View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7627_low_5 (Length: 213)
Name: NF7627_low_5
Description: NF7627
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7627_low_5 |
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Alignment Details
Target: chr2 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 41818098 - 41818291
Alignment:
| Q |
1 |
attactagtatcaaattaagttgtttaattatgtttttgttatgttaattgatgtgaaaagtattgaaattatattggagtttcacattgttaaaatttc |
100 |
Q |
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| T |
41818098 |
attactagtatcaatttaagttgtttaattatgtttttgttatgttaattgatgtgaaaagtattgaaattatattggagtttcacatcgttaaaatttc |
41818197 |
T |
|
| Q |
101 |
ttagttctacaatgtatattcgtgtgtcctagttttaccaactagcattttaatgtgggatacaagcttgtttagcatagtttatgtgcttgat |
194 |
Q |
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| T |
41818198 |
ttagttctacaatgtatatttgtgtgttctagttttaccaactagcattttaatgtgggatacaagcttgtttaacatagtttatgtgcttgat |
41818291 |
T |
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