View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7620_low_9 (Length: 225)
Name: NF7620_low_9
Description: NF7620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7620_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 41781974 - 41782171
Alignment:
| Q |
11 |
acatcaccatattatagttctctcaattgttgatgaatatattccataaatcataaagtcaaattgaatatttatcaaagtggttattaatgattttcat |
110 |
Q |
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| T |
41781974 |
acatcaccatattatagttctctcaattgttgatgaatatattccataaatcataaagtcaaattgaatatttatcaaagtggttattaatgattttcat |
41782073 |
T |
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| Q |
111 |
tttaaaattagaaagtgattccaaaacaaagaggaagaaacacacacaaccatatgatttatatacattaagggtgttagtaattatgaactgtaagttt |
210 |
Q |
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| T |
41782074 |
tttaaaattagaaagtgattccaaaacaaagaggaagaaacacacacaaccatatgatttatat--aataagggtgttagtaattatgaactgtaagttt |
41782171 |
T |
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