View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7618_high_21 (Length: 266)
Name: NF7618_high_21
Description: NF7618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7618_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 40 - 252
Target Start/End: Original strand, 7810622 - 7810850
Alignment:
| Q |
40 |
taggtatgcataatacgttaaccgtaatatagtaatctagcttatgacttaatttaattagttcattaagatatatagttacttgcgaaacaagtaaagt |
139 |
Q |
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| T |
7810622 |
taggtatgcataatacgttaaccgtcatatagtaatctagcttatgacttaatttaattagttcattaagatatatagttacttgcgaaacaagtaaagt |
7810721 |
T |
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| Q |
140 |
aactagttaaactcca----------------tagttgtattttgttgtattgtggacaatatttaaaggcattatatggttaataagatgagtgaaatc |
223 |
Q |
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| T |
7810722 |
aactagttaaactccatagttgtattttgttgtagttgtattttgttgtattgtggacaatatttaaaggcattatatggttaataagatgagtgaaatc |
7810821 |
T |
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| Q |
224 |
aagtttgattttaacaattggtattagag |
252 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
7810822 |
aagtttgattttaacaattggtattagag |
7810850 |
T |
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