View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7622_low_1 (Length: 598)

Name: NF7622_low_1
Description: NF7622
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7622_low_1
NF7622_low_1
[»] chr8 (29 HSPs)
chr8 (58-586)||(31017605-31018133)
chr8 (493-586)||(11358103-11358196)
chr8 (491-591)||(45068324-45068424)
chr8 (491-586)||(6464484-6464579)
chr8 (491-586)||(7311568-7311663)
chr8 (491-586)||(8013228-8013323)
chr8 (491-586)||(16710576-16710671)
chr8 (491-586)||(26250499-26250594)
chr8 (491-586)||(36005390-36005485)
chr8 (491-586)||(36021707-36021802)
chr8 (491-586)||(36076186-36076281)
chr8 (491-586)||(41242024-41242119)
chr8 (494-586)||(15012607-15012699)
chr8 (494-586)||(36425641-36425733)
chr8 (491-586)||(1238433-1238528)
chr8 (512-586)||(12768963-12769037)
chr8 (410-475)||(24239861-24239926)
chr8 (414-486)||(22314322-22314394)
chr8 (410-487)||(22366242-22366319)
chr8 (414-470)||(20175714-20175770)
chr8 (414-470)||(20220441-20220497)
chr8 (410-486)||(22723424-22723500)
chr8 (418-475)||(16002253-16002309)
chr8 (418-470)||(22497150-22497201)
chr8 (418-470)||(22888016-22888067)
chr8 (424-470)||(18041473-18041518)
chr8 (416-470)||(18118229-18118283)
chr8 (424-470)||(33172488-33172533)
chr8 (19-49)||(39513866-39513896)
[»] chr6 (32 HSPs)
chr6 (491-586)||(27670313-27670408)
chr6 (491-586)||(4186904-4186999)
chr6 (491-586)||(13671725-13671820)
chr6 (491-586)||(21262482-21262577)
chr6 (491-586)||(31548114-31548209)
chr6 (491-586)||(1428331-1428426)
chr6 (491-586)||(9864668-9864763)
chr6 (491-586)||(11058058-11058153)
chr6 (491-586)||(32328401-32328496)
chr6 (493-586)||(4020145-4020238)
chr6 (493-586)||(4026571-4026664)
chr6 (493-586)||(7062426-7062519)
chr6 (493-586)||(34649019-34649112)
chr6 (493-586)||(34655470-34655563)
chr6 (494-586)||(4738234-4738326)
chr6 (491-586)||(34711465-34711560)
chr6 (493-586)||(7069612-7069705)
chr6 (491-586)||(29907078-29907173)
chr6 (491-586)||(30117207-30117302)
chr6 (414-486)||(17374853-17374923)
chr6 (491-586)||(1167388-1167483)
chr6 (418-475)||(21931459-21931515)
chr6 (418-470)||(16136518-16136569)
chr6 (446-489)||(17856380-17856423)
chr6 (424-475)||(19175412-19175462)
chr6 (421-464)||(22585501-22585543)
chr6 (421-464)||(22590332-22590374)
chr6 (416-470)||(23222169-23222222)
chr6 (428-489)||(18733168-18733229)
chr6 (424-469)||(31467539-31467583)
chr6 (425-470)||(34967129-34967173)
chr6 (418-470)||(23223006-23223057)
[»] chr1 (30 HSPs)
chr1 (491-586)||(26621689-26621784)
chr1 (491-586)||(44916557-44916652)
chr1 (491-586)||(32797942-32798037)
chr1 (491-586)||(4599748-4599843)
chr1 (491-586)||(9869324-9869419)
chr1 (491-586)||(23762244-23762339)
chr1 (491-586)||(29001950-29002045)
chr1 (491-586)||(41299096-41299191)
chr1 (491-586)||(42092115-42092210)
chr1 (491-586)||(43686848-43686943)
chr1 (491-586)||(44241576-44241671)
chr1 (491-586)||(45016000-45016095)
chr1 (493-586)||(39053248-39053341)
chr1 (493-586)||(39059620-39059713)
chr1 (491-586)||(1174825-1174920)
chr1 (491-586)||(6238874-6238969)
chr1 (491-586)||(41297736-41297831)
chr1 (491-586)||(1115890-1115985)
chr1 (492-586)||(11913171-11913265)
chr1 (491-586)||(35085228-35085320)
chr1 (491-586)||(41305427-41305517)
chr1 (491-586)||(31072537-31072632)
chr1 (446-487)||(20822905-20822946)
chr1 (451-487)||(20836714-20836750)
chr1 (428-486)||(18852643-18852700)
chr1 (418-470)||(20194281-20194332)
chr1 (414-468)||(21978023-21978077)
chr1 (417-463)||(25094113-25094158)
chr1 (19-48)||(40246277-40246306)
chr1 (418-467)||(40436213-40436261)
[»] chr3 (27 HSPs)
chr3 (496-586)||(43931796-43931886)
chr3 (491-586)||(6036485-6036580)
chr3 (491-586)||(9570456-9570551)
chr3 (491-586)||(9576958-9577053)
chr3 (491-586)||(13015205-13015300)
chr3 (491-586)||(20651033-20651128)
chr3 (491-586)||(32746589-32746684)
chr3 (491-586)||(43995297-43995392)
chr3 (493-586)||(24179293-24179386)
chr3 (491-586)||(4311394-4311489)
chr3 (491-586)||(23068683-23068778)
chr3 (491-586)||(25893455-25893550)
chr3 (410-488)||(17758531-17758609)
chr3 (410-488)||(19059851-19059929)
chr3 (493-586)||(27501877-27501970)
chr3 (491-586)||(10941212-10941307)
chr3 (412-489)||(40038852-40038929)
chr3 (414-485)||(17393685-17393756)
chr3 (410-486)||(25103917-25103993)
chr3 (414-475)||(38375632-38375692)
chr3 (425-475)||(11515427-11515476)
chr3 (424-469)||(43427455-43427499)
chr3 (410-455)||(51961093-51961138)
chr3 (414-464)||(11402841-11402890)
chr3 (19-49)||(24909379-24909409)
chr3 (19-48)||(38344413-38344442)
chr3 (494-582)||(20952665-20952753)
[»] scaffold0343 (1 HSPs)
scaffold0343 (491-586)||(2864-2959)
[»] chr7 (38 HSPs)
chr7 (491-586)||(3924001-3924096)
chr7 (491-586)||(6020772-6020867)
chr7 (491-586)||(9642824-9642919)
chr7 (491-586)||(14287934-14288029)
chr7 (491-586)||(14299119-14299214)
chr7 (491-586)||(26602131-26602226)
chr7 (491-586)||(1379166-1379261)
chr7 (491-586)||(1948541-1948636)
chr7 (491-586)||(2446865-2446960)
chr7 (491-586)||(5049820-5049915)
chr7 (491-586)||(6795657-6795752)
chr7 (491-586)||(15914857-15914952)
chr7 (491-586)||(23612608-23612703)
chr7 (491-586)||(36875764-36875859)
chr7 (493-586)||(8185302-8185395)
chr7 (493-586)||(8192862-8192955)
chr7 (491-584)||(45433807-45433900)
chr7 (493-586)||(48347006-48347099)
chr7 (493-586)||(48353390-48353483)
chr7 (491-586)||(15949378-15949473)
chr7 (491-586)||(19090027-19090122)
chr7 (491-586)||(33850551-33850646)
chr7 (491-586)||(39433126-39433221)
chr7 (494-586)||(21642737-21642829)
chr7 (491-586)||(8142354-8142449)
chr7 (512-586)||(13774059-13774133)
chr7 (410-489)||(16383930-16384009)
chr7 (529-586)||(37026267-37026324)
chr7 (529-586)||(5056253-5056310)
chr7 (420-486)||(15977773-15977839)
chr7 (414-470)||(44304953-44305009)
chr7 (420-475)||(8563282-8563337)
chr7 (410-487)||(18079421-18079498)
chr7 (410-455)||(25124375-25124420)
chr7 (414-470)||(9723748-9723803)
chr7 (418-470)||(8267669-8267720)
chr7 (446-486)||(21537721-21537761)
chr7 (108-140)||(32194936-32194968)
[»] chr5 (21 HSPs)
chr5 (491-586)||(2439019-2439114)
chr5 (491-586)||(4973782-4973877)
chr5 (491-586)||(5876437-5876532)
chr5 (491-586)||(22360183-22360278)
chr5 (491-586)||(29980678-29980773)
chr5 (491-586)||(30041152-30041247)
chr5 (491-586)||(34357196-34357291)
chr5 (491-586)||(34358987-34359082)
chr5 (491-586)||(40958525-40958620)
chr5 (493-586)||(2958078-2958171)
chr5 (493-586)||(2966547-2966640)
chr5 (493-586)||(25894559-25894652)
chr5 (491-583)||(42151041-42151133)
chr5 (491-586)||(22314049-22314144)
chr5 (491-586)||(29414577-29414672)
chr5 (491-586)||(12505673-12505768)
chr5 (414-475)||(23417493-23417553)
chr5 (418-470)||(16835240-16835291)
chr5 (418-470)||(19874016-19874067)
chr5 (418-469)||(11763446-11763496)
chr5 (421-461)||(22662632-22662672)
[»] chr4 (23 HSPs)
chr4 (491-586)||(5660457-5660552)
chr4 (491-586)||(30211444-30211539)
chr4 (491-586)||(36754699-36754794)
chr4 (491-586)||(16405565-16405660)
chr4 (491-586)||(30238479-30238574)
chr4 (491-586)||(41373206-41373301)
chr4 (491-586)||(55462680-55462775)
chr4 (493-586)||(17457074-17457167)
chr4 (493-586)||(27590524-27590617)
chr4 (493-582)||(37368225-37368314)
chr4 (493-586)||(13594327-13594420)
chr4 (491-586)||(8104101-8104195)
chr4 (491-586)||(16838267-16838362)
chr4 (412-489)||(15213546-15213623)
chr4 (511-575)||(7780637-7780701)
chr4 (410-475)||(54363229-54363295)
chr4 (410-475)||(17375241-17375305)
chr4 (414-489)||(12133531-12133605)
chr4 (413-475)||(17373007-17373068)
chr4 (414-470)||(13590015-13590070)
chr4 (410-487)||(10237193-10237270)
chr4 (414-468)||(21417558-21417612)
chr4 (424-470)||(50219884-50219929)
[»] chr2 (23 HSPs)
chr2 (491-586)||(15852769-15852864)
chr2 (491-586)||(42931280-42931375)
chr2 (491-586)||(2157831-2157926)
chr2 (491-586)||(2164247-2164342)
chr2 (491-586)||(12951015-12951110)
chr2 (491-586)||(16817238-16817333)
chr2 (491-586)||(16856395-16856490)
chr2 (491-586)||(21331902-21331997)
chr2 (491-586)||(36782092-36782187)
chr2 (493-586)||(45012202-45012295)
chr2 (491-586)||(2021356-2021451)
chr2 (491-586)||(34834720-34834815)
chr2 (491-586)||(34841164-34841259)
chr2 (491-586)||(43268078-43268173)
chr2 (491-586)||(13901865-13901960)
chr2 (491-586)||(21067866-21067961)
chr2 (416-486)||(20279664-20279734)
chr2 (491-540)||(21341834-21341883)
chr2 (545-586)||(45700595-45700636)
chr2 (492-585)||(13163039-13163132)
chr2 (414-475)||(18537007-18537067)
chr2 (550-586)||(29485146-29485182)
chr2 (418-475)||(25595275-25595331)
[»] scaffold0510 (2 HSPs)
scaffold0510 (491-586)||(2468-2563)
scaffold0510 (491-586)||(8789-8884)
[»] scaffold0053 (1 HSPs)
scaffold0053 (491-586)||(49909-50004)
[»] scaffold0043 (1 HSPs)
scaffold0043 (491-586)||(4913-5008)
[»] scaffold0513 (1 HSPs)
scaffold0513 (491-586)||(12152-12247)
[»] scaffold0060 (1 HSPs)
scaffold0060 (491-586)||(15390-15485)
[»] scaffold0936 (1 HSPs)
scaffold0936 (491-586)||(3172-3267)
[»] scaffold0452 (1 HSPs)
scaffold0452 (410-489)||(2708-2787)
[»] scaffold1204 (1 HSPs)
scaffold1204 (412-489)||(13-90)
[»] scaffold0090 (1 HSPs)
scaffold0090 (414-486)||(34382-34454)
[»] scaffold0084 (2 HSPs)
scaffold0084 (414-486)||(55227-55299)
scaffold0084 (414-486)||(2934-3006)
[»] scaffold0032 (1 HSPs)
scaffold0032 (419-486)||(116099-116166)
[»] scaffold0317 (1 HSPs)
scaffold0317 (419-489)||(12524-12594)
[»] scaffold0047 (1 HSPs)
scaffold0047 (414-475)||(19870-19931)
[»] scaffold0049 (1 HSPs)
scaffold0049 (415-475)||(33349-33408)
[»] scaffold0017 (1 HSPs)
scaffold0017 (418-489)||(13021-13092)
[»] scaffold0022 (1 HSPs)
scaffold0022 (414-475)||(67893-67953)
[»] scaffold0013 (1 HSPs)
scaffold0013 (428-475)||(7014-7061)
[»] scaffold0014 (1 HSPs)
scaffold0014 (418-467)||(113969-114017)
[»] scaffold0601 (1 HSPs)
scaffold0601 (418-466)||(825-872)
[»] scaffold0561 (1 HSPs)
scaffold0561 (418-470)||(2713-2764)
[»] scaffold0009 (1 HSPs)
scaffold0009 (446-486)||(244774-244814)


Alignment Details
Target: chr8 (Bit Score: 460; Significance: 0; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 58 - 586
Target Start/End: Complemental strand, 31018133 - 31017605
Alignment:
Q  58 tagaggccttcatacctaataattaaagattctagaaagcaatacaatttagaacgtaaaaagggttcgaattgacatgtatatccttnnnnnnngacca 157  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||    
T  31018133 tagaggccgtcatacctaataattaaagattctagaaagcaatacaatttagaacgtaaaaagggttcgaattgacatgtatatccttaaaaaaagacca 31018034  T
Q  158 tggttttaagaaaaataatttgagaaattttgccatgaaaccctcaaaaaccactattgttgacggcagattgtaggccaaaagaatcgcgcctgaaccc 257  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31018033 tggttttaagaaaaataatttgagaaattttgccatgaaaccctcaaaaaccactattgttgacggcagattgtaggccaaaagaatcgcgcctgaaccc 31017934  T
Q  258 tgccaaaactacgttattctattgaagtgacgctaatgacgacattgctcccatgaaccttcacttactttgacatgtagttcatttagcagtgcgaata 357  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31017933 tgccagaactacgttattctattgaagtgacgctaatgacgacattgctcccatgaaccttcacttactttgacatgtagttcatttagcagtgcgaata 31017834  T
Q  358 tattggtacactaatatagtaacatgtatgtcagtccaatatttgaactaactcatcaattaagttcaaaataatcacttatttcaattaagcacttatg 457  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||    
T  31017833 tattggtacactaacatagtaacgtgtatgtcagtccaatatttgaactaactcgtcgattaagttcaaaataatcacttattttaattaagcacttatg 31017734  T
Q  458 catagaattagggtagaagctacaactaagagtttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacga 557  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  31017733 catagaattagggtagaagttacaactaagagttcgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacga 31017634  T
Q  558 ttgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| |||||||||||    
T  31017633 ttgaatgatacaattgaactcacaatatt 31017605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 11358103 - 11358196
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11358103 gagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 11358196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 491 - 591
Target Start/End: Original strand, 45068324 - 45068424
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatattcttc 590  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||    
T  45068324 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgaaacatcgactattgaatggtacaattgatctcacaatattgttc 45068423  T
Q  591 g 591  Q
    |    
T  45068424 g 45068424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 6464484 - 6464579
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6464484 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 6464579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 7311663 - 7311568
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  7311663 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 7311568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 8013228 - 8013323
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  8013228 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 8013323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 16710576 - 16710671
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  16710576 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 16710671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 26250499 - 26250594
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  26250499 ttgaaaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcaacgattgaatgatacaattgatttcacaatatt 26250594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 36005390 - 36005485
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36005390 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 36005485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 36021707 - 36021802
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36021707 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 36021802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 36076281 - 36076186
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36076281 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 36076186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 41242024 - 41242119
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  41242024 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 41242119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 494 - 586
Target Start/End: Complemental strand, 15012699 - 15012607
Alignment:
Q  494 agaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  15012699 agaaatcatcaattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgacttcacaatatt 15012607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 494 - 586
Target Start/End: Original strand, 36425641 - 36425733
Alignment:
Q  494 agaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36425641 agaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 36425733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 1238528 - 1238433
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||| ||| || |||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  1238528 ttgagaaatcatctattgaacgataagatcgactcttgaatcattcaatagtttgtgacatcgactattgaatgatacaattgatttcacaatatt 1238433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 512 - 586
Target Start/End: Complemental strand, 12769037 - 12768963
Alignment:
Q  512 gataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12769037 gataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 12768963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 410 - 475
Target Start/End: Original strand, 24239861 - 24239926
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24239861 tcattaattaaattcaaaataatcacttatttcaattaagcacttatgcatagaattagggaagaa 24239926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 414 - 486
Target Start/End: Original strand, 22314322 - 22314394
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||    
T  22314322 caattaagttcacaataatcacttatctcaaataagcacttatgcatagaattagggaaaaagctacaactaa 22314394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 410 - 487
Target Start/End: Original strand, 22366242 - 22366319
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaag 487  Q
    ||||||||||| |||| |||||||||||  | ||| |||||||||||||||| |||||||||||||||||||||||||    
T  22366242 tcatcaattaatttcataataatcactttatacaaataagcacttatgcatataattagggtagaagctacaactaag 22366319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 20175770 - 20175714
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  20175770 caattaagttcacaataatcacttatctcaaataagcacttatgcatagaattaggg 20175714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 20220497 - 20220441
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  20220497 caattaagttcacaataatcacttatctcaaataagcacttatgcatagaattaggg 20220441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 486
Target Start/End: Original strand, 22723424 - 22723500
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    ||||||||||| |||| |||||||||||  | ||| |||||||||||||||| |||||||||||||| |||||||||    
T  22723424 tcatcaattaatttcataataatcactttatacaaataagcacttatgcatataattagggtagaagatacaactaa 22723500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 475
Target Start/End: Original strand, 16002253 - 16002309
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||    
T  16002253 taagtgcaaaataatcacttatt-caaataagcacttatgcatagaatttgggaagaa 16002309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 22497201 - 22497150
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  22497201 taagtgcaaaataatcacttatt-caaataagcacttatgcatataattaggg 22497150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 22888016 - 22888067
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  22888016 taagtgcaaaataatcacttatt-caaataagcacttatgcataaaattaggg 22888067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 470
Target Start/End: Complemental strand, 18041518 - 18041473
Alignment:
Q  424 caaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  18041518 caaaataatcacttatt-caattaagcacttaagcatacaattaggg 18041473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 470
Target Start/End: Complemental strand, 18118283 - 18118229
Alignment:
Q  416 attaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    |||||||||| |||||||||||||||||| |||||| || | |||| ||||||||    
T  18118283 attaagttcacaataatcacttatttcaaataagcatttttacataaaattaggg 18118229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 470
Target Start/End: Original strand, 33172488 - 33172533
Alignment:
Q  424 caaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  33172488 caaaataatcacttatt-caattaagcacttaagcatacaattaggg 33172533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 39513896 - 39513866
Alignment:
Q  19 atattacagggggtaaatgcctattaaccct 49  Q
    |||||||||||||||||||||||||||||||    
T  39513896 atattacagggggtaaatgcctattaaccct 39513866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 1e-39; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 27670408 - 27670313
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27670408 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 27670313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 4186999 - 4186904
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  4186999 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcaacgattgaatgatacaattgatttcacaatatt 4186904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 13671725 - 13671820
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  13671725 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacagttgatttcacaatatt 13671820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 21262482 - 21262577
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21262482 ttgagaaatcatccattaaatgataagaccgactcttgaatcattcaaaagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 21262577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 31548209 - 31548114
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31548209 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 31548114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 1428331 - 1428426
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  1428331 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 1428426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 9864668 - 9864763
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  9864668 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgattgcacaatatt 9864763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 11058058 - 11058153
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  11058058 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 11058153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 32328401 - 32328496
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  32328401 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 32328496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 4020145 - 4020238
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4020145 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 4020238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 4026571 - 4026664
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4026571 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 4026664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 7062426 - 7062519
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7062426 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 7062519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Complemental strand, 34649112 - 34649019
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34649112 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 34649019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Complemental strand, 34655563 - 34655470
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34655563 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 34655470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 494 - 586
Target Start/End: Original strand, 4738234 - 4738326
Alignment:
Q  494 agaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4738234 agaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 4738326  T

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Target: chr6; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 34711465 - 34711560
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34711465 ttgagaaatcattgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 34711560  T

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Target: chr6; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 7069612 - 7069705
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7069612 gagaaatcatcgattggacgataagatcgactgttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 7069705  T

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Target: chr6; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 29907173 - 29907078
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||  ||| || ||||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  29907173 ttgagaaatcatttattgaacgataagaccgactcttgaatcattcaatagtttgagacatcgacgattaaataatacaattgatttcacaatatt 29907078  T

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Target: chr6; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 30117207 - 30117302
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||  ||| || ||||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  30117207 ttgagaaatcatttattgaacgataagaccgactcttgaatcattcaatagtttgagacatcgacgattaaataatacaattgatttcacaatatt 30117302  T

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Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 414 - 486
Target Start/End: Complemental strand, 17374923 - 17374853
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    |||||||||||| ||||  ||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  17374923 caattaagttcataata--cacttatctcaattaagcacttatgcatagaattagggaagaagctacaactaa 17374853  T

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Target: chr6; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 1167388 - 1167483
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||| |||||||||| |||||||||||||||  ||| || |||||||||||||||| |||||  || |||||||||||  ||||||||||    
T  1167388 ttgagaaatcgtcgattaaatcataagatcgactcttggatcgtttaatagtttgagacatcaacgataaaacgatacaattgaattcacaatatt 1167483  T

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Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 418 - 475
Target Start/End: Original strand, 21931459 - 21931515
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  21931459 taagtgcaaaataatcacttatt-caaataagcacttatgcatagaattagggaagaa 21931515  T

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Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 16136518 - 16136569
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  16136518 taagtgcaaaataatcacttatt-caaataagcacttatgcatagaattaggg 16136569  T

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Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 446 - 489
Target Start/End: Complemental strand, 17856423 - 17856380
Alignment:
Q  446 taagcacttatgcatagaattagggtagaagctacaactaagag 489  Q
    ||||||| ||||||||||||||| | ||||||||||||||||||    
T  17856423 taagcacgtatgcatagaattagagaagaagctacaactaagag 17856380  T

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Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 475
Target Start/End: Original strand, 19175412 - 19175462
Alignment:
Q  424 caaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||||| ||||    
T  19175412 caaaataatcactt-tttcaaataagcacatatgcatagaattagggaagaa 19175462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 464
Target Start/End: Complemental strand, 22585543 - 22585501
Alignment:
Q  421 gttcaaaataatcacttatttcaattaagcacttatgcatagaa 464  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  22585543 gttcaaaataatcacttatt-caaataagcacttatgcatagaa 22585501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 464
Target Start/End: Complemental strand, 22590374 - 22590332
Alignment:
Q  421 gttcaaaataatcacttatttcaattaagcacttatgcatagaa 464  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  22590374 gttcaaaataatcacttatt-caaataagcacttatgcatagaa 22590332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 470
Target Start/End: Original strand, 23222169 - 23222222
Alignment:
Q  416 attaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    |||||||  |||||||||||||||| ||||||| |||||||||||| ||||||||    
T  23222169 attaagtgtaaaataatcacttatt-caattaatcacttatgcatataattaggg 23222222  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 489
Target Start/End: Original strand, 18733168 - 18733229
Alignment:
Q  428 ataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 489  Q
    ||||||||||||   || |||||||||||||| |||||||| | ||||||||||| ||||||    
T  18733168 ataatcacttatccaaaataagcacttatgcaaagaattagagaagaagctacaagtaagag 18733229  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 469
Target Start/End: Complemental strand, 31467583 - 31467539
Alignment:
Q  424 caaaataatcacttatttcaattaagcacttatgcatagaattagg 469  Q
    ||||||||||||||||| |||||||||||||| ||||| |||||||    
T  31467583 caaaataatcacttatt-caattaagcacttaagcatacaattagg 31467539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 470
Target Start/End: Original strand, 34967129 - 34967173
Alignment:
Q  425 aaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||    
T  34967129 aaaataatcacttatt-caattaagcacttaagcatacaattaggg 34967173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 23223006 - 23223057
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||  |||||||    
T  23223006 taagtgcaaaataatcactta-ttcaaataagcacttatgcatatgattaggg 23223057  T

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Target: chr1 (Bit Score: 84; Significance: 1e-39; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 26621784 - 26621689
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26621784 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 26621689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 44916652 - 44916557
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44916652 ttgagaaatcatcgattaaatgataagaccgactcttggatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 44916557  T

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Target: chr1; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 32798037 - 32797942
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  32798037 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcaacgattgaatgatacaattgatttcacaatatt 32797942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 4599843 - 4599748
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  4599843 ttgagaaatcattgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacagtatt 4599748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 9869419 - 9869324
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  9869419 ttgagaaatcatcaattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgatgattgaatgatacaattgatttcacaatatt 9869324  T

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Target: chr1; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 23762244 - 23762339
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  23762244 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 23762339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 29002045 - 29001950
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  29002045 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 29001950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 41299096 - 41299191
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41299096 ttgagaaatcattgattagatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 41299191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 42092210 - 42092115
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  42092210 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 42092115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 43686943 - 43686848
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  43686943 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 43686848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 44241671 - 44241576
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  44241671 ttgagaaatcatcgattaaatgataagactgactcttgaatcattcaatagtttgacacatcgacgattgaatgatacaattgatttcacaatatt 44241576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 45016095 - 45016000
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  45016095 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 45016000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 39053248 - 39053341
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39053248 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 39053341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 39059620 - 39059713
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39059620 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 39059713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 1174920 - 1174825
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| |  ||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1174920 ttgagaaatcatcgattgagcgataagaccgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatctcacaatatt 1174825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 6238969 - 6238874
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6238969 ttgagaaatcatcgattgaacgataagatcgactcttgaatcgttcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 6238874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 41297831 - 41297736
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  41297831 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatagaattgatttcacaatatt 41297736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 1115890 - 1115985
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  1115890 ttgagaaatcatcgattgaacgataagaccgactcttgaatcattcaatagtttgagacattgacgatagaatgatacaattgatttcacaatatt 1115985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 492 - 586
Target Start/End: Original strand, 11913171 - 11913265
Alignment:
Q  492 tgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||| || |||||||||||||| ||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  11913171 tgagaaatcttcaattaaatgataagaccgactcttggatcattcaatagtttgaaacatcgacgattgaatgatacaattgatctcgcaatatt 11913265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 35085320 - 35085228
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35085320 ttgagaaatcatcgattaaatgatact---gactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 35085228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 41305427 - 41305517
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||| ||||      |||||||| |||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||    
T  41305427 ttgagaaatcatcgattagatgac-----cgactcttgaatcattcaatagtttgagacatcgacgttcgaatgatacaattgatttcacaatatt 41305517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 31072632 - 31072537
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||| ||||  ||||||||| |||||||| |||||||||||||||||||||||| |  ||| | | ||||||||||| ||||||||||    
T  31072632 ttgagaaatcattgattttatgataagaccgactcttgaatcattcaatagtttgagacatctattatttatttatacaattgatttcacaatatt 31072537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 446 - 487
Target Start/End: Original strand, 20822905 - 20822946
Alignment:
Q  446 taagcacttatgcatagaattagggtagaagctacaactaag 487  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  20822905 taagcacttatgcatagaattagggtggaagctacaactaag 20822946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 451 - 487
Target Start/End: Original strand, 20836714 - 20836750
Alignment:
Q  451 acttatgcatagaattagggtagaagctacaactaag 487  Q
    |||||||||||||||||||||||||||||||||||||    
T  20836714 acttatgcatagaattagggtagaagctacaactaag 20836750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 486
Target Start/End: Complemental strand, 18852700 - 18852643
Alignment:
Q  428 ataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    ||||||||||||| ||| |||||||||||||||| | |||||| |||||||||||||||    
T  18852700 ataatcacttatt-caaataagcacttatgcatatatttagggaagaagctacaactaa 18852643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 20194281 - 20194332
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||| ||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  20194281 taagtgcaaaataatcatttatt-caaataagcacttatgcatagaattaggg 20194332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 468
Target Start/End: Original strand, 21978023 - 21978077
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattag 468  Q
    |||||||| ||| ||||||||||||| |||| |||||| |||||||| |||||||    
T  21978023 caattaagctcacaataatcacttatctcaaataagcatttatgcattgaattag 21978077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 463
Target Start/End: Original strand, 25094113 - 25094158
Alignment:
Q  417 ttaagttcaaaataatcacttatttcaattaagcacttatgcataga 463  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  25094113 ttaagtgcaaaataatcactta-ttcaaataagcacttatgcataga 25094158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 48
Target Start/End: Complemental strand, 40246306 - 40246277
Alignment:
Q  19 atattacagggggtaaatgcctattaaccc 48  Q
    ||||||||||||||||||||||||||||||    
T  40246306 atattacagggggtaaatgcctattaaccc 40246277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 467
Target Start/End: Complemental strand, 40436261 - 40436213
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaatta 467  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| |||||    
T  40436261 taagtgcaaaataatcacttatt-caaataagcacttatgcatataatta 40436213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 5e-39; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 496 - 586
Target Start/End: Complemental strand, 43931886 - 43931796
Alignment:
Q  496 aaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43931886 aaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 43931796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 6036580 - 6036485
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6036580 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 6036485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 9570456 - 9570551
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  9570456 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatataagtgatctcacaatatt 9570551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 9576958 - 9577053
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  9576958 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatataagtgatctcacaatatt 9577053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 13015300 - 13015205
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13015300 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 13015205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 20651033 - 20651128
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20651033 ttgagaaatcatcgattaaatgataaaaccgactcttggatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 20651128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 32746684 - 32746589
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32746684 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 32746589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 43995392 - 43995297
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43995392 ttgagaaatcatcgattaaatgataagaccgactcttggatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcataatatt 43995297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 493 - 586
Target Start/End: Complemental strand, 24179386 - 24179293
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24179386 gagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 24179293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 4311394 - 4311489
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  4311394 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 4311489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 23068778 - 23068683
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  23068778 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 23068683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 25893550 - 25893455
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  25893550 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgattgcacaatatt 25893455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 410 - 488
Target Start/End: Complemental strand, 17758609 - 17758531
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaaga 488  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17758609 tcatcaattaacttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaaga 17758531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 410 - 488
Target Start/End: Complemental strand, 19059929 - 19059851
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaaga 488  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19059929 tcatcaattaacttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaaga 19059851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 27501877 - 27501970
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27501877 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 27501970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 10941212 - 10941307
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  10941212 ttgagaaatcatcgattaaatgataagaccgactcttgaaatattcaatagtttgagacattgacgattgaatgatacaattgatttcacaatatt 10941307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 412 - 489
Target Start/End: Complemental strand, 40038929 - 40038852
Alignment:
Q  412 atcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 489  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40038929 atcaattaaattcaaaataatcatttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 40038852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 414 - 485
Target Start/End: Original strand, 17393685 - 17393756
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaacta 485  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  17393685 caattaagttcataataatcacttatctcaattaagcaattatgcatagaattagggaagaagctacaacta 17393756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 410 - 486
Target Start/End: Complemental strand, 25103993 - 25103917
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    ||||||||||| |||| |||||||||||  | ||| |||||||||||||||||||||||| ||||||||||||||||    
T  25103993 tcatcaattaatttcataataatcactttatacaaataagcacttatgcatagaattaggatagaagctacaactaa 25103917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 414 - 475
Target Start/End: Complemental strand, 38375692 - 38375632
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    ||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||    
T  38375692 caattaagtgcaaaataatcactcatt-caaataagcacttatgcatagaattagggaagaa 38375632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 425 - 475
Target Start/End: Complemental strand, 11515476 - 11515427
Alignment:
Q  425 aaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  11515476 aaaataatcacttatt-caaataagcacttatgcatagaattagggaagaa 11515427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 424 - 469
Target Start/End: Complemental strand, 43427499 - 43427455
Alignment:
Q  424 caaaataatcacttatttcaattaagcacttatgcatagaattagg 469  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||    
T  43427499 caaaataatcacttatt-caattaagcacttatgcatacaattagg 43427455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 410 - 455
Target Start/End: Complemental strand, 51961138 - 51961093
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcactta 455  Q
    ||||||||||| ||  ||||||||||||||||||||||||||||||    
T  51961138 tcatcaattaaatttgaaataatcacttatttcaattaagcactta 51961093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 464
Target Start/End: Original strand, 11402841 - 11402890
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaa 464  Q
    |||||||||||| |||||||||||| ||||| ||||||||| |||||||||    
T  11402841 caattaagttcacaataatcactta-ttcaaataagcacttgtgcatagaa 11402890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 49
Target Start/End: Complemental strand, 24909409 - 24909379
Alignment:
Q  19 atattacagggggtaaatgcctattaaccct 49  Q
    |||||||||||||||||||||||||||||||    
T  24909409 atattacagggggtaaatgcctattaaccct 24909379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 38344413 - 38344442
Alignment:
Q  19 atattacagggggtaaatgcctattaaccc 48  Q
    ||||||||||||||||||||||||||||||    
T  38344413 atattacagggggtaaatgcctattaaccc 38344442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 582
Target Start/End: Original strand, 20952665 - 20952753
Alignment:
Q  494 agaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaa 582  Q
    ||||||| ||||||||| |||| |||||||| ||  ||  || ||||||||| || ||| |||| ||||  ||||||||||||||||||    
T  20952665 agaaatcgtcgattaaacgatacgatcgactattggattgtttaatagtttgggaaatcaacgactgaacaatacaattgatctcacaa 20952753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 2959 - 2864
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2959 ttgagaaatcatcgatttaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 2864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 3e-37; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 3924001 - 3924096
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3924001 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 3924096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 6020772 - 6020867
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6020772 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 6020867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 9642824 - 9642919
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  9642824 ttgagaaatcatcgattgaatgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 9642919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 14288029 - 14287934
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14288029 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 14287934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 14299214 - 14299119
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14299214 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 14299119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 26602226 - 26602131
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26602226 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatctcacaatatt 26602131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 1379261 - 1379166
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  1379261 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 1379166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 1948541 - 1948636
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  1948541 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 1948636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 2446960 - 2446865
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  2446960 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 2446865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 5049820 - 5049915
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  5049820 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 5049915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 6795752 - 6795657
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6795752 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 6795657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 15914952 - 15914857
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  15914952 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 15914857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 23612703 - 23612608
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  23612703 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgatacatcgacgattgaatgatacaattgatttcacaatatt 23612608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 36875859 - 36875764
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  36875859 ttgagaaatcatcgattgaacaataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 36875764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 8185302 - 8185395
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8185302 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 8185395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 8192862 - 8192955
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8192862 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 8192955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 491 - 584
Target Start/End: Complemental strand, 45433900 - 45433807
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaata 584  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  45433900 ttgagaaatcattgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgactattgaatggtacaattgatctcacaata 45433807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 48347006 - 48347099
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48347006 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 48347099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 48353390 - 48353483
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48353390 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 48353483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 15949473 - 15949378
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||    
T  15949473 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcataatatt 15949378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 19090122 - 19090027
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||    
T  19090122 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgagtgatacaattgatttcacaatatt 19090027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 33850551 - 33850646
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  33850551 ttgagaaatcatcgattgaacgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgattttacaatatt 33850646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 39433221 - 39433126
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||    
T  39433221 ttgagaaatcatcgattaaatgaaaagaccgactcttgaatcattcaatagtttgagacatcgacgattgacagatacaattgatttcacaatatt 39433126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 494 - 586
Target Start/End: Complemental strand, 21642829 - 21642737
Alignment:
Q  494 agaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  21642829 agaaatcatcgattgtacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatataattgatttcacaatatt 21642737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 8142354 - 8142449
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  8142354 ttgagaaatcatcaattgaacgataagatcgactcttgaatcattcaatagtttgagacatcaaccattgaatgatacaattgatttcacaatatt 8142449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 512 - 586
Target Start/End: Original strand, 13774059 - 13774133
Alignment:
Q  512 gataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13774059 gataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 13774133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 410 - 489
Target Start/End: Original strand, 16383930 - 16384009
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 489  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  16383930 tcatcaattaaatataaaataatcacttatttcaattaagcacttacgcaaagaattagggtagaaactacaactaagag 16384009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 529 - 586
Target Start/End: Complemental strand, 37026324 - 37026267
Alignment:
Q  529 aatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37026324 aatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 37026267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 529 - 586
Target Start/End: Original strand, 5056253 - 5056310
Alignment:
Q  529 aatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  5056253 aatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 5056310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 420 - 486
Target Start/End: Complemental strand, 15977839 - 15977773
Alignment:
Q  420 agttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||||||| | |||||||||||||||    
T  15977839 agttcataataatcacttatctcaattaagcacttatgtatagaattagagaagaagctacaactaa 15977773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 44305009 - 44304953
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    |||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  44305009 caattaagttcacaataatcacttatctcaaataagcacttatgcatagaattaggg 44304953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 475
Target Start/End: Complemental strand, 8563337 - 8563282
Alignment:
Q  420 agttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  8563337 agttcacaataatcacttatatcaaataagcacttatgcatagaattagggaagaa 8563282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 410 - 487
Target Start/End: Complemental strand, 18079498 - 18079421
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaag 487  Q
    ||||||||||| |||| ||||||||| |  | ||| ||||||||||| ||| ||| ||||||||||||||||||||||    
T  18079498 tcatcaattaatttcataataatcaccttatccaagtaagcacttatacatggaactagggtagaagctacaactaag 18079421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 410 - 455
Target Start/End: Original strand, 25124375 - 25124420
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcactta 455  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  25124375 tcatcaattaaattcgaaataatcacttatttcaattaagcactta 25124420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 9723803 - 9723748
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  9723803 caattaagtgcaaaataatcacttatt-caaataagcacttatgcatataattaggg 9723748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 8267720 - 8267669
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  8267720 taagtgcaaaataatcacttatt-caaataagcacttatgcatacaattaggg 8267669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 446 - 486
Target Start/End: Complemental strand, 21537761 - 21537721
Alignment:
Q  446 taagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  21537761 taagcacttatgcatagaattggggaagaagctacaactaa 21537721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 32194968 - 32194936
Alignment:
Q  108 agaacgtaaaaagggttcgaattgacatgtata 140  Q
    ||||| |||||||||||||||||||||||||||    
T  32194968 agaacataaaaagggttcgaattgacatgtata 32194936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 3e-37; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 2439114 - 2439019
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||| ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2439114 ttgaaaaatcatcgattaaatgataagaccggctcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 2439019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 4973877 - 4973782
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4973877 ttgagaaatcatcgattagatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 4973782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 5876532 - 5876437
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  5876532 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 5876437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 22360278 - 22360183
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  22360278 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 22360183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 29980773 - 29980678
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  29980773 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 29980678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 30041152 - 30041247
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  30041152 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 30041247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 34357196 - 34357291
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34357196 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 34357291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 34358987 - 34359082
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34358987 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 34359082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 40958525 - 40958620
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  40958525 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatggtttgagacatcgacgattgaatgatacaattgatttcacaatatt 40958620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Complemental strand, 2958171 - 2958078
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2958171 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 2958078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Complemental strand, 2966640 - 2966547
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2966640 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 2966547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 25894559 - 25894652
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25894559 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 25894652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 491 - 583
Target Start/End: Complemental strand, 42151133 - 42151041
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaat 583  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  42151133 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaat 42151041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 22314144 - 22314049
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||| ||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  22314144 ttgagaaattatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 22314049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 29414577 - 29414672
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  29414577 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgataattgaatgatacaattgatttcacaatatt 29414672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 12505673 - 12505768
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| ||||||||  | ||||||||| |||||||||||||||||||||||||||||||||| | ||||||||    
T  12505673 ttgagaaatcatcgattaaatgataagaccgactcttggaccattcaatattttgagacatcgacgattgaatgatacaattgatattacaatatt 12505768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 414 - 475
Target Start/End: Original strand, 23417493 - 23417553
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  23417493 caattaagtgcaaaataatcacttatt-caaataagcacttatgcatagaattagggaagaa 23417553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 16835291 - 16835240
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  16835291 taagtgcaaaataatcacttatt-caaataagcacttatgcatataattaggg 16835240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 470
Target Start/End: Original strand, 19874016 - 19874067
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  19874016 taagtgcaaaataatcacttatt-caaataagcacttatgcatataattaggg 19874067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 469
Target Start/End: Complemental strand, 11763496 - 11763446
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattagg 469  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| |||||||    
T  11763496 taagtgcaaaataatcacttatt-caaataagcacttatgcatataattagg 11763446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 461
Target Start/End: Complemental strand, 22662672 - 22662632
Alignment:
Q  421 gttcaaaataatcacttatttcaattaagcacttatgcata 461  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  22662672 gttcacaataatcacttatttcaattaaacacttattcata 22662632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 3e-37; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 5660457 - 5660552
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5660457 ttgagaaatcatcgattaaatgataagactgactcttggatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 5660552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 30211444 - 30211539
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30211444 ttgagaaatcaccgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 30211539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 36754699 - 36754794
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36754699 ttgagaaatcatcgattgaatgataagaccgactcttggatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 36754794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 16405660 - 16405565
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  16405660 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacattgacaattgaatgatacaattgatttcacaatatt 16405565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 30238574 - 30238479
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||| ||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30238574 ttgagaaatcaacgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 30238479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 41373301 - 41373206
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  41373301 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 41373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 55462680 - 55462775
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  55462680 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcaacgattgaatgatacaattgatttcacaatatt 55462775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Complemental strand, 17457167 - 17457074
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17457167 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 17457074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Complemental strand, 27590617 - 27590524
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27590617 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 27590524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 582
Target Start/End: Original strand, 37368225 - 37368314
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaa 582  Q
    ||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37368225 gagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaa 37368314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 493 - 586
Target Start/End: Complemental strand, 13594420 - 13594327
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  13594420 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 13594327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 8104195 - 8104101
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  8104195 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaa-gatacaattgatttcacaatatt 8104101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 16838267 - 16838362
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  16838267 ttgagaaatcatcgattgaacgataagaccgactcttgaatcatttaatagtctgagacatcgacgattggatgatacaattgatttcacaatatt 16838362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 412 - 489
Target Start/End: Complemental strand, 15213623 - 15213546
Alignment:
Q  412 atcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 489  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  15213623 atcaattaaattcaaactaatcacttatttcaattaagcacttatgcaaagaattagggtagaaactacaactaagag 15213546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 511 - 575
Target Start/End: Complemental strand, 7780701 - 7780637
Alignment:
Q  511 tgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgat 575  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7780701 tgataagactgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgat 7780637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 54363295 - 54363229
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttc-aattaagcacttatgcatagaattagggtagaa 475  Q
    ||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||    
T  54363295 tcatcaattaaattcaaaataatcacttatttttaattaagcacttatgcatagaattagggaagaa 54363229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 410 - 475
Target Start/End: Complemental strand, 17375305 - 17375241
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    ||||||||||| |||||||||||||||||||||||||||  | |||||||||||||||||| ||||    
T  17375305 tcatcaattaaattcaaaataatcacttatttcaattaatta-ttatgcatagaattagggaagaa 17375241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 489
Target Start/End: Complemental strand, 12133605 - 12133531
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 489  Q
    ||||||||| || ||||||||||||| |||| ||||||||||||||| ||| ||||| ||||||||||||| ||||    
T  12133605 caattaagt-cacaataatcacttatctcaaataagcacttatgcattgaaatagggaagaagctacaacttagag 12133531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 413 - 475
Target Start/End: Complemental strand, 17373068 - 17373007
Alignment:
Q  413 tcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    |||||||| |||||||||||||||||||||||||||  | |||||||||||||||||| ||||    
T  17373068 tcaattaaattcaaaataatcacttatttcaattaatta-ttatgcatagaattagggaagaa 17373007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 470
Target Start/End: Complemental strand, 13590070 - 13590015
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||||| ||||||||    
T  13590070 caattaagtgcaaaataatcacttatt-caaataagcacttatgcatataattaggg 13590015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 410 - 487
Target Start/End: Complemental strand, 10237270 - 10237193
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaag 487  Q
    ||||||||||| |||| |||||||||||  | ||| |||||| |||| |||  |||||||||| ||||||||||||||    
T  10237270 tcatcaattaatttcataataatcactttatacaaataagcatttatacatgaaattagggtaaaagctacaactaag 10237193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 468
Target Start/End: Original strand, 21417558 - 21417612
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattag 468  Q
    |||||||| ||| |||||||||||||  ||| |||||||||||||| ||||||||    
T  21417558 caattaagctcacaataatcacttatcccaaataagcacttatgcaaagaattag 21417612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 470
Target Start/End: Complemental strand, 50219929 - 50219884
Alignment:
Q  424 caaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  50219929 caaaataatcacttatt-caattaagcacttaagcatacaattaggg 50219884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 15852864 - 15852769
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15852864 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 15852769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 42931280 - 42931375
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42931280 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 42931375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 2157926 - 2157831
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  2157926 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 2157831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 2164342 - 2164247
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  2164342 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 2164247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 12951110 - 12951015
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  12951110 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 12951015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 16817238 - 16817333
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  16817238 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 16817333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 16856395 - 16856490
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  16856395 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 16856490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 21331902 - 21331997
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  21331902 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaatagtttgagacatcaacgattgaatgacacaattgatttcacaatatt 21331997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 36782092 - 36782187
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  36782092 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 36782187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 493 - 586
Target Start/End: Complemental strand, 45012295 - 45012202
Alignment:
Q  493 gagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45012295 gagaaatcatcgattggacgataagatcgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 45012202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 2021356 - 2021451
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  2021356 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacattgacaattgaatgatacaattgatttcacaatatt 2021451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 34834720 - 34834815
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34834720 ttgagaaatcatcgattgaacgataagatcgactcttgaatcgttcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 34834815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 34841164 - 34841259
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34841164 ttgagaaatcatcgattgaacgataagatcgactcttgaatcgttcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 34841259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 43268173 - 43268078
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||| |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  43268173 ttgaaaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 43268078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 13901865 - 13901960
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||| ||| || |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  13901865 ttgagaaatcatcaattgaacgataagatcgactcttgaatcattcaatagtttgagacatcaaccattgaatgatacaattgatttcacaatatt 13901960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 21067866 - 21067961
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||| ||||| |||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  21067866 ttgagaaatcatcgattgaacgataagatcgtctcttgaatcattcaatagtttgagacatcaacaattgaatgatacaattgatttcacaatatt 21067961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 416 - 486
Target Start/End: Original strand, 20279664 - 20279734
Alignment:
Q  416 attaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    ||||||||||  ||||||||||||||||||||||||||| | |||| |||||||| |||||||||||||||    
T  20279664 attaagttcaccataatcacttatttcaattaagcacttttacatacaattagggaagaagctacaactaa 20279734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 491 - 540
Target Start/End: Original strand, 21341834 - 21341883
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaata 540  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  21341834 ttgagaaatcatcgattaaatgataagaccgactcttgaatcattcaata 21341883  T

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Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 545 - 586
Target Start/End: Complemental strand, 45700636 - 45700595
Alignment:
Q  545 gagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  45700636 gagacatagacgattgaatgatacaattgatctcacaatatt 45700595  T

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Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 492 - 585
Target Start/End: Complemental strand, 13163132 - 13163039
Alignment:
Q  492 tgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatat 585  Q
    ||||||||| ||||||||| |||| |||||| | ||  ||| || ||||||||| || ||| |||||| || |||||||||||| |||||||||    
T  13163132 tgagaaatcgtcgattaaacgatacgatcgaatgttggatcgtttaatagtttgggaaatcaacgattaaacgatacaattgatttcacaatat 13163039  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 475
Target Start/End: Original strand, 18537007 - 18537067
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    |||||||||  |||||||||||| ||| ||| ||||||||||||||||||||||||| ||||    
T  18537007 caattaagtgaaaaataatcactcatt-caaataagcacttatgcatagaattagggaagaa 18537067  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 550 - 586
Target Start/End: Complemental strand, 29485182 - 29485146
Alignment:
Q  550 atcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||| ||||||||||    
T  29485182 atcgacgattgaatgatacaattgatttcacaatatt 29485146  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 475
Target Start/End: Original strand, 25595275 - 25595331
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    ||||| ||||||||||||||| | ||  ||||||||||||||||||||||||| ||||    
T  25595275 taagtgcaaaataatcacttagt-cacataagcacttatgcatagaattagggaagaa 25595331  T

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Target: scaffold0510 (Bit Score: 76; Significance: 8e-35; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 2468 - 2563
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2468 ttgagaaatcattgattagatgataagaccgactcttgaatcattcaatagtttgagacatcgacgattgaatgatacaattgatttcacaatatt 2563  T

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Target: scaffold0510; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 8789 - 8884
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  8789 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatagaattgatttcacaatatt 8884  T

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Target: scaffold0053 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 50004 - 49909
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  50004 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 49909  T

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Target: scaffold0043 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 4913 - 5008
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  4913 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatacaattgatttcacaatatt 5008  T

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Target: scaffold0513 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 12247 - 12152
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||    
T  12247 ttgagaaatcatcgattgaacgataagatcgactcttgaatcattcaatagtttgagacatcgaccattgaatgatagaattgatttcacaatatt 12152  T

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Target: scaffold0060 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 491 - 586
Target Start/End: Complemental strand, 15485 - 15390
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  15485 ttgagaaatcatcgattaaatgataagaccgattcttgaatcattcaatagtgtgagacatcaacgattgaatgatacaattgatctcacattatt 15390  T

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Target: scaffold0936 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0936
Description:

Target: scaffold0936; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 491 - 586
Target Start/End: Original strand, 3172 - 3267
Alignment:
Q  491 ttgagaaatcatcgattaaatgataagatcgactctttaatcattcaatagtttgagacatcgacgattgaatgatacaattgatctcacaatatt 586  Q
    ||||||||||||||||| || | ||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  3172 ttgagaaatcatcgattgaacggtaagaccgactcttgaatcattcaatagtttgagacatcgacaattgaatgatacaattgatttcacaatatt 3267  T

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Target: scaffold0452 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 410 - 489
Target Start/End: Complemental strand, 2787 - 2708
Alignment:
Q  410 tcatcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 489  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  2787 tcatcaattaaattcaaaataatcacttatttcaattaagcacttatgcaaagaattagggtagaaactacaactaagag 2708  T

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Target: scaffold1204 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold1204
Description:

Target: scaffold1204; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 412 - 489
Target Start/End: Complemental strand, 90 - 13
Alignment:
Q  412 atcaattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 489  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  90 atcaattaaattcaaactaatcacttatttcaattaagcacttatgcaaagaattagggtagaaactacaactaagag 13  T

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Target: scaffold0090 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 486
Target Start/End: Complemental strand, 34454 - 34382
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||    
T  34454 caattaagttcacaataatcacttatctcaaataagcacttatgcatagaattagggaagaagctacaactaa 34382  T

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Target: scaffold0084 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 486
Target Start/End: Original strand, 55227 - 55299
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||| |||||||| |||||||||||||||    
T  55227 caattaagttcaaaataatcacttatctcaaataagcacttatgcataaaattagggaagaagctacaactaa 55299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 414 - 486
Target Start/End: Original strand, 2934 - 3006
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    |||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| | ||| |||||||||||    
T  2934 caattaagttcacaataatcacttatctcaaataagcacttatgcatagaattagcgaagacgctacaactaa 3006  T

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Target: scaffold0032 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 419 - 486
Target Start/End: Complemental strand, 116166 - 116099
Alignment:
Q  419 aagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    ||||||| ||||||||||||| |||| ||| ||||||||||||||||||||| |||||||||||||||    
T  116166 aagttcataataatcacttatctcaaataatcacttatgcatagaattagggaagaagctacaactaa 116099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 419 - 489
Target Start/End: Complemental strand, 12594 - 12524
Alignment:
Q  419 aagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 489  Q
    ||||||| ||||||||||||| |||| || |||||||||||||||||||||  ||||||||||||||||||    
T  12594 aagttcataataatcacttatctcaaatatgcacttatgcatagaattaggaaagaagctacaactaagag 12524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 414 - 475
Target Start/End: Complemental strand, 19931 - 19870
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    |||||||||||| ||||||||||||| |||| ||| ||||||||||||||||||||| ||||    
T  19931 caattaagttcacaataatcacttatctcaaataaacacttatgcatagaattagggaagaa 19870  T

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Target: scaffold0049 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 475
Target Start/End: Complemental strand, 33408 - 33349
Alignment:
Q  415 aattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    |||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||    
T  33408 aattaagtacaaaataatcactcatt-caaataagcacttatgcatagaattagggaagaa 33349  T

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Target: scaffold0017 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 418 - 489
Target Start/End: Original strand, 13021 - 13092
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaagctacaactaagag 489  Q
    |||| ||| |||||||||||||   || ||| |||||||||||  |||||||||||||||||||||||||||    
T  13021 taagctcacaataatcacttatccaaaataatcacttatgcatgaaattagggtagaagctacaactaagag 13092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 475
Target Start/End: Complemental strand, 67953 - 67893
Alignment:
Q  414 caattaagttcaaaataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    ||||||| | ||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||    
T  67953 caattaattgcaaaataatcactcatt-caaataagcacttatgcatagaattagggaagaa 67893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 475
Target Start/End: Complemental strand, 7061 - 7014
Alignment:
Q  428 ataatcacttatttcaattaagcacttatgcatagaattagggtagaa 475  Q
    |||||||||||| |||| |||||||||| |||||||||||||| ||||    
T  7061 ataatcacttatctcaaataagcacttaagcatagaattagggaagaa 7014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 467
Target Start/End: Original strand, 113969 - 114017
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaatta 467  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||| |||||    
T  113969 taagtgcaaaataatcacttatt-caaataagcacttatgcatataatta 114017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 466
Target Start/End: Complemental strand, 872 - 825
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaatt 466  Q
    ||||| ||||||||||||||||| ||| |||||||||||| ||||||||    
T  872 taagtgcaaaataatcacttatt-caaataagcacttatgtatagaatt 825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 470
Target Start/End: Complemental strand, 2764 - 2713
Alignment:
Q  418 taagttcaaaataatcacttatttcaattaagcacttatgcatagaattaggg 470  Q
    ||||| ||||||||||||||| ||||| |||||| ||||||||| ||||||||    
T  2764 taagtgcaaaataatcactta-ttcaaataagcagttatgcatataattaggg 2713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 446 - 486
Target Start/End: Complemental strand, 244814 - 244774
Alignment:
Q  446 taagcacttatgcatagaattagggtagaagctacaactaa 486  Q
    ||||||||||||||||||||||| | ||| |||||||||||    
T  244814 taagcacttatgcatagaattagagaagaggctacaactaa 244774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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