View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7621_low_11 (Length: 201)

Name: NF7621_low_11
Description: NF7621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7621_low_11
NF7621_low_11
[»] chr4 (55 HSPs)
chr4 (1-78)||(19631748-19631825)
chr4 (1-80)||(26330069-26330148)
chr4 (1-73)||(52183486-52183558)
chr4 (1-77)||(52865942-52866018)
chr4 (3-74)||(8408924-8408995)
chr4 (7-74)||(52567732-52567799)
chr4 (1-78)||(22025363-22025440)
chr4 (4-60)||(2788980-2789036)
chr4 (4-55)||(52181783-52181834)
chr4 (1-55)||(2788798-2788852)
chr4 (1-55)||(2909183-2909237)
chr4 (1-55)||(9320018-9320072)
chr4 (1-74)||(43098171-43098244)
chr4 (4-60)||(31229318-31229374)
chr4 (4-60)||(43098417-43098473)
chr4 (4-60)||(52568200-52568256)
chr4 (4-55)||(5387194-5387245)
chr4 (4-55)||(8408865-8408916)
chr4 (4-55)||(26330012-26330063)
chr4 (15-74)||(52866370-52866429)
chr4 (7-81)||(42116076-42116150)
chr4 (1-63)||(43098474-43098536)
chr4 (15-60)||(2788931-2788976)
chr4 (1-54)||(35046437-35046490)
chr4 (4-61)||(41735814-41735871)
chr4 (15-79)||(8408335-8408399)
chr4 (7-63)||(19632254-19632309)
chr4 (1-53)||(19681203-19681255)
chr4 (4-60)||(26329826-26329882)
chr4 (4-60)||(26329952-26330008)
chr4 (5-68)||(31229249-31229313)
chr4 (7-55)||(35046555-35046603)
chr4 (3-55)||(52181723-52181775)
chr4 (4-55)||(2508270-2508321)
chr4 (4-55)||(9320078-9320129)
chr4 (17-55)||(22025319-22025357)
chr4 (20-78)||(41735958-41736016)
chr4 (29-78)||(22025051-22025100)
chr4 (6-55)||(35046496-35046545)
chr4 (4-73)||(41735743-41735812)
chr4 (20-60)||(2788853-2788893)
chr4 (15-55)||(2909243-2909283)
chr4 (3-55)||(8970834-8970886)
chr4 (4-60)||(22025116-22025172)
chr4 (1-73)||(23085269-23085340)
chr4 (1-72)||(36890399-36890471)
chr4 (15-55)||(43098368-43098408)
chr4 (15-55)||(44916327-44916367)
chr4 (4-55)||(8408410-8408461)
chr4 (1-55)||(2789037-2789091)
chr4 (1-55)||(5387134-5387188)
chr4 (15-60)||(19631826-19631875)
chr4 (15-55)||(30543144-30543184)
chr4 (7-55)||(35023988-35024036)
chr4 (15-55)||(52183440-52183480)
[»] chr8 (70 HSPs)
chr8 (1-81)||(9770857-9770937)
chr8 (1-78)||(39701464-39701541)
chr8 (1-78)||(30576136-30576213)
chr8 (1-73)||(8713835-8713907)
chr8 (1-77)||(45017732-45017808)
chr8 (7-78)||(29794335-29794406)
chr8 (16-74)||(31169570-31169628)
chr8 (1-62)||(36359901-36359962)
chr8 (4-80)||(13771881-13771957)
chr8 (1-77)||(16197014-16197090)
chr8 (1-81)||(41190342-41190421)
chr8 (1-76)||(9277055-9277129)
chr8 (1-79)||(23553338-23553416)
chr8 (4-78)||(36360149-36360223)
chr8 (1-74)||(36314718-36314791)
chr8 (1-74)||(40552750-40552823)
chr8 (1-73)||(4613729-4613801)
chr8 (4-76)||(25737090-25737162)
chr8 (1-81)||(29030189-29030269)
chr8 (1-78)||(9276466-9276544)
chr8 (1-63)||(14871419-14871481)
chr8 (1-55)||(44041359-44041413)
chr8 (1-78)||(29792589-29792666)
chr8 (7-60)||(30576677-30576730)
chr8 (1-66)||(30576731-30576796)
chr8 (15-63)||(23179046-23179094)
chr8 (4-60)||(25730137-25730193)
chr8 (4-60)||(25737623-25737679)
chr8 (1-73)||(45017990-45018062)
chr8 (4-55)||(9770800-9770851)
chr8 (4-55)||(36359968-36360019)
chr8 (1-60)||(39700887-39700946)
chr8 (16-74)||(16208776-16208834)
chr8 (1-55)||(23553939-23553993)
chr8 (1-55)||(43422865-43422919)
chr8 (1-63)||(43423163-43423225)
chr8 (16-77)||(5359087-5359148)
chr8 (1-78)||(9770545-9770622)
chr8 (7-55)||(5358650-5358698)
chr8 (4-60)||(9770674-9770730)
chr8 (15-63)||(40553264-40553312)
chr8 (4-55)||(4613807-4613858)
chr8 (4-55)||(9276998-9277049)
chr8 (4-55)||(13771425-13771476)
chr8 (4-55)||(25730198-25730249)
chr8 (4-55)||(25737684-25737735)
chr8 (7-74)||(34686915-34686982)
chr8 (4-63)||(35434344-35434403)
chr8 (3-77)||(11113536-11113610)
chr8 (1-74)||(6236300-6236373)
chr8 (15-60)||(11113613-11113658)
chr8 (4-64)||(8714428-8714488)
chr8 (4-52)||(9276553-9276601)
chr8 (15-55)||(9770628-9770668)
chr8 (4-60)||(23553417-23553473)
chr8 (4-60)||(29794272-29794328)
chr8 (4-55)||(8713913-8713964)
chr8 (4-55)||(16197096-16197147)
chr8 (4-55)||(16208704-16208755)
chr8 (4-55)||(23553882-23553933)
chr8 (4-55)||(31169499-31169550)
chr8 (4-55)||(36360089-36360140)
chr8 (4-55)||(39700952-39701003)
chr8 (4-55)||(43423107-43423158)
chr8 (5-55)||(25737171-25737221)
chr8 (2-60)||(40553311-40553369)
chr8 (4-41)||(43422939-43422976)
chr8 (7-55)||(8714371-8714419)
chr8 (1-49)||(39700838-39700886)
chr8 (3-63)||(40553372-40553432)
[»] scaffold0027 (3 HSPs)
scaffold0027 (1-75)||(9935-10009)
scaffold0027 (1-74)||(9383-9456)
scaffold0027 (15-60)||(9457-9502)
[»] chr6 (34 HSPs)
chr6 (1-67)||(10862650-10862716)
chr6 (1-79)||(16168449-16168527)
chr6 (1-73)||(32417459-32417531)
chr6 (1-73)||(32423300-32423372)
chr6 (1-78)||(2839610-2839687)
chr6 (6-79)||(2840119-2840192)
chr6 (1-80)||(9902327-9902406)
chr6 (1-78)||(32417775-32417852)
chr6 (1-78)||(32423616-32423693)
chr6 (1-73)||(11527526-11527598)
chr6 (4-60)||(20575602-20575658)
chr6 (4-78)||(11528110-11528184)
chr6 (7-77)||(20575398-20575468)
chr6 (7-79)||(20575715-20575785)
chr6 (1-74)||(16168753-16168826)
chr6 (4-60)||(16168696-16168752)
chr6 (4-55)||(17180144-17180195)
chr6 (1-76)||(24139570-24139644)
chr6 (1-76)||(28630679-28630754)
chr6 (15-60)||(2839688-2839733)
chr6 (15-60)||(11527599-11527644)
chr6 (15-60)||(16168528-16168573)
chr6 (4-49)||(17132220-17132265)
chr6 (26-78)||(17131546-17131598)
chr6 (4-60)||(20575475-20575531)
chr6 (7-55)||(32417537-32417585)
chr6 (7-55)||(32423378-32423426)
chr6 (4-55)||(24139513-24139564)
chr6 (4-54)||(17179693-17179743)
chr6 (1-78)||(17180201-17180278)
chr6 (15-55)||(2840068-2840108)
chr6 (1-73)||(10962728-10962800)
chr6 (15-55)||(32417597-32417637)
chr6 (15-55)||(32423438-32423478)
[»] chr2 (42 HSPs)
chr2 (1-75)||(27893623-27893697)
chr2 (1-74)||(27893023-27893096)
chr2 (1-76)||(30907061-30907135)
chr2 (5-74)||(34336340-34336409)
chr2 (1-78)||(16781111-16781189)
chr2 (1-78)||(31263908-31263986)
chr2 (1-62)||(34429681-34429742)
chr2 (4-60)||(31263987-31264043)
chr2 (1-55)||(8260392-8260446)
chr2 (1-55)||(19081070-19081124)
chr2 (1-78)||(37543142-37543219)
chr2 (4-60)||(30907136-30907192)
chr2 (4-55)||(27893566-27893617)
chr2 (15-77)||(21813191-21813253)
chr2 (1-78)||(36196566-36196641)
chr2 (1-55)||(41265307-41265361)
chr2 (1-74)||(31264221-31264296)
chr2 (1-77)||(32341378-32341454)
chr2 (7-55)||(34336102-34336150)
chr2 (1-60)||(16781051-16781110)
chr2 (4-51)||(30907319-30907366)
chr2 (1-80)||(34336017-34336096)
chr2 (7-53)||(11871759-11871805)
chr2 (1-79)||(30907377-30907455)
chr2 (1-80)||(151639-151717)
chr2 (5-60)||(19080691-19080746)
chr2 (15-49)||(41265261-41265295)
chr2 (1-54)||(37542956-37543008)
chr2 (4-77)||(39376159-39376232)
chr2 (15-55)||(20535970-20536010)
chr2 (15-55)||(27893102-27893142)
chr2 (4-60)||(36196509-36196565)
chr2 (1-64)||(11871813-11871876)
chr2 (4-55)||(31264164-31264215)
chr2 (1-55)||(15505961-15506015)
chr2 (15-73)||(16780928-16780986)
chr2 (1-63)||(19080628-19080690)
chr2 (7-60)||(15506048-15506101)
chr2 (1-78)||(39301886-39301963)
chr2 (7-63)||(42117215-42117271)
chr2 (15-55)||(37543014-37543054)
chr2 (4-48)||(39376412-39376456)
[»] chr1 (38 HSPs)
chr1 (1-79)||(11897826-11897904)
chr1 (1-78)||(27351036-27351113)
chr1 (1-71)||(10685840-10685910)
chr1 (7-73)||(10686782-10686848)
chr1 (4-78)||(39302753-39302827)
chr1 (4-78)||(8903284-8903358)
chr1 (1-76)||(48352804-48352879)
chr1 (1-74)||(29419111-29419184)
chr1 (1-55)||(4030311-4030365)
chr1 (1-79)||(44964136-44964213)
chr1 (7-80)||(34254482-34254555)
chr1 (4-60)||(44964019-44964075)
chr1 (15-55)||(49651017-49651057)
chr1 (4-55)||(27351119-27351170)
chr1 (4-55)||(44964079-44964130)
chr1 (1-55)||(49650581-49650635)
chr1 (15-79)||(4772155-4772219)
chr1 (7-55)||(8902829-8902877)
chr1 (4-60)||(17898853-17898909)
chr1 (1-81)||(27351597-27351677)
chr1 (3-55)||(44963847-44963899)
chr1 (4-55)||(1765933-1765984)
chr1 (4-55)||(34254567-34254618)
chr1 (7-54)||(48352750-48352797)
chr1 (1-55)||(1765990-1766044)
chr1 (5-55)||(17898794-17898844)
chr1 (22-60)||(49650636-49650674)
chr1 (15-60)||(4772653-4772698)
chr1 (1-74)||(17898910-17898983)
chr1 (1-78)||(39302316-39302393)
chr1 (15-55)||(10685916-10685956)
chr1 (15-59)||(27351551-27351595)
chr1 (4-60)||(29419054-29419110)
chr1 (18-60)||(11897905-11897947)
chr1 (4-45)||(10686719-10686760)
chr1 (15-55)||(1765884-1765924)
chr1 (7-55)||(2965499-2965547)
chr1 (7-55)||(44963907-44963955)
[»] chr7 (76 HSPs)
chr7 (1-78)||(5805023-5805100)
chr7 (1-77)||(20366035-20366110)
chr7 (1-63)||(33879578-33879640)
chr7 (1-63)||(34951524-34951586)
chr7 (1-78)||(1346465-1346542)
chr7 (1-74)||(1441495-1441568)
chr7 (1-74)||(36566267-36566340)
chr7 (15-79)||(27995045-27995109)
chr7 (1-80)||(35215386-35215465)
chr7 (1-79)||(8039647-8039725)
chr7 (1-74)||(21433133-21433206)
chr7 (1-78)||(23150624-23150701)
chr7 (1-78)||(31893235-31893312)
chr7 (4-78)||(5559092-5559167)
chr7 (1-79)||(5559680-5559757)
chr7 (1-78)||(21412851-21412928)
chr7 (1-73)||(33235024-33235096)
chr7 (4-55)||(19925343-19925394)
chr7 (4-55)||(28256561-28256612)
chr7 (4-78)||(1440991-1441065)
chr7 (1-63)||(19925105-19925167)
chr7 (1-79)||(31893538-31893616)
chr7 (15-60)||(31893492-31893537)
chr7 (1-78)||(39958672-39958749)
chr7 (2-74)||(5075337-5075409)
chr7 (7-55)||(21412934-21412982)
chr7 (4-60)||(31175962-31176018)
chr7 (4-60)||(35214870-35214926)
chr7 (4-55)||(10619868-10619919)
chr7 (4-55)||(21433340-21433391)
chr7 (4-55)||(36566406-36566457)
chr7 (6-76)||(20366605-20366675)
chr7 (1-63)||(40904691-40904753)
chr7 (15-60)||(5559634-5559679)
chr7 (7-60)||(5805101-5805154)
chr7 (4-60)||(1286433-1286489)
chr7 (1-73)||(4187496-4187568)
chr7 (1-77)||(5805656-5805731)
chr7 (1-73)||(19925400-19925472)
chr7 (7-55)||(21412994-21413042)
chr7 (15-55)||(22876870-22876910)
chr7 (7-55)||(23679539-23679586)
chr7 (15-55)||(31893441-31893481)
chr7 (15-63)||(33235568-33235616)
chr7 (4-60)||(34951290-34951346)
chr7 (4-55)||(1346548-1346599)
chr7 (4-55)||(20366543-20366594)
chr7 (4-55)||(21433212-21433263)
chr7 (4-55)||(27995129-27995180)
chr7 (4-75)||(39959259-39959330)
chr7 (1-55)||(20101831-20101884)
chr7 (1-73)||(1286360-1286432)
chr7 (16-60)||(28256954-28256998)
chr7 (1-53)||(29591119-29591171)
chr7 (4-60)||(33235097-33235153)
chr7 (4-60)||(33879521-33879577)
chr7 (15-55)||(34951418-34951458)
chr7 (4-55)||(4187574-4187625)
chr7 (4-55)||(5805599-5805650)
chr7 (1-74)||(10620288-10620358)
chr7 (4-55)||(23150707-23150758)
chr7 (7-74)||(28256482-28256549)
chr7 (4-55)||(39959199-39959250)
chr7 (7-73)||(27995588-27995654)
chr7 (15-73)||(36566529-36566587)
chr7 (15-60)||(1441449-1441494)
chr7 (15-60)||(31893313-31893358)
chr7 (4-60)||(36566341-36566397)
chr7 (7-55)||(4187698-4187746)
chr7 (4-55)||(5559176-5559228)
chr7 (7-55)||(6220384-6220431)
chr7 (1-73)||(22876916-22876987)
chr7 (26-78)||(23679608-23679660)
chr7 (1-73)||(28256999-28257071)
chr7 (1-73)||(34951218-34951289)
chr7 (4-60)||(40904754-40904810)
[»] chr5 (44 HSPs)
chr5 (1-78)||(36418462-36418539)
chr5 (7-77)||(18951289-18951359)
chr5 (1-74)||(20728517-20728590)
chr5 (1-73)||(35190474-35190546)
chr5 (1-55)||(36417894-36417948)
chr5 (15-80)||(31813958-31814023)
chr5 (1-77)||(13538455-13538531)
chr5 (4-73)||(26275494-26275563)
chr5 (1-77)||(5734449-5734525)
chr5 (1-77)||(13543070-13543146)
chr5 (4-60)||(20728591-20728647)
chr5 (4-60)||(32660322-32660378)
chr5 (4-60)||(36418405-36418461)
chr5 (4-55)||(1722568-1722619)
chr5 (15-74)||(19278694-19278753)
chr5 (4-79)||(19279236-19279311)
chr5 (4-55)||(32660267-32660318)
chr5 (7-74)||(35189903-35189969)
chr5 (4-55)||(35891266-35891317)
chr5 (7-77)||(1722486-1722556)
chr5 (1-55)||(30737748-30737802)
chr5 (1-55)||(38405597-38405651)
chr5 (1-74)||(5735042-5735115)
chr5 (20-73)||(20729116-20729169)
chr5 (4-60)||(6336206-6336262)
chr5 (7-55)||(18249026-18249074)
chr5 (7-55)||(18951371-18951419)
chr5 (4-60)||(30738264-30738320)
chr5 (7-63)||(32459427-32459483)
chr5 (4-55)||(5734986-5735036)
chr5 (4-55)||(20729049-20729100)
chr5 (15-78)||(26276015-26276078)
chr5 (1-68)||(32660194-32660261)
chr5 (17-79)||(14235552-14235614)
chr5 (22-60)||(14235631-14235669)
chr5 (7-60)||(6336146-6336199)
chr5 (15-60)||(35189976-35190021)
chr5 (7-55)||(30737808-30737856)
chr5 (15-55)||(36417954-36417994)
chr5 (7-78)||(13543670-13543741)
chr5 (16-74)||(40744963-40745021)
chr5 (7-80)||(18248941-18249014)
chr5 (7-55)||(18237920-18237968)
chr5 (15-55)||(19278772-19278812)
[»] chr3 (20 HSPs)
chr3 (1-78)||(31247706-31247783)
chr3 (1-76)||(21377061-21377136)
chr3 (1-78)||(54456917-54456994)
chr3 (15-78)||(14629270-14629333)
chr3 (1-63)||(3088155-3088217)
chr3 (1-73)||(35555516-35555589)
chr3 (22-80)||(53782947-53783005)
chr3 (1-74)||(4276124-4276197)
chr3 (15-55)||(4276632-4276672)
chr3 (4-60)||(31247649-31247705)
chr3 (4-55)||(31247195-31247245)
chr3 (4-55)||(35555595-35555646)
chr3 (4-79)||(54456655-54456730)
chr3 (7-73)||(24707457-24707523)
chr3 (9-74)||(50530235-50530300)
chr3 (1-77)||(14964629-14964704)
chr3 (15-55)||(14964741-14964781)
chr3 (4-60)||(54456800-54456856)
chr3 (15-73)||(35555990-35556048)
chr3 (7-55)||(21376634-21376682)
[»] scaffold0019 (4 HSPs)
scaffold0019 (1-78)||(124419-124496)
scaffold0019 (1-60)||(124359-124418)
scaffold0019 (4-74)||(124132-124202)
scaffold0019 (4-55)||(124211-124261)
[»] scaffold0746 (3 HSPs)
scaffold0746 (7-78)||(6-77)
scaffold0746 (1-62)||(597-658)
scaffold0746 (4-60)||(540-596)
[»] scaffold0070 (3 HSPs)
scaffold0070 (1-62)||(28545-28606)
scaffold0070 (4-60)||(28607-28663)
scaffold0070 (16-78)||(29117-29178)
[»] scaffold0041 (2 HSPs)
scaffold0041 (1-63)||(45265-45327)
scaffold0041 (4-60)||(45208-45264)
[»] scaffold0374 (2 HSPs)
scaffold0374 (8-79)||(16057-16128)
scaffold0374 (7-79)||(16157-16229)


Alignment Details
Target: chr4 (Bit Score: 66; Significance: 2e-29; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 19631825 - 19631748
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  19631825 taattgaaactttcgaaacttaaaggactaacttgagaattttgtcaaaataaaaggaccaaacgtgatatttggcct 19631748  T

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Target: chr4; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26330069 - 26330148
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggccttt 80  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| ||| ||||||||||||    
T  26330069 taattgaaactttcaaaacttaaaggactaacttgagaattctgtcaaactaaaaggactaaaagtggtatttggccttt 26330148  T

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Target: chr4; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 52183486 - 52183558
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||| |||||    
T  52183486 taattgaaactttcgaaacttaaaggactaacttgagaattttgtaaaactaaaaggaccaaacgtggtattt 52183558  T

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Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 52866018 - 52865942
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| ||| |||||||||    
T  52866018 taatttaaactttcaaaacttaaaggactaacttgagaattctgtcaaactaaaaggacaaaaagtggtatttggcc 52865942  T

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Target: chr4; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 8408924 - 8408995
Alignment:
Q  3 attgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||||| ||||||||||    
T  8408924 attgaaattttcgaaacttaaatgactaacttgagaattatgtcaaactaaaatgaccaaaagtgatatttg 8408995  T

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Target: chr4; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 52567799 - 52567732
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  52567799 aaacttttgaaacttaaatgactaacttaagaattctgtcaaactaaaaggaccaaacgtgatatttg 52567732  T

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Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22025363 - 22025440
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||| ||| ||| ||  ||||||||||    
T  22025363 taattgaaactttcgaaacttcaaggactaacttgataattatgtcaaactaaaatgactaaaagttgtatttggcct 22025440  T

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Target: chr4; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 2788980 - 2789036
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  2788980 ttgaaacttttgaaacttaaaggactaacttgaaaattctgtcaaactaaaatgacc 2789036  T

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Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 52181834 - 52181783
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  52181834 ttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaa 52181783  T

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Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2788852 - 2788798
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  2788852 taattgaaactttcgaaacttaaaggactaacttgagaatttcatcaaactaaaa 2788798  T

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Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2909237 - 2909183
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||    
T  2909237 taattgacactttcgaaacttaaagaactaacttgagaattctgtgaaactaaaa 2909183  T

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Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9320072 - 9320018
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  9320072 taattgaaactttcgaaacttaaaaaactaacttgagaattttgtcaaactaaaa 9320018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43098244 - 43098171
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||||||| |||||||||||||||||||   |||| ||||||||||||| ||||||| ||| ||||||    
T  43098244 taattgaaactttcaaaacttaaaggactaacttagaaattttgtcaaactaaaaggaccaaaagtggtatttg 43098171  T

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Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 31229374 - 31229318
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||| |||||||||||||||||| ||||||||||| ||||    
T  31229374 ttgaaacttttgaaacttaaatgactaacttgagaattctatcaaactaaaaagacc 31229318  T

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Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 43098417 - 43098473
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  43098417 ttgaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaaggacc 43098473  T

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Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 52568200 - 52568256
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| ||||||||||||||| ||||||||||||| ||||||||||| ||||    
T  52568200 ttgaaacttttgaaacttaaaggactgacttgagaattctatcaaactaaaatgacc 52568256  T

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Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 5387245 - 5387194
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  5387245 ttgaaacttttgaaacttaaagggctaacttgggaattctgtcaaactaaaa 5387194  T

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Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 8408865 - 8408916
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||||||||    
T  8408865 ttgaaacttttgaaacttaaatgactaacttgaaaattctgtcaaactaaaa 8408916  T

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Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 26330012 - 26330063
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  26330012 ttgaaacttttgaaacttaaaggactaacttgggaattctgtaaaactaaaa 26330063  T

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Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 52866370 - 52866429
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||| || ||||||    
T  52866370 gaaacttaaaggactaacttgggaattctgtcaaactaaaagaaccaaacatggtatttg 52866429  T

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Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 42116076 - 42116150
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctttt 81  Q
    ||||||| |||||||||||||||||||| | |||| ||||||||||||| |||||||  || ||||||| |||||    
T  42116076 aaacttttgaaacttaaaggactaacttaaaaattttgtcaaactaaaatgaccaaaaatggtatttggtctttt 42116150  T

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Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43098474 - 43098536
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    ||||||||||||||||||||||||| ||||| ||   |||||||||||||||||| |||||||    
T  43098474 taattgaaactttcgaaacttaaagaactaagttagaaattctgtcaaactaaaaggaccaaa 43098536  T

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Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 2788931 - 2788976
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||    
T  2788931 gaaacttaaatgactaacttgagaattctgtcaaactaaaatgacc 2788976  T

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Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35046490 - 35046437
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaa 54  Q
    ||||| ||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  35046490 taattaaaactttcgaaacttaaaggactaaattgaaaattatgtcaaactaaa 35046437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 41735871 - 41735814
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacca 61  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| ||||||||| |||||    
T  41735871 ttgaaacttttgaaacttaaaggactaacttgggaattatgttaaactaaaaggacca 41735814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 8408399 - 8408335
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    ||||||||||| |||||||||  |||| ||||||||||||| |||||||| ||||||||| ||||    
T  8408399 gaaacttaaagaactaacttggaaattttgtcaaactaaaaggaccaaacttgatatttgacctt 8408335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 19632254 - 19632309
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  19632254 aaacttttgaaacttaaag-actaatttgagaattctgtcaaactaaaaggaccaaa 19632309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19681255 - 19681203
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaa 53  Q
    ||||||||| ||||||||||||||  |||||||||||||||| ||||||||||    
T  19681255 taattgaaaatttcgaaacttaaaaaactaacttgagaattcggtcaaactaa 19681203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 26329882 - 26329826
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||||| ||||||||  |||||||||||||||||| ||||    
T  26329882 ttgaaacttttgaaacttaaagggctaacttggaaattctgtcaaactaaaaggacc 26329826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 26329952 - 26330008
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||| |||||||||| ||||| ||||||||||||| ||||    
T  26329952 ttgaaacttttgaaacttaaatgactaacttgggaattatgtcaaactaaaaggacc 26330008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 31229313 - 31229249
Alignment:
Q  5 tgaaactttcgaaacttaaa-ggactaacttgagaattctgtcaaactaaaacgaccaaacgtga 68  Q
    |||||||||||||||||||| ||||||| |||| |||||||||||| ||||| ||||||| ||||    
T  31229313 tgaaactttcgaaacttaaaaggactaatttgaaaattctgtcaaattaaaaagaccaaatgtga 31229249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 35046555 - 35046603
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  35046555 aaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaa 35046603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 52181775 - 52181723
Alignment:
Q  3 attgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||| ||| |||||| ||||||||||||||| |||||||||||||    
T  52181775 attgaaactttcaaaatttaaagaactaacttgagaattttgtcaaactaaaa 52181723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 2508321 - 2508270
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||| |||||||||||||||||  ||||||||||||||||||    
T  2508321 ttgaaacttttgaagcttaaaggactaacttggaaattctgtcaaactaaaa 2508270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 9320129 - 9320078
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||| ||||| |||||| |||||||||||||||||||||||    
T  9320129 ttgaaacttttgaaatttaaatgactaaattgagaattctgtcaaactaaaa 9320078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 22025319 - 22025357
Alignment:
Q  17 aacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  22025319 aacttaaaggactaacttgggaattctgtcaaactaaaa 22025357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 41735958 - 41736016
Alignment:
Q  20 ttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||| ||||||||| ||||||||||||||||||| || |||| ||| ||||||||||    
T  41735958 ttaaagtactaacttgggaattctgtcaaactaaaaggatcaaaagtggtatttggcct 41736016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 22025100 - 22025051
Alignment:
Q  29 taacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||| ||||||||||||||||||| ||||||| ||| ||||||||||    
T  22025100 taacttgggaattctgtcaaactaaaaggaccaaaagtggtatttggcct 22025051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 35046545 - 35046496
Alignment:
Q  6 gaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||| ||||||||||||||||| ||  |||||||||||||||||||    
T  35046545 gaaacttttgaaacttaaaggactaatttaggaattctgtcaaactaaaa 35046496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 41735812 - 41735743
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||||||| ||||| |||| ||||||||||||||  ||| ||||||||| ||||||| ||| |||||    
T  41735812 ttgaaactttcaaaactaaaagaactaacttgagaatcttgttaaactaaaaggaccaaaagtggtattt 41735743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 2788893 - 2788853
Alignment:
Q  20 ttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  2788893 ttaaagtactaacttgagaattctgtcaaactaaaaggacc 2788853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 2909283 - 2909243
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||| |||||||||||||||||||||||||| |||||||||    
T  2909283 gaaatttaaaggactaacttgagaattctgtaaaactaaaa 2909243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 8970886 - 8970834
Alignment:
Q  3 attgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||||||||   |||| ||||||||||||||||| |||||    
T  8970886 attgaaactttcgaaacttaaaaatctaatttgagaattctgtcaaattaaaa 8970834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 22025172 - 22025116
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||  || ||||| |||||||||| |||||||||||||||||||| ||||    
T  22025172 ttgaaactttttaatcttaacggactaacttaagaattctgtcaaactaaaatgacc 22025116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 23085269 - 23085340
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||||||||| |||||||||| ||||||||| | | ||||||||||||||||  ||||||  ||||||||    
T  23085269 taattgaaacttttgaaacttaaa-gactaacttaaaatttctgtcaaactaaaagaaccaaaaatgatattt 23085340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 36890471 - 36890399
Alignment:
Q  1 taattgaaactttcgaaactta-aaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatt 72  Q
    |||||||||||||| ||||||| ||||||| ||||| |||||| |||| ||||||| ||||||| ||| ||||    
T  36890471 taattgaaactttcaaaacttagaaggactgacttgggaattcagtcatactaaaaggaccaaaagtggtatt 36890399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 43098368 - 43098408
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||||||| ||||||||| |||||||||    
T  43098368 gaaacttaaaggactaacttgggaattctgttaaactaaaa 43098408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 44916327 - 44916367
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  44916327 gaaacttaaaggactaacttgaaaattttgtcaaactaaaa 44916367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 8408461 - 8408410
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||  ||||||||| |||| ||||||||||| |||||||||||||    
T  8408461 ttgaaacttttcaaacttaaaagacttacttgagaattttgtcaaactaaaa 8408410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2789037 - 2789091
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||| | |||||||||||||||| || | |||| |||||||||||||    
T  2789037 taattgaaacttccaaaacttaaaggactaatttaaaaattttgtcaaactaaaa 2789091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5387188 - 5387134
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||  |||||||||||||||||||   ||||| ||||||||||||    
T  5387188 taattgaaacttttaaaacttaaaggactaacttagaaattcagtcaaactaaaa 5387134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 19631875 - 19631826
Alignment:
Q  15 gaaacttaaaggactaa----cttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||||||||||    |||||||||||||||||||||||| ||||    
T  19631875 gaaacttaaaggactaattaacttgagaattctgtcaaactaaaaggacc 19631826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 30543144 - 30543184
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||| ||||||||||||||||| |||| |||||||||||||    
T  30543144 gaaatttaaaggactaacttgataattttgtcaaactaaaa 30543184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 35023988 - 35024036
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||  ||||||||| |||||||||||||||| ||| |||||||||    
T  35023988 aaacttttaaaacttaaaagactaacttgagaattgtgtaaaactaaaa 35024036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 52183440 - 52183480
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||||  |||| |||||||||||||||||||    
T  52183440 gaaacttaaaggactggcttgggaattctgtcaaactaaaa 52183480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 9e-29; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 9770857 - 9770937
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctttt 81  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||    
T  9770857 taattgaaactttcgaaacttaaaggactaacttgagaattttgtcaaactaaaaggaccaaaagtggtatttggcctttt 9770937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39701464 - 39701541
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  39701464 taattgaaacttttgaaacttaaagaactaacttgagaattctgtcaaactaaaaggaccaaacgtggtatttggcct 39701541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30576213 - 30576136
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||||| ||| |||||||||||||||| |||||||||||| |||||| ||||||| ||||||||||||||    
T  30576213 taattgaaactttcaaaatttaaaggactaacttgggaattctgtcaagctaaaaagaccaaaagtgatatttggcct 30576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8713907 - 8713835
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||    
T  8713907 taattgaaacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggaccaaaagtggtattt 8713835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 45017808 - 45017732
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||  |||||||||    
T  45017808 taattgaaactttcgaaacttaaaggactaacttgggaattctatcaaactaaaaggaccaaaagtagtatttggcc 45017732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 29794335 - 29794406
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||  |||||||||||||    
T  29794335 aaactttcgaaatttaaaggactaacttgggaattctgtcaaactaaaatgaccaaaaatgatatttggcct 29794406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 31169570 - 31169628
Alignment:
Q  16 aaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  31169570 aaacttaaaggactaacttgagaattttgtcaaactaaaatgaccaaacgtgatatttg 31169628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36359962 - 36359901
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaa 62  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  36359962 taattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggaccaa 36359901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 13771881 - 13771957
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggccttt 80  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||  || ||||||||||||    
T  13771881 ttgaaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaaatgaccaaaaatggtatttggccttt 13771957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 16197090 - 16197014
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||| ||||||| ||  |||||||||    
T  16197090 taattgaaactttcgaaacttaatggactaacttgataattctgtcaaacgaaaaggaccaaaagtagtatttggcc 16197014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 41190342 - 41190421
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctttt 81  Q
    ||||||||| |||||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||||    
T  41190342 taattgaaattttcgaaatttaaagaactaatttgagaattctgtcaaactaaaa-gaccaaacgtgctatttagcctttt 41190421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9277055 - 9277129
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggc 76  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || | |||||| ||||||||    
T  9277055 taattgaaactttcgaaacttaaaagactaacttgggaattctgtcaaactaaaatgatc-aacgtggtatttggc 9277129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23553416 - 23553338
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||||||| || ||||| || |||||| ||||    
T  23553416 taattgaaactttcgaaacttaaaggatcaagttgagaattctgtcaaactaaaaggatcaaacatggtatttgacctt 23553338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 36360149 - 36360223
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||||||||| |||||||  || ||||||||||    
T  36360149 ttgaaactttcgaaacttaaaagactaacttggaaattctgtcaaactaaaatgaccaaaattggtatttggcct 36360223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36314718 - 36314791
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||||||||||| ||||| ||||||||||| |||| ||||||||||||| ||||||| ||| ||||||    
T  36314718 taattgaaactttcgaaatttaaaagactaacttgataattttgtcaaactaaaaggaccaaaagtggtatttg 36314791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 40552823 - 40552750
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||||| ||||||| ||||||    
T  40552823 taattgaaactttcaaaatttaaatgattaacttgaaaattctgtcaaactaaaacgacgaaacgtggtatttg 40552750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4613801 - 4613729
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    |||||||||||||| ||| |||||||| |||||||| |||||| ||||||||||| ||||||| |||||||||    
T  4613801 taattgaaactttcaaaatttaaaggattaacttgaaaattctttcaaactaaaaggaccaaatgtgatattt 4613729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 25737162 - 25737090
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggc 76  Q
    |||||||||| |||||||||||||||||||||| |||| ||||||||||||| |||||||  || ||||||||    
T  25737162 ttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggaccaaatatggtatttggc 25737090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 29030189 - 29030269
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctttt 81  Q
    ||||||||||||||||||||||||||| |||||   ||||| ||||||||||||| ||||||| ||| |||||| ||||||    
T  29030189 taattgaaactttcgaaacttaaaggaataactaaggaattatgtcaaactaaaatgaccaaaagtggtatttgacctttt 29030269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9276544 - 9276466
Alignment:
Q  1 taattgaaactttcgaaacttaaagga-ctaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||||| ||||||||| || |||  ||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  9276544 taattgaaactttcaaaacttaaaagaactattttgagaattttgtcaaactaaaaggaccaaaagtgatatttggcct 9276466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14871419 - 14871481
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||| ||| |||||||    
T  14871419 taattgaaactttcgaaacttaaaagactaacttaggaattctgtcaaacttaaaggaccaaa 14871481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44041359 - 44041413
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  44041359 taattgaaactttcaaaacttaaaggactaacttgaaaattttgtcaaactaaaa 44041413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29792589 - 29792666
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||| ||| |||  || ||||||||||    
T  29792589 taatagaaactttcgaaatttaaaggactaatttgggaattctgtcaaactaaaaggactaaaaatggtatttggcct 29792666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 30576677 - 30576730
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  30576677 aaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacc 30576730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30576731 - 30576796
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgt 66  Q
    ||||||||||||| |||||||| | ||||||||||| |||||||||||||||||| || |||||||    
T  30576731 taattgaaacttttgaaacttagaagactaacttgaaaattctgtcaaactaaaaggatcaaacgt 30576796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 23179094 - 23179046
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  23179094 gaaacttaaaggactaacttgggaattctgtcaaactaaaaggaccaaa 23179046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 25730137 - 25730193
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||||| ||||    
T  25730137 ttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaatgacc 25730193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 25737623 - 25737679
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||||| ||||    
T  25737623 ttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaagacc 25737679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 45017990 - 45018062
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||| ||||||||||||||||||||||||||||||  ||| ||||||||||||| ||| ||| ||| |||||    
T  45017990 taattaaaactttcgaaacttaaaggactaacttgaagattttgtcaaactaaaaggactaaaagtggtattt 45018062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 9770800 - 9770851
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||| |||||||||||||||| |||||||||||||||||||    
T  9770800 ttgaaacttttgaaaattaaaggactaacttgggaattctgtcaaactaaaa 9770851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 36360019 - 36359968
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||||||||    
T  36360019 ttgaaacttttaaaacttaaaggactaacttgggaattctgtcaaactaaaa 36359968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39700946 - 39700887
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||||||  ||||||||||||||||||| |||||| ||||||||||||| ||||    
T  39700946 taattgaaacttttaaaacttaaaggactaacttaagaattttgtcaaactaaaaggacc 39700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 16208776 - 16208834
Alignment:
Q  16 aaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||| ||||||||||||||||||||||||||||| || ||| |||| ||||||    
T  16208776 aaacttaaagaactaacttgagaattctgtcaaactaaaaagatcaatcgtggtatttg 16208834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23553939 - 23553993
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||||||||||||    
T  23553939 taattaaaacattcgaaacttaaaagactaactttagaattctgtcaaactaaaa 23553993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43422919 - 43422865
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||| |||||||||||||||| ||||||||| | |||||||||||    
T  43422919 taattgaaactttcaaaacttaaaggactaatttgagaattatatcaaactaaaa 43422865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43423163 - 43423225
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    ||||||||||||||||||||||||  ||||||||  ||||| ||||||||||||| |||||||    
T  43423163 taattgaaactttcgaaacttaaataactaacttaggaattatgtcaaactaaaaggaccaaa 43423225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 5359087 - 5359148
Alignment:
Q  16 aaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    |||||||||||| ||| |||| |||||||||||||||||  || ||||||||||||||||||    
T  5359087 aaacttaaaggattaatttgataattctgtcaaactaaatagatcaaacgtgatatttggcc 5359148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9770622 - 9770545
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||||||||||||||| || ||||||| |||||||||||| ||| || || |||| ||| ||| ||||||    
T  9770622 taattgaaactttcgaaacttaaatgattaacttgggaattctgtcaatctacaaggagcaaaagtggtatctggcct 9770545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 5358698 - 5358650
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  5358698 aaacttttgaaacttgaaggactaacttgaaaattctgtcaaactaaaa 5358650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 9770730 - 9770674
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||| ||| ||||||||||||||||||||  ||||||||||||||||||| ||||    
T  9770730 ttgaaatttttgaaacttaaaggactaacttcggaattctgtcaaactaaaaggacc 9770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 40553264 - 40553312
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    |||||||||| || ||||||||||||||||||||||||||| |||||||    
T  40553264 gaaacttaaatgattaacttgagaattctgtcaaactaaaaggaccaaa 40553312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 4613858 - 4613807
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||||||||||| || |||| |||||||||||||    
T  4613858 ttgaaacttttgaaacttaaaggactaactcgaaaattttgtcaaactaaaa 4613807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 9276998 - 9277049
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||||||||||||||  |||||| |||||||||||    
T  9276998 ttgaaacttttgaaacttaaaggactaacttggaaattctatcaaactaaaa 9277049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 13771476 - 13771425
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||  ||||||||| ||||||||||| ||||||||||||||||||    
T  13771476 ttgaaacttttaaaacttaaatgactaacttgaaaattctgtcaaactaaaa 13771425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 25730198 - 25730249
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||| ||||||||||||||||||||  |||||| |||||||||||    
T  25730198 ttgaaactttcaaaacttaaaggactaacttggaaattctatcaaactaaaa 25730249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 25737684 - 25737735
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||| ||||||||||||||||||||  |||||| |||||||||||    
T  25737684 ttgaaactttcaaaacttaaaggactaacttggaaattctatcaaactaaaa 25737735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 34686915 - 34686982
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||  ||| ||||||||||||||||| |||||||||||| ||||| ||||| | ||||||||||    
T  34686915 aaacttttaaaatttaaaggactaacttgataattctgtcaaattaaaaggaccataagtgatatttg 34686982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 35434344 - 35434403
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    |||||||||| ||||||||||||| ||||||  ||||| ||||||||||||| |||||||    
T  35434344 ttgaaacttttgaaacttaaaggattaacttaggaattatgtcaaactaaaaggaccaaa 35434403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 11113610 - 11113536
Alignment:
Q  3 attgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    |||||||||||| ||| |||||||||||||||  ||||| ||||||||||||| || | || ||| |||||||||    
T  11113610 attgaaactttcaaaatttaaaggactaacttaggaattatgtcaaactaaaaggatctaaagtggtatttggcc 11113536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6236300 - 6236373
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||||||||| | ||||||||||| | ||||||| ||||| ||| ||||||||| |||| || ||||||||||    
T  6236300 taattgaaactattgaaacttaaagaaataacttgggaattttgtaaaactaaaaggaccgaaagtgatatttg 6236373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 11113658 - 11113613
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||    
T  11113658 gaaacttaaaggactaacttggaaattctgtcaaactaaaaggacc 11113613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 8714428 - 8714488
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaac 64  Q
    |||||||||| ||| |||||||||||||||||  |||||| ||||||||||| || |||||    
T  8714428 ttgaaacttttgaatcttaaaggactaacttggaaattctatcaaactaaaaggatcaaac 8714488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 9276601 - 9276553
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaacta 52  Q
    ||||||||||  ||||||||  |||||||||||||||||||||||||||    
T  9276601 ttgaaacttttaaaacttaactgactaacttgagaattctgtcaaacta 9276553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 9770668 - 9770628
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||||||||||| |||||||||||    
T  9770668 gaaacttaaatgactaacttgagaattctctcaaactaaaa 9770628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 23553473 - 23553417
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||| ||||| ||| |||||||||||| ||||||||||||| ||||    
T  23553473 ttgaaacttttgaaatttaaaagaccaacttgagaattttgtcaaactaaaaggacc 23553417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 29794272 - 29794328
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||| ||||||||||  |||| ||||||||||||| ||||    
T  29794272 ttgaaacttttgaaacttaaaagactaacttggaaattatgtcaaactaaaaggacc 29794328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 8713964 - 8713913
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||| ||| |||||||||| |||||||||| ||||| |||||||||||||    
T  8713964 ttgaaatttttgaaacttaaaagactaacttgtgaattttgtcaaactaaaa 8713913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 16197147 - 16197096
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||| ||||| |||||||||| || ||||||| |||||||||||||||||||    
T  16197147 ttgatacttttgaaacttaaatgattaacttgggaattctgtcaaactaaaa 16197096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 16208704 - 16208755
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||| ||||||||||||||| |||||| | |||||||||    
T  16208704 ttgaaacttttgaaactcaaaggactaacttgaaaattctataaaactaaaa 16208755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 23553882 - 23553933
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||| | | ||||||||||||||||| |||||||||||    
T  23553882 ttgaaacttttgaaacttgaggaactaacttgagaattctatcaaactaaaa 23553933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 31169499 - 31169550
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||  |||||||||||||||| |||||||||  ||||||||||||    
T  31169499 ttgaaacttttaaaacttaaaggactaatttgagaatttcgtcaaactaaaa 31169550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 36360089 - 36360140
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||||||||||||||  |||| ||||||| |||||    
T  36360089 ttgaaacttttgaaacttaaaggactaacttggcaattttgtcaaattaaaa 36360140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 39701003 - 39700952
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||||| ||||||  ||||| |||||||||||||    
T  39701003 ttgaaacttttgaaacttaaaggattaacttaggaattttgtcaaactaaaa 39700952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 43423107 - 43423158
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||||| ||| ||||||||||| | |||||||||    
T  43423107 ttgaaacttttgaaacttaaaggagtaaattgagaattctatgaaactaaaa 43423158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 25737221 - 25737171
Alignment:
Q  5 tgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||| |||| |||||||||||||||  |||||| ||||||||||||    
T  25737221 tgaaacttttgaaatttaaaggactaacttaggaattcggtcaaactaaaa 25737171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 40553311 - 40553369
Alignment:
Q  2 aattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||||| |||||||||| |||||||||   |||| ||||||||||||| ||||    
T  40553311 aattgaaacttttgaaacttaaaagactaacttagaaattttgtcaaactaaaaggacc 40553369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 43422976 - 43422939
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaatt 41  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  43422976 ttgaaacttttgaaacttaaaggactaacttgggaatt 43422939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 8714371 - 8714419
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| ||||||||||  ||||||||| ||||||| |||||||||||    
T  8714371 aaactttagaaacttaaaaaactaacttgcgaattctatcaaactaaaa 8714419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39700886 - 39700838
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaa 49  Q
    |||||||||||||| ||||||||| ||||||| | |||||| |||||||    
T  39700886 taattgaaactttcaaaacttaaaagactaacataagaattttgtcaaa 39700838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 40553372 - 40553432
Alignment:
Q  3 attgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    |||||||||||  ||||| |||||||||| ||  ||||| ||||||||||||| |||||||    
T  40553372 attgaaactttttaaactcaaaggactaagttaggaattatgtcaaactaaaaggaccaaa 40553432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 63; Significance: 1e-27; HSPs: 3)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 9935 - 10009
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttgg 75  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  9935 taattgaaactttcgaaacttaaagaactaacttgagaattctgtcaaactaaaaggacgaaacgtgatatttgg 10009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9456 - 9383
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| ||| |||  |||||||||    
T  9456 taattgaaacttccgaaacttaaatgactaacttaagaattctgtcaaactaaaaggacgaaaaatgatatttg 9383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 9502 - 9457
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||| ||||||||||||||||| | ||||||||| ||||    
T  9502 gaaacttaaagaactaacttgagaattctattaaactaaaaggacc 9457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 3e-25; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10862650 - 10862716
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtg 67  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10862650 taattgaaactttcaaaacttaaaggactaacttgagaattctgtcaaactaaaaggaccaaacgtg 10862716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16168527 - 16168449
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||| ||| |||||||||||    
T  16168527 taattgaaactttcaaaacttaaaggactaacgtgagaattctatcaaactaaaaggaccaaaagtggtatttggcctt 16168449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32417531 - 32417459
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||  ||||||||    
T  32417531 taattaaaactttcgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggaccaaaaatgatattt 32417459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32423372 - 32423300
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||  ||||||||    
T  32423372 taattaaaactttcgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggaccaaaaatgatattt 32423300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2839687 - 2839610
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||| ||||||| ||||||||| ||||    
T  2839687 taattgaaacttttgaaacttaaacgactaacttgagaattctttcaaattaaaaggaccaaaagtgatatttagcct 2839610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 2840119 - 2840192
Alignment:
Q  6 gaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    |||||||| |||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||| |||||    
T  2840119 gaaacttttgaaacttaaatgactaacttgagaattatgttaaactaaaaggaccaaacgtgatatttagcctt 2840192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9902327 - 9902406
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggccttt 80  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||  ||||||||| |||||    
T  9902327 taattaaaactttcgaaacttaaaagactaacttgaaaattctgtcaaactaaaagaaccaaaaatgatatttgaccttt 9902406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32417775 - 32417852
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||| ||||||||| || |||| ||| ||||||||||    
T  32417775 taattgaaactttcgaaagttaaagaactaacttgggaattctgtaaaactaaaaagatcaaaagtggtatttggcct 32417852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32423616 - 32423693
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||| ||||||||| || |||| ||| ||||||||||    
T  32423616 taattgaaactttcgaaagttaaagaactaacttgggaattctgtaaaactaaaaagatcaaaagtggtatttggcct 32423693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11527598 - 11527526
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||||||||||||||||||||||||||||||  ||||| ||||||| ||||| ||||||| ||| |||||    
T  11527598 taattgaaactttcgaaacttaaaggactaacttaggaattatgtcaaagtaaaaggaccaaaagtggtattt 11527526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 20575602 - 20575658
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  20575602 ttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggacc 20575658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 11528110 - 11528184
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||  ||||||||||||||||||||| ||||| |||||||| ||| ||||||||||  ||||||||||    
T  11528110 ttgaaactttttaaacttaaaggactaacttgaaaattcggtcaaacttaaaggaccaaacgttgtatttggcct 11528184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 20575468 - 20575398
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||| ||||||  ||| |||||||||    
T  20575468 aaactttcgaaacttaaaggactaacttggaaattctatcaaactaaaaggaccaatagtggtatttggcc 20575398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 20575715 - 20575785
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||  || |||||||||||    
T  20575715 aaactttcgaaacttaaaa-actaacttgagaattctgtcaaactaaaa-gaccaaaaatggtatttggcctt 20575785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16168753 - 16168826
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||||| ||||||||||| |||||| |||  |||||||||||||||||| || |||| ||| ||||||    
T  16168753 taattgaaacttgcgaaacttaaatgactaatttggaaattctgtcaaactaaaaagatcaaaagtggtatttg 16168826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 16168696 - 16168752
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| ||||| |||  |||||||||||||||||||||||||||||| ||||    
T  16168696 ttgaaacttttgaaacgtaatagactaacttgagaattctgtcaaactaaaaggacc 16168752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 17180144 - 17180195
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||  ||||||||||||||||||||| |||| |||||||||||||    
T  17180144 ttgaaacttttaaaacttaaaggactaacttgaaaattatgtcaaactaaaa 17180195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 24139570 - 24139644
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggc 76  Q
    ||||| ||||||||||||||||||||||||| ||| ||||| |||| |||||||| || ||||  |||||||||||    
T  24139570 taattaaaactttcgaaacttaaaggactaatttgtgaattatgtc-aactaaaaggatcaaaattgatatttggc 24139644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28630679 - 28630754
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggc 76  Q
    |||||||||||||| |||||||||  ||||||||  ||||| ||||||||||||| ||||||| ||| ||| ||||    
T  28630679 taattgaaactttcaaaacttaaaaaactaacttaggaattatgtcaaactaaaaggaccaaaagtggtatatggc 28630754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 2839733 - 2839688
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||||    
T  2839733 gaaatttaaaggactaacttgagaattctgtcaaattaaaaggacc 2839688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 11527644 - 11527599
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  11527644 gaaacttaaaggactaacttgtgaattttgtcaaactaaaaggacc 11527599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 16168573 - 16168528
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||    
T  16168573 gaaacttaaaggactaacttggaaattctgtcaaactaaaatgacc 16168528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 17132220 - 17132265
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaa 49  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||    
T  17132220 ttgaatcttttgaaacttaaaggattaacttgagaattctgtcaaa 17132265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 17131598 - 17131546
Alignment:
Q  26 gactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||| |||||| ||||| ||||| ||||||| ||||||||||||||    
T  17131598 gactaacttgaaaattctatcaaattaaaaggaccaaaagtgatatttggcct 17131546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 20575531 - 20575475
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||  ||||||||||||||||||||  |||||| ||||||||||| ||||    
T  20575531 ttgaaacttttaaaacttaaaggactaacttggaaattctatcaaactaaaaggacc 20575475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 32417585 - 32417537
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| |||||||||| ||||||||||| |||| |||||||||||||    
T  32417585 aaacttttgaaacttaaatgactaacttgaaaattttgtcaaactaaaa 32417537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 32423426 - 32423378
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| |||||||||| ||||||||||| |||| |||||||||||||    
T  32423426 aaacttttgaaacttaaatgactaacttgaaaattttgtcaaactaaaa 32423378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 24139513 - 24139564
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||| ||| |||||||||||||||||| ||| |||||| |||||||||||    
T  24139513 ttgaaatttttgaaacttaaaggactaacctgataattctatcaaactaaaa 24139564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 17179743 - 17179693
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaa 54  Q
    |||||| ||| |||| ||||||||||||||||| |||||| ||||||||||    
T  17179743 ttgaaatttttgaaatttaaaggactaacttgaaaattctatcaaactaaa 17179693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 17180201 - 17180278
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||| ||||||||||||||||||||| ||| || | |||| | | ||||||||| |||||||  || ||||||||||    
T  17180201 taattaaaactttcgaaacttaaaggattaatttaaaaattatataaaactaaaaggaccaaaaatggtatttggcct 17180278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 2840068 - 2840108
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| || ||||||||||||||||| |||||||||    
T  2840068 gaaacttaaatgattaacttgagaattctgttaaactaaaa 2840108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10962800 - 10962728
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||||||||||||||||| |  || ||||||  ||||| ||||||||||||| || || | |||||||||    
T  10962800 taattgaaactttcgaaactttacagaataactttggaattttgtcaaactaaaaagatcataagtgatattt 10962728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 32417637 - 32417597
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||| |||  ||||||||||||||||||    
T  32417637 gaaacttaaaggactaatttggaaattctgtcaaactaaaa 32417597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 32423478 - 32423438
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||| |||  ||||||||||||||||||    
T  32423478 gaaacttaaaggactaatttggaaattctgtcaaactaaaa 32423438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 3e-25; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 27893623 - 27893697
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttgg 75  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  27893623 taattgaaacttacgaaacttaaaggactaacttgagaattttgtcaaactaaaaggaccaaaagtgatatttgg 27893697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27893096 - 27893023
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||    
T  27893096 taattgaaactttcgaaatttaaaggattaacttgagaattctgtcaaactaaaaggaccaaacgtggtatttg 27893023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 30907135 - 30907061
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggc 76  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  30907135 taattgaaactttcgaaacttaaaagactaacttgagaattctgtcaaactaaaa-gaccaaaaatgatatttggc 30907061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 34336340 - 34336409
Alignment:
Q  5 tgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  34336340 tgaaactttcgaaatttaaaggactaatttgagaattctgtcaaactaaaaggaccaaaagtgatatttg 34336409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16781111 - 16781189
Alignment:
Q  1 taattgaaactttcgaaacttaaa-ggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  16781111 taattaaaactttcaaaacttaaaaggactaacttgagaattctgtcaaactaaaatgaccaaaagtgatatttagcct 16781189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31263986 - 31263908
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc-aaacgtgatatttggcct 78  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||||||||| |||| ||| ||||||||||||||    
T  31263986 taattgaaactttcgaaacttaaaggattaacttggaaattctgtcaaactaaaaagaccaaaaagtgatatttggcct 31263908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34429742 - 34429681
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaa 62  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  34429742 taattgaaattttcgaaatttaaaggactaacttgagaattctgtcaaactaaaaggaccaa 34429681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 31264043 - 31263987
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  31264043 ttgaaacttttgaaacttaaaggactaacttgagaattctgtcaaactaaaaggacc 31263987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8260446 - 8260392
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  8260446 taattgaaactttcgaaacttaaaggactaatttgagaattctgtaaaactaaaa 8260392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19081070 - 19081124
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  19081070 taattgaaactttcgaaacttaaaagactaatttgagaattctgtcaaactaaaa 19081124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37543142 - 37543219
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||  ||||||  || ||||||||||    
T  37543142 taattgaaactttcaaaacttaaaagactaacttgaaaattctgtcaaactaaaagaaccaaaaatggtatttggcct 37543219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 30907192 - 30907136
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  30907192 ttgaaacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggacc 30907136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 27893566 - 27893617
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  27893566 ttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaa 27893617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 21813253 - 21813191
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||| ||| ||| |||||||||    
T  21813253 gaaacttaaaggactaacttgagaattctatcaaactaaaaggactaaaagtggtatttggcc 21813191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36196566 - 36196641
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||||||||||||||||||||| |||| |||  ||||||||||||| ||||||| || |||||| ||||    
T  36196566 taattgaaactttcgaaacttaaaggactaatttgaaaat--tgtcaaactaaaaggaccaaaagtaatatttagcct 36196641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41265307 - 41265361
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  41265307 taattgaaactttcgaaacttaaatgactaacttgataattctctcaaactaaaa 41265361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31264221 - 31264296
Alignment:
Q  1 taattgaaactttcgaaacttaaaggac--taacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||||||||||||||||||||||| ||  |||||||  |||||||||||||||||| || |||| ||||||||||    
T  31264221 taattgaaactttcgaaacttaaagtactataacttggaaattctgtcaaactaaaaggatcaaaagtgatatttg 31264296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32341454 - 32341378
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    ||||| ||| |||||||| |||||||| |||||| ||||| ||||||||||||||  |||||| |||||||||||||    
T  32341454 taattcaaattttcgaaatttaaaggattaacttaagaatcctgtcaaactaaaagaaccaaaagtgatatttggcc 32341378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 34336150 - 34336102
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  34336150 aaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaa 34336102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 16781051 - 16781110
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||||| |||| |||||||||||||||| ||||| ||||||||||||| ||||    
T  16781051 taattgaaacttttgaaatttaaaggactaacttgtgaattttgtcaaactaaaaggacc 16781110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 30907319 - 30907366
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaact 51  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||    
T  30907319 ttgaaacttttgaaacttaaaggactaacttgagaattctttcaaact 30907366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 34336096 - 34336017
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggccttt 80  Q
    |||||||||||||| |||||||||||||||| |||| |||| | ||||||||||| || |||| ||| |||||| |||||    
T  34336096 taattgaaactttcaaaacttaaaggactaatttgaaaattttatcaaactaaaaggatcaaaagtggtatttgaccttt 34336017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 11871759 - 11871805
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaa 53  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||    
T  11871759 aaacttttgaaacttaaaggactaactcgagaattctgtcaaactaa 11871805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 30907377 - 30907455
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    |||||||||||||||||||||||| |||||||||   |||| ||||||||||||| ||  ||| ||| |||||||||||    
T  30907377 taattgaaactttcgaaacttaaatgactaacttataaattttgtcaaactaaaaggattaaaagtggtatttggcctt 30907455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 151717 - 151639
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggccttt 80  Q
    |||||||||||||||||||||||| ||| |||| | ||||| ||||||||||||| || |||| ||| ||||| ||||||    
T  151717 taattgaaactttcgaaacttaaatgaccaactag-gaattatgtcaaactaaaatgaacaaaagtggtattttgccttt 151639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 19080746 - 19080691
Alignment:
Q  5 tgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||| |||||||||| | ||||||||| |||||||||||||||||| ||||    
T  19080746 tgaaacttttgaaacttaaatgtctaacttgaaaattctgtcaaactaaaatgacc 19080691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 15 - 49
Target Start/End: Original strand, 41265261 - 41265295
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaa 49  Q
    |||||||||||||||||||||||||||||||||||    
T  41265261 gaaacttaaaggactaacttgagaattctgtcaaa 41265295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37543008 - 37542956
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaa 54  Q
    ||||| |||||||||||||||||| ||||||||||| | |||||||||||||||    
T  37543008 taattaaaactttcgaaacttaaaagactaacttga-agttctgtcaaactaaa 37542956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 39376232 - 39376159
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    ||||||||||| |||||| |||||| |||||||||||| ||| ||||||||| ||| |||  || |||||||||    
T  39376232 ttgaaactttcaaaacttgaaggaccaacttgagaattatgttaaactaaaatgacaaaaaatggtatttggcc 39376159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 20535970 - 20536010
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  20535970 gaaacttaaaagactaacttgagaattatgtcaaactaaaa 20536010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 27893142 - 27893102
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  27893142 gaaacttaaaggactaacttgggaatactgtcaaactaaaa 27893102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 36196509 - 36196565
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||| ||| ||||||||||  |||||||||||||||||| ||||    
T  36196509 ttgaaacttttgaaactcaaatgactaacttggaaattctgtcaaactaaaaagacc 36196565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11871813 - 11871876
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaac 64  Q
    ||||||||| |||| |||||||| |||||  ||||  |||||||||||||||||| ||||||||    
T  11871813 taattgaaagtttcaaaacttaacggactggcttggaaattctgtcaaactaaaaggaccaaac 11871876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 31264164 - 31264215
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||  |||||||||  ||||||||||||||||||    
T  31264164 ttgaaacttttgaaacttaaataactaacttggaaattctgtcaaactaaaa 31264215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15506015 - 15505961
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||  ||||||||||| ||| || | ||||||||||||||||||    
T  15506015 taattgaaactttcataacttaaaggagtaatttaaaaattctgtcaaactaaaa 15505961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 16780986 - 16780928
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    |||||||||||||||||||||| ||||||||| || ||||| || |||| ||| |||||    
T  16780986 gaaacttaaaggactaacttgaaaattctgtcgaattaaaaggatcaaaagtggtattt 16780928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19080690 - 19080628
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    |||||||||||||| |||||||||||| ||| |   |||||||||| |||||||| |||||||    
T  19080690 taattgaaactttcaaaacttaaaggattaattaaggaattctgtcgaactaaaatgaccaaa 19080628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 15506101 - 15506048
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||  |||||||||||| ||| ||||||||| ||||||||||||| ||||    
T  15506101 aaactttttaaacttaaaggattaatttgagaattatgtcaaactaaaaggacc 15506048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39301886 - 39301963
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||| |||||||  ||| ||||||||||||||| | |||||| ||||||||||| |||| ||| | |||||| ||||    
T  39301886 taattaaaacttttaaaatttaaaggactaacttaaaaattctatcaaactaaaaggaccgaacataatatttagcct 39301963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 42117215 - 42117271
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaa-ttctgtcaaactaaaacgaccaaa 63  Q
    ||||||| |||||||||||||||||||| |||| ||||| |||||||||| |||||||    
T  42117215 aaacttttgaaacttaaaggactaactt-agaatttctgacaaactaaaaggaccaaa 42117271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 37543054 - 37543014
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||||||||||  |||| |||||||||||||    
T  37543054 gaaacttaaaggactaacttggaaattatgtcaaactaaaa 37543014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 39376412 - 39376456
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaa 48  Q
    ||||||| || |||||||||||||||||||||  |||||||||||    
T  39376412 ttgaaacgtttgaaacttaaaggactaacttggaaattctgtcaa 39376456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 3e-25; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 11897904 - 11897826
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| |||||| ||||    
T  11897904 taattgaaactttcgaaacttaaatgactaacttgagaattctgtcaaactaaaatgaccaaaagtggtatttgacctt 11897826  T

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Target: chr1; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27351113 - 27351036
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||| ||||| ||||    
T  27351113 taattgaaactttcgaaacttaaaggactaacttgcgaattctgtcaaagtaaaaagaccaaacgtggtatttcgcct 27351036  T

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Target: chr1; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10685910 - 10685840
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatat 71  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  10685910 taattgaaacgttcgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggaccaaatgtgatat 10685840  T

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Target: chr1; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 10686782 - 10686848
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||    
T  10686782 aaactttcgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggaccaaaagtgatattt 10686848  T

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Target: chr1; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 39302753 - 39302827
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  39302753 ttgaaacttttaaaatttaaaggactaacttgagaattctgtcaaactaaaaggaccaaacgtggtatttggcct 39302827  T

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Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 8903284 - 8903358
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| ||  ||||||||||    
T  8903284 ttgaaactttcgaaacttaaaggattaacttgagaattatgtcaaactaaaaagaccaaaagtagtatttggcct 8903358  T

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Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 48352804 - 48352879
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggc 76  Q
    |||||||| ||||||||||||||| |||||||| | ||||||||||||||||||| ||||||| ||| ||||||||    
T  48352804 taattgaatctttcgaaacttaaaagactaactcgggaattctgtcaaactaaaaggaccaaaagtggtatttggc 48352879  T

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Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29419111 - 29419184
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||||||||||||||||||| || ||||||||||  |||| ||||||||||||| ||||||| ||||||||||    
T  29419111 taattgaaactttcgaaacttgaaagactaacttggaaattatgtcaaactaaaaggaccaaaagtgatatttg 29419184  T

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Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4030365 - 4030311
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  4030365 taattgaaactttcgaaacttaaaggattaacttaagaattttgtcaaactaaaa 4030311  T

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Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 44964136 - 44964213
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| || ||||  || |||||||||||    
T  44964136 taattgaaactttcgaaacttaaag-actaacttgagaattttgtctaactaaaaggatcaaaaatggtatttggcctt 44964213  T

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Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 34254555 - 34254482
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggccttt 80  Q
    ||||||| ||| |||||||||| |||||||||||||||||||||||||| || ||||| |  ||||||||||||    
T  34254555 aaacttttgaaccttaaaggaccaacttgagaattctgtcaaactaaaaggaacaaacattgtatttggccttt 34254482  T

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Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 44964019 - 44964075
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||  ||| |||||||||||||||||||||||||||||||||||| ||||    
T  44964019 ttgaaacttttaaaatttaaaggactaacttgagaattctgtcaaactaaaaggacc 44964075  T

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Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 49651017 - 49651057
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  49651017 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 49651057  T

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Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 27351170 - 27351119
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||| ||||| ||||||||||||||||||||||||||| |||||||||||||    
T  27351170 ttgatacttttgaaacttaaaggactaacttgagaattatgtcaaactaaaa 27351119  T

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Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 44964079 - 44964130
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||||||    
T  44964079 ttgaaacttttaaaacttaaaggaataacttgagaattctgtcaaactaaaa 44964130  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 49650635 - 49650581
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||| |||| ||| |||||||||||||||||||||| |||||||||||||    
T  49650635 taattgaaattttcaaaatttaaaggactaacttgagaattatgtcaaactaaaa 49650581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 4772219 - 4772155
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    |||||||||||||||| |||| ||||| ||||||||||||| |||| |||||| ||||| |||||    
T  4772219 gaaacttaaaggactaccttgtgaattttgtcaaactaaaaggacctaacgtggtattttgcctt 4772155  T

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Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 8902877 - 8902829
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  8902877 aaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaa 8902829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 17898853 - 17898909
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||||    
T  17898853 ttgaaacttttgaaacttaaaggactaatttgtgaattctatcaaactaaaaggacc 17898909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 27351597 - 27351677
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctttt 81  Q
    ||||| ||||||||||||||||||| |  |||||||||||| ||||||| ||||| ||||||| ||  |||||| ||||||    
T  27351597 taattaaaactttcgaaacttaaagtatcaacttgagaattatgtcaaattaaaaggaccaaaagttgtatttgacctttt 27351677  T

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Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 44963899 - 44963847
Alignment:
Q  3 attgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||||||||||||| |||| |||| ||| |||||||||||    
T  44963899 attgaaactttcgaaacttaaaggacttactttagaaatctatcaaactaaaa 44963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 1765933 - 1765984
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||| |||||||||||||| ||||| ||||||||||||||||    
T  1765933 ttgaaacttttgaagcttaaaggactaacatgagatttctgtcaaactaaaa 1765984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 34254618 - 34254567
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||||||| ||||  |||||||||||||||||||    
T  34254618 ttgaaacttttgaaacttaaaggactgacttaggaattctgtcaaactaaaa 34254567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 48352750 - 48352797
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaa 54  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  48352750 aaacttttgaaacttaaaggactaacttgggaattatgtcaaactaaa 48352797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1765990 - 1766044
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||| ||||||| |||| ||||| |||||||||||||||||||||||| |||||    
T  1765990 taatttaaacttttgaaatttaaaagactaacttgagaattctgtcaaattaaaa 1766044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 17898794 - 17898844
Alignment:
Q  5 tgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||| |||| |||||||||||| |||| ||||||||||||||||||    
T  17898794 tgaaacttttgaaatttaaaggactaatttgataattctgtcaaactaaaa 17898844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 49650674 - 49650636
Alignment:
Q  22 aaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  49650674 aaaggactaacttgagaattctgtcaaactaaaaggacc 49650636  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 4772653 - 4772698
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||    
T  4772653 gaaacttaaaggactaacttggaaattctgtcaaactaaaaggacc 4772698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17898910 - 17898983
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||||||| |||  |||||||||| ||||| ||||||||  ||||||||||||| ||||||| ||| ||||||    
T  17898910 taattgaaatttttaaaacttaaagaactaatttgagaatcatgtcaaactaaaaggaccaaaagtggtatttg 17898983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39302393 - 39302316
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||| |||||||| ||||||||||| | ||| ||| |||||||||||||||||||  | |||| ||| ||||||||||    
T  39302393 taatcgaaacttttgaaacttaaagaattaatttgtgaattctgtcaaactaaaagaaacaaaagtggtatttggcct 39302316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 10685956 - 10685916
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  10685956 gaaacttaaaggactaacttggaaattctgtcaaactaaaa 10685916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 27351551 - 27351595
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgac 59  Q
    ||||||||||||||||| ||||||||||| ||||| |||||||||    
T  27351551 gaaacttaaaggactaatttgagaattctatcaaaataaaacgac 27351595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 29419054 - 29419110
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||| |||||| ||  ||||||||||||||||||| ||||    
T  29419054 ttgaaacttttgaaacttaaaagactaattttggaattctgtcaaactaaaaggacc 29419110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 11897947 - 11897905
Alignment:
Q  18 acttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| ||||||| ||||||||||||||||||| ||||    
T  11897947 acttaaaggattaacttgggaattctgtcaaactaaaaggacc 11897905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 10686719 - 10686760
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgt 45  Q
    ||||||||||  ||||||||| ||||||||||||||||||||    
T  10686719 ttgaaacttttaaaacttaaatgactaacttgagaattctgt 10686760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 1765884 - 1765924
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||| |||||||  ||||||||||||||||||    
T  1765884 gaaacttaaaggagtaacttggaaattctgtcaaactaaaa 1765924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 2965547 - 2965499
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| ||||||||||||  |||||||| ||||| ||||||||||||    
T  2965547 aaacttttgaaacttaaaggtataacttgaaaattcggtcaaactaaaa 2965499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 44963955 - 44963907
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| ||||||||||||||||| ||| |||| || |||||||||||    
T  44963955 aaacttttgaaacttaaaggactaatttgggaatcctatcaaactaaaa 44963907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 1e-24; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 5805100 - 5805023
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||| ||||| ||||    
T  5805100 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaaggaccgaaagtggtatttagcct 5805023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 20366110 - 20366035
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||||    
T  20366110 taattgaaactttcgaaacttaaaggactaacttgagaattctgt-aaactaaaaggaccaaaaatgatatttggcc 20366035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 33879578 - 33879640
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  33879578 taattgaaactttcgaaacttaaaggactaacttgtgaattctgtcaaactaaaaggaccaaa 33879640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34951524 - 34951586
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  34951524 taattgaaactttcgaaacttaaaggactaacttgataattctgtcaaactaaaaagaccaaa 34951586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1346542 - 1346465
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || |||| |||| |||||||||    
T  1346542 taattgaaactttcgaaacttaaagcactaacttaagaattctgtcaaactaaaaggatcaaaagtgaaatttggcct 1346465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1441495 - 1441568
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| ||||||| ||||||||||    
T  1441495 taattgaaactttcgaaacctaaaggactaacttgggaattatgtcaaactaaaaggaccaaaagtgatatttg 1441568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36566340 - 36566267
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  36566340 taattgaaactttcaaaacttaaatgactaacttaagaattctgtcaaactaaaaggaccaaacgtggtatttg 36566267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 27995109 - 27995045
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27995109 gaaacttaaaacactaacttgagaattctgtcaaactaaaaggaccaaacgtgatatttggcctt 27995045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35215386 - 35215465
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggccttt 80  Q
    ||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||| || |||||||||||||| ||||||    
T  35215386 taattgaaattttcgaaatttaaaggactaacttgaaaattttgtcaaactaaaaggatcaaacgtgatatttcgccttt 35215465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8039725 - 8039647
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||| ||| ||| |||||| ||||    
T  8039725 taattgaaactttcgaaacttaaagaactaacttgagaattatgtcaaactaaaaggacaaaaagtggtatttgacctt 8039647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21433206 - 21433133
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| || |||| ||||||||||    
T  21433206 taattgaaacattcgaaacttaaaggactaacttgtgaattttgtcaaactaaaaggatcaaaagtgatatttg 21433133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23150701 - 23150624
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||| |||||||| |  ||||||||||    
T  23150701 taattgaaactttcaaaatttaaaggactaacttgagaattatgtcaaactaaaaggaccaaacatagtatttggcct 23150624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31893312 - 31893235
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||  || ||||||||||    
T  31893312 taattgaaactttcgaaacttaaaaaactaacttgagaattctgtcaaactaaaagaaccaaaaatggtatttggcct 31893235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 5559167 - 5559092
Alignment:
Q  4 ttgaaactttcgaaacttaaa-ggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||||| ||||| ||||||||||| ||||||||||    
T  5559167 ttgaaacttttgaaacttaaaaggactaacttgggaattctgtcaaattaaaaggaccaaacgtggtatttggcct 5559092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5559680 - 5559757
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    |||||||||||||  |||||||||||||||||||| ||||| ||||||||||||| ||||||| ||| |||||||||||    
T  5559680 taattgaaacttta-aaacttaaaggactaacttgggaattttgtcaaactaaaaggaccaaaagtggtatttggcctt 5559757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 21412928 - 21412851
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||||||||||| ||| |||  |||||||| ||||    
T  21412928 taattgaaactttcaaaacttaaaggattaacttaagaattctgtcaaactaaaaggactaaaaatgatatttcgcct 21412851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 33235096 - 33235024
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    |||||||||||||  ||| |||||||| ||||||||||||||||||||||||||| || |||| |||||||||    
T  33235096 taattgaaacttttaaaatttaaaggattaacttgagaattctgtcaaactaaaatgaacaaaagtgatattt 33235024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 19925343 - 19925394
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  19925343 ttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaa 19925394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 28256612 - 28256561
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  28256612 ttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaactaaaa 28256561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 1441065 - 1440991
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||| ||||||||||  ||||||||| ||||||||||||||||||| || |||| ||| ||||||||||    
T  1441065 ttgaaacttttgaaacttaaaatactaacttgggaattctgtcaaactaaaaggatcaaatgtggtatttggcct 1440991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 19925167 - 19925105
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    ||||||||||||||||||||| ||||| |||||||  |||||||||||||||||| |||||||    
T  19925167 taattgaaactttcgaaacttgaaggagtaacttggaaattctgtcaaactaaaaagaccaaa 19925105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31893538 - 31893616
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    |||||||||||||  |||||||||||||||||||   |||||||||||||||||| |||||||  ||||||||| ||||    
T  31893538 taattgaaacttttaaaacttaaaggactaacttagaaattctgtcaaactaaaaggaccaaaaatgatatttgacctt 31893616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 31893492 - 31893537
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  31893492 gaaacttaaaggactaacttgagaattctgtcaaactaaaaggacc 31893537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39958749 - 39958672
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||||||| ||||||| ||||||||| | |||| ||||||||||||| |||||||  |||||||| ||||    
T  39958749 taattgaaactttcgagacttaaatgactaacttaaaaattatgtcaaactaaaaggaccaaaaatgatatttagcct 39958672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 5075409 - 5075337
Alignment:
Q  2 aattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||||||||||  |||||||||||||||||||||||  |||||||||||||||  | ||||| |||||||||    
T  5075409 aattgaaacttttaaaacttaaaggactaacttgagagatctgtcaaactaaaagaatcaaacatgatatttg 5075337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 21412982 - 21412934
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  21412982 aaacttttgaaacttaaaggactaacttgaaaattctgtcaaactaaaa 21412934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 31175962 - 31176018
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||||||||||||||  |||||||||||||||||| ||||    
T  31175962 ttgaaacttttgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacc 31176018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 35214926 - 35214870
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||| ||| |||||||||| |||||||||||||||||||||||||||||| ||||    
T  35214926 ttgaaatttttgaaacttaaaagactaacttgagaattctgtcaaactaaaaggacc 35214870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 10619919 - 10619868
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||||||||||||||| |||| |||||||||||||    
T  10619919 ttgaaacttttgaaacttaaaggactaacttgacaattgtgtcaaactaaaa 10619868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 21433340 - 21433391
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  21433340 ttgaaacttttgaaacttaaaggattaacttgggaattctgtcaaactaaaa 21433391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 36566457 - 36566406
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||| |||||||||||||||||||||| |||||||||||||    
T  36566457 ttgaaacttttgaaatttaaaggactaacttgagaattttgtcaaactaaaa 36566406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 20366605 - 20366675
Alignment:
Q  6 gaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggc 76  Q
    |||||||| |||||||||||||||||||||  ||||||||  |||||||| ||||||| ||| ||||||||    
T  20366605 gaaacttttgaaacttaaaggactaacttggaaattctgtttaactaaaaggaccaaatgtggtatttggc 20366675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 40904753 - 40904691
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    |||||||||||||  ||||||||| |||||||||||||||| |||||||| |||| |||||||    
T  40904753 taattgaaacttttaaaacttaaaagactaacttgagaattatgtcaaaccaaaaggaccaaa 40904691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 5559634 - 5559679
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  5559634 gaaacttaaaggactaacttgggaattctgtcaaactaaaaggacc 5559679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 5805154 - 5805101
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||| ||||    
T  5805154 aaacttttgaaacttaaaggaatagcttgagaattctgtcaaactaaaaggacc 5805101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 1286489 - 1286433
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||| ||||||||| |||||||| ||||||||||| ||||    
T  1286489 ttgaaacttttgaaacttaaaagactaactttagaattctctcaaactaaaaggacc 1286433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4187568 - 4187496
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    |||||||||||||| |||||||||||| ||| ||  ||||||||||||||||||  ||| ||| |||||||||    
T  4187568 taattgaaactttctaaacttaaaggattaatttatgaattctgtcaaactaaactgacgaaaagtgatattt 4187496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5805656 - 5805731
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    |||||||||||||| ||||||||| ||||||||| | |||| ||||||||||||| ||||||| ||  |||||||||    
T  5805656 taattgaaactttcaaaacttaaatgactaactt-aaaattttgtcaaactaaaaggaccaaaggtagtatttggcc 5805731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19925400 - 19925472
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||| ||||||||| ||||||||||||||| ||| ||||| |||||||||||||  |||||| ||| |||||    
T  19925400 taattaaaactttcgcaacttaaaggactaagttgggaattttgtcaaactaaaagaaccaaaagtggtattt 19925472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 21413042 - 21412994
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  21413042 aaacttttgaaacttaaaagactaacttgagaattctgtgaaactaaaa 21412994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 22876870 - 22876910
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  22876870 gaaacttaaaggattaacttgagaattctgtcaaactaaaa 22876910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 23679539 - 23679586
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  23679539 aaacttttgaaacttaaag-actaacttgagaattctgtcaaactaaaa 23679586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 31893441 - 31893481
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  31893441 gaaacttaaaggactaacttgagaattttgtcaaactaaaa 31893481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 33235568 - 33235616
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    |||||||||||||||||||||| |||| ||||||||||||| |||||||    
T  33235568 gaaacttaaaggactaacttgataattttgtcaaactaaaaggaccaaa 33235616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 34951346 - 34951290
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||||||||||||| |||||| |||||||| |||| ||||    
T  34951346 ttgaaacttttgaaacttaaaggactaacttaagaattatgtcaaacgaaaaggacc 34951290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 1346599 - 1346548
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||||||||||||||  |||| |||||||||||||    
T  1346599 ttgaaacttttgaaacttaaaggactaacttggaaattatgtcaaactaaaa 1346548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 20366543 - 20366594
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||| ||||||||||||||| ||||| |||||||||||||    
T  20366543 ttgaaacttttgaaacctaaaggactaacttgcgaattttgtcaaactaaaa 20366594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 21433263 - 21433212
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||| |||||||||| ||||||| |||||||||||    
T  21433263 ttgaaacttttgaaacttaaatgactaacttgggaattctttcaaactaaaa 21433212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 27995180 - 27995129
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||||| |||||    
T  27995180 ttgatacttttgaaacttaaaggattaacttgagaattctgtcaaattaaaa 27995129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 39959259 - 39959330
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttgg 75  Q
    ||||||||||  ||| ||||| |||||| || | |||||||||||||||||| ||||||||||| |||||||    
T  39959259 ttgaaacttttcaaatttaaatgactaatttaaaaattctgtcaaactaaaaggaccaaacgtggtatttgg 39959330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20101884 - 20101831
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||    
T  20101884 taattgaaactttcgaaacttaaa-aactaacttgggaattcagtcaaactaaaa 20101831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 1286432 - 1286360
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||||||||| |||| |||||  ||||| |||| |||||| ||||||||||| ||| ||| |||||||||    
T  1286432 taattgaaacttttgaaatttaaaaaactaatttgaaaattctatcaaactaaaaggacgaaaagtgatattt 1286360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 28256954 - 28256998
Alignment:
Q  16 aaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||    
T  28256954 aaacttaaaggactaacttgaaaattttgtcaaactaaaatgacc 28256998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29591119 - 29591171
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaa 53  Q
    ||||| ||||||| |||||||||||||||||||||| |||| | |||||||||    
T  29591119 taattaaaacttttgaaacttaaaggactaacttgataattatatcaaactaa 29591171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 33235153 - 33235097
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||| ||||||| |||||||| |||||||||||||| |||| ||||    
T  33235153 ttgaaacttttgaaatttaaaggtctaacttgggaattctgtcaaaccaaaaggacc 33235097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 33879521 - 33879577
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| ||||||||||||| |||||||  |||||||||||| ||||| ||||    
T  33879521 ttgaaacttttgaaacttaaaggattaacttggaaattctgtcaaattaaaaggacc 33879577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 34951418 - 34951458
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  34951418 gaaacttaaatgactaacttgagaattgtgtcaaactaaaa 34951458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 4187625 - 4187574
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||| ||||||||| ||||| |||||||| ||||    
T  4187625 ttgaaacttttgaaacttaaagaactaacttgggaattatgtcaaacaaaaa 4187574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 5805599 - 5805650
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||| || |||||||| ||||| ||||||||||||    
T  5805599 ttgaaacttttgaaacttaaaagattaacttgaaaattcagtcaaactaaaa 5805650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10620288 - 10620358
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||||||||| | |   ||||||||||| ||||||| |||||| ||||| ||||||| ||||||||||    
T  10620288 taattgaaactttcgatatt---aggactaacttaagaattcagtcaaaataaaaggaccaaaagtgatatttg 10620358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 23150758 - 23150707
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||| ||||||  |||||||||||||||| |||||    
T  23150758 ttgaaacttttgaaacttaaaagactaatctgagaattctgtcaaattaaaa 23150707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 28256549 - 28256482
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||||| |||| |||||| | ||||||| ||||||||||||||||||| || ||||  |||||||||    
T  28256549 aaacttttgaaatttaaagaagtaacttgggaattctgtcaaactaaaaggatcaaatatgatatttg 28256482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 39959199 - 39959250
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||| || |||||||  ||||||||||||||||||    
T  39959199 ttgaaacttttgaaacttaaatgattaacttggaaattctgtcaaactaaaa 39959250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 27995588 - 27995654
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||| |||||||||||||||||||| | || | ||||| ||||||| |||||||  ||||||||    
T  27995588 aaacttttgaaacttaaaggactaacttaaaaaatatgtcatactaaaaagaccaaaaatgatattt 27995654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 36566529 - 36566587
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    |||||||||| ||||||||||  |||||||||||||||||  ||||||| ||| |||||    
T  36566529 gaaacttaaaagactaacttggaaattctgtcaaactaaagggaccaaaagtggtattt 36566587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 1441449 - 1441494
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||| ||||||| ||||||||||| ||||    
T  1441449 gaaacttaaaagactaacttgggaattctatcaaactaaaatgacc 1441494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 31893358 - 31893313
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||  ||||||||||||||||||| ||||    
T  31893358 gaaacttaaaagactaacttaggaattctgtcaaactaaaatgacc 31893313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 36566397 - 36566341
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaactt-gagaattctgtcaaactaaaacgacc 60  Q
    |||||| ||| ||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  36566397 ttgaaaattttgaaacttaaag-actaactttgagaattctgtcaaactaaaatgacc 36566341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 4187698 - 4187746
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||  ||| ||||||||||||||||| |||||||||||| |||||    
T  4187698 aaacttttaaaatttaaaggactaacttgaaaattctgtcaaattaaaa 4187746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 5559228 - 5559176
Alignment:
Q  4 ttgaaactttcgaaacttaaa-ggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||| ||||||||||| ||||| | |||||||||||    
T  5559228 ttgaaacttttgaaacttaaaaggactaacttgggaattttatcaaactaaaa 5559176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 6220384 - 6220431
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| ||||||||||| ||||||||||||||||| | |||||||||    
T  6220384 aaacttttgaaacttaaag-actaacttgagaattctatgaaactaaaa 6220431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 22876916 - 22876987
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||||||||||||||||||||  | |||||||  |||| ||||||||||||| || |||| ||| |||||    
T  22876916 taattgaaactttcgaaacttaaa-aattaacttggaaattatgtcaaactaaaaggatcaaaagtggtattt 22876987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 23679608 - 23679660
Alignment:
Q  26 gactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||| ||| ||||| | ||||||||||| ||||||||||| ||||||||||    
T  23679608 gactaatttgtgaattttatcaaactaaaaagaccaaacgtggtatttggcct 23679660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28256999 - 28257071
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||||| |||| |||||||||  |||||||| |||||| | ||||||||||| ||| ||| ||| |||||    
T  28256999 taattgaaattttcaaaacttaaaaaactaactttagaattatatcaaactaaaaggacaaaaagtggtattt 28257071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 34951289 - 34951218
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    |||||||||||||||||||||||| |||||  ||| ||||  ||||||||||||| || |||| ||| |||||    
T  34951289 taattgaaactttcgaaacttaaa-gactatgttgggaatattgtcaaactaaaaagatcaaaagtggtattt 34951218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 40904810 - 40904754
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||  ||||||||| |||||| |||| |||| ||||||||||||| ||||    
T  40904810 ttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggacc 40904754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 1e-24; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36418462 - 36418539
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  36418462 taattgaaacttttgaaacgtaaaggactaacttgagaattatgtcaaactaaaaagaccaaacgtcatatttggcct 36418539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 18951359 - 18951289
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| |||||||||    
T  18951359 aaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggaccaaatgtgttatttggcc 18951289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20728590 - 20728517
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||| ||||||    
T  20728590 taattgaatctttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaagaccaaaagtggtatttg 20728517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 35190474 - 35190546
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    |||||||||||||| |||||||||| | |||||||| |||||||||||| ||||| |||||||||||||||||    
T  35190474 taattgaaactttcaaaacttaaagaagtaacttgaaaattctgtcaaattaaaaggaccaaacgtgatattt 35190546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 36417948 - 36417894
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  36417948 taattgaaactttcgaaatttaaaggactaacttgagaattctgttaaactaaaa 36417894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 80
Target Start/End: Original strand, 31813958 - 31814023
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggccttt 80  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||||||||| |||||| |||||    
T  31813958 gaaacttaaatgactaacttgggaattctgtcaaactaaaaggaccaaacgtggtatttgaccttt 31814023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 13538531 - 13538455
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    ||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||| ||||||| ||| | |||||||    
T  13538531 taattgaaactttcgaaacgtaaaggactaacttaggaattatgtcaaactaaaaggaccaaaagtggtctttggcc 13538455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 26275563 - 26275494
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    |||||||||| ||||||||||| ||||||||   ||||||||||||||||||  ||||||||||||||||    
T  26275563 ttgaaacttttgaaacttaaagaactaacttagaaattctgtcaaactaaaagtaccaaacgtgatattt 26275494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 5734525 - 5734449
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    |||||||||||||| |||||||||| | |||||| | ||||| |||||| ||||| |||||||| ||||||||||||    
T  5734525 taattgaaactttcaaaacttaaagaagtaacttaaaaattcagtcaaattaaaaggaccaaacatgatatttggcc 5734449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 13543146 - 13543070
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    ||||||||||||||||||||||||| | ||||||  ||||| ||||||||||||| ||||||| ||| | |||||||    
T  13543146 taattgaaactttcgaaacttaaagaattaacttaggaattatgtcaaactaaaaggaccaaaagtggtctttggcc 13543070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 20728647 - 20728591
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||||||||| ||||    
T  20728647 ttgaaacttttaaaacttaaaggactaacttgagaattctgttaaactaaaaggacc 20728591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 32660378 - 32660322
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||||| ||||    
T  32660378 ttgaaacttttgaaacttaaaggactaacttaggaattctgtcaaactaaaatgacc 32660322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 36418405 - 36418461
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||||||||||||||| |||| ||||||||||||| ||||    
T  36418405 ttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggacc 36418461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 1722619 - 1722568
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  1722619 ttgaaacttttgaaacttaaaggattaacttgagaattatgtcaaactaaaa 1722568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 19278753 - 19278694
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||| ||||||||||||||| |||||||||||||||||||| || |||| ||||||||||    
T  19278753 gaaatttaaaggactaacttaagaattctgtcaaactaaaaggatcaaaagtgatatttg 19278694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 19279236 - 19279311
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    |||||||||| ||||||||||  |||||||| |||||| ||||||||||||| || ||| ||||||||||| ||||    
T  19279236 ttgaaacttttgaaacttaaaaaactaacttaagaattttgtcaaactaaaaggatcaatcgtgatatttgacctt 19279311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 32660318 - 32660267
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  32660318 ttgaaacttttgaaacttaaaggactaacttgagaattttgtaaaactaaaa 32660267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 35189969 - 35189903
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||| ||| ||||||||||    
T  35189969 aaactttcgaaacttaaag-actaacttgagaattctatcaaattaaaatgactaaaagtgatatttg 35189903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 35891266 - 35891317
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| |||||||||||||||||||||| |||| |||||||||||||    
T  35891266 ttgaaacttttgaaacttaaaggactaacttgaaaattatgtcaaactaaaa 35891317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 1722556 - 1722486
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    ||||||| |||| |||||||||||||||| ||||| ||| ||||||||| |||||||| || |||||||||    
T  1722556 aaacttttgaaaattaaaggactaacttgtgaattttgttaaactaaaaggaccaaacatggtatttggcc 1722486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30737802 - 30737748
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||| |||||    
T  30737802 taattgaaactttcgaaatttaaatgattaacttgagaattctgtcaaattaaaa 30737748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38405597 - 38405651
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||||||||||||||| || ||||||| ||||||||| |||||||||    
T  38405597 taattgaaactttcgaaacttaaatgattaacttgggaattctgtgaaactaaaa 38405651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5735042 - 5735115
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||| ||| |||||||| ||||| |||||||||||||||||  ||||||||||| ||||| | ||||||||||    
T  5735042 taattaaaattttcgaaatttaaatgactaacttgagaattcgatcaaactaaaaggaccataagtgatatttg 5735115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 20729116 - 20729169
Alignment:
Q  20 ttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||||||||||||| |||| | ||||||||||| |||||||||||||||||    
T  20729116 ttaaaggactaacttgataattttatcaaactaaaaggaccaaacgtgatattt 20729169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 6336262 - 6336206
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||||||||||||||  |||||| ||||||||||| ||||    
T  6336262 ttgaaacttttgaaacttaaaggactaacttggaaattctttcaaactaaaatgacc 6336206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 18249074 - 18249026
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  18249074 aaacttttgaaacttaaatgactaacttgagaattctgttaaactaaaa 18249026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 18951419 - 18951371
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||||    
T  18951419 aaacttttaaaacttaaaggactaacttgagaattctatcaaactaaaa 18951371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 30738264 - 30738320
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||| ||||| ||||    
T  30738264 ttgaaacttttgaaacataaaggacaaacttgagaattctgtcaaattaaaatgacc 30738320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 32459483 - 32459427
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    ||||||| |||||||||| |||||||||| ||||| ||||||||||||| |||||||    
T  32459483 aaacttttgaaacttaaatgactaacttgtgaattttgtcaaactaaaaggaccaaa 32459427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 5734986 - 5735036
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  5734986 ttgaaacttttgaa-cttaaaggactaacttgagaattctgttaaactaaaa 5735036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 20729049 - 20729100
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||  ||| ||||||||||||||||| ||||||||||||||||||    
T  20729049 ttgaaacttttaaaatttaaaggactaacttgaaaattctgtcaaactaaaa 20729100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 26276015 - 26276078
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||||||||||||  |||| ||||||||||||| || |||| ||| ||||||||||    
T  26276015 gaaacttaaaggactaacttggaaattttgtcaaactaaaaggatcaaaagtggtatttggcct 26276078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32660261 - 32660194
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtga 68  Q
    ||||||||||||||||||||||||||| ||||||   |||| ||| ||||||||| ||||||| ||||    
T  32660261 taattgaaactttcgaaacttaaaggattaacttagaaattatgtaaaactaaaaagaccaaaagtga 32660194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 14235614 - 14235552
Alignment:
Q  17 aacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    |||||||||||||||||| | |||| | ||||||||||| |||||||  ||||||||||||||    
T  14235614 aacttaaaggactaacttaaaaattatttcaaactaaaaggaccaaaaatgatatttggcctt 14235552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 14235669 - 14235631
Alignment:
Q  22 aaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  14235669 aaaggactaacttgagaattctgtcaaactaaaaggacc 14235631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 6336199 - 6336146
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||| |||||||||||||||||||||  ||||||| |||||||||| ||||    
T  6336199 aaacttttgaaacttaaaggactaacttggaaattctgccaaactaaaaggacc 6336146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 35190021 - 35189976
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||    
T  35190021 gaaacttaaaggactaacttgggagttctgtcaaactaaaatgacc 35189976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 30737856 - 30737808
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| |||||||||| |||||| ||||||||| |||||||||||||    
T  30737856 aaacttttgaaacttaaaagactaatttgagaattatgtcaaactaaaa 30737808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 36417994 - 36417954
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||||||||||||| |||||||| ||||    
T  36417994 gaaacttaaaggactaacttgagaattatgtcaaaccaaaa 36417954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 13543670 - 13543741
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||| |||| |||||  ||||| ||||||||||||||||||||||| ||  ||| ||| ||||||||||    
T  13543670 aaacttttgaaatttaaaaaactaatttgagaattctgtcaaactaaaaagagtaaaagtggtatttggcct 13543741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 40745021 - 40744963
Alignment:
Q  16 aaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||||||| || |||||||| |||||| ||||||||||| || |||| ||||||||||    
T  40745021 aaacttaaaagattaacttgaaaattctatcaaactaaaaggagcaaaagtgatatttg 40744963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 18249014 - 18248941
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggccttt 80  Q
    |||||||| |||| |||| || |||||| | |||||| ||||||||||| ||||||| ||| |||||| |||||    
T  18249014 aaactttcaaaacgtaaaagattaacttaaaaattctatcaaactaaaaggaccaaaagtggtatttgaccttt 18248941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 18237968 - 18237920
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||  |||||||||||| |||||| | ||||||||||||||||||    
T  18237968 aaacttttaaaacttaaaggattaacttaaaaattctgtcaaactaaaa 18237920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 19278812 - 19278772
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  19278812 gaaacttaaagaggtaacttgagaattctgtcaaactaaaa 19278772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 1e-24; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31247706 - 31247783
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| ||||| ||||||| ||||||||||||||    
T  31247706 taattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaattaaaaggaccaaaagtgatatttggcct 31247783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21377061 - 21377136
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggc 76  Q
    |||||||||||||||||| |||||| | |||||||  |||||||||||||||||| ||||||||||| ||||||||    
T  21377061 taattgaaactttcgaaatttaaagtattaacttggaaattctgtcaaactaaaaggaccaaacgtgttatttggc 21377136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 54456917 - 54456994
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||||| ||||| ||||||||||| |||||||||||||||| | ||||||||| ||||||| ||||||||| ||||    
T  54456917 taattgaagctttctaaacttaaagggctaacttgagaattctattaaactaaaaggaccaaaagtgatatttagcct 54456994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 14629333 - 14629270
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||||||||||| ||||||||||||| ||||| ||||||||||  ||||||||||    
T  14629333 gaaacttaaaggactaacttgggaattctgtcaaagtaaaaggaccaaacgtagtatttggcct 14629270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3088155 - 3088217
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    |||||||||||||||||| |||||| | |||||||| |||||||||||||||||| |||||||    
T  3088155 taattgaaactttcgaaatttaaagcattaacttgaaaattctgtcaaactaaaaggaccaaa 3088217  T

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Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 35555589 - 35555516
Alignment:
Q  1 taattgaaactttcgaaacttaaagga-ctaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||||||||| |||||||||| || |||||||| ||||||||||||  ||||| |||||||||||||||||    
T  35555589 taattgaaacttttgaaacttaaaagatctaacttgtgaattctgtcaatttaaaaggaccaaacgtgatattt 35555516  T

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Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 53783005 - 53782947
Alignment:
Q  22 aaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggccttt 80  Q
    |||||||||||||| |||||||| |||||||||| ||||||| ||| ||||||||||||    
T  53783005 aaaggactaacttgggaattctgccaaactaaaaggaccaaaagtgttatttggccttt 53782947  T

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Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4276197 - 4276124
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||||||| |||||||||| |||||||| | |||  ||||||||||||| ||||||| || |||||||    
T  4276197 taattgaaactttcaaaacttaaagaactaacttaaaaatattgtcaaactaaaaggaccaaaagtaatatttg 4276124  T

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Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 4276632 - 4276672
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  4276632 gaaacttaaaggactaacttgggaattctgtcaaactaaaa 4276672  T

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Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 31247649 - 31247705
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| ||||||||||| ||||||||| |||||||||| |||||||| ||||    
T  31247649 ttgaaacttttgaaacttaaagcactaacttgggaattctgtccaactaaaaggacc 31247705  T

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Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 31247245 - 31247195
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  31247245 ttgaaacttttgaaacttaaag-actaacttgagaattttgtcaaactaaaa 31247195  T

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Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 35555646 - 35555595
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||||||| ||| |||| |||||||||||| ||||||||||||||||||    
T  35555646 ttgaaactttcaaaatttaatggactaacttgataattctgtcaaactaaaa 35555595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 54456730 - 54456655
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    ||||||||||||||||||||| |||||| ||   |||||||||||||||||| || ||||  ||||||||| ||||    
T  54456730 ttgaaactttcgaaacttaaatgactaatttcgaaattctgtcaaactaaaaggatcaaaaatgatatttgacctt 54456655  T

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Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 24707523 - 24707457
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    |||||||  ||||||||||||||||||||  |||||||| ||||||||| ||| ||| |||||||||    
T  24707523 aaactttgaaaacttaaaggactaacttggaaattctgtaaaactaaaaggacaaaaagtgatattt 24707457  T

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Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 50530300 - 50530235
Alignment:
Q  9 actttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    ||||| |||||||||| |||||| |||| |||||||||||||||||| || ||||  |||||||||    
T  50530300 acttttgaaacttaaaagactaagttgaaaattctgtcaaactaaaaggatcaaaaatgatatttg 50530235  T

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Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 14964704 - 14964629
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcc 77  Q
    |||||||||||||| ||||||||| |||||||||| |||||  || ||||||||| || |||| ||||||| |||||    
T  14964704 taattgaaactttcaaaacttaaa-gactaacttgggaattaagttaaactaaaaggaacaaaagtgatatatggcc 14964629  T

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Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 14964781 - 14964741
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  14964781 gaaacttaaaagactaacttgaaaattctgtcaaactaaaa 14964741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 54456800 - 54456856
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||||||||||||||||||||  |||| ||||||| ||||| ||||    
T  54456800 ttgaaacttttgaaacttaaaggactaacttggaaattatgtcaaattaaaaggacc 54456856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 35555990 - 35556048
Alignment:
Q  15 gaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatattt 73  Q
    ||||||||||||| ||||||| ||||| || |||||||||| ||||||| ||| |||||    
T  35555990 gaaacttaaaggattaacttgggaattttgccaaactaaaaggaccaaaagtgctattt 35556048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 21376682 - 21376634
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    ||||||| |||||||||||||| ||| ||| |||||| |||||||||||    
T  21376682 aaacttttgaaacttaaaggaccaacctgaaaattctatcaaactaaaa 21376634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 8e-20; HSPs: 4)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 124419 - 124496
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||||||||||||||||||||||||||||||| ||||| | |||||| |||| ||||||| ||| ||||||||||    
T  124419 taattgaaactttcgaaacttaaaggactaacttgggaattatatcaaacaaaaaggaccaaaagtggtatttggcct 124496  T

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Target: scaffold0019; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 124359 - 124418
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  124359 taattgaaactttcgaaacttaaaggactaacttggaaattctgtcaaactaaaaggacc 124418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 124202 - 124132
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttg 74  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||| ||||||    
T  124202 ttgaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaaggaccaaaagtggtatttg 124132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 124261 - 124211
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaa 55  Q
    |||||||||| ||||||||||| ||||| ||| |||||||||||||||||||    
T  124261 ttgaaacttttgaaacttaaag-actaaattgggaattctgtcaaactaaaa 124211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 77 - 6
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||    
T  77 aaacttttgaaacttgaaggactaacttgagaattatgtcaaactaaaaggaccaaatgtgatatttagcct 6  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 597 - 658
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaa 62  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||| ||||| ||||||    
T  597 taattgaaactttcaaaacttaaaggactaacttgaaaattctatcaaattaaaaggaccaa 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 540 - 596
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| ||||| ||||    
T  540 ttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaaggacc 596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 3)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 28606 - 28545
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaa 62  Q
    |||||||||||||| ||||||||||||||||||||  |||||||||||| ||||| ||||||    
T  28606 taattgaaactttcaaaacttaaaggactaacttggaaattctgtcaaattaaaaggaccaa 28545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 28663 - 28607
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    |||||||||| |||  |||||||||||||||||||||||||||||| ||||| ||||    
T  28663 ttgaaacttttgaattttaaaggactaacttgagaattctgtcaaattaaaaggacc 28607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 29117 - 29178
Alignment:
Q  16 aaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcct 78  Q
    |||||| ||||||||||||  ||||| ||||||||||||| ||||||| ||||||||||||||    
T  29117 aaacttgaaggactaacttaggaattatgtcaaactaaaa-gaccaaatgtgatatttggcct 29178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 45265 - 45327
Alignment:
Q  1 taattgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaa 63  Q
    |||||||||||||  ||||||||| |||||||||||||||| |||||||| |||| |||||||    
T  45265 taattgaaacttttaaaacttaaaagactaacttgagaattatgtcaaaccaaaaggaccaaa 45327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 45208 - 45264
Alignment:
Q  4 ttgaaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgacc 60  Q
    ||||||||||  ||||||||| |||||| |||| |||| ||||||||||||| ||||    
T  45208 ttgaaacttttaaaacttaaatgactaatttgaaaattatgtcaaactaaaaggacc 45264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Complemental strand, 16128 - 16057
Alignment:
Q  8 aactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    |||||| |||||||||| ||||||||| |||||| ||| ||||||||| || |||| ||| |||||||||||    
T  16128 aacttttgaaacttaaaagactaacttaagaattttgtgaaactaaaatgatcaaaagtggtatttggcctt 16057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 16229 - 16157
Alignment:
Q  7 aaactttcgaaacttaaaggactaacttgagaattctgtcaaactaaaacgaccaaacgtgatatttggcctt 79  Q
    |||||||  |||||||||||||||| |||  |||| | ||||||||||| ||||||| | |||||||| ||||    
T  16229 aaactttttaaacttaaaggactaatttggaaattttatcaaactaaaaggaccaaaagagatatttgacctt 16157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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