View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7617_high_24 (Length: 299)

Name: NF7617_high_24
Description: NF7617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7617_high_24
NF7617_high_24
[»] chr1 (16 HSPs)
chr1 (11-97)||(2497579-2497665)
chr1 (11-94)||(37814778-37814861)
chr1 (11-95)||(5489775-5489859)
chr1 (11-95)||(45639749-45639833)
chr1 (11-94)||(35003294-35003377)
chr1 (11-94)||(43571103-43571186)
chr1 (11-92)||(7447828-7447908)
chr1 (11-95)||(48498979-48499063)
chr1 (11-94)||(48119628-48119711)
chr1 (11-94)||(46168383-46168466)
chr1 (11-95)||(44112676-44112760)
chr1 (11-94)||(38335918-38336001)
chr1 (11-57)||(4401365-4401411)
chr1 (11-97)||(38113212-38113298)
chr1 (18-95)||(24769523-24769600)
chr1 (14-58)||(50448280-50448324)
[»] chr8 (22 HSPs)
chr8 (11-92)||(20148762-20148843)
chr8 (11-92)||(29800967-29801048)
chr8 (11-95)||(5754902-5754986)
chr8 (11-92)||(26125637-26125718)
chr8 (11-95)||(36743500-36743584)
chr8 (11-94)||(11582766-11582849)
chr8 (11-97)||(42197452-42197538)
chr8 (11-92)||(3743773-3743854)
chr8 (14-95)||(30660762-30660843)
chr8 (11-92)||(30912579-30912660)
chr8 (11-92)||(42699259-42699340)
chr8 (11-94)||(1375542-1375625)
chr8 (11-94)||(29705362-29705445)
chr8 (12-94)||(2165981-2166063)
chr8 (11-96)||(2546994-2547079)
chr8 (11-92)||(42295197-42295278)
chr8 (11-95)||(34304787-34304871)
chr8 (11-97)||(18066735-18066821)
chr8 (11-72)||(31384686-31384747)
chr8 (11-95)||(35181515-35181599)
chr8 (11-93)||(45397317-45397399)
chr8 (11-52)||(10678169-10678210)
[»] chr7 (24 HSPs)
chr7 (11-92)||(44326180-44326261)
chr7 (11-94)||(45326020-45326103)
chr7 (11-94)||(24001029-24001112)
chr7 (11-98)||(35069717-35069804)
chr7 (11-94)||(42538448-42538531)
chr7 (11-94)||(42972852-42972935)
chr7 (11-92)||(4638216-4638297)
chr7 (11-92)||(10573751-10573832)
chr7 (11-97)||(5194248-5194334)
chr7 (11-92)||(43343641-43343722)
chr7 (11-92)||(44416951-44417032)
chr7 (11-95)||(5015394-5015478)
chr7 (11-94)||(5810941-5811024)
chr7 (11-95)||(40236918-40237002)
chr7 (14-72)||(32029837-32029895)
chr7 (11-96)||(9216300-9216384)
chr7 (14-91)||(26898422-26898499)
chr7 (11-104)||(31513277-31513370)
chr7 (47-97)||(47279750-47279800)
chr7 (11-92)||(16180374-16180454)
chr7 (11-72)||(27393277-27393338)
chr7 (11-95)||(33384869-33384954)
chr7 (11-96)||(43317441-43317526)
chr7 (11-71)||(38160596-38160656)
[»] chr4 (29 HSPs)
chr4 (11-95)||(27864563-27864647)
chr4 (11-97)||(27893859-27893945)
chr4 (11-95)||(55966363-55966447)
chr4 (11-102)||(48463467-48463558)
chr4 (11-97)||(31680899-31680985)
chr4 (11-72)||(39631123-39631184)
chr4 (11-95)||(1771283-1771367)
chr4 (11-95)||(23035979-23036063)
chr4 (14-94)||(27550309-27550389)
chr4 (11-95)||(28982839-28982923)
chr4 (11-95)||(33703140-33703224)
chr4 (11-94)||(17619169-17619252)
chr4 (11-94)||(55272393-55272476)
chr4 (11-97)||(32728354-32728440)
chr4 (11-72)||(25051715-25051776)
chr4 (11-92)||(41327560-41327641)
chr4 (11-92)||(43514703-43514784)
chr4 (11-95)||(711959-712043)
chr4 (12-72)||(27316731-27316791)
chr4 (11-94)||(35017733-35017815)
chr4 (11-94)||(45490330-45490413)
chr4 (14-97)||(49229684-49229767)
chr4 (11-57)||(43949818-43949864)
chr4 (11-97)||(3756263-3756349)
chr4 (14-100)||(12496950-12497036)
chr4 (11-93)||(41878407-41878489)
chr4 (12-97)||(21687003-21687088)
chr4 (11-72)||(23204795-23204856)
chr4 (11-56)||(35037043-35037088)
[»] chr3 (23 HSPs)
chr3 (11-94)||(45126945-45127028)
chr3 (11-95)||(40808864-40808948)
chr3 (11-103)||(25996259-25996351)
chr3 (11-95)||(46941052-46941136)
chr3 (11-93)||(54237097-54237179)
chr3 (11-96)||(25413679-25413764)
chr3 (11-94)||(42100688-42100771)
chr3 (11-93)||(42394436-42394518)
chr3 (11-92)||(27748565-27748646)
chr3 (11-95)||(52627994-52628078)
chr3 (11-95)||(53273701-53273785)
chr3 (11-95)||(4190282-4190366)
chr3 (11-95)||(10457909-10457993)
chr3 (11-95)||(24688419-24688503)
chr3 (11-95)||(54246165-54246249)
chr3 (11-94)||(36150130-36150213)
chr3 (11-98)||(40480745-40480832)
chr3 (11-72)||(29558251-29558312)
chr3 (11-72)||(51249330-51249391)
chr3 (11-95)||(47191043-47191126)
chr3 (11-94)||(51757593-51757676)
chr3 (11-72)||(53581875-53581936)
chr3 (11-95)||(9434123-9434207)
[»] chr5 (11 HSPs)
chr5 (11-92)||(5256997-5257078)
chr5 (11-95)||(38470578-38470662)
chr5 (11-94)||(2614666-2614749)
chr5 (11-95)||(7617132-7617216)
chr5 (11-95)||(33801468-33801552)
chr5 (11-94)||(22512305-22512388)
chr5 (11-94)||(41334680-41334763)
chr5 (11-95)||(18033981-18034065)
chr5 (11-94)||(32473411-32473494)
chr5 (19-94)||(33855068-33855143)
chr5 (11-95)||(30622736-30622819)
[»] chr6 (16 HSPs)
chr6 (11-95)||(3213399-3213483)
chr6 (11-94)||(13743238-13743321)
chr6 (11-94)||(13748738-13748821)
chr6 (11-96)||(9698350-9698435)
chr6 (11-95)||(7367548-7367632)
chr6 (11-95)||(26670026-26670110)
chr6 (11-96)||(21293694-21293779)
chr6 (11-95)||(26466798-26466882)
chr6 (11-92)||(24204004-24204085)
chr6 (11-72)||(30736004-30736065)
chr6 (11-95)||(7292746-7292830)
chr6 (11-95)||(33242402-33242486)
chr6 (11-94)||(30014343-30014426)
chr6 (11-95)||(7273352-7273436)
chr6 (11-96)||(21279927-21280012)
chr6 (11-92)||(27441544-27441625)
[»] scaffold0385 (1 HSPs)
scaffold0385 (11-72)||(11273-11334)
[»] scaffold0119 (1 HSPs)
scaffold0119 (11-95)||(684-768)
[»] chr2 (16 HSPs)
chr2 (11-95)||(43335780-43335864)
chr2 (11-93)||(19047158-19047240)
chr2 (11-96)||(30838630-30838715)
chr2 (12-92)||(43490419-43490499)
chr2 (11-94)||(1750414-1750497)
chr2 (12-97)||(14285673-14285758)
chr2 (11-96)||(18491703-18491788)
chr2 (11-95)||(4764743-4764827)
chr2 (11-95)||(12302270-12302354)
chr2 (11-94)||(16096747-16096830)
chr2 (15-72)||(33229324-33229381)
chr2 (11-95)||(43114556-43114640)
chr2 (11-94)||(13780752-13780835)
chr2 (11-92)||(8896600-8896681)
chr2 (11-92)||(11825671-11825752)
chr2 (11-95)||(966851-966935)
[»] scaffold0038 (1 HSPs)
scaffold0038 (11-93)||(112656-112738)
[»] scaffold0187 (2 HSPs)
scaffold0187 (11-96)||(14205-14290)
scaffold0187 (11-96)||(24533-24618)
[»] scaffold0003 (1 HSPs)
scaffold0003 (11-92)||(45736-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (11-94)||(35473-35556)
[»] scaffold0157 (1 HSPs)
scaffold0157 (14-100)||(23441-23527)


Alignment Details
Target: chr1 (Bit Score: 67; Significance: 9e-30; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 2497579 - 2497665
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||||||| ||||    
T  2497579 gtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttttctaa 2497665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 37814861 - 37814778
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||| ||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||| | ||| |||||||||||||||    
T  37814861 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 37814778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 5489859 - 5489775
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||||| | |||  |||||||||||||||    
T  5489859 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcct 5489775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 45639749 - 45639833
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||| |||||||||| ||||   |||  |||||||||||||||    
T  45639749 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacattttcct 45639833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 35003377 - 35003294
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||| || ||||||| |||| | |||  ||||||||||||||    
T  35003377 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 43571103 - 43571186
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||| | |||| ||||||| | |||  ||||||||||||||    
T  43571103 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 7447908 - 7447828
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||||||| |||||||||  ||||| ||| |||||||||||||||||| ||||||| |||||  ||||||||||||    
T  7447908 gtgagatgaacttatcaaaatatctgtaatacatg-ggtgtacaatgggatgtaggaataaaggatgttcatgtaacatttt 7447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 48498979 - 48499063
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||  ||||  ||||||   |||  |||||||||||||||    
T  48498979 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcct 48499063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 48119711 - 48119628
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||| |||||||||||||||||||  ||| |||||||||| || ||||||| |||| | |||  ||||||||||||||    
T  48119711 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 48119628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 46168466 - 46168383
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||| |||||||||||||||||||  ||  |||||||||| |||| ||||| |||| | |||  ||||||||||||||    
T  46168466 gtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacattttcc 46168383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 44112760 - 44112676
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| |||||||||| ||| ||||  ||| |||||||||| || ||||||| |||| | |||  |||||||||||||||    
T  44112760 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 44112676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 38336001 - 38335918
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||| |||||||||||||||||||  ||| | ||||||||  | ||||||| |||| | |||  ||||||||||||||    
T  38336001 gtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 38335918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 4401411 - 4401365
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatg 57  Q
    ||||||||||||||||||||||||  ||||| ||| |||||||||||    
T  4401411 gtgagatgaacttaccaaaatatctctaatacatggggtgtacaatg 4401365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 38113212 - 38113298
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    |||||||||| |||||||||| || |||||  ||| |||||||||| || ||||||| |||| | |||  || ||||||||||||||    
T  38113212 gtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacattttcctaa 38113298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 24769523 - 24769600
Alignment:
Q  18 gaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||||||||||| ||||| ||| ||||||||||||  ||||  |||||| | |||  ||| |||||||||||    
T  24769523 gaacttaccaaaatatccctaatacatggggtgtacaatggagtgtagaaataaaaggtgttcatgaaacattttcct 24769600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 50448280 - 50448324
Alignment:
Q  14 agatgaacttaccaaaatatccttaatatatgaggtgtacaatgg 58  Q
    |||||||||||| ||||||||| ||||| || |||||||||||||    
T  50448280 agatgaacttacaaaaatatccctaatacataaggtgtacaatgg 50448324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 20148843 - 20148762
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  20148843 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 20148762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 29800967 - 29801048
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||    
T  29800967 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 29801048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 5754986 - 5754902
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||||||| ||||||| | |||  |||||||||||||||    
T  5754986 gtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttcct 5754902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 26125718 - 26125637
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||| ||||||||||||| | ||| |||||||||||||    
T  26125718 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

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Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 36743500 - 36743584
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||||| | |||  |||||||||||||||    
T  36743500 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcct 36743584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 11582849 - 11582766
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||||| | |||  ||||||||||||||    
T  11582849 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 42197452 - 42197538
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    ||||||||||||||||||||||||| ||||| ||   |||| ||||||| |||| ||||||||| |||  |||||||||||||||||    
T  42197452 gtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttcctaa 42197538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 3743854 - 3743773
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||||||| |||||||| ||||||||||| |||||| ||||||| | ||||||||| | ||| |||| ||||||||    
T  3743854 gtgagatgaacttatcaaaatatacttaatatatggggtgtataatgggagggatgaataaagggtgtatatggaacatttt 3743773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 30660762 - 30660843
Alignment:
Q  14 agatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||||||||||||||| ||||| ||  ||||||||||||||||||  |||||| | |||  |||||||||||||||    
T  30660762 agatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttcct 30660843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 30912579 - 30912660
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||||||||||||||| || ||||| |||| |||||||||||| |||| ||||||| | |||  ||||||||||||    
T  30912579 gtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 42699340 - 42699259
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    ||||||||||||||| ||||||||| ||||| || |||||||||||||| |||| ||||||| | |||  ||||||||||||    
T  42699340 gtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 1375625 - 1375542
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||| || |||||||||||||| ||||||||| |||||||||| || |||||||||||| | |||  |||||| |||||||    
T  1375625 gtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaattttcc 1375542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 29705445 - 29705362
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||||||| |||||||||| ||||| ||| ||||||||||||| ||||  |||||| | |||  ||||||||||||||    
T  29705445 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 29705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 2165981 - 2166063
Alignment:
Q  12 tgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||||||||||||||||  ||||| ||| ||| ||||||||| |||| ||||||||| |||  |||||| |||||||    
T  2165981 tgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatattttcc 2166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 2547079 - 2546994
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttccta 96  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||||  ||||  ||||||   |||  ||||||||||||||||    
T  2547079 gtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttccta 2546994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 42295278 - 42295197
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    ||||||||||||||||||||||||| ||||| |||  |||||||||| | |||| ||||||| | |||  ||||||||||||    
T  42295278 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 34304871 - 34304787
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| |||||||||| ||| ||||  ||| |||||||||| || ||||||| |||| |||||  |||||||||||||||    
T  34304871 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcct 34304787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 18066735 - 18066821
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    |||||||||| |||| ||||||||| ||||| ||| | |||||||| | |||||||| |||| | |||  |||||||||||||||||    
T  18066735 gtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttcctaa 18066821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 31384747 - 31384686
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    ||||||||||||||||||||||| | ||||| ||| |||||||||| | ||||| |||||||    
T  31384747 gtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaa 31384686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 35181599 - 35181515
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| |||||||||| ||| ||||  ||| |||||||||| || ||||||| |||| | |||  |||||||||||||||    
T  35181599 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 35181515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 45397399 - 45397317
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttc 93  Q
    ||||||||||||||| ||||||||| ||||| ||  |||||| |||||| |||| ||||||| | |||  | |||||||||||    
T  45397399 gtgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacattttc 45397317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 10678169 - 10678210
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgta 52  Q
    |||||||||| |||||||||| ||||||||||||| ||||||    
T  10678169 gtgagatgaatttaccaaaatgtccttaatatatggggtgta 10678210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 44326261 - 44326180
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||    
T  44326261 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 44326180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 45326103 - 45326020
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||| | ||| ||||||||| |||||    
T  45326103 gtgagatgaacttaccaaaatatccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaacactttcc 45326020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 24001029 - 24001112
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||||| | |||  ||||||||||||||    
T  24001029 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 35069804 - 35069717
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaag 98  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| | |||| |||||||   |||  ||||||||||||||||||    
T  35069804 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttcctaag 35069717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 42538448 - 42538531
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||||| | |||  ||||||||||||||    
T  42538448 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 42972935 - 42972852
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||  |||| ||||||| |||||  | ||||||||||||    
T  42972935 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttcc 42972852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 4638216 - 4638297
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||| |  |||||||||||| | |||  ||||||||||||    
T  4638216 gtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 10573832 - 10573751
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||| |||||||||||| | ||||| ||| |||||||||| ||||||||||||||| | ||| |||||||||||||    
T  10573832 gtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 5194248 - 5194334
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    |||||||||| ||| |||||||||||||| | ||  ||||||||||| | |||||||||||||| |||  |||||||||||||||||    
T  5194248 gtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcctaa 5194334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 43343641 - 43343722
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||||||| |||||||||| ||||| ||| |||||||||| || ||||  ||||||||||||  ||||||||||||    
T  43343641 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 44416951 - 44417032
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||||||| |||||||||| ||||| ||| |||||||||| || ||||  ||||||||||||  ||||||||||||    
T  44416951 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 5015478 - 5015394
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||  ||||  ||||||   |||  |||||||||||||||    
T  5015478 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcct 5015394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 5810941 - 5811024
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||||||| |||||||||| ||||||||  ||||||||||||| |||| ||||||| | ||   ||||||||||||||    
T  5810941 gtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 40237002 - 40236918
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| |||||||||| ||| ||||  ||| |||||||||| |||||||||| |||| | |||  |||||||||||||||    
T  40237002 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttcct 40236918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 32029837 - 32029895
Alignment:
Q  14 agatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    ||||||| |||||||||||||| ||||| ||| ||||||||||||| |||| |||||||    
T  32029837 agatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaa 32029895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 9216384 - 9216300
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttccta 96  Q
    ||||||||||||||||||||||||  ||||  ||| |||||||||| |||| || ||||||| | |||  ||||||||||||||||    
T  9216384 gtgagatgaacttaccaaaatatctctaatgcatg-ggtgtacaataggatataggaataaagggtgttcatgtaacattttccta 9216300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 26898422 - 26898499
Alignment:
Q  14 agatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattt 91  Q
    |||||||||||||||||||||| ||||| |||   |||||||| || |||||||||||| | |||  |||||||||||    
T  26898422 agatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 31513370 - 31513277
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaagttaaaa 104  Q
    |||||||||| |||||||||||||||||||  ||| ||| |||||| || ||||||| ||||   |||  |||||||||||||| || ||||||    
T  31513370 gtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttccaaacttaaaa 31513277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 47279750 - 47279800
Alignment:
Q  47 ggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    |||||||||||||||||||||||||| | | | ||||||| ||||||||||    
T  47279750 ggtgtacaatgggatgtatgaataaagggtatttatgtaatattttcctaa 47279800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 16180374 - 16180454
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||| ||||||||||||   |||||  || ||||||||||||| |||| ||||||||| |||  ||||||||||||    
T  16180374 gtgagatgaatttaccaaaatatttataatacgtggggtgtacaatggg-tgtaggaataaatggtgttgatgtaacatttt 16180454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 27393277 - 27393338
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    ||||||||||||||| ||||||||| ||||| ||   ||||||||| ||||||| |||||||    
T  27393277 gtgagatgaacttacaaaaatatccctaatacatagagtgtacaataggatgtaggaataaa 27393338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 33384954 - 33384869
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaat-gggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| |||||||||| ||| ||||  |||  || |||||| ||| ||||||| ||||||||||  |||||||||||||||    
T  33384954 gtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacattttcct 33384869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 43317526 - 43317441
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttccta 96  Q
    |||||||||| ||| |||||||||| |||   ||  | ||||||||| | |||||||||||||| |||  ||||||||||||||||    
T  43317526 gtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttccta 43317441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 38160596 - 38160656
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataa 71  Q
    |||||||||| |||| ||||||||| ||||| ||| ||||||||||||  |||| ||||||    
T  38160596 gtgagatgaagttactaaaatatccctaatacatggggtgtacaatggagtgtaagaataa 38160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 27864647 - 27864563
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  27864647 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttcct 27864563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 27893859 - 27893945
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    |||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  27893859 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttttctaa 27893945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 55966363 - 55966447
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||| | ||| ||||||||||||||||    
T  55966363 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttcct 55966447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 48463467 - 48463558
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaagttaa 102  Q
    ||||||||||||||||||||||||| ||||| ||| | |||||||||  ||||||||||||||| ||| |||||||||||||||||| ||||    
T  48463467 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttcctaatttaa 48463558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 31680985 - 31680899
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||| ||| || |||||||||| ||||    
T  31680985 gtgagatgaacttaccaaaatatccctaatatacggggtgtacaatggaatgtatgaataaatggtgtttacgtaacatttttctaa 31680899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 39631184 - 39631123
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| | |||| |||||||    
T  39631184 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaa 39631123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 1771283 - 1771367
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||||||| |||||||||  ||||| ||| ||||||||||||| |||| ||||||| | |||  |||||||||||||||    
T  1771283 gtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcct 1771367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 23036063 - 23035979
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||| ||||||||| ||||||||  |||||||||| || |||| ||||||| || ||  |||||||||||||||    
T  23036063 gtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttcct 23035979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 27550389 - 27550309
Alignment:
Q  14 agatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||  ||||  |||||| | |||  ||||||||||||||    
T  27550389 agatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 27550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 28982839 - 28982923
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| || ||||  |||||| | |||  |||||||||||||||    
T  28982839 gtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttcct 28982923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 33703224 - 33703140
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||||  |||||| | |||  |||||||||||||||    
T  33703224 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcct 33703140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 17619169 - 17619252
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||| |||||||||||||||||||  ||| |||||||||| || ||||||| |||| | |||  ||||||||||||||    
T  17619169 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 17619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 55272393 - 55272476
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||| |||||||||||||||||||  ||| |||||||||| |  ||||||| |||| |||||  ||||||||||||||    
T  55272393 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacattttcc 55272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 32728440 - 32728354
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    |||||||||| |||| ||||| ||||||||  ||| |||||||||| || ||||||| |||| |||||  |||||||||||||||||    
T  32728440 gtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcctaa 32728354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 25051776 - 25051715
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    ||||||||||||||||||||||||| ||||| ||  ||||||||||||| |||| |||||||    
T  25051776 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaa 25051715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 41327560 - 41327641
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||| |||||||||| ||| || |  || |||||||||||||| ||| |||||||| | |||||||||||||||||    
T  41327560 gtgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttt 41327641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 43514703 - 43514784
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||||||||||||||| || ||||| |||| |||||||||||  |||| ||||||| | |||  ||||||||||||    
T  43514703 gtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 712043 - 711959
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| |||||||||||||||||||  ||  |||||||||| || ||||||| |||| | |||  |||||||||||||||    
T  712043 gtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 711959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 27316731 - 27316791
Alignment:
Q  12 tgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    |||||||||||||||||||||||||||||| ||| |||||| |||| | |||| |||||||    
T  27316731 tgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaa 27316791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 35017815 - 35017733
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| | ||| ||| ||||||||||| ||| || ||||||| | |||  ||||||||||||||    
T  35017815 gtgagatgaacttaccaaaatatccct-atacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttcc 35017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 45490330 - 45490413
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||| |||| ||| ||||| ||||| |||||||||||||| |||||||| ||||||   |||  ||||||||||||||    
T  45490330 gtgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacattttcc 45490413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 49229684 - 49229767
Alignment:
Q  14 agatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    ||||||| |||||| ||||||||||||  |||| ||||||||| || ||||||| |||| |||||  || ||||||||||||||    
T  49229684 agatgaatttaccagaatatccttaatgcatgaagtgtacaatagggtgtatgattaaaggatgttcatataacattttcctaa 49229767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 43949818 - 43949864
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatg 57  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||    
T  43949818 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatg 43949864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 3756263 - 3756349
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    ||||||| || |||| ||||||||||||||  ||| |||||||||| || ||||||| |||| | |||  |||||||||||| ||||    
T  3756263 gtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttttctaa 3756349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 100
Target Start/End: Complemental strand, 12497036 - 12496950
Alignment:
Q  14 agatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaagtt 100  Q
    |||||||||||||||||||||  ||||| ||| | ||||||||||  |||| ||||||| | |||  || ||||||||||| |||||    
T  12497036 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttccaaagtt 12496950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 41878489 - 41878407
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttc 93  Q
    |||||||||||||| |||||||||| ||||  ||  ||||||||||| | ||||||||||||   |||  |||||||||||||    
T  41878489 gtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 21687088 - 21687003
Alignment:
Q  12 tgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    |||||||||||||| |||||||   ||||| || || |||| |||||| ||||  |||||| |||||  |||||||||||||||||    
T  21687088 tgagatgaacttactaaaatatttctaatacataagatgtataatggggtgtaaaaataaaggatgttcatgtaacattttcctaa 21687003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 23204795 - 23204856
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    |||| |||||||||| ||||||||| ||||| ||  | |||||||||||||||| |||||||    
T  23204795 gtgacatgaacttacaaaaatatccctaatacataggatgtacaatgggatgtaggaataaa 23204856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 35037088 - 35037043
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaat 56  Q
    |||||||||| |||||||||||||||||||  ||| ||||||||||    
T  35037088 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaat 35037043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 45126945 - 45127028
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| | ||| |||||||||||||||    
T  45126945 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 45127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 40808948 - 40808864
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||||| |||| ||||||||| |||  |||||||||||||||    
T  40808948 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcct 40808864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 103
Target Start/End: Complemental strand, 25996351 - 25996259
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaagttaaa 103  Q
    |||||||||| |||||||||| ||||||||||||| ||||||||||  ||||||||| |||| | |||  ||||||||||||||||| |||||    
T  25996351 gtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaacattttcctaaattaaa 25996259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 46941136 - 46941052
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||| |||||| ||||||| | |||  |||||||||||||||    
T  46941136 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttcct 46941052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 54237179 - 54237097
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttc 93  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||||| | |||  |||||||||||||    
T  54237179 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 25413764 - 25413679
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttccta 96  Q
    ||||||||||||||| ||||||||| ||||| || |||||||||||||| |||| ||||||| | |||  ||||||||||||||||    
T  25413764 gtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttccta 25413679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 42100771 - 42100688
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||| | |||| ||||||| | |||  ||||||||||||||    
T  42100771 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 42100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 42394436 - 42394518
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttc 93  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||| ||||| ||||||| | |||  |||||||||||||    
T  42394436 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 27748646 - 27748565
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    ||||||||||||||||||||||||| ||||| || ||||||| |||| | |||||||||||| | |||  ||||||||||||    
T  27748646 gtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 52627994 - 52628078
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| |||||||||||| ||||||  |||||||||||||| |||||||||| |||| | |||  | |||||||||||||    
T  52627994 gtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacattttcct 52628078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 53273701 - 53273785
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||| | ||||||||| | | || |||||||||||||  || ||||||||||||    
T  53273701 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacattttcct 53273785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 4190282 - 4190366
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| |||||||||||||  ||||| || ||||||||||| || ||||||| |||| | |||  |||||||||||||||    
T  4190282 gtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 4190366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 10457909 - 10457993
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||| || |||||||||||||||||||  ||| |||||||||| || ||||||| |||| | |||  |||||||||||||||    
T  10457909 gtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcct 10457993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 24688419 - 24688503
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||  ||||||||||||  ||||  |||||| | |||  |||||||||||||||    
T  24688419 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcct 24688503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 54246165 - 54246249
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||| ||||||||  ||||| ||  ||||||||||||| |||| ||||||| | |||  |||||||||||||||    
T  54246165 gtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcct 54246249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 36150213 - 36150130
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| | ||| ||  |||||| |||||| |||||||||||| | | |  ||||||||||||||    
T  36150213 gtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 40480832 - 40480745
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaag 98  Q
    ||||||||||||||||||||||||| ||||| ||  | |||||||||||   |||||||||| | |||  ||||||||||||| ||||    
T  40480832 gtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttcttaag 40480745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 29558251 - 29558312
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    |||||||||| ||||||| |||| | ||||||||  ||||||||||| ||||||||||||||    
T  29558251 gtgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaa 29558312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 51249391 - 51249330
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    |||||||||| |||||||||||||||||||  |||||||||| |||||| ||  ||||||||    
T  51249391 gtgagatgaatttaccaaaatatccttaatgcatgaggtgtataatgggttgggtgaataaa 51249330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 47191043 - 47191126
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||||||| |||||||||  ||||| ||| ||||||||||| | |||| ||||||| | |||  |||||||||||||||    
T  47191043 gtgagatgaacttatcaaaatatctctaatacatg-ggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 47191126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 51757676 - 51757593
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||| |||| ||||| ||| ||||  |||||||||||||| || ||||||| |||| | ||| ||||||| |||||||    
T  51757676 gtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaatattttcc 51757593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 53581875 - 53581936
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    |||||||||||||| |||||||||| ||||| ||  | ||||||||||  ||||||||||||    
T  53581875 gtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaa 53581936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 9434207 - 9434123
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| |||||||||| ||| ||||  ||| |||||||||| |  ||||||| |||| | |||  |||||||||||||||    
T  9434207 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcct 9434123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 5257078 - 5256997
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||    
T  5257078 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 5256997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 38470662 - 38470578
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||| ||||| |||||||||||||||||||| ||| |||||||||||| ||||||||||||| | ||| ||||||||||||||||    
T  38470662 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcct 38470578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 2614666 - 2614749
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||||| | |||  ||||||||||||||    
T  2614666 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 7617216 - 7617132
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||| |||||| |||||  |||||||||||| | |||  |||||||||||||||    
T  7617216 gtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttcct 7617132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 33801552 - 33801468
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||| ||||||||| ||||| |||  |||||||||||| ||||  |||||| |||||  |||||||||||||||    
T  33801552 gtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcct 33801468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 22512388 - 22512305
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||| |||  |||||||||||  |||| ||||||| | |||  ||||||||||||||    
T  22512388 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 41334680 - 41334763
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||| ||  |||||| |||| | |||||||||||| | |||  ||||||||||||||    
T  41334680 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttcc 41334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 18034065 - 18033981
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||| ||||||||| ||||| ||  ||||||||||||  |||| ||||||| | |||  |||||||||||||||    
T  18034065 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcct 18033981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 32473411 - 32473494
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||| |||||||||||||| ||||  ||| ||||||||||  | ||||||| |||| | |||  ||||||||||||||    
T  32473411 gtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 32473494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 33855068 - 33855143
Alignment:
Q  19 aacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||| | | ||||| ||| ||||||||||||| |||| ||||||| | |||  ||||||||||||||    
T  33855068 aacttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 33855143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 30622736 - 30622819
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||| || |||||||||||||||||||  ||| ||  |||||| || ||||||| |||| |||||  |||||||||||||||    
T  30622736 gtgagataaatttaccaaaatatccttaatgcatg-ggcttacaatagggtgtatgattaaaggatgttcatgtaacattttcct 30622819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 3213483 - 3213399
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||| ||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||| | ||| ||||||||||||||||    
T  3213483 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcct 3213399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 13743238 - 13743321
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||| | |||  ||||||||||||||    
T  13743238 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 13748738 - 13748821
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||| | |||  ||||||||||||||    
T  13748738 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13748821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 9698350 - 9698435
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttccta 96  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||||| | |||  ||||||||||||||||    
T  9698350 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttccta 9698435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 7367632 - 7367548
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||| | ||||||||| | ||||||||||||||||||  || ||||||||||||    
T  7367632 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttcct 7367548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 26670026 - 26670110
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| | |||| ||||||| | |||  |||||||||||||||    
T  26670026 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 26670110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 21293694 - 21293779
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttccta 96  Q
    |||| ||||| |||||||||||||||||||| ||| |||||||| ||  ||||||||||||| | ||| |||||||||||||||||    
T  21293694 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttccta 21293779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 26466882 - 26466798
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||||||||||||||| || ||||| |||  |||||||||||| |||| ||||||| | ||| ||||||||||||||||    
T  26466882 gtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcct 26466798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 24204004 - 24204085
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    ||||||||||||||||||||||||| ||||| |||  ||||||||| || |||| ||||||||| |||  ||||||||||||    
T  24204004 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 30736065 - 30736004
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    ||||||||||||||||||||||||  ||||| ||||||||||||||||| |||| |||||||    
T  30736065 gtgagatgaacttaccaaaatatcactaatacatgaggtgtacaatggggtgtaggaataaa 30736004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 7292830 - 7292746
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||  |||||| |||| | |||||||||||||| |||   ||||||||||||||    
T  7292830 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttcct 7292746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 33242486 - 33242402
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| |||||||||| ||||||||| ||| ||||||||||  | ||||||| |||||| |||  |||||||||||||||    
T  33242486 gtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttcct 33242402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 30014426 - 30014343
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||||||||||| | ||||| ||| | |||| ||||||||||| ||||||| | |||  ||||||||||||||    
T  30014426 gtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 7273352 - 7273436
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||  ||||| ||| ||||||||||  | |||| ||||||| | |||  |||||||||||||||    
T  7273352 gtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttcct 7273436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 21280012 - 21279927
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttccta 96  Q
    |||||||||| |||||||||||||| ||||| ||| | ||| |||||| |||||  |||||| | |||  ||||||||||||||||    
T  21280012 gtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttccta 21279927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 27441625 - 27441544
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||| |||||||||||||||||||| ||  | |||||||| || ||||||| |||| | |||  ||||||||||||    
T  27441625 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 11334 - 11273
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  11334 gtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaa 11273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 768 - 684
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| | |||| ||||||| | |||  |||||||||||||||    
T  768 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcct 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 43335780 - 43335864
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||||||||||||| ||||| ||| | ||||||||| | |||| |||||||||||||  || ||||||||||||    
T  43335780 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcct 43335864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 19047240 - 19047158
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttc 93  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||| ||||| ||||||| | |||  |||||||||||||    
T  19047240 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 30838715 - 30838630
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttccta 96  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||  ||||||  |||||| | |||  ||||||||||||||||    
T  30838715 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttccta 30838630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 43490419 - 43490499
Alignment:
Q  12 tgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||||||||||||||||| ||||| ||   ||||||||||||||||| ||||||| | |||  ||||||||||||    
T  43490419 tgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 43490499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 1750497 - 1750414
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||||||||||| ||||||||| ||||| ||  ||||||||||||| |||| ||||||| | |||  ||||||||||||||    
T  1750497 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 97
Target Start/End: Complemental strand, 14285758 - 14285673
Alignment:
Q  12 tgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaa 97  Q
    ||||||||| ||||||||||||| |||||||||  |||||||||| || ||||||| |||| | ||| | ||||| ||||||||||    
T  14285758 tgagatgaatttaccaaaatatctttaatatatagggtgtacaatagggtgtatgattaaagggtgtttgtgtaatattttcctaa 14285673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 18491788 - 18491703
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttccta 96  Q
    |||||||||| |||||||||| | ||||||  |||||||||||||| || ||||||| |||| | |||  ||||||||||||||||    
T  18491788 gtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttccta 18491703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 4764743 - 4764827
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| ||||||||||||   ||||| ||| |||||||||| || |||| ||||||||| |||  |||||||||||||||    
T  4764743 gtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacattttcct 4764827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 12302270 - 12302354
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    ||||||||||||||| ||||||||| ||||| ||  ||||||||||||| ||||  |||||| | |||  |||||||||||||||    
T  12302270 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcct 12302354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 16096830 - 16096747
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    ||||||| |||| |||||||||||| ||||| ||| |||||| |||||| |||| ||||||| | |||  ||||||||||||||    
T  16096830 gtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 33229381 - 33229324
Alignment:
Q  15 gatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaa 72  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||| | |||| |||||||    
T  33229381 gatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaa 33229324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 95
Target Start/End: Complemental strand, 43114640 - 43114556
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| |||||||||| ||| ||||  ||| |||||||||| || ||||||| |||| | |||  |||||||||||||||    
T  43114640 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 43114556  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 13780752 - 13780835
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||| ||| |||||||||| |||| |||| ||||||||||| | ||| ||||||||   |||  ||||||||||||||    
T  13780752 gtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacattttcc 13780835  T

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Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 8896600 - 8896681
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||| |||||||||||| | || | |||  |||||||||||| |||| |||||||| | |||  ||||||||||||    
T  8896600 gtgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtgaataaagggtgttcatgtaacatttt 8896681  T

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Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 11825671 - 11825752
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||| |||||||||| ||| ||||  ||| |||||||||| || ||||||| |||| | |||  ||||||||||||    
T  11825671 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 966851 - 966935
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcct 95  Q
    |||||||||| |||||||||  | ||||||  ||| |||||||||| || ||||||| |||| | |||  |||||||||||||||    
T  966851 gtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcct 966935  T

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Target: scaffold0038 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 112738 - 112656
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttc 93  Q
    ||||||||||||||||||||||||| ||||| ||  |||||||||||| ||||| ||||||| | |||  |||||||||||||    
T  112738 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

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Target: scaffold0187 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 14205 - 14290
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttccta 96  Q
    ||||||||||||||| ||||||||| ||||| ||  | ||||||||||| ||||  |||||| | |||  ||||||||||||||||    
T  14205 gtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttccta 14290  T

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Target: scaffold0187; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 24533 - 24618
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttccta 96  Q
    ||||||||||||||| ||||||||| ||||| ||  | ||||||||||| ||||  |||||| | |||  ||||||||||||||||    
T  24533 gtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttccta 24618  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 45736 - 45817
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacatttt 92  Q
    |||||||||| |||||||||||||||||||| ||  | |||||||| || ||||||| |||| | |||  ||||||||||||    
T  45736 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

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Target: scaffold0100 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 35473 - 35556
Alignment:
Q  11 gtgagatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcc 94  Q
    |||||||||| ||||||| || ||| ||||  ||| ||||||||||  | ||||||| |||||| ||| |||||||||||||||    
T  35473 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacattttcc 35556  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 23441 - 23527
Alignment:
Q  14 agatgaacttaccaaaatatccttaatatatgaggtgtacaatgggatgtatgaataaatgatgtctatgtaacattttcctaagtt 100  Q
    |||||||||||||||||||||  ||||| ||| | ||||||||||  |||| ||||||| | |||  || ||||||||||| |||||    
T  23441 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttccaaagtt 23527  T

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