View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7626_low_12 (Length: 307)
Name: NF7626_low_12
Description: NF7626
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7626_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 23 - 298
Target Start/End: Original strand, 18517777 - 18518052
Alignment:
| Q |
23 |
acctttaccgaaattctcgtgatttaaaccatttgggttatcaaaactaaactcgaaagaatgatcgcgaaactctacagattcagaaccgtatccggtg |
122 |
Q |
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| T |
18517777 |
acctttaccgaaattctcatgatttaaaccatttgggttatcaaaactaaactcgaaagaatgatcacgaaactctacagattcagaaccgtatccggtg |
18517876 |
T |
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| Q |
123 |
taataaagccaataaacagcattagaacctctaaccctgtaactagacatgattaacaacccagaaggcctaattccgcgagtatcgaaaccccaccaat |
222 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |
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| T |
18517877 |
taataaagccaataaacagcattagaacctctaaccctgtaactagacatgattaacaatccagagggcctaattccgcgagtatcgaaaccccaccaat |
18517976 |
T |
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| Q |
223 |
ctttaccacaattcatcacaaaaccaacatcagaacttgatttggcaggacctccactgcgttcccaatgaacacc |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |
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| T |
18517977 |
ctttaccacaattcatcacaaaaccaacatcagaacttgattttgcaggacctccaccgcgttcccaatgaacacc |
18518052 |
T |
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