View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7626_high_12 (Length: 269)
Name: NF7626_high_12
Description: NF7626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7626_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 2493661 - 2493795
Alignment:
| Q |
16 |
ataaaactgaacaatgaacagagaaaattaaattaaatcatatcaaacatttccacacgtacaagcaagccagcatcagaaaaatttcagaacagtaacc |
115 |
Q |
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| T |
2493661 |
ataaaactgaacaatgaacagagaaaattaaattaaatcatatcaaacatttccacacgtacaagcaagccagcatcagaaaaatttcagaacagtaacc |
2493760 |
T |
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| Q |
116 |
aattccaagaactaacactcctagtaccatcaact |
150 |
Q |
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| T |
2493761 |
aattccaagaactaacactcctagtaccatcaact |
2493795 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 2493871 - 2493918
Alignment:
| Q |
222 |
cccttaacttgatcatatctaaaaatgttaacaaaggtgatgataatt |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
2493871 |
cccttaacttgatcatatctaaaaatgttaacaaaggtgatcataatt |
2493918 |
T |
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