View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7615_high_7 (Length: 397)
Name: NF7615_high_7
Description: NF7615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7615_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 345; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 20 - 384
Target Start/End: Complemental strand, 41095256 - 41094892
Alignment:
| Q |
20 |
ggccaagtatatctagacagacacatgtataaataatcattcccttaatttttcatacacattataaagaagtatggcgtggtgaggaaatggaacaggc |
119 |
Q |
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| T |
41095256 |
ggccaagtatatctagacagacacatgtataaataatcattctctatatttttcatacacattataaagaagtatggcatggtgaggaaatggaacaggc |
41095157 |
T |
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| Q |
120 |
gaaaaagacatataattgcttaatagtttactattataccttttctttttctctgttggtctgtttgtttgtctcacaattgagttttcttttctcatag |
219 |
Q |
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| T |
41095156 |
gaaaaagacatataattgcttaatagtttactattataccttttctttttctctgttggtttgtttgtttgtctcacaattgagttttcttttctcatag |
41095057 |
T |
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| Q |
220 |
aaagcttccttaaaatcttcagcttcctttatgatctgatttctcatttccttttctctcttctccttttcctcaaggtgaatggcatttttcctgcata |
319 |
Q |
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| T |
41095056 |
aaagcttccttaaaatcttcagcttcctttatgatctgatttctcatttccttttctctcttctccttttcctcaaggtgaatggcatttttcctgcata |
41094957 |
T |
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| Q |
320 |
ggttgaagccataaaaattgtactatcatacaggcaaacaaaagcatgacagtattactttcttc |
384 |
Q |
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| T |
41094956 |
ggttgaagccataaaaattgtactatcatacaggcaaacaaaagcatgacagtattactttcttc |
41094892 |
T |
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