View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7626_high_18 (Length: 227)
Name: NF7626_high_18
Description: NF7626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7626_high_18 |
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Alignment Details
Target: chr8 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 40324385 - 40324592
Alignment:
| Q |
15 |
aggatttgtcagacaattgggtgcatattttaatgttgcattttggattctcaaaaccctatttttaacaaaagctatatgaaactccttnnnnnnnnnn |
114 |
Q |
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| T |
40324385 |
aggatttgtcagacaattgggtgcatattttaatgttgcattttggattctcaaaaccctatttttaacaaaacctatatgaaactccttcaaaaaaaaa |
40324484 |
T |
|
| Q |
115 |
nnnnn----gctatatgaaatgatgttaagatcaaatttcctatatagataaagatcatcgtgagttgatgttgagtatgactcatatatatgatttatg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40324485 |
aaaaaaaaagctatatgaaatgatgttaagatcaaatttcctatatatataaagatcatcgtgagttgatgttgagtatgactcatatatatgatttatg |
40324584 |
T |
|
| Q |
211 |
agtattat |
218 |
Q |
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||||||| |
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| T |
40324585 |
ggtattat |
40324592 |
T |
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