||||||||||||||||||||||    
T  547743 gattggaaggattagtaactttagggacgaaaattcaaatgatctatatttgcagggacgaaagatctatttaag 547817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 11478205 - 11478147
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||| || ||||||||||||||||||||  |||||||||| | |||||||||    
T  11478205 aacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaag 11478147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 20096151 - 20096209
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || |||||||||||||||||||| |||||| |||||| |||||||||    
T  20096151 aacttcagggaagaaaattcaaatgacctatatttgtagggatgaaagacctatttaag 20096209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 37343035 - 37342977
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||| ||||||||||||||||||||  ||||| |||||| |||||||||    
T  37343035 aacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 37342977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 40422484 - 40422554
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttat 214  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| ||||||||| ||||| |||||    
T  40422484 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaagcctattatttat 40422554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 40525638 - 40525696
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||| ||||| |||||| |||||||||    
T  40525638 aacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacctatttaag 40525696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 41182027 - 41182085
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  |||||||||||| |||||||||    
T  41182027 aacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 41182085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 7702 - 7775
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||  ||||||| ||| || |||||||||| |||||||||  |||||||||||| |||||||||    
T  7702 attggaaggattagtaacttcatggacgaaaattcaaatggcctatatttgcagggacgaaagacctatttaag 7775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 23424557 - 23424514
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||    
T  23424557 aattcaaatgacctatatttacagggatgaaagacctatttaag 23424514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 36623606 - 36623551
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctattt 199  Q
    ||||||| |||||| ||||||||||||||||||||  ||||| |||||| ||||||    
T  36623606 aacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctattt 36623551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 547688 - 547630
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||| || ||||||||||||||||| ||  ||||| |||||| |||||||||    
T  547688 aacttcaaggacgaaaattcaaatgacctataattgcagggatgaaagacctatttaag 547630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 22763671 - 22763597
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||| |||||||||  ||||||| ||| || ||||||||||||||||||||  | |||||||| | |||||||||    
T  22763671 gattagaaagattagtaacttcagggacgaaaattcaaatgacctatatttgcaaggacgaaatacctatttaag 22763597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 25287868 - 25287794
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || |||||||||| || ||||||| ||||||||||||  ||||||||    
T  25287868 gattggaaggattagtaacttcagggacgaaaattcaaatggccaatatttacagggacgaaagacatatttaag 25287794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 25287923 - 25287981
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  25287923 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 25287981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 26740042 - 26740100
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||||||||||  ||||||||    
T  26740042 aacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 26740100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 27857050 - 27857132
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctatttt 210  Q
    |||||||| |||||  ||||||| ||| || |||||||||| |||||||||  ||||||||||||  |||||||  |||||||    
T  27857050 gattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaaacctatttt 27857132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 31690026 - 31690084
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  |||||||||| | |||||||||    
T  31690026 aacttcagggacgaaaattcaaatgacctatattttcagggacgaaaaacctatttaag 31690084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 40525815 - 40525889
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  || |||| ||| || ||||||||| ||||||||||| ||||||| ||||| ||||||||    
T  40525815 gattggaatgattagtaatttcagggacgaaaattcaaataacctatatttacagggacggaagatatatttaag 40525889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 40933321 - 40933363
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||||||||||||||||| || ||||||||| ||||||||    
T  40933321 aattcaaatgacctatatttacagagacgaaagacctatttaa 40933363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 41251254 - 41251312
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  41251254 aacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 41251312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 43866842 - 43866900
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||| ||||||||||||||||||||  ||||| ||||||  ||||||||    
T  43866842 aacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacttatttaag 43866900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 7453 - 7396
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||| ||| || ||||||||||||||||||||  ||||||||||||  |||||||    
T  7453 aacttcagggaagaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 7396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 7645 - 7588
Alignment:
Q  145 acttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||| ||| || ||||||||||||||||||||| ||||| |||||  |||||||||    
T  7645 acttcagggacgaaaattcaaatgacctatatttacagggatgaaaggcctatttaag 7588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 41251198 - 41251125
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||  |||||||  || || ||||||| ||||||||||||  |||||||||||| |||||||||    
T  41251198 attggaaggattagtaacttcagagacgaaaattcaattgacctatatttgcagggacgaaagacctatttaag 41251125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 20096095 - 20096023
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||| |||||  ||||||| |||  | |||||||||||| |||||||  |||||||||||| ||||||||    
T  20096095 attggaaggattagtaacttcagggacaaaaattcaaatgacatatatttgcagggacgaaagacctatttaa 20096023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 20096332 - 20096396
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaaga 192  Q
    |||||||| |||||  ||||||| ||| || |||||||||| |||||||||  ||||||||||||    
T  20096332 gattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaaga 20096396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 31690204 - 31690279
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtc 204  Q
    |||||||| |||||  ||||||| ||| || ||||||| ||||||||||||| |||||||||| |  ||||||||||    
T  31690204 gattggaatgattagtaacttcagggacgaaaattcaa-tgacctatatttacagggacgaaatacatatttaagtc 31690279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 41801892 - 41801816
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtc 204  Q
    |||||||| |||||  ||||||| | | || ||||||||||||||||||||  |||||||||| |  ||||||||||    
T  41801892 gattggaaggattagtaacttcaggaacgaaaattcaaatgacctatatttgcagggacgaaaaacatatttaagtc 41801816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 3)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 11110 - 11052
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||| || ||||||||||||||||||||  |||||||||||| |||||||||    
T  11110 aacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaag 11052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 11181 - 11238
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||| || |||||    
T  11181 aacttcaaggacgaaaattcaaatgacctatatttacagggacgaaagacctgtttaa 11238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 202
Target Start/End: Complemental strand, 10898 - 10855
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  10898 aattcaaatgacctatatttgcagggacgaaagacctatttaag 10855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 10749378 - 10749320
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||| |||||||||||| |||||||||    
T  10749378 aacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacctatttaag 10749320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 33458242 - 33458300
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| |||||||||||||||||||||||  |||||||||||| |||||||||    
T  33458242 aacttcagggacgacaattcaaatgacctatatttgcagggacgaaagacctatttaag 33458300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 11312795 - 11312722
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctattttttatttt 217  Q
    ||||||| ||| || ||||||||||||||||||||| ||||||||||||  |||||||| || |||||| ||||    
T  11312795 aacttcagggacgaaaattcaaatgacctatatttagagggacgaaagacatatttaagccttttttttttttt 11312722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 30890515 - 30890588
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||| ||||||||  ||||||| |||||| ||||||||||||||||||||| ||  |||||||| ||||||||    
T  30890515 gattgaaaagattagtaacttcagggatgaaaattcaaatgacctatatttacagaaacgaaagacctatttaa 30890588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 55036745 - 55036672
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    |||||||| |||||  ||||||| | |||| ||||||||||||||||||||  |||||||||||| ||||||||    
T  55036745 gattggaaggattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaagacctatttaa 55036672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 53037366 - 53037413
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaagtcta 206  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||    
T  53037366 aattcaaatgacctatatttacagagacgaaagatatatttaagtcta 53037413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 1741463 - 1741389
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || ||||||||||||||||||||  ||||||||||||  ||||||||    
T  1741463 gattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 1741389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 21300386 - 21300328
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||| ||||||||||||||||||||  ||||| |||||| |||||||||    
T  21300386 aacttcagggatgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 21300328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 33458062 - 33458104
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    |||||||||||||||||||| ||||||||||||| ||||||||    
T  33458062 aattcaaatgacctatatttgtagggacgaaagacctatttaa 33458104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 30890278 - 30890221
Alignment:
Q  133 gaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaa 190  Q
    |||||||||  |||||||  ||||| ||||||||||| ||||||||||||||||||||    
T  30890278 gaaagattagtaacttcagagatgaaaattcaaatgatctatatttatagggacgaaa 30890221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 46670508 - 46670452
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||| |||||| |||||||||||| |||||||  |||||||||||||||||||||    
T  46670508 aacttcagggatgaaaattcaaatgacatatattt-gagggacgaaagatctatttaa 46670452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 53037102 - 53037029
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||  ||||||| ||| || ||||||||||||||||||||| ||||| ||||||  ||||||||    
T  53037102 attggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacttatttaag 53037029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 55036977 - 55037050
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    |||||||| |||||  ||||||||| | || ||||||||||||||||||||  ||||||||||||  |||||||    
T  55036977 gattggaaggattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 55037050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 10749704 - 10749768
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaaga 192  Q
    ||||||||||||||  ||||||| ||| || |||| |||||||||||||||  ||||||||||||    
T  10749704 gattggaaagattagtaacttcagggacgaaaatttaaatgacctatatttgcagggacgaaaga 10749768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 30803891 - 30803844
Alignment:
Q  159 aattcaaatgacctatatttatagggacgaaagatctatttaagtcta 206  Q
    ||||||||||||||||| ||  |||||||||||| |||||||||||||    
T  30803891 aattcaaatgacctatagttgaagggacgaaagacctatttaagtcta 30803844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 51279541 - 51279596
Alignment:
Q  147 ttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| || ||||||||||||||||||||| | ||||| ||||| ||||||||    
T  51279541 ttcaaggacgaaaattcaaatgacctatatttacaaggacggaagatttatttaag 51279596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 22129137 - 22129195
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||| ||||| ||||||  ||||||||    
T  22129137 aacttcagggacgaaaattcaaatgacctatatttacagggatgaaagacttatttaag 22129195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 55036800 - 55036858
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  55036800 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 55036858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 30890338 - 30890398
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtc 204  Q
    ||||||| ||| || |||||||||||| |||||||   ||||||||| |||||||||||||    
T  30890338 aacttcagggacgaaaattcaaatgacttatatttgctgggacgaaatatctatttaagtc 30890398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 40256998 - 40257062
Alignment:
Q  137 gattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||| |||||||| | | || ||||||||||||||||||||  ||||| |||||| ||||||||    
T  40256998 gattagcaacttcaggaacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 40257062  T

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Target: scaffold0202 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 14558 - 14621
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtctat 207  Q
    ||||||||||| || ||||||||||||||||||||| ||||| ||| || ||||||||| ||||    
T  14558 aacttcaaggacgaaaattcaaatgacctatatttacagggaggaaggacctatttaagcctat 14621  T

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Target: scaffold0202; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 14310 - 14238
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||| |||||  ||| ||||||| || |||||||||||| |||||||  |||||||||||| ||||||||    
T  14310 attggaaggattagtaacctcaaggacgaaaattcaaatgacttatatttgcagggacgaaagacctatttaa 14238  T

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Target: scaffold0321 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 10970 - 11044
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||| ||||||||  ||||||| ||| || ||||||||||||||||||||  ||||||||||||  ||||||||    
T  10970 gattgaaaagattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 11044  T

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Target: scaffold0321; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 10793 - 10849
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctattta 200  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||    
T  10793 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctattta 10849  T

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Target: scaffold0206 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 10400 - 10327
Alignment:
Q  129 attggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| |||||  ||||||| ||| || ||||||||||| ||||||||  |||||||||||| |||||||||    
T  10400 attggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaag 10327  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 120330 - 120390
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaagtc 204  Q
    ||||||| ||| || ||||||||| || |||||||  ||||||||||||||||||||||||    
T  120330 aacttcatggacgaaaattcaaataacatatatttgcagggacgaaagatctatttaagtc 120390  T

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Target: scaffold1493 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 846 - 788
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| |||||||||    
T  846 aacttcagggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaag 788  T

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Target: scaffold1493; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 901 - 975
Alignment:
Q  128 gattggaaagattaccaacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaag 202  Q
    |||||||| |||||  ||||||| ||| || |||||||||| || ||||||| ||||||||||||  ||||||||    
T  901 gattggaaggattagtaacttcagggacgaaaattcaaatggccaatatttacagggacgaaagacatatttaag 975  T

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Target: scaffold0201 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 14146 - 14089
Alignment:
Q  144 aacttcaaggatgacaattcaaatgacctatatttatagggacgaaagatctatttaa 201  Q
    ||||||| ||| || ||||||||||||||||||||  ||||| |||||| ||||||||    
T  14146 aacttcatggacgaaaattcaaatgacctatatttgcagggatgaaagacctatttaa 14089  T

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