View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7619_high_6 (Length: 348)
Name: NF7619_high_6
Description: NF7619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7619_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 19 - 336
Target Start/End: Complemental strand, 39097174 - 39096835
Alignment:
| Q |
19 |
aaagtacctatattgatgaacttggtccacgatacgtagtgcacccaacctaaaaggcctatctccaccacaaattcacgtttatctttctcattttttg |
118 |
Q |
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| T |
39097174 |
aaagtacctatattgatgaacttggtccacgatacgtagtgcacccaacctaagaggcctatctccaccacaaattcacgtttatctttctcattttttg |
39097075 |
T |
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| Q |
119 |
ttcttcctctcccatcacaactacaaacaacagattctatttcgttaacttaacataacatctttctcttgtaccaaatagaacaaaatctaagagaaag |
218 |
Q |
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| T |
39097074 |
ttcttcctctcccatcacaactacaaacaacagattctatttcgttaacttaacataacatctttctcttgtaccaaatagaacaaaatctaagagaaag |
39096975 |
T |
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| Q |
219 |
aaaaactaagaagtccaaggaacatttctacaacatat--------------------acaacatatctttatttcatttaaaagtgtgaatacctact- |
297 |
Q |
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||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || |
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| T |
39096974 |
aaaaactaagaagtccaaggaacatttctgcaacatatttttgtttttggtgcaattgacaacatatctttatttcatttaaaagtgtgaataccttcta |
39096875 |
T |
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| Q |
298 |
-atagtaagtatagttgaacttggatgtctacgtaatatt |
336 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
39096874 |
aatagtaagtatagttgaacttggatgtctacgtaatatt |
39096835 |
T |
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