View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7623_low_8 (Length: 368)
Name: NF7623_low_8
Description: NF7623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7623_low_8 |
 | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 300; Significance: 1e-168; HSPs: 32)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 20 - 355
Target Start/End: Original strand, 10126749 - 10127084
Alignment:
| Q |
20 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgtt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10126749 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgtt |
10126848 |
T |
|
| Q |
120 |
gctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaat |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10126849 |
gctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaat |
10126948 |
T |
|
| Q |
220 |
gataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtca |
319 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| |
|
|
| T |
10126949 |
gataaagaagttcaacaacattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtca |
10127048 |
T |
|
| Q |
320 |
cttccataacatgggatagcaataatcttgatgtcc |
355 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
10127049 |
cttccacaacttgggatagcaataatcttgatgtcc |
10127084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 20 - 355
Target Start/End: Original strand, 10184063 - 10184398
Alignment:
| Q |
20 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgtt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10184063 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgtt |
10184162 |
T |
|
| Q |
120 |
gctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaat |
219 |
Q |
| |
|
||| || |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
10184163 |
gctgtcacagagagacacaacccataatgctataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtttacaat |
10184262 |
T |
|
| Q |
220 |
gataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtca |
319 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||| |
|
|
| T |
10184263 |
gataaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtccgaggattttgatattatgagagtaaccaagtctctccttgaatctgtca |
10184362 |
T |
|
| Q |
320 |
cttccataacatgggatagcaataatcttgatgtcc |
355 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
10184363 |
cttccacaacttgggatagcaataatcttgatgtcc |
10184398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 20 - 355
Target Start/End: Original strand, 10031824 - 10032159
Alignment:
| Q |
20 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgtt |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10031824 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctctcatggtgggtaggaaggatgacaaagagacaataatgaacatgtt |
10031923 |
T |
|
| Q |
120 |
gctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaat |
219 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10031924 |
gctatcacagagagacgcatcccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaat |
10032023 |
T |
|
| Q |
220 |
gataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtca |
319 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| |
|
|
| T |
10032024 |
gataaagaagttcaacaacattttgatttgaaggcctgggcttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtca |
10032123 |
T |
|
| Q |
320 |
cttccataacatgggatagcaataatcttgatgtcc |
355 |
Q |
| |
|
|||||| ||| | ||||||||| |||||||||||| |
|
|
| T |
10032124 |
cttccacaacttcggatagcaaagatcttgatgtcc |
10032159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 20 - 350
Target Start/End: Original strand, 10260519 - 10260849
Alignment:
| Q |
20 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgtt |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10260519 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgtt |
10260618 |
T |
|
| Q |
120 |
gctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaat |
219 |
Q |
| |
|
|||||| |||||||| ||| || | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
10260619 |
gctatcacagagagaaacaaccaacaataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtttacaat |
10260718 |
T |
|
| Q |
220 |
gataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtca |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |
|
|
| T |
10260719 |
gataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattatgagagtaaccaagtctctccttgaatcagtca |
10260818 |
T |
|
| Q |
320 |
cttccataacatgggatagcaataatcttga |
350 |
Q |
| |
|
|||| | || ||||||| |||||||||||| |
|
|
| T |
10260819 |
cttctagaaattgggatatcaataatcttga |
10260849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 20 - 355
Target Start/End: Original strand, 10663347 - 10663682
Alignment:
| Q |
20 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgtt |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
10663347 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctctcatggtgggtaggaagggtgacaaagagacaataatgaacatgtt |
10663446 |
T |
|
| Q |
120 |
gctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaat |
219 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10663447 |
gctatcacagagagacacaacccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaat |
10663546 |
T |
|
| Q |
220 |
gataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtca |
319 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| |
|
|
| T |
10663547 |
gataaagaagttcaacaacattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtca |
10663646 |
T |
|
| Q |
320 |
cttccataacatgggatagcaataatcttgatgtcc |
355 |
Q |
| |
|
|||||| ||| ||||||||||| |||||||||||| |
|
|
| T |
10663647 |
cttccacaacttgggatagcaaagatcttgatgtcc |
10663682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 21 - 355
Target Start/End: Original strand, 9838683 - 9839017
Alignment:
| Q |
21 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
120 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
9838683 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
9838782 |
T |
|
| Q |
121 |
ctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatg |
220 |
Q |
| |
|
|||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9838783 |
ctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatg |
9838882 |
T |
|
| Q |
221 |
ataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
320 |
Q |
| |
|
|| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838883 |
atgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
9838982 |
T |
|
| Q |
321 |
ttccataacatgggatagcaataatcttgatgtcc |
355 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
9838983 |
ttccataacatgggatagcaataatcttgatgtcc |
9839017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 21 - 355
Target Start/End: Original strand, 9849561 - 9849895
Alignment:
| Q |
21 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
120 |
Q |
| |
|
||||| ||||||||||| |||| ||||| ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
9849561 |
aagtgctagagtttctcgtagaacaccttctagttcaggggtaaatgaatctgtcgtggtgggtaggaagggtgacaaagagacaataatgaacatgttg |
9849660 |
T |
|
| Q |
121 |
ctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatg |
220 |
Q |
| |
|
|||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9849661 |
ctatctcaaagagacacaacccataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatg |
9849760 |
T |
|
| Q |
221 |
ataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
320 |
Q |
| |
|
|| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849761 |
atgaagaagttcaacaacattttgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
9849860 |
T |
|
| Q |
321 |
ttccataacatgggatagcaataatcttgatgtcc |
355 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
9849861 |
ttccataacatgggatagcaataatcttgatgtcc |
9849895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 21 - 355
Target Start/End: Complemental strand, 10376092 - 10375758
Alignment:
| Q |
21 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
120 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| |
|
|
| T |
10376092 |
aagtggtagagtttctcgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgataaagacactataatgaacatgttg |
10375993 |
T |
|
| Q |
121 |
ctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatg |
220 |
Q |
| |
|
||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
10375992 |
ctatcagagacagacacatcgcataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcacaacttgtttacaatg |
10375893 |
T |
|
| Q |
221 |
ataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
320 |
Q |
| |
|
|| || ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10375892 |
atgaaaaagttcaacaacattttgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
10375793 |
T |
|
| Q |
321 |
ttccataacatgggatagcaataatcttgatgtcc |
355 |
Q |
| |
|
||| | ||||||||||||||||||||||||||||| |
|
|
| T |
10375792 |
ttcaagaacatgggatagcaataatcttgatgtcc |
10375758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 22 - 355
Target Start/End: Original strand, 10580424 - 10580757
Alignment:
| Q |
22 |
agtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgc |
121 |
Q |
| |
|
|||| ||||||||||||| || ||||||||||| ||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580424 |
agtgctagagtttctcatggaactccttcaagttctgtgtttaacgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgc |
10580523 |
T |
|
| Q |
122 |
tatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatga |
221 |
Q |
| |
|
|||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10580524 |
tatcacagagaaacacaatccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatga |
10580623 |
T |
|
| Q |
222 |
taaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcact |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||| |
|
|
| T |
10580624 |
taaagaagttcaacaacattttgacatgaaggcgtgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcact |
10580723 |
T |
|
| Q |
322 |
tccataacatgggatagcaataatcttgatgtcc |
355 |
Q |
| |
|
|||| ||| | ||| ||||||||||||||||||| |
|
|
| T |
10580724 |
tccacaacttcggaaagcaataatcttgatgtcc |
10580757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 21 - 355
Target Start/End: Complemental strand, 10434291 - 10433957
Alignment:
| Q |
21 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
120 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||| ||||| ||||||||| ||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10434291 |
aagtgggagagtttctcatagaaatccttcaagttctgtggtcaatgaatctttcatggttggaaggaaggatgacaaagagacaataatgaacatgttg |
10434192 |
T |
|
| Q |
121 |
ctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatg |
220 |
Q |
| |
|
||||| |||||| ||||| | |||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10434191 |
ctatcacagagaaacacaactcataataagataggtgttgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatg |
10434092 |
T |
|
| Q |
221 |
ataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
320 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10434091 |
ataaagaagttcaacaccattttgatttgaaggcctgggcttgtgtgtctcaggattttgatattttgaaagtaaccaagtctctccttgaatcggtcac |
10433992 |
T |
|
| Q |
321 |
ttccataacatgggatagcaataatcttgatgtcc |
355 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
10433991 |
ttccagaacttgggatagcaataatcttgatgtcc |
10433957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 21 - 351
Target Start/End: Original strand, 11769056 - 11769386
Alignment:
| Q |
21 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
120 |
Q |
| |
|
||||| ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11769056 |
aagtgctagagtttctcgtagaacaccttcaagttcagtggtaaatgaatctgtcatagtgggtaggaagaatgacaaagagacaataatgaacatgttg |
11769155 |
T |
|
| Q |
121 |
ctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatg |
220 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||| |
|
|
| T |
11769156 |
ctatcacagagagacacaatccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtctacaatg |
11769255 |
T |
|
| Q |
221 |
ataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
320 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |
|
|
| T |
11769256 |
ataaagaagttcaacaatattttgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaaccaggtctctccttgaatcggtcac |
11769355 |
T |
|
| Q |
321 |
ttccataacatgggatagcaataatcttgat |
351 |
Q |
| |
|
||| | ||| ||||||||||||||||||||| |
|
|
| T |
11769356 |
ttcaagaacttgggatagcaataatcttgat |
11769386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 46 - 355
Target Start/End: Complemental strand, 10364020 - 10363711
Alignment:
| Q |
46 |
ccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctcagagagacacatcccata |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||| || | | |
|
|
| T |
10364020 |
ccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctttcaaagagagaaacaaccgaca |
10363921 |
T |
|
| Q |
146 |
ataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattttga |
245 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10363920 |
ataatataggtgttgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattttga |
10363821 |
T |
|
| Q |
246 |
catgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataat |
345 |
Q |
| |
|
||||||| |||| |||||| |||||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||| | ||| ||||||||| |
|
|
| T |
10363820 |
tttgaaggcatgggtttgtgtctctgaggattttgatattatgagagtaacaaagtctctccttgaatctgccacttccataacttcggaaagcaataat |
10363721 |
T |
|
| Q |
346 |
cttgatgtcc |
355 |
Q |
| |
|
|||||||||| |
|
|
| T |
10363720 |
cttgatgtcc |
10363711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 46 - 355
Target Start/End: Original strand, 10088637 - 10088946
Alignment:
| Q |
46 |
ccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctcagagagacacatcccata |
145 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||| || | | |
|
|
| T |
10088637 |
ccttcaagttcggtggtaaatgaatctgtcatggtgggtaggaaggatgataaagagacaataatgaacatgttgctttcaaagagagaaacaaccgaca |
10088736 |
T |
|
| Q |
146 |
ataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattttga |
245 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10088737 |
ataatataggtgttgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttga |
10088836 |
T |
|
| Q |
246 |
catgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataat |
345 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| | ||| | |||||||||| || |
|
|
| T |
10088837 |
tttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttcgacaacttcggatagcaatgat |
10088936 |
T |
|
| Q |
346 |
cttgatgtcc |
355 |
Q |
| |
|
|||| ||||| |
|
|
| T |
10088937 |
cttggtgtcc |
10088946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 46 - 355
Target Start/End: Original strand, 10195520 - 10195829
Alignment:
| Q |
46 |
ccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctcagagagacacatcccata |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| || ||||||| ||| || | | |
|
|
| T |
10195520 |
ccttcaagttcagtggtaaatgaatctgtcatggtgggtagaaaggatgataaagagacaataatgaacatgttgctttcaaagagagaaacaaccgaca |
10195619 |
T |
|
| Q |
146 |
ataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattttga |
245 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10195620 |
ataatataggtgttgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttga |
10195719 |
T |
|
| Q |
246 |
catgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataat |
345 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| | ||| | |||||||||| || |
|
|
| T |
10195720 |
tttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttcgacaacttcggatagcaatgat |
10195819 |
T |
|
| Q |
346 |
cttgatgtcc |
355 |
Q |
| |
|
|||| ||||| |
|
|
| T |
10195820 |
cttggtgtcc |
10195829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 46 - 355
Target Start/End: Original strand, 10077116 - 10077425
Alignment:
| Q |
46 |
ccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctcagagagacacatcccata |
145 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||| | || ||||||||||||||||||||||||||||||||| || | | | |||||| |
|
|
| T |
10077116 |
ccttcaagttcagtggtaaatgaatctgagatggttggtatggagcgtgacaaagagacaataatgaacatgttgctatcagggatgggcggaacccata |
10077215 |
T |
|
| Q |
146 |
ataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattttga |
245 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||| | | |||||||| |
|
|
| T |
10077216 |
ataagataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgattataaagttcgataccattttga |
10077315 |
T |
|
| Q |
246 |
catgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaataat |
345 |
Q |
| |
|
|| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | ||| ||||||| |||| || |
|
|
| T |
10077316 |
tttgcaggcatgggcttgtgtgtctgaggattttgatattatgagagtaaccaagtctctccttgaatcgatcacttctagaacttgggataacaatgat |
10077415 |
T |
|
| Q |
346 |
cttgatgtcc |
355 |
Q |
| |
|
|||||||||| |
|
|
| T |
10077416 |
cttgatgtcc |
10077425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 46 - 323
Target Start/End: Complemental strand, 11131248 - 11130971
Alignment:
| Q |
46 |
ccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctcagagagacacatcccata |
145 |
Q |
| |
|
||||| ||||| ||||| |||||||| ||||||| ||||| |||||||||||||||||||||| ||||||||||||||| |||| ||| | ||| |
|
|
| T |
11131248 |
ccttctagttctgtggttaatgaatcattcatggttggtagaaaggatgacaaagagacaataacgaacatgttgctatcaaagagcagcactagcaata |
11131149 |
T |
|
| Q |
146 |
ataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattttga |
245 |
Q |
| |
|
| ||||| ||||||||||||||||| || ||||||||| | |||||||| |||||||| ||| ||| |||||||||| || |||||||| |||| ||||| |
|
|
| T |
11131148 |
acaatatcggtgttgttgcaattttaggtatgggaggtgtcggaaaaacaacccttgcacaaattgcttacaatgatgaaaaagttcaagaacactttga |
11131049 |
T |
|
| Q |
246 |
catgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttc |
323 |
Q |
| |
|
| || || ||||||||||| || ||||||||||||||||| |||||||| || ||||||||||||| |||||||| |
|
|
| T |
11131048 |
tctcaaagcatgggcttgtgtatcggaggattttgatattttaagagtaactaaaactctccttgaatctgtcacttc |
11130971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 46 - 323
Target Start/End: Complemental strand, 11149076 - 11148799
Alignment:
| Q |
46 |
ccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctcagagagacacatcccata |
145 |
Q |
| |
|
||||| ||||| ||||| |||||||| ||||||| ||||| |||||||||||||||| ||||| ||||||||||||||| |||| ||| | ||| |
|
|
| T |
11149076 |
ccttctagttctgtggttaatgaatcattcatggttggtagaaaggatgacaaagagataataacgaacatgttgctatcaaagagcagcactagcaata |
11148977 |
T |
|
| Q |
146 |
ataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattttga |
245 |
Q |
| |
|
| ||||| ||||||||||||||||| || ||||||||| | |||||||| |||||||| ||| ||| |||||||||| || |||||||| |||| ||||| |
|
|
| T |
11148976 |
acaatatcggtgttgttgcaattttaggtatgggaggtgtcggaaaaacaacccttgcacaaattgcttacaatgatgaaaaagttcaagaacactttga |
11148877 |
T |
|
| Q |
246 |
catgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttc |
323 |
Q |
| |
|
| || || ||||||||||| || ||||||||||||||||| |||||||| || ||||||||||||| |||||||| |
|
|
| T |
11148876 |
tctcaaagcatgggcttgtgtatcggaggattttgatattttaagagtaactaaaactctccttgaatctgtcacttc |
11148799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 24 - 351
Target Start/End: Complemental strand, 11160261 - 11159934
Alignment:
| Q |
24 |
tggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgcta |
123 |
Q |
| |
|
||||| |||||||| |||| |||||||||||||| || |||| |||||||||||| ||||| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
11160261 |
tggtaaagtttctcgtagaaccccttcaagttcagtagttaatgcatctgtcatggttggtagaaatgatgataaagagacaataatgaacatgttgcta |
11160162 |
T |
|
| Q |
124 |
tctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgata |
223 |
Q |
| |
|
|| |||| ||| | |||| |||||||| |||||||||||||| || ||||||||| | || ||||| || ||||| ||||||||||||||| || |
|
|
| T |
11160161 |
tcagagagtagcactggcaataacaatataggcgttgttgcaattttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaataatg |
11160062 |
T |
|
| Q |
224 |
aagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttc |
323 |
Q |
| |
|
|| |||||||| | |||||||| | || || ||||||||||| |||||||||||||||||||| ||||| || |||| |||||||| |||||||| |
|
|
| T |
11160061 |
aaaaagttcaagatcattttgatttcaaagcatgggcttgtgtatctgaggattttgatattttatctgtaactaaaactcttcttgaatctgtcacttc |
11159962 |
T |
|
| Q |
324 |
cataacatgggatagcaataatcttgat |
351 |
Q |
| |
|
| | | ||||| | ||||||||||||| |
|
|
| T |
11159961 |
aagagcttgggaaaccaataatcttgat |
11159934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 24 - 287
Target Start/End: Original strand, 10889131 - 10889394
Alignment:
| Q |
24 |
tggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgcta |
123 |
Q |
| |
|
||||| |||||||| |||| |||||||||||||| || ||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||| |
|
|
| T |
10889131 |
tggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacaataatgaacatgttgcta |
10889230 |
T |
|
| Q |
124 |
tctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgata |
223 |
Q |
| |
|
|| |||| ||| |||| ||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| |||||||||||||||||| |
|
|
| T |
10889231 |
tcagagagcagcactaggaataacaatatcggtgttgttgcaattttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaatgatg |
10889330 |
T |
|
| Q |
224 |
aagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatatttt |
287 |
Q |
| |
|
|| |||||||| | || ||||| | || || ||||||||||| |||||||||||||||||||| |
|
|
| T |
10889331 |
aaaaagttcaagagcactttgatctcaaagcatgggcttgtgtatctgaggattttgatatttt |
10889394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 24 - 351
Target Start/End: Original strand, 8861111 - 8861438
Alignment:
| Q |
24 |
tggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgcta |
123 |
Q |
| |
|
||||| |||||||| |||| |||||||||||||| || ||||||||||||||||| ||||| || ||||| ||||||||| ||||||||||||||||| |
|
|
| T |
8861111 |
tggtaaagtttctcgtagaaccccttcaagttcagtagttaatgaatctgtcatggttggtagaaatgatgataaagagacagtaatgaacatgttgcta |
8861210 |
T |
|
| Q |
124 |
tctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgata |
223 |
Q |
| |
|
|| |||| ||| |||| ||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| |||||||||||||||||| |
|
|
| T |
8861211 |
tcagagagcagcactaggaataacaatatcggtgttgttgcaattttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaatgatg |
8861310 |
T |
|
| Q |
224 |
aagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttc |
323 |
Q |
| |
|
|| |||||||| | || ||||| | || || ||||||||||| || |||||||||||||||| | ||||| || |||| |||||||| |||||||| |
|
|
| T |
8861311 |
aaaaagttcaagagcactttgatctcaaagcatgggcttgtgtatcagaggattttgatatttcaactgtaactaaaactcttcttgaatctgtcacttc |
8861410 |
T |
|
| Q |
324 |
cataacatgggatagcaataatcttgat |
351 |
Q |
| |
|
| | | ||||| | ||||||||||||| |
|
|
| T |
8861411 |
aagagcttgggaaaacaataatcttgat |
8861438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 28 - 296
Target Start/End: Original strand, 13289494 - 13289762
Alignment:
| Q |
28 |
agagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctc |
127 |
Q |
| |
|
|||||||||| |||| ||||||||||||| |||||||| ||||||| ||||| |||||||||||||| ||||||| | | || | |||||| ||||| |
|
|
| T |
13289494 |
agagtttctcttagaacgccttcaagttcaatggtaaataaatctgttatggttggtaggaaggatgataaagagagactcattagtatgttgatatctg |
13289593 |
T |
|
| Q |
128 |
agagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaaga |
227 |
Q |
| |
|
| || | ||| || ||| || ||| ||||| || ||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| ||||||||||| |
|
|
| T |
13289594 |
acagtggcactaccaatagtagtattggtgtggtcgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaaga |
13289693 |
T |
|
| Q |
228 |
agttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
296 |
Q |
| |
|
||||||| | |||||||| |||| | |||| |||||| || |||||||| ||||||||||||||||| |
|
|
| T |
13289694 |
agttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattttgagagtaac |
13289762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 28 - 296
Target Start/End: Original strand, 13332733 - 13333001
Alignment:
| Q |
28 |
agagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctc |
127 |
Q |
| |
|
|||||||||| |||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||| ||||||| | | || | |||||| ||||| |
|
|
| T |
13332733 |
agagtttctcttagaacgccttcaagttcaatggtaaatgaatctgttatggttggtaggaaggatgataaagagagactcattagtatgttgatatctg |
13332832 |
T |
|
| Q |
128 |
agagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaaga |
227 |
Q |
| |
|
| || | ||| || ||| || | | ||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| ||||||||||| |
|
|
| T |
13332833 |
acagtggcactaccaatagtagtgttggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaaga |
13332932 |
T |
|
| Q |
228 |
agttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
296 |
Q |
| |
|
||||||| | |||||||| |||| | |||| |||||| || |||||||| |||||| |||||||||| |
|
|
| T |
13332933 |
agttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagtaac |
13333001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 296
Target Start/End: Original strand, 13170860 - 13171128
Alignment:
| Q |
28 |
agagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctc |
127 |
Q |
| |
|
|||||||||| ||| ||||||||||||| |||||||||||||||| ||||| || ||||||||||| ||||||| | | || | |||||| ||||| |
|
|
| T |
13170860 |
agagtttctctaagaacgccttcaagttcaatggtaaatgaatctgttatggttggaaggaaggatgataaagagagactcattagtatgttgatatctg |
13170959 |
T |
|
| Q |
128 |
agagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaaga |
227 |
Q |
| |
|
| || | ||| || ||| || ||| ||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| ||||||||||| |
|
|
| T |
13170960 |
acagtggcactaccaatagtagtattggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaaga |
13171059 |
T |
|
| Q |
228 |
agttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
296 |
Q |
| |
|
||||||| | |||||||| |||| | |||| |||||| || |||||||| |||||| |||||||||| |
|
|
| T |
13171060 |
agttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagtaac |
13171128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 46 - 293
Target Start/End: Original strand, 13343936 - 13344183
Alignment:
| Q |
46 |
ccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctcagagagacacatcccata |
145 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||| |||||||||||||| ||||||| | | || | |||||| ||||| | || | ||| || ||| |
|
|
| T |
13343936 |
ccttcaagttcaatggtaaatgaatctgttatggttggtaggaaggatgataaagagagactcattagtatgttgatatctgacagtggcactaccaata |
13344035 |
T |
|
| Q |
146 |
ataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattttga |
245 |
Q |
| |
|
|| ||| ||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| |||||||||||||||||| | |||||||| |
|
|
| T |
13344036 |
gtagtattggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttga |
13344135 |
T |
|
| Q |
246 |
catgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagt |
293 |
Q |
| |
|
|||| | |||| |||||| || |||||||| |||||| ||||||| |
|
|
| T |
13344136 |
tctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagt |
13344183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 28 - 296
Target Start/End: Original strand, 13160809 - 13161077
Alignment:
| Q |
28 |
agagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctc |
127 |
Q |
| |
|
|||||||||| ||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||| || |||| | | | | |||||| ||||| |
|
|
| T |
13160809 |
agagtttctctaagaacgccttcaagttcaatggtaaatgaatctgttatggttggtaggaaggatgataaggagagactcgttagtatgttgatatctg |
13160908 |
T |
|
| Q |
128 |
agagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaaga |
227 |
Q |
| |
|
| || | ||| || ||| || ||| ||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| ||||||||||| |
|
|
| T |
13160909 |
acagtggcactaccaatagtagtattggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaaga |
13161008 |
T |
|
| Q |
228 |
agttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
296 |
Q |
| |
|
||||||| | |||||||| |||| | |||| |||||| || |||||||| |||||| |||||||||| |
|
|
| T |
13161009 |
agttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagtaac |
13161077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 143 - 314
Target Start/End: Original strand, 10527281 - 10527452
Alignment:
| Q |
143 |
ataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattt |
242 |
Q |
| |
|
|||||||| |||||||||||||||| ||||| ||||||||| | || ||||| |||||||| |||||||||||||||||| || | ||| |||| ||||| |
|
|
| T |
10527281 |
ataataatttaggtgttgttgcaatcttgggtatgggaggtgtcggtaaaacaacccttgcacaacttgtttacaatgatgaaaaggttgaacaccattt |
10527380 |
T |
|
| Q |
243 |
tgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
314 |
Q |
| |
|
||| | ||||| |||| || ||| || |||||||| ||| || |||||||||||||||||||| ||||||| |
|
|
| T |
10527381 |
tgatctcaaggcctgggtttatgtatcagaggatttcgatgttgtgagagtaaccaagtctctcattgaatc |
10527452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 20 - 314
Target Start/End: Original strand, 10500374 - 10500671
Alignment:
| Q |
20 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgtt |
119 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | | | | || ||||| |
|
|
| T |
10500374 |
taagtggtagagtttctcgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaatgatgataaagatagactcgtcaatatgtt |
10500473 |
T |
|
| Q |
120 |
gctatctcagagagacacatcc---cataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttac |
216 |
Q |
| |
|
| |||| | | | ||| | |||||||| |||||||||||||||||||||| |||||||| | || ||||| || ||||| |||||||||||| |
|
|
| T |
10500474 |
ggtatcagatattggaacaggcagaaataataatttaggtgttgttgcaattttgggtatgggaggcgtcggtaaaacaacacttgctcaacttgtttac |
10500573 |
T |
|
| Q |
217 |
aatgataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
314 |
Q |
| |
|
|| || | || || || |||||||||| ||||||| ||| |||||| | |||||||| ||| || ||||| ||||||| |||||||||||||| |
|
|
| T |
10500574 |
aacgacgataaaattgaagaacattttgatctgaaggcatggatttgtgtaccggaggatttcgatgttgtgagaataaccaaatctctccttgaatc |
10500671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 143 - 314
Target Start/End: Original strand, 10517408 - 10517579
Alignment:
| Q |
143 |
ataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattt |
242 |
Q |
| |
|
|||||||| ||||||||| ||||||| |||| |||||||| | || ||||| |||||||| || |||||||||||||| | ||||| |||||||||| |
|
|
| T |
10517408 |
ataataatttaggtgttgctgcaattgtgggtatgggaggcgtcggtaaaacgacccttgcacagtttgtttacaatgatgcaaaagttgaacaacattt |
10517507 |
T |
|
| Q |
243 |
tgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
314 |
Q |
| |
|
||| | || || |||| |||||| ||||||||||||||| || | |||| |||||||||| |||||||||| |
|
|
| T |
10517508 |
tgatttcaaagcctgggtttgtgtatctgaggattttgatgttattagagcaaccaagtctatccttgaatc |
10517579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 314
Target Start/End: Complemental strand, 11782128 - 11781957
Alignment:
| Q |
143 |
ataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattt |
242 |
Q |
| |
|
|||||||| |||||||||| ||||||||||| |||||||| | || ||||| |||||||| || ||||||||||||||| ||||| |||||||||| |
|
|
| T |
11782128 |
ataataatttaggtgttgtcgcaattttgggtatgggaggcgtcggtaaaacgacccttgcacagcttgtttacaatgatgtgaaagttgaacaacattt |
11782029 |
T |
|
| Q |
243 |
tgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
314 |
Q |
| |
|
||| | || | |||| |||||| || |||||||| ||| || | ||| |||||||||||||||||||||| |
|
|
| T |
11782028 |
tgatttcaaagtctgggtttgtgtatcggaggatttcgatgttgttagaataaccaagtctctccttgaatc |
11781957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 10527156 - 10527237
Alignment:
| Q |
20 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaaga |
101 |
Q |
| |
|
|||||| |||| |||||| |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
10527156 |
taagtgatagattttctcgtagaaccccttcaagttcagtggtaaatgaatctgtcattgtgggtaggaatgatgataaaga |
10527237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 11782254 - 11782173
Alignment:
| Q |
20 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaaga |
101 |
Q |
| |
|
|||||||| |||||||| |||| ||||||||||||||| ||||| |||||| | ||||||||||||| ||||| ||||| |
|
|
| T |
11782254 |
taagtggtggagtttcttctagaaccccttcaagttcagtgctaaatcaatctgacgtggtgggtaggaatgatgataaaga |
11782173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 10517310 - 10517363
Alignment:
| Q |
48 |
ttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaaga |
101 |
Q |
| |
|
||||||||| ||| |||||||||||| | ||||||||||||| ||||| ||||| |
|
|
| T |
10517310 |
ttcaagttcggtgctaaatgaatctgacgtggtgggtaggaatgatgataaaga |
10517363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 21 - 355
Target Start/End: Original strand, 26906719 - 26907053
Alignment:
| Q |
21 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttg |
120 |
Q |
| |
|
||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26906719 |
aagtgctagagtttctcgtagaacaccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaatatgttg |
26906818 |
T |
|
| Q |
121 |
ctatctcagagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatg |
220 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
26906819 |
ctatcagagagagacacaacccataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttctttacaatg |
26906918 |
T |
|
| Q |
221 |
ataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcac |
320 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| |||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
26906919 |
ataaagaagttcaacggcattttgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaaccaaatctctccttgaatcggtcac |
26907018 |
T |
|
| Q |
321 |
ttccataacatgggatagcaataatcttgatgtcc |
355 |
Q |
| |
|
||||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
26907019 |
ttccagaacttgggataccaataatcttgatgtcc |
26907053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 28 - 296
Target Start/End: Complemental strand, 146179 - 145911
Alignment:
| Q |
28 |
agagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctc |
127 |
Q |
| |
|
|||||||||| ||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||| ||||||| | | || | |||||| ||||| |
|
|
| T |
146179 |
agagtttctctaagaacgccttcaagttcaatggtaaatgaatctgttatggttggtaggaaggatgataaagagagactcattagtatgttgatatctg |
146080 |
T |
|
| Q |
128 |
agagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaaga |
227 |
Q |
| |
|
| || | ||| || ||| || ||| ||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| ||||||||||| |
|
|
| T |
146079 |
acagtggcactaccaatagtagtattggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaaga |
145980 |
T |
|
| Q |
228 |
agttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
296 |
Q |
| |
|
||||||| | |||||||| |||| | |||| |||||| || |||||||| |||||| |||||||||| |
|
|
| T |
145979 |
agttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagtaac |
145911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 28 - 296
Target Start/End: Complemental strand, 136128 - 135860
Alignment:
| Q |
28 |
agagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaagagacaataatgaacatgttgctatctc |
127 |
Q |
| |
|
|||||||||| ||| ||||||||||||| |||||||||||||||| ||||| || ||||||||||| ||||||| | | || | |||||| ||||| |
|
|
| T |
136128 |
agagtttctctaagaacgccttcaagttcaatggtaaatgaatctgttatggttggaaggaaggatgataaagagagactcattagtatgttgatatctg |
136029 |
T |
|
| Q |
128 |
agagagacacatcccataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaaga |
227 |
Q |
| |
|
| || | ||| || ||| || ||| ||||| |||||||||||||| ||||| ||| | || ||||| || |||||||||||| |||| ||||||||||| |
|
|
| T |
136028 |
acagtggcactaccaatagtagtattggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaaga |
135929 |
T |
|
| Q |
228 |
agttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaac |
296 |
Q |
| |
|
||||||| | |||||||| |||| | |||| |||||| || |||||||| |||||| |||||||||| |
|
|
| T |
135928 |
agttcaagaccattttgatctgaaagtctgggtttgtgtatcggaggatttcgatattctgagagtaac |
135860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 143 - 314
Target Start/End: Complemental strand, 17853069 - 17852898
Alignment:
| Q |
143 |
ataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattt |
242 |
Q |
| |
|
|||| ||| |||||||||||||||| ||||| ||||||||| | || ||||| |||||||| || ||||||||||||||| || | ||| |||| ||||| |
|
|
| T |
17853069 |
ataacaatttaggtgttgttgcaatattggggatgggaggtgtcggtaaaacgacccttgcacagcttgtttacaatgatgaaaaggttgaacatcattt |
17852970 |
T |
|
| Q |
243 |
tgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
314 |
Q |
| |
|
||| | || || |||| |||||| || || ||||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
17852969 |
tgatctcaaagcctgggtttgtgtatcagaagattttgatgttgtgagagtaaccaagtctctccttgaatc |
17852898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 17853195 - 17853116
Alignment:
| Q |
20 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatgacaaa |
99 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||| |
|
|
| T |
17853195 |
taagtggtagagtttctcgtagaaccccttcaagttccgtggtaaatgaatctgtcatggtaggaaggaatgatgataaa |
17853116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 7129044 - 7128961
Alignment:
| Q |
199 |
cttgcccaacttgtttacaatgataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgat |
282 |
Q |
| |
|
||||| |||||||| |||||||| |||||||| |||||||||||||| |||| |||| |||||| ||||| ||||||||| |
|
|
| T |
7129044 |
cttgctcaacttgtatacaatgacaaagaagtgcaacaacattttgagttgaaaaaatgggtttgtgtttctgatgattttgat |
7128961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 7482094 - 7482177
Alignment:
| Q |
199 |
cttgcccaacttgtttacaatgataaagaagttcaacaacattttgacatgaaggcgtgggcttgtgtgtctgaggattttgat |
282 |
Q |
| |
|
||||| |||||||| |||||||| |||||||| |||||||||||| | |||| ||||| |||||| ||||| ||||||||| |
|
|
| T |
7482094 |
cttgctcaacttgtatacaatgacaaagaagtgcaacaacattttcagttgaaaaagtgggtttgtgtttctgatgattttgat |
7482177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 143 - 314
Target Start/End: Original strand, 11484961 - 11485132
Alignment:
| Q |
143 |
ataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattt |
242 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |||||||| | || ||||| |||||||| |||||||||||||| ||| || ||||| |||| ||||| |
|
|
| T |
11484961 |
ataataatttaggtgttgttgcaattttggttatgggaggcgtcggtaaaacgacccttgcacaacttgtttacaacgatgaaaaagttgaacagcattt |
11485060 |
T |
|
| Q |
243 |
tgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatc |
314 |
Q |
| |
|
||| | || || |||| |||||| || |||||||| ||| | |||| |||||||||| ||||||||||| |
|
|
| T |
11485061 |
tgatctcaaagcatgggtttgtgtatcggaggatttcgatgtcgtgaggataaccaagtccctccttgaatc |
11485132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 242
Target Start/End: Complemental strand, 44957834 - 44957735
Alignment:
| Q |
143 |
ataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattt |
242 |
Q |
| |
|
|||||||| ||||||||||||| | || || ||||||||| | || ||||| || || || ||||||||||||||||||| | ||||| |||||||||| |
|
|
| T |
44957834 |
ataataatttaggtgttgttgccaccttaggtatgggaggtgtcggtaaaacgactctcgcacaacttgtttacaatgatataaaagttgaacaacattt |
44957735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 11484835 - 11484904
Alignment:
| Q |
20 |
taagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaa |
89 |
Q |
| |
|
|||| ||||||||||||| |||| || |||||||||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
11484835 |
taagaggtagagtttctcgtagaacaccatcaagttcagtggtgaatgaatctgttatggtgggaaggaa |
11484904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 44957956 - 44957888
Alignment:
| Q |
21 |
aagtggtagagtttctcatagactgccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaa |
89 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||||| ||| ||||||||| | |||||||| ||||| |
|
|
| T |
44957956 |
aagtgctagagtttctcatagaacaccttcaagttcaggggttaatgaatctattatggtgggcaggaa |
44957888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 50030 - 49981
Alignment:
| Q |
46 |
ccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatga |
95 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50030 |
ccttcaagttcagtggtaaatgaatctgtcatggtgggtaggaaggatga |
49981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 298
Target Start/End: Complemental strand, 31679845 - 31679703
Alignment:
| Q |
156 |
tgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattttgacatgaaggcg |
255 |
Q |
| |
|
||||||| ||||||| |||||||||||| | || ||||| |||| || |||||| |||||||||||||||| |||||| ||| |||||| | || || |
|
|
| T |
31679845 |
tgttgtttcaattttcggcatgggaggtgtcggtaaaacagccctagctcaacttctttacaatgataaagatgttcaagaacgttttgatgtaaaagct |
31679746 |
T |
|
| Q |
256 |
tgggcttgtgtgtctgaggattttgatattttgagagtaacca |
298 |
Q |
| |
|
|||| |||| |||| || || |||||| ||||||| ||||||| |
|
|
| T |
31679745 |
tgggtttgtctgtccgaagagtttgatgttttgagggtaacca |
31679703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 143 - 312
Target Start/End: Original strand, 29836587 - 29836756
Alignment:
| Q |
143 |
ataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattt |
242 |
Q |
| |
|
|||||||||||||||| || |||||| |||||||||||| | || ||||| ||||| || | |||| | ||||| | |||||||| || | ||||| |
|
|
| T |
29836587 |
ataataatataggtgtagtcgcaattacaggcatgggaggtatcggtaaaacgaccctcgctcgacttatatacaaccaggaagaagttaaaaatcattt |
29836686 |
T |
|
| Q |
243 |
tgacatgaaggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaa |
312 |
Q |
| |
|
||| | | | |||| |||||||||||| ||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
29836687 |
tgatgtacaagtctgggtttgtgtgtctgaagattttgatatgttgagagtaaccaaatctctccttgaa |
29836756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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