View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7620_low_8 (Length: 261)
Name: NF7620_low_8
Description: NF7620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7620_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 18 - 244
Target Start/End: Complemental strand, 36630836 - 36630610
Alignment:
| Q |
18 |
aatctcttgtgccaaaagttaactttacgacagattctcttgagagggataatagtaaagatgaattaggcgtaattcctcacttgcaccttcgatgtac |
117 |
Q |
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| T |
36630836 |
aatctcttgtgccaaaagttaactttacgacagattctcttgagagggataatagtaaagatgaattaggcgtaattcctcacttccaccttcgatgtac |
36630737 |
T |
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| Q |
118 |
aaaggacgggttaggccaagttaagtgtgtctctcacccgatcttagcatttcgtcgggccaaatatttagatccaaactcaactttatctcaataaatt |
217 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
36630736 |
aaaagacgggttaggccaagttaagtgtgtctctcacccgatcttagcattacgccgggccaaatatttagatccaaactcaactttatcttaataaatt |
36630637 |
T |
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| Q |
218 |
actggttcaataaggacaaaccacaca |
244 |
Q |
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|| ||||||||||||||||| |||||| |
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| T |
36630636 |
acgggttcaataaggacaaatcacaca |
36630610 |
T |
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