View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7615_low_12 (Length: 314)
Name: NF7615_low_12
Description: NF7615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7615_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 13 - 297
Target Start/End: Original strand, 40105060 - 40105350
Alignment:
| Q |
13 |
aaaataataaattataataaatgagatcaaattccaggacccactttgatgtaataattagcatcaaaatcaagataatctcacttcttaacacagtttc |
112 |
Q |
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| T |
40105060 |
aaaataataaattataataaatgagatcaaattccaggacccactttgatgtaataattagcatcaaaatcaagataatctcacttcttaacacagtttc |
40105159 |
T |
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| Q |
113 |
ttcatttctcttgctgactcatcactccaactgaaaatggcggaaaactccaactccaacggcaacagcgtccacgtggaacac------gaagaagaag |
206 |
Q |
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| T |
40105160 |
ttcatttctcttgctgactcatcactccaactgaaaatggcggaaaactccaactccaacggcaacagcgtccacgtggaacacgaggaagaagaagaag |
40105259 |
T |
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| Q |
207 |
aagaaacaaacaacttgaagcacagaaatactaaaccggtaaaacaaactttaccggaggtcctcaaccgtctcgcatccaccatcctttt |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40105260 |
aagaaacaaacaacttgaagcacagaaatactaaaccggtaaaacaaactttaccggaggtcctcaaccgtctcgcatccaccatcctttt |
40105350 |
T |
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