View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7617_low_3 (Length: 643)

Name: NF7617_low_3
Description: NF7617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7617_low_3
NF7617_low_3
[»] chr2 (50 HSPs)
chr2 (57-624)||(2235141-2235708)
chr2 (26-104)||(33575421-33575497)
chr2 (24-108)||(44426250-44426334)
chr2 (8-108)||(2236055-2236153)
chr2 (26-107)||(19974689-19974770)
chr2 (25-108)||(22962616-22962699)
chr2 (25-109)||(39318186-39318269)
chr2 (25-108)||(31076760-31076843)
chr2 (26-109)||(44272922-44273004)
chr2 (25-107)||(31076120-31076202)
chr2 (25-107)||(34788824-34788905)
chr2 (25-107)||(44425626-44425707)
chr2 (24-109)||(22961771-22961856)
chr2 (25-82)||(44425710-44425767)
chr2 (25-109)||(38816071-38816153)
chr2 (28-107)||(19975329-19975407)
chr2 (25-82)||(22962556-22962613)
chr2 (25-82)||(31076205-31076262)
chr2 (25-82)||(32525789-32525846)
chr2 (25-82)||(34789226-34789283)
chr2 (25-82)||(36067144-36067201)
chr2 (24-87)||(19058041-19058104)
chr2 (25-112)||(32525849-32525935)
chr2 (25-107)||(36067664-36067746)
chr2 (25-107)||(2940060-2940142)
chr2 (25-67)||(22961842-22961884)
chr2 (28-82)||(38816015-38816068)
chr2 (28-122)||(40831366-40831458)
chr2 (28-106)||(42158930-42159007)
chr2 (19-108)||(42952375-42952461)
chr2 (24-109)||(1294777-1294861)
chr2 (25-82)||(19975266-19975323)
chr2 (25-82)||(42158867-42158924)
chr2 (25-81)||(1858467-1858523)
chr2 (25-109)||(2940756-2940839)
chr2 (25-81)||(11823633-11823688)
chr2 (27-107)||(34789286-34789366)
chr2 (25-108)||(36067058-36067141)
chr2 (16-109)||(1294136-1294229)
chr2 (28-109)||(1859014-1859093)
chr2 (25-79)||(2940148-2940202)
chr2 (26-108)||(32525212-32525294)
chr2 (25-82)||(38815491-38815547)
chr2 (24-69)||(38815532-38815577)
chr2 (19-107)||(19057962-19058050)
chr2 (25-81)||(39317589-39317644)
chr2 (53-104)||(44273462-44273513)
chr2 (24-61)||(42158413-42158450)
chr2 (24-64)||(19974792-19974832)
chr2 (19-51)||(44426185-44426217)
[»] chr1 (31 HSPs)
chr1 (16-112)||(14922038-14922135)
chr1 (24-109)||(40845410-40845493)
chr1 (16-109)||(32473795-32473889)
chr1 (24-109)||(14922487-14922572)
chr1 (25-109)||(6505258-6505341)
chr1 (19-107)||(5564193-5564281)
chr1 (25-107)||(6504666-6504747)
chr1 (25-82)||(5564765-5564822)
chr1 (56-107)||(45286130-45286181)
chr1 (16-104)||(45285380-45285470)
chr1 (25-82)||(26617449-26617506)
chr1 (27-108)||(51247182-51247263)
chr1 (13-82)||(52213997-52214066)
chr1 (27-107)||(6811127-6811206)
chr1 (26-108)||(35166321-35166401)
chr1 (25-82)||(6504750-6504807)
chr1 (25-82)||(6810582-6810639)
chr1 (25-82)||(37596756-37596813)
chr1 (25-82)||(37596946-37597002)
chr1 (25-89)||(26617509-26617573)
chr1 (25-108)||(37596672-37596753)
chr1 (29-107)||(6810499-6810575)
chr1 (24-109)||(35165620-35165703)
chr1 (25-82)||(37597005-37597062)
chr1 (25-82)||(52213937-52213994)
chr1 (25-65)||(5564825-5564865)
chr1 (56-104)||(32473367-32473415)
chr1 (25-65)||(52214551-52214591)
chr1 (32-105)||(30456057-30456127)
chr1 (26-67)||(26616973-26617014)
chr1 (25-107)||(26616908-26616986)
[»] chr8 (37 HSPs)
chr8 (16-109)||(32825043-32825137)
chr8 (16-109)||(14782506-14782599)
chr8 (16-107)||(14786247-14786339)
chr8 (25-107)||(37707332-37707413)
chr8 (25-107)||(38781234-38781316)
chr8 (25-108)||(28936954-28937037)
chr8 (25-108)||(28967849-28967932)
chr8 (27-109)||(14036664-14036746)
chr8 (16-109)||(32825484-32825576)
chr8 (16-105)||(35560311-35560397)
chr8 (25-82)||(38781858-38781915)
chr8 (25-109)||(28991038-28991122)
chr8 (24-108)||(36180949-36181031)
chr8 (25-107)||(28937571-28937653)
chr8 (25-82)||(22201848-22201904)
chr8 (25-82)||(28967789-28967846)
chr8 (25-82)||(28990511-28990568)
chr8 (25-107)||(28990425-28990508)
chr8 (25-82)||(764955-765012)
chr8 (25-82)||(28937040-28937097)
chr8 (25-82)||(38781319-38781376)
chr8 (26-82)||(9513223-9513279)
chr8 (56-108)||(35560756-35560808)
chr8 (25-99)||(764393-764467)
chr8 (25-99)||(22201771-22201845)
chr8 (27-108)||(34233186-34233266)
chr8 (25-82)||(765015-765071)
chr8 (25-82)||(9513164-9513220)
chr8 (25-105)||(28967229-28967307)
chr8 (29-82)||(37707416-37707469)
chr8 (24-67)||(28937541-28937584)
chr8 (24-67)||(28967294-28967337)
chr8 (24-67)||(28991008-28991051)
chr8 (27-82)||(36181536-36181591)
chr8 (26-108)||(40248034-40248116)
chr8 (25-109)||(22202376-22202456)
chr8 (19-51)||(22202341-22202373)
[»] chr4 (23 HSPs)
chr4 (16-107)||(35576715-35576807)
chr4 (25-109)||(51928390-51928472)
chr4 (25-82)||(34268288-34268345)
chr4 (25-109)||(41551257-41551341)
chr4 (26-109)||(38739229-38739312)
chr4 (25-112)||(45752773-45752860)
chr4 (25-108)||(50772761-50772842)
chr4 (16-107)||(50053297-50053390)
chr4 (16-108)||(35577158-35577250)
chr4 (25-82)||(38739316-38739373)
chr4 (25-109)||(34268348-34268431)
chr4 (25-88)||(34267759-34267821)
chr4 (24-109)||(32554711-32554794)
chr4 (25-107)||(45753354-45753435)
chr4 (26-82)||(45753295-45753351)
chr4 (26-89)||(41550693-41550756)
chr4 (26-107)||(36218115-36218195)
chr4 (25-82)||(50772845-50772902)
chr4 (25-81)||(41551197-41551253)
chr4 (7-108)||(50052600-50052705)
chr4 (26-109)||(56251651-56251732)
chr4 (24-67)||(45752847-45752890)
chr4 (56-108)||(38739869-38739921)
[»] chr7 (34 HSPs)
chr7 (25-107)||(28882318-28882400)
chr7 (25-108)||(8295643-8295724)
chr7 (26-88)||(8294446-8294508)
chr7 (16-109)||(33178837-33178929)
chr7 (25-82)||(42941528-42941585)
chr7 (24-108)||(28883172-28883256)
chr7 (24-107)||(37399441-37399521)
chr7 (23-109)||(42432684-42432769)
chr7 (25-82)||(2094477-2094534)
chr7 (25-82)||(28882403-28882460)
chr7 (25-82)||(47379077-47379134)
chr7 (25-89)||(1964095-1964159)
chr7 (25-109)||(42941441-42941525)
chr7 (30-108)||(686138-686213)
chr7 (25-107)||(42942080-42942160)
chr7 (25-82)||(1964035-1964092)
chr7 (28-104)||(6252707-6252782)
chr7 (24-107)||(1963462-1963544)
chr7 (26-104)||(38864857-38864934)
chr7 (25-82)||(8295583-8295640)
chr7 (25-82)||(31902120-31902176)
chr7 (25-89)||(31902604-31902666)
chr7 (24-108)||(33179567-33179648)
chr7 (26-87)||(42791807-42791868)
chr7 (28-109)||(47378506-47378587)
chr7 (42-109)||(686209-686275)
chr7 (25-88)||(2093936-2093999)
chr7 (26-81)||(2094538-2094592)
chr7 (16-109)||(42432025-42432115)
chr7 (27-108)||(19112930-19113009)
chr7 (19-51)||(2094033-2094065)
chr7 (8-67)||(34966081-34966141)
chr7 (19-51)||(47378624-47378656)
chr7 (25-65)||(47379137-47379177)
[»] chr6 (20 HSPs)
chr6 (8-107)||(35051773-35051871)
chr6 (26-108)||(31066405-31066487)
chr6 (27-108)||(29361603-29361683)
chr6 (26-109)||(28924843-28924925)
chr6 (24-108)||(6181128-6181212)
chr6 (25-109)||(17335130-17335213)
chr6 (25-82)||(6180646-6180703)
chr6 (27-88)||(15272892-15272953)
chr6 (25-82)||(17192378-17192435)
chr6 (25-82)||(17335216-17335273)
chr6 (25-82)||(29362156-29362213)
chr6 (25-82)||(31066347-31066404)
chr6 (25-88)||(17191865-17191928)
chr6 (25-107)||(17192438-17192520)
chr6 (25-88)||(32754907-32754970)
chr6 (25-82)||(24813873-24813930)
chr6 (25-65)||(6180603-6180643)
chr6 (28-88)||(17335767-17335827)
chr6 (26-82)||(32754849-32754904)
chr6 (25-65)||(29362216-29362255)
[»] chr5 (42 HSPs)
chr5 (26-108)||(31650405-31650486)
chr5 (16-105)||(6346982-6347071)
chr5 (25-109)||(42501761-42501844)
chr5 (25-108)||(39599345-39599427)
chr5 (25-108)||(43109427-43109510)
chr5 (24-107)||(43110270-43110353)
chr5 (24-82)||(1629403-1629461)
chr5 (25-107)||(42257266-42257347)
chr5 (25-82)||(42501210-42501267)
chr5 (25-109)||(35894115-35894199)
chr5 (25-109)||(35894752-35894834)
chr5 (25-108)||(42501124-42501207)
chr5 (24-114)||(42258111-42258201)
chr5 (25-82)||(1628924-1628980)
chr5 (25-82)||(13359856-13359913)
chr5 (25-82)||(28864149-28864206)
chr5 (25-82)||(39599430-39599487)
chr5 (25-82)||(39599984-39600041)
chr5 (25-82)||(42257350-42257407)
chr5 (25-82)||(42866604-42866661)
chr5 (25-109)||(13359770-13359853)
chr5 (25-103)||(57132-57209)
chr5 (25-67)||(43110242-43110284)
chr5 (24-106)||(43126615-43126696)
chr5 (25-82)||(1628864-1628921)
chr5 (25-82)||(43109513-43109570)
chr5 (56-108)||(6530517-6530569)
chr5 (25-88)||(13360377-13360440)
chr5 (25-105)||(28863282-28863360)
chr5 (26-82)||(35894202-35894258)
chr5 (25-65)||(42258083-42258123)
chr5 (27-82)||(42866546-42866601)
chr5 (25-109)||(42865976-42866057)
chr5 (32-107)||(29185015-29185087)
chr5 (26-81)||(57700-57755)
chr5 (27-82)||(10433044-10433098)
chr5 (26-108)||(10433518-10433598)
chr5 (24-67)||(28863347-28863390)
chr5 (56-106)||(6530127-6530177)
chr5 (19-108)||(12215578-12215666)
chr5 (29-82)||(12216131-12216184)
chr5 (19-51)||(42866091-42866123)
[»] chr3 (20 HSPs)
chr3 (25-109)||(33222009-33222093)
chr3 (25-107)||(38852516-38852597)
chr3 (25-109)||(38929567-38929650)
chr3 (24-109)||(23615765-23615849)
chr3 (25-81)||(33222580-33222636)
chr3 (24-107)||(38853142-38853222)
chr3 (25-107)||(38929015-38929097)
chr3 (25-82)||(38852600-38852657)
chr3 (26-81)||(29252784-29252839)
chr3 (28-107)||(34019754-34019835)
chr3 (25-82)||(34020245-34020302)
chr3 (25-109)||(50681197-50681279)
chr3 (25-108)||(29252451-29252530)
chr3 (24-94)||(38853082-38853152)
chr3 (28-82)||(38929510-38929564)
chr3 (25-82)||(13935257-13935314)
chr3 (28-108)||(34020308-34020387)
chr3 (25-82)||(50681282-50681338)
chr3 (19-51)||(13935751-13935783)
chr3 (25-89)||(33222640-33222704)
[»] scaffold0341 (3 HSPs)
scaffold0341 (25-107)||(6349-6430)
scaffold0341 (25-109)||(6936-7020)
scaffold0341 (26-82)||(6433-6489)
[»] scaffold0508 (2 HSPs)
scaffold0508 (26-82)||(360-415)
scaffold0508 (25-89)||(418-482)
[»] scaffold0045 (1 HSPs)
scaffold0045 (27-82)||(75319-75374)
[»] scaffold0119 (2 HSPs)
scaffold0119 (16-109)||(18044-18137)
scaffold0119 (56-109)||(12409-12462)


Alignment Details
Target: chr2 (Bit Score: 516; Significance: 0; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 516; E-Value: 0
Query Start/End: Original strand, 57 - 624
Target Start/End: Complemental strand, 2235708 - 2235141
Alignment:
Q  57 ggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcctagttaaaattatgtttgaaaaaagttaataaattcatctaggacattg 156  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2235708 ggtaaaattccgattcagtcaaaatacggggggcaaaactgcacttaagcctagttaaaattatgtttgaaaaaagttaataaattcatctaggagattg 2235609  T
Q  157 aatgagaaattatatttagttataaaacatttgttcctatcaatacttttatttagagacggatggagtataagattgcaagaaaaataccaatcatttt 256  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2235608 aatgagaaattatatttagttataaaacattttttcctatcaatacttttatttagagacggatggagtataagattgcaagaaaaataccaatcatttt 2235509  T
Q  257 tagatgcttgtttaatgaacaagaacaaacaaaactaggcagcagccttcctccaaccacatacatacttcctatgtattcatcaaatccaaatcctaat 356  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2235508 tagatgcttgtttaatgaacaagaacaaacaaaactaggcagcaaccttactccaaccacatacatacttcctatgtattcatcaaatccaaatcctaat 2235409  T
Q  357 ttgtgtcctaatatcaatgcgatttcaattaacactgctaattgcagaggatacatacttcctaataaaagacttcaaatgatatatataatagctaggc 456  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2235408 ttgtgtcctaatatcaatgcgatttcaattaacactgataattgcagaggatacagacttcctaataaaagacttcaaatgatatatataatagctaggc 2235309  T
Q  457 ataatccatgataaactctagttctcgctcgatatgcttttccaagatcaatttcaggatcataaagcatttcccacccttcatttgattatgtatcaat 556  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2235308 ataatccatgataaactctagttctcgcttgccatgcttttccaagatcaattttaggatcataaagcatttcccacccttcatttgattatgtatcaat 2235209  T
Q  557 gaactatttcatcacaaggatatgctgtcaatagtttatatacgaggaccaaaattgtaattggtagc 624  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2235208 ggactatttcatcacaaggatatgctgtcaatagtttatatacgaggaccaaaattgtaattggtagc 2235141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 33575421 - 33575497
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaa 104  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  33575421 ggggtaaaattctgagttttaaaata-ggagggtaaaattccaattcaatcaaaata-gaggggcaaaactgcacttaa 33575497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 44426250 - 44426334
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  44426250 ggggggtaaaattccgagttttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcct 44426334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 2236055 - 2236153
Alignment:
Q  8 cgaagaatattaaattgggggg-taaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagc 106  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| ||  ||||||||| | ||||  |||||||| |||||||||||||||||||||||    
T  2236055 cgaaaaatattaaattggggggataaaattccgagttttaaaataggg--ggtaaaatttcgattctgtcaaaata-ggggggcaaaactgcacttaagc 2236151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 19974770 - 19974689
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  19974770 ggggtaaaattccgagttttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcc 19974689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 22962616 - 22962699
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||| |||||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  22962616 gggggtaaaattccaagttttaaaatagggggggtaaaattcagattcaatcaaaatagggggggnaaaattgcatttaagcct 22962699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 39318186 - 39318269
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||||||||||||||||| || ||||||||| | ||||||||||||||| |||||  |||| ||||||||||||||    
T  39318186 gggggtaaaattccgagttttaaaataggg-gggtaaaatccaaattcaatcaaaataagggggataaaattgcacttaagccta 39318269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 31076760 - 31076843
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||||| |||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  31076760 gggggtaaaattccgaattttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcct 31076843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 44273004 - 44272922
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||||||||  ||||||||||  ||||| |||||||| |||||||||||||| |||||| ||||    
T  44273004 ggggtaaaattccgagttttaaaataagggaggtaaaattcagattcagtcaaaata-ggggggcaaaactgtacttaaaccta 44272922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 31076202 - 31076120
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||||| |  |||||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  31076202 gggggtaaaattccgagttttaaaataggaggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcc 31076120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 34788905 - 34788824
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  34788905 gggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcc 34788824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 44425707 - 44425626
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| || ||| |||| |||| |||||||    
T  44425707 gggggtaaaattccgagttttaaaataaggggggtaaaattcagattcaatcaaaata-ggagggtaaaattgcatttaagcc 44425626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 22961856 - 22961771
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||||||| || |||| ||||||  |||||||||||||  |||||| |||| |||| |||||||||    
T  22961856 ggggggtaaaattccgagttttaaaatagggggggtgaaattcagattcaatcaaaatcgggggggtaaaattgcatttaagccta 22961771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 44425767 - 44425710
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  44425767 gggggtaaaattccgagttttaaaataaggggggcaaaattccgattcaatcaaaata 44425710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 38816071 - 38816153
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||| |||||| |||| |||| |||||||||    
T  38816071 gggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaata-ggggggtaaaattgcatttaagccta 38816153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 19975329 - 19975407
Alignment:
Q  28 ggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||||||||||||||| ||||| ||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  19975329 ggtaaaattccgagttttaaaatagggagg-taaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcc 19975407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 22962556 - 22962613
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  22962556 gggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 22962613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 31076262 - 31076205
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  31076262 gggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 31076205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 32525789 - 32525846
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||    
T  32525789 gggggtaaaattccgagttttaaaatatggagggcaaaatcccgattcaatcaaaata 32525846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 34789226 - 34789283
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  34789226 gggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 34789283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 36067201 - 36067144
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  36067201 gggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 36067144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 19058104 - 19058041
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacgggg 87  Q
    ||||||||||||||||||||||||||||||| ||| |||||||  | |||||||||||| ||||    
T  19058104 ggggggtaaaattccgagttttaaaataaggggggcaaaattcagaatcaatcaaaataggggg 19058041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 32525849 - 32525935
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcctagtt 112  Q
    |||||||||||||| |||||||||||| || || ||||||||  |||||||||||||| | |||| |||| |||| ||||||||||||    
T  32525849 gggggtaaaattccaagttttaaaataggggggataaaattcagattcaatcaaaata-gaggggtaaaattgcatttaagcctagtt 32525935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 36067664 - 36067746
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggag-ggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||||||||||||||||| ||||| ||||||||||  ||||||| |||||| |||||| |||| |||| |||||||    
T  36067664 gggggtaaaattccgagttttaaaat-aggagaggtaaaattcagattcaattaaaatagggggggtaaaattgcatttaagcc 36067746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 2940142 - 2940060
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||||||| ||||||||||  | |||||||||||  ||||||||||||||  ||||| |||| |||| |||||||    
T  2940142 gggggtaaaattccgaattttaaaatagagggggtaaaattcagattcaatcaaaatagagggggtaaaattgcatttaagcc 2940060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 22961884 - 22961842
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattcc 67  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  22961884 gggggtaaaattccgagttttaaaataaggggggtaaaattcc 22961842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 38816015 - 38816068
Alignment:
Q  28 ggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  38816015 ggtaaaattccgagttttaaaataagg-gggtaaaatcccgattcaatcaaaata 38816068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 40831366 - 40831458
Alignment:
Q  28 ggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcctagttaaaattatgt 122  Q
    ||||||||||  ||||||||||||||| ||||||||||| |||| |||||||||| || ||| ||||||||| ||||||||| ||| || |||||    
T  40831366 ggtaaaattctaagttttaaaataagg-gggtaaaattcaaatttaatcaaaata-ggagggtaaaactgcatttaagcctatttagaaatatgt 40831458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 42158930 - 42159007
Alignment:
Q  28 ggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagc 106  Q
    |||||||||||||||||| ||||| || |||||||||||  |||||||||||||| |||||| |||| |||| ||||||    
T  42158930 ggtaaaattccgagttttgaaataggg-gggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagc 42159007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 42952461 - 42952375
Alignment:
Q  19 aaattggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||| ||||| |||||||||||||||||| || ||||||| ||||| | |||||||||||||||  | ||| ||||||||||||||||||    
T  42952461 aaatagggggataaaattccgagttttaagat-aggagggcaaaatccaaattcaatcaaaata--gagggtaaaactgcacttaagcct 42952375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 1294777 - 1294861
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||| ||||||| ||| |||||||||  |||||||| |  ||||| |||||||| || |||||||||||||||||||||||    
T  1294777 ggggggtaatattccgaatttaaaaataagggaggtaaaatccagattcagtcaaaata-ggagggcaaaactgcacttaagccta 1294861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 19975266 - 19975323
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||| ||||||||||||||| | ||| |||||||| ||||||||||||||    
T  19975266 gggggtaaaatttcgagttttaaaataaagggggcaaaattccgattcaatcaaaata 19975323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 42158867 - 42158924
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||| ||||||||||||||| | ||| |||||||| ||||||||||||||    
T  42158867 gggggtaaaatttcgagttttaaaataaagggggcaaaattccgattcaatcaaaata 42158924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 1858523 - 1858467
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaat 81  Q
    ||||||||||||||||||||||||||| |||||  ||||||| |||||||| |||||    
T  1858523 gggggtaaaattccgagttttaaaatagggaggaaaaaattcaaattcaataaaaat 1858467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 2940756 - 2940839
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||||| ||  || ||||||||  |||||||||||||| | |||| |||| |||| |||||||||    
T  2940756 gggggtaaaattccgagttttaaaat-agtgggataaaattcagattcaatcaaaataggaggggtaaaattgcatttaagccta 2940839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 11823688 - 11823633
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaat 81  Q
    |||||||||||||||||||||||||||||| ||| ||||| | ||||||||||||||    
T  11823688 gggggtaaaattccgagttttaaaataagg-gggcaaaatccaaattcaatcaaaat 11823633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 34789286 - 34789366
Alignment:
Q  27 gggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||| |  |||||||||||  |||||||||||||| || ||  |||| |||| |||||||    
T  34789286 gggtaaaattccgagttttaaaataggaggggtaaaattcagattcaatcaaaatatggaggataaaattgcatttaagcc 34789366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 36067141 - 36067058
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||||||||||||||||    |||||||||||  |||||||||||||| || ||| |||| | || ||||||||    
T  36067141 gggggtaaaattccgagttttaaaatagaaggggtaaaattcagattcaatcaaaatatggagggtaaaattacatttaagcct 36067058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 1294229 - 1294136
Alignment:
Q  16 attaaattggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata-cggggggcaaaactgcacttaagccta 109  Q
    |||||| |||||||||||||| ||||||||||||| ||| |||| |||| || || || ||||||||  ||||||||||| |||| |||||||||    
T  1294229 attaaactggggggtaaaatttcgagttttaaaat-aggggggtgaaatcccgatacagtcaaaataggggggggcaaaattgcatttaagccta 1294136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 1859014 - 1859093
Alignment:
Q  28 ggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||| ||  |  |||||   |||||||||||||||  ||||| |||||||||||||||||||    
T  1859014 ggtaaaattccgagttttaaaataggg--gacaaaatctaaattcaatcaaaatagtgggggtaaaactgcacttaagccta 1859093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 2940202 - 2940148
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaa 79  Q
    ||||||||||||||||||||||||||||||  || ||||| || |||||||||||    
T  2940202 gggggtaaaattccgagttttaaaataagggaggcaaaatcccgattcaatcaaa 2940148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 32525294 - 32525212
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    ||||||||||||||| ||||||||||  | |||||||||||  ||||||||||||||  ||||  |||| |||| ||||||||    
T  32525294 ggggtaaaattccgaattttaaaatagagggggtaaaattcagattcaatcaaaatagaggggataaaattgcatttaagcct 32525212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 38815547 - 38815491
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||| ||||||||||| ||| ||| ||||||| |||||||||||||||    
T  38815547 gggggtaaaattccaagttttaaaat-aggggggcaaaattcaaattcaatcaaaata 38815491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 38815577 - 38815532
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaa 69  Q
    ||||||||||||||||||||||||||||  | ||||||||||||||    
T  38815577 ggggggtaaaattccgagttttaaaatagagggggtaaaattccaa 38815532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 19058050 - 19057962
Alignment:
Q  19 aaattggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||| ||||| ||||||||  ||||||||||||  | | ||||||| | ||||||||||||||| ||| || ||||||||| |||||||    
T  19058050 aaatagggggataaaattcttagttttaaaatagagggagtaaaatccaaattcaatcaaaataggggaggtaaaactgcatttaagcc 19057962  T

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Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 39317644 - 39317589
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaat 81  Q
    |||||||||||||| ||||||||||| ||| ||| ||||||| ||||||||||||||    
T  39317644 gggggtaaaattccaagttttaaaat-aggggggcaaaattcaaattcaatcaaaat 39317589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 44273462 - 44273513
Alignment:
Q  53 ggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaa 104  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||| ||||||    
T  44273462 ggagggtaaaattccgattcagtcaaaataggggaggcaaaactgaacttaa 44273513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 42158450 - 42158413
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaa 61  Q
    |||||||||||||||||||||||||||| || ||||||    
T  42158450 ggggggtaaaattccgagttttaaaatagggggggtaa 42158413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 19974832 - 19974792
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaat 64  Q
    |||||||||||||||||||||||||||| ||| || |||||    
T  19974832 ggggggtaaaattccgagttttaaaatagggaaggcaaaat 19974792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 44426185 - 44426217
Alignment:
Q  19 aaattggggggtaaaattccgagttttaaaata 51  Q
    |||| ||||||||||||||||||||||||||||    
T  44426185 aaataggggggtaaaattccgagttttaaaata 44426217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 3e-31; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 14922135 - 14922038
Alignment:
Q  16 attaaattgggggg-taaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcctagtt 112  Q
    |||||||||||||| ||||||||| ||||||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  14922135 attaaattgggggggtaaaattccaagttttaaaataagaggggtaaaattccgattcagtcaaaatacggggggcaaaactgcacttaagcctagtt 14922038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 40845410 - 40845493
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||||||| ||  ||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  40845410 ggggggtaaaattccgagttttaaaataggg--ggtaaaattccgatttaatcaaaatacggggggcaaaactgcacttaagccta 40845493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 32473795 - 32473889
Alignment:
Q  16 attaaattgggg-ggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||| |||||||||||||||||||||||| || |||||||||| | ||||| |||||||| |||||| |||||||||||||||||||    
T  32473795 attaaattgggggggtaaaattccgagttttaaaatagggggggtaaaatttcgattcagtcaaaataggggggggaaaactgcacttaagccta 32473889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 14922487 - 14922572
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||||  |||||||| |||||| |||||||||||||||||||    
T  14922487 ggggggtaaaattccgagttttaaaatagggggggtaaaattccgattctgtcaaaatagggggggaaaaactgcacttaagccta 14922572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 6505258 - 6505341
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||||||||||||||||| || ||| ||||||| || |||||||||||| |||||| |||||||||||||||||||    
T  6505258 gggggtaaaattccgagttttaaaataggg-gggcaaaattcaaaatcaatcaaaatagggggggtaaaactgcacttaagccta 6505341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 5564281 - 5564193
Alignment:
Q  19 aaattggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||| |||||||||||||| ||||||||||||| || ||||||||||| |||||||||||||||  ||||| |||| |||| |||||||    
T  5564281 aaataggggggtaaaattctgagttttaaaatagggggggtaaaattcaaattcaatcaaaatagagggggtaaaattgcatttaagcc 5564193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 6504747 - 6504666
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  6504747 gggggtaaaattccgagttttaaaatagggaggataaaattcagattcaatcaaaata-ggggggtaaaattgcatttaagcc 6504666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 5564765 - 5564822
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  5564765 gggggtaaaattccgagttttaaaataaggggggcaaaattccgattcaatcaaaata 5564822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 45286130 - 45286181
Alignment:
Q  56 gggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  45286130 gggtaaaattccgattcagtcaaaatacggggggcaaaactgcacttaagcc 45286181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 45285470 - 45285380
Alignment:
Q  16 attaaattgggggg-taaaattccgagttttaaaataag-gagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaa 104  Q
    |||||||||||||| ||||||||| |||||||||||| | | |||||||||||||||||  |||||||| |||  ||||||||||||||||    
T  45285470 attaaattgggggggtaaaattccaagttttaaaataggagggggtaaaattccaattctgtcaaaataggggaagcaaaactgcacttaa 45285380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 26617449 - 26617506
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  26617449 gggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 26617506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 51247182 - 51247263
Alignment:
Q  27 gggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||| ||||||||||||||  | ||| ||||| | ||||||||||||||| |||||  ||||||||||||||||||    
T  51247182 gggtaaaatttcgagttttaaaatagagggggcaaaatccaaattcaatcaaaataggggggataaaactgcacttaagcct 51247263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 52214066 - 52213997
Alignment:
Q  13 aatattaaattggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||| |||| | ||||||||||||| ||||||||||||||| ||| ||||| |||||||||||||||||    
T  52214066 aatataaaatagaggggtaaaattccaagttttaaaataaggggggcaaaatcccaattcaatcaaaata 52213997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 6811127 - 6811206
Alignment:
Q  27 gggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||||| | |||  |||| |||| |||||||    
T  6811127 gggtaaaattccgagttttaaaataa-gagggtaaaattcagattcaatcaaaataggagggataaaattgcatttaagcc 6811206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 35166321 - 35166401
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||||||||||||||| |  ||||||||| || ||||| |||||| | ||||| ||||| |||||||||||||    
T  35166321 ggggtaaaattccgagttttaaaatatg--gggtaaaatcccgattcagtcaaaacaggggggacaaaattgcacttaagcct 35166401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 6504807 - 6504750
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||| | ||| ||||| || ||||||||||||||    
T  6504807 gggggtaaaattccgagttttaaaataacgggggcaaaatcccgattcaatcaaaata 6504750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 6810639 - 6810582
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||| ||||||    
T  6810639 gggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaattaaaata 6810582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 37596813 - 37596756
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||  ||| ||||| || ||||||||||||||    
T  37596813 gggggtaaaattccgagttttaaaataagaggggcaaaatcccgattcaatcaaaata 37596756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 37596946 - 37597002
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||| ||||||||    
T  37596946 gggggtaaaattccgagttttaaaataagg-gggcaaaattccgattcagtcaaaata 37597002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 26617509 - 26617573
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacgggggg 89  Q
    |||||||||||||||| ||||||||||  | |||||||||||  |||||||||||||| ||||||    
T  26617509 gggggtaaaattccgaattttaaaatagagggggtaaaattcagattcaatcaaaataggggggg 26617573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 37596753 - 37596672
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||| |||||||||||| ||  ||| |||||| |||||||||||||||  ||||| |||| |||| ||||||||    
T  37596753 gggggtaaaattccaagttttaaaataggg--ggtgaaattcaaattcaatcaaaatagagggggtaaaattgcatttaagcct 37596672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 6810575 - 6810499
Alignment:
Q  29 gtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||||||||||||| ||| |||||||||||  |||||||||||||| || ||| |||| |||| |||||||    
T  6810575 gtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaata-ggagggtaaaattgcatttaagcc 6810499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 35165703 - 35165620
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||| ||||||| ||||||||||  |||| ||||||||  ||||| | ||||||  || ||||||||||||||||||||||    
T  35165703 ggggggtaatattccgaattttaaaata--gaggataaaattcagattcagttaaaatagaggtggcaaaactgcacttaagccta 35165620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 37597005 - 37597062
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||| |||||||||||| || |||||||||||  ||||||| ||||||    
T  37597005 gggggtaaaattccaagttttaaaatagggggggtaaaattcagattcaattaaaata 37597062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 52213994 - 52213937
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||| |||||||||||| ||  |||||||||| || ||||||||||||    
T  52213994 gggggtaaaattccaagttttaaaataggggaggtaaaattcaaagtcaatcaaaata 52213937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 5564825 - 5564865
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaatt 65  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  5564825 gggggtaaaattccgagttttaaaatagggggggtaaaatt 5564865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 32473415 - 32473367
Alignment:
Q  56 gggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaa 104  Q
    |||||||||||| ||| | |||||||| |||||||||||||||||||||    
T  32473415 gggtaaaattccgatttagtcaaaatagggggggcaaaactgcacttaa 32473367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 52214551 - 52214591
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaatt 65  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  52214551 gggggtaaaattccgagttttaaaatagggggggtaaaatt 52214591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 30456127 - 30456057
Alignment:
Q  32 aaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaag 105  Q
    ||||||||||||||||||| ||  ||| ||||| | |||||||||||||||  ||||| |||||||||||||||    
T  30456127 aaattccgagttttaaaat-agaggggcaaaatccaaattcaatcaaaata--gggggtaaaactgcacttaag 30456057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 26617014 - 26616973
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattcc 67  Q
    ||||||||||||||||||||||||||  | ||||||||||||    
T  26617014 ggggtaaaattccgagttttaaaatagagggggtaaaattcc 26616973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 26616986 - 26616908
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||| |||  | ||| |||||||  ||||||||||||||  ||||| |||| |||| |||||||    
T  26616986 gggggtaaaattccgagttttaacata--gggggcaaaattcagattcaatcaaaata--gggggtaaaattgcatttaagcc 26616908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 5e-27; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 32825137 - 32825043
Alignment:
Q  16 attaaattgggggg-taaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||| ||||||||||||||||||||||  | |||||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  32825137 attaaattgggggggtaaaattccgagttttaaaatagagggggtaaaattccgattctgtcaaaatacggggggcaaaactgcacttaagccta 32825043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 14782599 - 14782506
Alignment:
Q  16 attaaattggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||| ||||||||||| |||||||||||||| || |||||||||||| ||| | |||||||| ||||||| ||||||||||||||||||    
T  14782599 attaaattgtggggtaaaatttcgagttttaaaatagggggggtaaaattccgatttagtcaaaatagggggggcgaaactgcacttaagccta 14782506  T

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Target: chr8; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 14786247 - 14786339
Alignment:
Q  16 attaaattgggg-ggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||| || |||||||||||||||||||||||| || |||||||||||| ||||| || ||||| ||||||||||||||||||||||||    
T  14786247 attaaattgaggaggtaaaattccgagttttaaaatagggggggtaaaattccgattcagtcgaaatagggggggcaaaactgcacttaagcc 14786339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 37707413 - 37707332
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  37707413 gggggtaaaattccgagttttaaaatagggagggtaaaattcagattcaatcaaaata-ggggggtaaaattgcatttaagcc 37707332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 38781316 - 38781234
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  38781316 gggggtaaaattccgagttttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcc 38781234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 28937037 - 28936954
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||||| |||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  28937037 gggggtaaaattccgaattttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcct 28936954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 28967849 - 28967932
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||||| |||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  28967849 gggggtaaaattccgaattttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcct 28967932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 14036746 - 14036664
Alignment:
Q  27 gggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||||||  ||| ||||| || |||||||||||||| |||||| |||| |||| |||||||||    
T  14036746 gggtaaaattccgagttttaaaataagaggggcaaaatcccgattcaatcaaaatagggggggtaaaattgcatttaagccta 14036664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 32825484 - 32825576
Alignment:
Q  16 attaaattgg-ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||   |||||||| |||||| ||||||| |||||||||||    
T  32825484 attaaattggaggggtaaaattccgagttttaaaat-aggagggtaaaattccgattatgtcaaaata-ggggggaaaaactgaacttaagccta 32825576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 35560397 - 35560311
Alignment:
Q  16 attaaattggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaag 105  Q
    |||| |||||||||||||||| ||||||||||||||  | |||||||||||||||||  |||||||| || |||||||||||||||||||    
T  35560397 attatattggggggtaaaatttcgagttttaaaata--gggggtaaaattccaattctgtcaaaata-ggagggcaaaactgcacttaag 35560311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 38781858 - 38781915
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  38781858 gggggtaaaattccgagttttaaaataaggggggtaaaattcagattcaatcaaaata 38781915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 28991038 - 28991122
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||||||||||||||||| || ||| |||||||  ||||||||||||||  ||||| |||| |||| |||||||||    
T  28991038 gggggtaaaattccgagttttaaaatagggggggcaaaattcagattcaatcaaaatagagggggtaaaattgcatttaagccta 28991122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 36181031 - 36180949
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    ||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  36181031 ggggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaata-ggggggtaaaattgcatttaagcct 36180949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 28937571 - 28937653
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||||| || ||| |||||||  ||||||||||||||  ||||| |||| |||| |||||||    
T  28937571 gggggtaaaattccgagttttaaaatagggggggcaaaattcagattcaatcaaaatagagggggtaaaattgcatttaagcc 28937653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 22201904 - 22201848
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  22201904 gggggtaaaattccgagttttaaaataagg-gggtaaaatcccgattcaatcaaaata 22201848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 28967789 - 28967846
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  28967789 gggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 28967846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 28990568 - 28990511
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  28990568 gggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 28990511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 28990508 - 28990425
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggaggg-taaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||||||| |||||||||| || ||| ||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  28990508 gggggtaaaattccgaattttaaaataggggggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcc 28990425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 764955 - 765012
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||| ||||||||||||| ||| ||||| || ||||||||||||||    
T  764955 gggggtaaaattccgaattttaaaataaggggggcaaaatcccgattcaatcaaaata 765012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 28937097 - 28937040
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||| ||||||||||||||| ||| ||||| || ||||||||||||||    
T  28937097 gggggtaaaattccaagttttaaaataaggggggcaaaatcccgattcaatcaaaata 28937040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 38781376 - 38781319
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||| || ||| ||||| || ||||||||||||||    
T  38781376 gggggtaaaattccgagttttaaaatatggggggcaaaatcccgattcaatcaaaata 38781319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 9513279 - 9513223
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||| |||||||||||||||| ||| ||||| | |||||||||||||||    
T  9513279 ggggtaaaattctgagttttaaaataaggggggcaaaatccaaattcaatcaaaata 9513223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 35560756 - 35560808
Alignment:
Q  56 gggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||| ||||  ||||||||||| ||||||||||||||||||||||    
T  35560756 gggtaaaattccgattctgtcaaaatacggcgggcaaaactgcacttaagcct 35560808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 764467 - 764393
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgca 99  Q
    |||||||||||||||| ||||||||||  | || ||||||||  |||||||||||||| |||||| |||| ||||    
T  764467 gggggtaaaattccgaattttaaaatagaggggataaaattcagattcaatcaaaatagggggggtaaaattgca 764393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 22201845 - 22201771
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgca 99  Q
    |||||||||||||||| |||||||||| || | |||||||||  ||||||||||||||  ||||| |||| ||||    
T  22201845 gggggtaaaattccgaattttaaaatagggggagtaaaattcagattcaatcaaaatagagggggtaaaattgca 22201771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 34233186 - 34233266
Alignment:
Q  27 gggtaaaattccgagttttaaaataaggaggg-taaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||| |||||||||| ||||| |||||| ||||||||  ||||| |||||||| || ||||||||||||||||||||||    
T  34233186 gggtaaaactccgagttttgaaata-ggagggataaaattcagattcagtcaaaata-ggagggcaaaactgcacttaagcct 34233266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 765015 - 765071
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||| ||||||||| ||| |||||||||||  ||||||||||||||    
T  765015 gggggtaaaattccgaattttaaaat-aggggggtaaaattcagattcaatcaaaata 765071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 9513220 - 9513164
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||  ||||| | |||||||||||||||    
T  9513220 gggggtaaaattccgagttttaaaataagg-ggacaaaatccaaattcaatcaaaata 9513164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 28967307 - 28967229
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaag 105  Q
    |||||||||||||||||||||||||||  | ||| |||||||  ||||||||||||||  ||||| |||| |||| |||||    
T  28967307 gggggtaaaattccgagttttaaaata--gggggcaaaattcagattcaatcaaaatagagggggtaaaattgcatttaag 28967229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 37707469 - 37707416
Alignment:
Q  29 gtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||  || ||||| || ||||||||||||||    
T  37707469 gtaaaattccgagttttaaaataagggaggcaaaatcccgattcaatcaaaata 37707416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 28937541 - 28937584
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattcc 67  Q
    ||||||||||||||||||||||||||||  | ||||||||||||    
T  28937541 ggggggtaaaattccgagttttaaaatagagggggtaaaattcc 28937584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 28967337 - 28967294
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattcc 67  Q
    ||||||||||||||||||||||||||||  | ||||||||||||    
T  28967337 ggggggtaaaattccgagttttaaaatagagggggtaaaattcc 28967294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 28991008 - 28991051
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattcc 67  Q
    ||||||||||||||||||||||||||||  | ||||||||||||    
T  28991008 ggggggtaaaattccgagttttaaaatagagggggtaaaattcc 28991051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 36181536 - 36181591
Alignment:
Q  27 gggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||| |||| |||||||||||| ||| ||||| || ||||||||||||||    
T  36181536 gggtaaaatttcgaggtttaaaataaggggggaaaaatcccgattcaatcaaaata 36181591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 40248034 - 40248116
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggaggg-taaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    ||||||| ||||||| |||||||||  |||||| ||||||||  ||||| |||||||| ||| ||||||| |||||||||||||    
T  40248034 ggggtaatattccgaattttaaaatt-ggagggataaaattcagattcagtcaaaataggggtggcaaaattgcacttaagcct 40248116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 22202376 - 22202456
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||| ||||||||||||||||||||||  | |||||||||||  ||||||||||| ||  ||||| |||| |||| |||||||||    
T  22202376 ggggataaaattccgagttttaaaata--gggggtaaaattcagattcaatcaaagta--gggggtaaaattgcatttaagccta 22202456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 22202341 - 22202373
Alignment:
Q  19 aaattggggggtaaaattccgagttttaaaata 51  Q
    |||| ||||||||||||||||||||||||||||    
T  22202341 aaataggggggtaaaattccgagttttaaaata 22202373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 7e-26; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 35576807 - 35576715
Alignment:
Q  16 attaaattg-gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||| |||||||||||||||||||||||||||  | |||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  35576807 attaaattgagggggtaaaattccgagttttaaaatagagggggtaaaattccgattctgtcaaaatacggggggcaaaactgcacttaagcc 35576715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 51928390 - 51928472
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||| |||| |||| |||||||||    
T  51928390 gggggtaaaattccgagttttaaaat-aggagggtaaaattcagattcaatcaaaata-ggggggtaaaattgcatttaagccta 51928472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 34268288 - 34268345
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  34268288 gggggtaaaattccgagttttaaaataaggggggcaaaatcccaattcaatcaaaata 34268345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 41551257 - 41551341
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||| || |||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| |||||||||    
T  41551257 gggggtaaaattctgaattttaaaatagggggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagccta 41551341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 38739312 - 38739229
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||||| |  |||||||||||  |||||||||||||| ||| || |||| |||| |||||||||    
T  38739312 ggggtaaaattccgagttttaaaataggaggggtaaaattcagattcaatcaaaatatgggaggtaaaattgcatttaagccta 38739229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 112
Target Start/End: Complemental strand, 45752860 - 45752773
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcctagtt 112  Q
    ||||||||||||||||||||||||||| || ||| |||||||  ||||||||||||||  ||||| |||| |||| ||||||| ||||    
T  45752860 gggggtaaaattccgagttttaaaatagggggggcaaaattcagattcaatcaaaatagagggggtaaaattgcatttaagccaagtt 45752773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 50772842 - 50772761
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||| || ||| ||||||||| ||||||||    
T  50772842 gggggtaaaattccgagttttaaaat-aggggggcaaaattcaaattcaatcaaaata-ggagggtaaaactgcatttaagcct 50772761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 50053297 - 50053390
Alignment:
Q  16 attaaattggggggtaaaattccgagttttaaaata--aggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||| || ||||||||||||||||||||||||||   || ||||||||| || ||||| |||||||| |||| |||||| ||||||||||||    
T  50053297 attaaaatgaggggtaaaattccgagttttaaaatagggggggggtaaaatcccgattcagtcaaaatagggggagcaaaattgcacttaagcc 50053390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 35577158 - 35577250
Alignment:
Q  16 attaaattgggg-ggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||| ||||||||| ||||| |||||||| |  ||||||||||||  |||  |||||||| |||||||||||||||||||||||||    
T  35577158 attaaattggggaggtaaaatttcgagtattaaaataggaggggtaaaattccggttctgtcaaaata-ggggggcaaaactgcacttaagcct 35577250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 38739373 - 38739316
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||| | ||| |||||||| ||||||||||||||    
T  38739373 gggggtaaaattccgagttttaaaataaagggggcaaaattccgattcaatcaaaata 38739316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 34268348 - 34268431
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||||||||||||||||| || |||| ||||||  |||||||||||||| || ||| |||| |||| |||||||||    
T  34268348 gggggtaaaattccgagttttaaaatagggggggtgaaattcagattcaatcaaaata-ggagggtaaaattgcatttaagccta 34268431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 34267821 - 34267759
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggg 88  Q
    |||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||| |||||    
T  34267821 gggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaatagggggg 34267759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 32554794 - 32554711
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||||||| ||  |||||||| || |||||  |||||||  |||||||||| || |||||||||||    
T  32554794 ggggggtaaaattccgagttttaaaataggggtggtaaaatcccgattcagccaaaata--gggggcaaaattgtacttaagccta 32554711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 45753354 - 45753435
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||| ||||||||||||||||||||||  | |||||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  45753354 ggggataaaattccgagttttaaaatagag-gggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcc 45753435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 45753295 - 45753351
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||| | ||| ||||| || ||||||||||||||    
T  45753295 ggggtaaaattccgagttttaaaataaagggggcaaaatcccgattcaatcaaaata 45753351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 41550756 - 41550693
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacgggggg 89  Q
    ||||||||||||| | |||||||||| || |||||||||||  |||||||||||||| ||||||    
T  41550756 ggggtaaaattccaaattttaaaatagggggggtaaaattcagattcaatcaaaataggggggg 41550693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 36218115 - 36218195
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggaggg-taaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||| | ||||||||||| ||||||| ||||||||  ||||| |||||||| ||||| ||||||||||||||||||    
T  36218115 ggggtaaaatttcaagttttaaaat-aggagggataaaattcagattcagtcaaaata-gggggacaaaactgcacttaagcc 36218195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 50772902 - 50772845
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||  ||| |||||||  |||| |||||||||    
T  50772902 gggggtaaaattccgagttttaaaataagaggggcaaaattcagattctatcaaaata 50772845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 41551197 - 41551253
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaat 81  Q
    |||||||||||| |||||||||||||||   ||| |||||||| |||||||||||||    
T  41551197 gggggtaaaatttcgagttttaaaataaatggggcaaaattccgattcaatcaaaat 41551253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 50052705 - 50052600
Alignment:
Q  7 tcgaagaatattaaattggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata----cggggggcaaaactgcactt 102  Q
    ||||| || ||||||||||||||||| ||||||| |||||||||| ||  | |||||| |  ||||| ||||||||     ||||||||||||| |||||    
T  50052705 tcgaaaaacattaaattggggggtaatattccgaattttaaaataggggagataaaatgcagattcagtcaaaatagggggggggggcaaaactacactt 50052606  T
Q  103 aagcct 108  Q
    ||||||    
T  50052605 aagcct 50052600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 56251732 - 56251651
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||  ||||||||||||| | || | ||||||| |||||||||||||||  ||||| | ||||||| |||||||||    
T  56251732 ggggtaaaattttgagttttaaaataggaagagcaaaattcaaattcaatcaaaata--gggggtagaactgcatttaagccta 56251651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 45752890 - 45752847
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattcc 67  Q
    ||||||||||||||||||||||||||||  | ||||||||||||    
T  45752890 ggggggtaaaattccgagttttaaaatagagggggtaaaattcc 45752847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 38739869 - 38739921
Alignment:
Q  56 gggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  38739869 gggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcct 38739921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 3e-22; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 28882400 - 28882318
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  28882400 gggggtaaaattccgagttttaaaatagggagggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcc 28882318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 8295643 - 8295724
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  8295643 gggggtaaaattccgagttttaaaataagg-gggtaaaattcagattcaatcaaaata-ggggggtaaaattgcatttaagcct 8295724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 8294508 - 8294446
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggg 88  Q
    |||||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||    
T  8294508 ggggtaaaattccgagttttaaaatagggggggtaaaattcaaattcaatcaaaatagggggg 8294446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 33178929 - 33178837
Alignment:
Q  16 attaaattgggggg-taaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||| ||||||| ||||||||||||||||||||| ||| |||||||||| | ||||| |||||||| ||||||||||| ||||||||||||||    
T  33178929 attaaactggggggataaaattccgagttttaaaat-aggggggtaaaatttcgattcagtcaaaata-ggggggcaaaattgcacttaagccta 33178837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 42941585 - 42941528
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  42941585 gggggtaaaattccgagttttaaaataaggggggcaaaattccgattcaatcaaaata 42941528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 28883172 - 28883256
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||| ||||||||||||| || |||| ||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  28883172 ggggggtaaaattctgagttttaaaatagggggggtgaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcct 28883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 37399441 - 37399521
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||||| ||| ||| ||||| | |||||||||||||||  ||||| |||||||||||||||||    
T  37399441 ggggggtaaaattccgagttttaaaat-aggggggcaaaatccaaattcaatcaaaata--gggggtaaaactgcacttaagcc 37399521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 42432684 - 42432769
Alignment:
Q  23 tggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||| ||||||||||||||||||||||  | ||||||||| || ||||| | |||||| |||||| |||||||||||||||||||    
T  42432684 tgggggttaaaattccgagttttaaaatagagggggtaaaatcccgattcagttaaaata-ggggggtaaaactgcacttaagccta 42432769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 2094477 - 2094534
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  2094477 gggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 2094534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 28882460 - 28882403
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||||||    
T  28882460 gggggtaaaatttcgagttttaaaataaggggggcaaaatcccaattcaatcaaaata 28882403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 47379077 - 47379134
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||    
T  47379077 gggggtaaaattccgagttttaaaatatggagggcaaaatcccgattcaatcaaaata 47379134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 1964095 - 1964159
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacgggggg 89  Q
    |||||||||||||| |||||||||||| || |||||||||||  |||||||||||||| ||||||    
T  1964095 gggggtaaaattccaagttttaaaatagggggggtaaaattcagattcaatcaaaataggggggg 1964159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 42941525 - 42941441
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||| | ||||||||||||   ||||||||||  |||||||||||||| |||||| |||| |||| |||||||||    
T  42941525 gggggtaaaattccaaattttaaaataagagaggtaaaattcagattcaatcaaaatatggggggtaaaattgcatttaagccta 42941441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 686213 - 686138
Alignment:
Q  30 taaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||||||||||| ||  ||||||||| | ||| | |||||||| |||||||||||||||||||||||||    
T  686213 taaaattccgagttttaaaataggg--ggtaaaatttcgattgagtcaaaata-ggggggcaaaactgcacttaagcct 686138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 42942080 - 42942160
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||| |||| | |||| |||| |||||||    
T  42942080 gggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaata-ggggagtaaaattgcatttaagcc 42942160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 1964035 - 1964092
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||| ||||||||| ||| |||||||  ||||||||||||||    
T  1964035 gggggtaaaattccgagtttcaaaataaggggggcaaaattctgattcaatcaaaata 1964092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 6252782 - 6252707
Alignment:
Q  28 ggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaa 104  Q
    ||||||||||||| |||||||||| | ||| ||||||||| ||||||||||||||| | |||||||| || ||||||    
T  6252782 ggtaaaattccgaattttaaaata-gaaggataaaattccgattcaatcaaaatacagagggcaaaattgtacttaa 6252707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 1963544 - 1963462
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||||  ||||||| ||||| || |||||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  1963544 ggggggtaaaattttgagtttttaaataggg-gggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcc 1963462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 38864934 - 38864857
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaa 104  Q
    |||||||||||| |||||||||||| ||| ||||||||||||  || | |||||||| ||||||| ||| |||||||||    
T  38864934 ggggtaaaattctgagttttaaaat-aggggggtaaaattccgtttgagtcaaaataaggggggcgaaaatgcacttaa 38864857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 8295583 - 8295640
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||| ||||||||||||||||| ||| ||||| |  ||||||||||||||    
T  8295583 gggggtaaaatttcgagttttaaaataaggggggcaaaatcctgattcaatcaaaata 8295640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 31902176 - 31902120
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||| |||| |||||||||||| ||||||||| || ||||||||||||||    
T  31902176 gggggtaaaatttcgagatttaaaataagg-gggtaaaatcccgattcaatcaaaata 31902120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 31902604 - 31902666
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacgggggg 89  Q
    |||||||||||||| ||||||||||||  ||||||||||||   |||||||||||||| ||||||    
T  31902604 gggggtaaaattccaagttttaaaata--gagggtaaaattgagattcaatcaaaataggggggg 31902666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 33179567 - 33179648
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    ||||||||| ||||||||||||||||||  | |||||||||||  ||||| |||||||| ||||   ||||||||||||||||||    
T  33179567 ggggggtaatattccgagttttaaaata--gggggtaaaattcagattcagtcaaaata-ggggaaaaaaactgcacttaagcct 33179648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 42791868 - 42791807
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacgggg 87  Q
    |||||||||||| |||||| ||||||||  | ||||||||| ||||||||||||||| ||||    
T  42791868 ggggtaaaattctgagtttcaaaataagaggtgtaaaattcaaattcaatcaaaataggggg 42791807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 109
Target Start/End: Complemental strand, 47378587 - 47378506
Alignment:
Q  28 ggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||||||||||||||  | || ||||||||  |||||||||||||| ||||   |||| |||| |||||||||    
T  47378587 ggtaaaattccgagttttaaaatagaggggataaaattcagattcaatcaaaatagggggactaaaattgcatttaagccta 47378506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 686209 - 686275
Alignment:
Q  42 ttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||| || |||||||||| | ||| | |||||||| ||||| ||||||||||||||||||||    
T  686209 ttttaaaataggg-gggtaaaatttcgatttagtcaaaataggggggacaaaactgcacttaagccta 686275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 2093999 - 2093936
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggg 88  Q
    ||||||||||||  ||  |||||||||||| |||||||||||  |||||||||||||| |||||    
T  2093999 gggggtaaaattttgaagtttaaaataaggggggtaaaattcagattcaatcaaaatagggggg 2093936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 2094538 - 2094592
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaat 81  Q
    |||||||||||| ||||||||||||| ||| ||||||||||  |||||||||||||    
T  2094538 ggggtaaaattcagagttttaaaataggga-ggtaaaattcagattcaatcaaaat 2094592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 42432115 - 42432025
Alignment:
Q  16 attaaattggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||| ||| ||||||| |||||||||| |    ||||||||| |||| | ||||||||  |||||||||||||||||||| ||||    
T  42432115 attaaattggggg-taatattccgaattttaaaatatgagaagtaaaattcaaatttagtcaaaata--gggggcaaaactgcacttaaaccta 42432025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 19113009 - 19112930
Alignment:
Q  27 gggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||| |||||||||||| ||||||| || ||| ||||||||  || | |||||||| || ||||||||||||||||||||||    
T  19113009 gggtgaaattccgagttataaaataggg-gggcaaaattccgtttgagtcaaaata-ggagggcaaaactgcacttaagcct 19112930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 2094065 - 2094033
Alignment:
Q  19 aaattggggggtaaaattccgagttttaaaata 51  Q
    |||| ||||||||||||||||||||||||||||    
T  2094065 aaataggggggtaaaattccgagttttaaaata 2094033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 34966141 - 34966081
Alignment:
Q  8 cgaagaatattaaattgg-ggggtaaaattccgagttttaaaataaggagggtaaaattcc 67  Q
    |||| ||||||||||||| |||||||||||| || |||||||||| |||||  ||||||||    
T  34966141 cgaaaaatattaaattggaggggtaaaattcagatttttaaaatagggaggtcaaaattcc 34966081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 47378656 - 47378624
Alignment:
Q  19 aaattggggggtaaaattccgagttttaaaata 51  Q
    |||| ||||||||||||||||||||||||||||    
T  47378656 aaataggggggtaaaattccgagttttaaaata 47378624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 47379137 - 47379177
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaatt 65  Q
    ||||||||||||||||||||||||||| || || |||||||    
T  47379137 gggggtaaaattccgagttttaaaataggggggataaaatt 47379177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 4e-21; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 8 - 107
Target Start/End: Complemental strand, 35051871 - 35051773
Alignment:
Q  8 cgaagaatattaaattggg-gggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagc 106  Q
    |||| |||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||| ||||| |||||||| ||||| |||||||||||||||||    
T  35051871 cgaaaaatattaaattgggagggtaaaattccaagttttaaaat-aggggggtaaaattccgattcagtcaaaata-gggggacaaaactgcacttaagc 35051774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 31066405 - 31066487
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    ||||||||||||||||||||||||||  | |||||||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  31066405 ggggtaaaattccgagttttaaaatagtgggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcct 31066487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 29361683 - 29361603
Alignment:
Q  27 gggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    ||||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  29361683 gggtaaaattccgagttttaaaatagggggggtaaaattcagattcaatcaaaata-ggggggtaaaattgcatttaagcct 29361603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 28924843 - 28924925
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||| |||||||||| ||||| || | |||||||||  ||||||||||||||  |||||||||||||||||||||||||    
T  28924843 ggggtaaaactccgagttttgaaataggg-gagtaaaattcagattcaatcaaaatagagggggcaaaactgcacttaagccta 28924925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 6181128 - 6181212
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    ||||||||||||||||||||||||||||    |||||||||||  |||||||||||||| |||||  |||| |||| ||||||||    
T  6181128 ggggggtaaaattccgagttttaaaatagaaggggtaaaattcagattcaatcaaaataagggggataaaattgcatttaagcct 6181212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 17335213 - 17335130
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||||||||||||||||| |  |||||||||||  ||||||| |||||| |||||| |||| |||| |||||||||    
T  17335213 gggggtaaaattccgagttttaaaataggaggggtaaaattcagattcaattaaaata-ggggggtaaaattgcatttaagccta 17335130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 6180703 - 6180646
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||  ||| ||||| || ||||||||||||||    
T  6180703 gggggtaaaattccgagttttaaaataagaggggcaaaatcccgattcaatcaaaata 6180646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 15272953 - 15272892
Alignment:
Q  27 gggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggg 88  Q
    ||||||||||||||||||||||||| || |||||||||||  ||||||| |||||| |||||    
T  15272953 gggtaaaattccgagttttaaaatagggggggtaaaattcagattcaattaaaatagggggg 15272892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 17192378 - 17192435
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||| |||||||||||||||| ||| ||||| || ||||||||||||||    
T  17192378 gggggtaaaattctgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 17192435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 17335273 - 17335216
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||| |||||||||||||||| ||| ||||| || ||||||||||||||    
T  17335273 gggggtaaaattctgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 17335216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 29362156 - 29362213
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||| ||||||||||| | ||||||||| || ||||||||||||||    
T  29362156 gggggtaaaattccgaattttaaaataacgggggtaaaatcccgattcaatcaaaata 29362213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 31066347 - 31066404
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||  ||| ||||| || ||||||||||||||    
T  31066347 gggggtaaaattccgagttttaaaataagaggggcaaaatcccgattcaatcaaaata 31066404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 17191928 - 17191865
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggg 88  Q
    |||||||||||||||||||||||||||   |||| |||||||  |||||||||||||| |||||    
T  17191928 gggggtaaaattccgagttttaaaatagaaagggcaaaattcagattcaatcaaaatagggggg 17191865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 17192438 - 17192520
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggaggg-taaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||  |||||||||||||| | |||| |||| |||| |||||||    
T  17192438 gggggtaaaattccgagttctaaaat-aggagggataaaattcagattcaatcaaaataggaggggtaaaattgcatttaagcc 17192520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 32754907 - 32754970
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggg 88  Q
    |||||||||||||||||||||||||||  | ||| ||||| | ||||||||||||||| |||||    
T  32754907 gggggtaaaattccgagttttaaaatagagggggaaaaatccaaattcaatcaaaataaggggg 32754970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 24813930 - 24813873
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||| |||||||||||||||||||| ||||| ||||| || ||||||| ||||||    
T  24813930 gggggtagaattccgagttttaaaataaagagggcaaaatcccgattcaattaaaata 24813873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 6180643 - 6180603
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaatt 65  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  6180643 gggggtaaaattccgagttttaaaatatggggggtaaaatt 6180603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 88
Target Start/End: Original strand, 17335767 - 17335827
Alignment:
Q  28 ggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggg 88  Q
    |||||||||| ||||||||||||| || || ||||||||  |||||||||||||| |||||    
T  17335767 ggtaaaattctgagttttaaaataggggggataaaattcagattcaatcaaaatagggggg 17335827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 32754849 - 32754904
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||| ||||||| ||||| |  ||||||||||||||    
T  32754849 ggggtaaaattccgagttttaaaattaggaggg-aaaatccagattcaatcaaaata 32754904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 29362216 - 29362255
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaatt 65  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  29362216 gggggtaaaattccgagttttaaaat-aggggggtaaaatt 29362255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 7e-20; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 31650405 - 31650486
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||||||||| ||||| || ||||||||||| |||||| ||||||||  ||||||||||||||||||||||||    
T  31650405 ggggtaaaattccgagttttgaaataggg-gggtaaaattcaaattcagtcaaaatagagggggcaaaactgcacttaagcct 31650486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 6346982 - 6347071
Alignment:
Q  16 attaaattggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaag 105  Q
    |||||||||| |||||| ||||||| |||||||||| ||| |||||||| |  ||||| |||||||| ||||||||||||||||||||||    
T  6346982 attaaattggagggtaatattccgaattttaaaatagggaaggtaaaatccagattcagtcaaaatagggggggcaaaactgcacttaag 6347071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 42501761 - 42501844
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| |||||||||    
T  42501761 gggggtaaaattccgagttttaaaatagggcgggtaaaattcagattcaatcaaaata-ggggggtaaaattgcatttaagccta 42501844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 39599427 - 39599345
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    ||||||||||||||||||||||||||| || || |||||||| ||||||||||||||| |||||| |||| |||| ||||||||    
T  39599427 gggggtaaaattccgagttttaaaataggggggataaaattcaaattcaatcaaaata-ggggggtaaaattgcatttaagcct 39599345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 43109510 - 43109427
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    ||||||||||||||||||||||||||| ||  ||||||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  43109510 gggggtaaaattccgagttttaaaataggggaggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcct 43109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 43110270 - 43110353
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||||||||||||||||||| || |||| ||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  43110270 ggggggtaaaattccgagttttaaaatagggggggtgaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcc 43110353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 1629403 - 1629461
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  1629403 ggggggtaaaattccgagttttaaaataaggggggcaaaatcccaattcaatcaaaata 1629461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 42257347 - 42257266
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  42257347 gggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcc 42257266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 42501267 - 42501210
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  42501267 gggggtaaaattccgagttttaaaataaggggggcaaaattccgattcaatcaaaata 42501210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 35894199 - 35894115
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||||||||||||||||| |  |||||||||||  |||||||||||||| |||||  |||| |||| |||||||||    
T  35894199 gggggtaaaattccgagttttaaaataggaggggtaaaattcagattcaatcaaaataggggggataaaattgcatttaagccta 35894115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 35894752 - 35894834
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||||| ||| |||||||||||  |||||||||||||| |||||| |||| |||| |||||||||    
T  35894752 gggggtaaaattccgagttttaaaat-aggggggtaaaattcagattcaatcaaaata-ggggggtaaaattgcatttaagccta 35894834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 42501207 - 42501124
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||||||| |||||||||||   |||||||||||  |||||||||||||| |||||| |||| |||| ||||||||    
T  42501207 gggggtaaaattccgaattttaaaataaaaggggtaaaattcagattcaatcaaaatatggggggtaaaattgcatttaagcct 42501124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 42258111 - 42258201
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcctagttaa 114  Q
    ||||||||||||| |||||||||||||| || |||| ||||||  |||||||||||||| | |||| |||| |||| ||||||||| ||||    
T  42258111 ggggggtaaaatttcgagttttaaaatagggggggtgaaattcagattcaatcaaaataggaggggtaaaattgcatttaagcctatttaa 42258201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 1628980 - 1628924
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  1628980 gggggtaaaattccgagttttaaaataagg-gggcaaaattccgattcaatcaaaata 1628924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 13359913 - 13359856
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  13359913 gggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 13359856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 28864149 - 28864206
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  28864149 gggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 28864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 39599487 - 39599430
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  39599487 gggggtaaaattccgagttttaaaataaggggggaaaaatcccgattcaatcaaaata 39599430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 39599984 - 39600041
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||| || |||||||||||  ||||||||||||||    
T  39599984 gggggtaaaattccgagttttaaaatagggggggtaaaattcagattcaatcaaaata 39600041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 42257407 - 42257350
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||    
T  42257407 gggggtaaaattccgagttttaaaataaggggggcaaaatcccgattcaatcaaaata 42257350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 42866604 - 42866661
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||    
T  42866604 gggggtaaaattctgagttttaaaataaggggggtaaaattcagattcaatcaaaata 42866661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 13359853 - 13359770
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||||||||||||||||| || || | ||||||  |||||||||||||| |||||| |||| |||| |||||||||    
T  13359853 gggggtaaaattccgagttttaaaataggggggatgaaattcagattcaatcaaaata-ggggggtaaaattgcatttaagccta 13359770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 57209 - 57132
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcactta 103  Q
    |||||||||||||  |||||||||||| || ||| ||||| | ||||||||||||||| |||||| |||||||||||||    
T  57209 gggggtaaaattctcagttttaaaatagggtgggcaaaatccaaattcaatcaaaata-ggggggtaaaactgcactta 57132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 43110242 - 43110284
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattcc 67  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  43110242 gggggtaaaattccgagttttaaaataaggggggtaaaattcc 43110284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 43126615 - 43126696
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagc 106  Q
    ||||||||||||||| ||||||||||| ||| ||||||||| |  ||| | |||||||| ||||||||||| |||||||||||    
T  43126615 ggggggtaaaattccaagttttaaaat-aggggggtaaaatcctgatttagtcaaaataaggggggcaaaattgcacttaagc 43126696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 1628921 - 1628864
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||| |  |||||||||||  ||||||||||||||    
T  1628921 gggggtaaaattccgagttttaaaataggaggggtaaaattcatattcaatcaaaata 1628864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 43109570 - 43109513
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||||||  || ||||| || ||||||||||||||    
T  43109570 gggggtaaaattccgagttttaaaataagggaggcaaaatcccgattcaatcaaaata 43109513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 6530517 - 6530569
Alignment:
Q  56 gggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||||||||  ||||  ||||||||||||||||||||||||||||||||||    
T  6530517 gggtaaaattctgattctgtcaaaatacggggggcaaaactgcacttaagcct 6530569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 13360377 - 13360440
Alignment:
Q  25 gggggtaaaattccgagttttaaaata-aggagggtaaaattccaattcaatcaaaatacggggg 88  Q
    ||||||||||||||||||||||||||| |||| ||||||||||  |||||||||||||| |||||    
T  13360377 gggggtaaaattccgagttttaaaatagagga-ggtaaaattcagattcaatcaaaatagggggg 13360440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 28863360 - 28863282
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaag 105  Q
    |||||||||||||||| ||||||||| ||| ||| ||||||| ||||||||||||||| |||||| |||| |||| |||||    
T  28863360 gggggtaaaattccgaattttaaaat-aggggggaaaaattcaaattcaatcaaaata-ggggggtaaaattgcatttaag 28863282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 35894258 - 35894202
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||| ||||||||||||||| ||| ||||| || ||||||||||||||    
T  35894258 ggggtaaaattccaagttttaaaataaggggggcaaaatcccgattcaatcaaaata 35894202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 42258083 - 42258123
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaatt 65  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  42258083 gggggtaaaattccgagttttaaaataaggggggtaaaatt 42258123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 42866546 - 42866601
Alignment:
Q  27 gggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||| ||  ||||| || ||||||||||||||    
T  42866546 gggtaaaattccgagttttaaaataagggggacaaaatcccgattcaatcaaaata 42866601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 42866057 - 42865976
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||| ||||||||||||  | |||||||||||  |||||||||||||| | |||| |||| |||| |||||||||    
T  42866057 gggggtaaaattccaagttttaaaata--gggggtaaaattcagattcaatcaaaata-gcggggtaaaattgcatttaagccta 42865976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 29185087 - 29185015
Alignment:
Q  32 aaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||| |||||||||||| ||  ||||||||||| ||||| || ||||| ||||||| ||||||||||||||||    
T  29185087 aaattccaagttttaaaataggg--ggtaaaattccgattcagtcgaaata-ggggggcgaaactgcacttaagcc 29185015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 57700 - 57755
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaat 81  Q
    |||||||||||||||||||||||||| |  ||| ||||| | ||||||||||||||    
T  57700 ggggtaaaattccgagttttaaaataggtggggcaaaatccaaattcaatcaaaat 57755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 10433098 - 10433044
Alignment:
Q  27 gggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||| ||| ||||||   ||||||||||||||    
T  10433098 gggtaaaattccgagttttaaaataagg-gggcaaaatttagattcaatcaaaata 10433044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 10433518 - 10433598
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    ||||| ||||||| | |||||||||| ||  || ||||| | ||||||||||||| | |||||| ||||||||||||||||||    
T  10433518 ggggtcaaattccaaattttaaaataggg--ggcaaaatccaaattcaatcaaaacagggggggtaaaactgcacttaagcct 10433598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 28863390 - 28863347
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattcc 67  Q
    ||||||||||||||||||||||||||||  | ||||||||||||    
T  28863390 ggggggtaaaattccgagttttaaaatagagggggtaaaattcc 28863347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 6530177 - 6530127
Alignment:
Q  56 gggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagc 106  Q
    |||||||||||| ||||  ||||||||  ||||||||||||||||||||||    
T  6530177 gggtaaaattccgattctgtcaaaatagagggggcaaaactgcacttaagc 6530127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 12215666 - 12215578
Alignment:
Q  19 aaattggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||| |||||||||| |||||||||||| || |||  ||| | ||| | ||||| || |||||| |||||| ||||||||||||||||||    
T  12215666 aaataggggggtaaatttccgagttttataa-aagtggggcacaatccaaattcgataaaaataaggggggtaaaactgcacttaagcct 12215578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 12216131 - 12216184
Alignment:
Q  29 gtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||| ||||||||||||||| | ||||||||| |  ||||||||||||||    
T  12216131 gtaaaatttcgagttttaaaataaagggggtaaaatccagattcaatcaaaata 12216184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 42866123 - 42866091
Alignment:
Q  19 aaattggggggtaaaattccgagttttaaaata 51  Q
    |||| ||||||||||||||||||||||||||||    
T  42866123 aaataggggggtaaaattccgagttttaaaata 42866091  T

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Target: chr3 (Bit Score: 49; Significance: 1e-18; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 33222093 - 33222009
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||||||||||||||||| |  |||||||||||  |||||||||||||| |||||| |||| |||| |||||||||    
T  33222093 gggggtaaaattccgagttttaaaataggaggggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagccta 33222009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 38852597 - 38852516
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||||| || |||||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  38852597 gggggtaaaattccgagttttaaaataggg-gggtaaaattcagattcaatcaaaatagggggggtaaaattgcatttaagcc 38852516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 38929567 - 38929650
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||| ||||||||||| | |||||||||||  |||||||||||||| |||||| |||| |||| |||||||||    
T  38929567 gggggtaaaattccgaattttaaaataaag-gggtaaaattcagattcaatcaaaataaggggggtaaaattgcatttaagccta 38929650  T

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Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 23615849 - 23615765
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    ||||||||||||||| |||||||||||| || |||  |||| | ||||||||||||||| |||||| |||| ||||||||||||||    
T  23615849 ggggggtaaaattccaagttttaaaataggg-gggcgaaatccaaattcaatcaaaatagggggggtaaaattgcacttaagccta 23615765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 33222580 - 33222636
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaat 81  Q
    ||||||||| |||||||||||||||||||| ||| |||||||| |||||||||||||    
T  33222580 gggggtaaatttccgagttttaaaataaggggggcaaaattccgattcaatcaaaat 33222636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 38853142 - 38853222
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||||||  | |||||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  38853142 ggggggtaaaattccgagttttaaaata--gggggtaaaattcagattcaatcaaaata-ggggggtaaaattgcatttaagcc 38853222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 38929097 - 38929015
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||| ||||||||||||| || |||||||||||  ||||||||||||||  |||||  ||| |||| |||||||    
T  38929097 gggggtaaaattctgagttttaaaatagggggggtaaaattcatattcaatcaaaatagagggggtgaaattgcatttaagcc 38929015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 38852657 - 38852600
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||| ||||||||||||||| | ||| |||||||| ||||||||||||||    
T  38852657 gggggtaaaatttcgagttttaaaataaagggggcaaaattccgattcaatcaaaata 38852600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 29252784 - 29252839
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaat 81  Q
    ||||||||||||||||||||||||||| | ||| |||||||  |||||||||||||    
T  29252784 ggggtaaaattccgagttttaaaataaagggggcaaaattcagattcaatcaaaat 29252839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 34019835 - 34019754
Alignment:
Q  28 ggtaaaattccgagttttaaaataaggagggt--aaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    |||||||||||||||||||||||| || |||   ||||| | |||||||||||||||   |||| |||||||||||||||||    
T  34019835 ggtaaaattccgagttttaaaatagggggggagcaaaatccaaattcaatcaaaatagtaggggtaaaactgcacttaagcc 34019754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 34020245 - 34020302
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||| ||| ||| ||||| |  ||||||||||||||    
T  34020245 gggggtaaaattccgagttttaaaattaggggggcaaaatccagattcaatcaaaata 34020302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 50681279 - 50681197
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||| ||| |||||||||||||||||| ||  |||||||| | ||||||||||||||| | |||  ||||||||| |||||||||    
T  50681279 ggggataatattccgagttttaaaataggg--ggtaaaatccaaattcaatcaaaataggagggataaaactgcatttaagccta 50681197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 29252530 - 29252451
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    |||||| ||||||||||||||||||| |||| || ||||| | |||||||||||||||  || || ||||||||||||||||||    
T  29252530 gggggtcaaattccgagttttaaaat-agga-ggcaaaatccaaattcaatcaaaata--ggaggtaaaactgcacttaagcct 29252451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 38853082 - 38853152
Alignment:
Q  24 ggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaa 94  Q
    |||||||||||||||||||||||||||| ||| || ||||| |  | ||||| |||||| |||||| ||||    
T  38853082 ggggggtaaaattccgagttttaaaatagggaaggcaaaatccagaatcaataaaaatagggggggtaaaa 38853152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 82
Target Start/End: Original strand, 38929510 - 38929564
Alignment:
Q  28 ggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||| |||  |||| || ||||||| ||||||    
T  38929510 ggtaaaattccgagttttaaaataaggggggcgaaatcccgattcaataaaaata 38929564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 13935314 - 13935257
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||  ||  ||||| |  ||||||||||||||    
T  13935314 gggggtaaaattccgagttttaaaataagagggacaaaatcctgattcaatcaaaata 13935257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 34020308 - 34020387
Alignment:
Q  28 ggtaaaattccgagttttaaaata-aggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcct 108  Q
    ||||||||| |||||||||||||| |||| || ||||| | ||||||||||||||| |||||  ||||||||| ||||||||    
T  34020308 ggtaaaatttcgagttttaaaatagagga-ggcaaaatccaaattcaatcaaaata-gggggataaaactgcatttaagcct 34020387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 50681338 - 50681282
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||| |||||||| ||| ||||| |  ||||||||||||||    
T  50681338 gggggtaaaattccgagtttt-aaataaggggggaaaaatccagattcaatcaaaata 50681282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 19 - 51
Target Start/End: Original strand, 13935751 - 13935783
Alignment:
Q  19 aaattggggggtaaaattccgagttttaaaata 51  Q
    |||| ||||||||||||||||||||||||||||    
T  13935751 aaataggggggtaaaattccgagttttaaaata 13935783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 33222640 - 33222704
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacgggggg 89  Q
    ||||| ||||||||||||||||||||| |  |||||||||||  ||| || ||||||| ||||||    
T  33222640 gggggaaaaattccgagttttaaaataggaggggtaaaattcagatttaaacaaaataggggggg 33222704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 6430 - 6349
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagcc 107  Q
    ||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||| |||||| |||| |||| |||||||    
T  6430 gggggtaaaattccgagttttaaaatagggaggataaaattcagattcaatcaaaata-ggggggtaaaattgcatttaagcc 6349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 6936 - 7020
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata-cggggggcaaaactgcacttaagccta 109  Q
    |||||||||||||||||||||||||| ||| ||| ||||||| || ||||||||||||  |||||| |||||||||||||||||||    
T  6936 gggggtaaaattccgagttttaaaat-aggggggcaaaattcaaaatcaatcaaaataggggggggtaaaactgcacttaagccta 7020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 6489 - 6433
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||| | ||| ||||| || ||||||||||||||    
T  6489 ggggtaaaattccgagttttaaaataacgggggcaaaatcccgattcaatcaaaata 6433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 360 - 415
Alignment:
Q  26 ggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  360 ggggtaaaattccgagttttaaaataagg-gggtaaaatcccaattcaatcaaaata 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 418 - 482
Alignment:
Q  25 gggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaatacgggggg 89  Q
    |||||||||||||||| ||| ||||||  | |||||||||||  |||||||||||||| ||||||    
T  418 gggggtaaaattccgaatttaaaaatagagggggtaaaattcagattcaatcaaaataggggggg 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 75374 - 75319
Alignment:
Q  27 gggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata 82  Q
    |||||||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  75374 gggtaaaattccgagttttaaaataaggagggcaaaatcccgattcaatcaaaata 75319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 18044 - 18137
Alignment:
Q  16 attaaattggggggtaaaattccgagttttaaaataaggagggtaaaattccaattcaatcaaaata-cggggggcaaaactgcacttaagccta 109  Q
    |||||| |||||||||||||| ||||||||||||| ||| |||| |||| || || || ||||||||  ||||||||||| |||| |||||||||    
T  18044 attaaactggggggtaaaatttcgagttttaaaat-aggggggtgaaatcccgatacagtcaaaataggggggggcaaaattgcatttaagccta 18137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 12409 - 12462
Alignment:
Q  56 gggtaaaattccaattcaatcaaaatacggggggcaaaactgcacttaagccta 109  Q
    |||||||||| | || || |||||||| ||||||||||| ||||||||||||||    
T  12409 gggtaaaatttcgatacagtcaaaatagggggggcaaaattgcacttaagccta 12462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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