View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7628_high_3 (Length: 492)

Name: NF7628_high_3
Description: NF7628
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7628_high_3
NF7628_high_3
[»] chr7 (42 HSPs)
chr7 (20-261)||(43343761-43344003)
chr7 (262-448)||(18776683-18776867)
chr7 (262-448)||(29077221-29077404)
chr7 (262-448)||(20091197-20091382)
chr7 (265-448)||(8171460-8171640)
chr7 (262-448)||(12596207-12596388)
chr7 (262-448)||(19692095-19692279)
chr7 (262-448)||(23550988-23551172)
chr7 (345-460)||(7398440-7398555)
chr7 (262-448)||(10329327-10329511)
chr7 (261-425)||(26254017-26254179)
chr7 (261-448)||(48983755-48983945)
chr7 (261-444)||(28749715-28749896)
chr7 (261-448)||(38414792-38414977)
chr7 (264-448)||(8239688-8239869)
chr7 (261-448)||(24525598-24525786)
chr7 (261-448)||(47984884-47985071)
chr7 (345-460)||(27237421-27237536)
chr7 (262-448)||(25010434-25010611)
chr7 (346-460)||(9021799-9021912)
chr7 (261-448)||(10955485-10955672)
chr7 (352-460)||(18201126-18201234)
chr7 (353-460)||(12981315-12981422)
chr7 (345-454)||(2611260-2611369)
chr7 (353-460)||(23859062-23859169)
chr7 (346-425)||(33162338-33162417)
chr7 (353-456)||(36891571-36891674)
chr7 (346-460)||(6765680-6765794)
chr7 (345-460)||(12419493-12419608)
chr7 (347-445)||(36902924-36903022)
chr7 (345-437)||(23744808-23744900)
chr7 (353-460)||(20153190-20153297)
chr7 (128-261)||(43338774-43338914)
chr7 (369-447)||(38971255-38971333)
chr7 (268-330)||(40357303-40357365)
chr7 (361-453)||(23020498-23020589)
chr7 (414-460)||(9014829-9014875)
chr7 (396-458)||(17800270-17800332)
chr7 (346-432)||(21763586-21763672)
chr7 (20-68)||(43338956-43339004)
chr7 (346-388)||(9014177-9014219)
chr7 (368-428)||(26917728-26917788)
[»] chr5 (46 HSPs)
chr5 (262-448)||(27079012-27079197)
chr5 (270-448)||(34756289-34756465)
chr5 (261-450)||(36187794-36187980)
chr5 (262-448)||(15480006-15480188)
chr5 (262-448)||(16591990-16592173)
chr5 (262-444)||(31194528-31194706)
chr5 (262-448)||(38869279-38869462)
chr5 (261-448)||(9364292-9364477)
chr5 (262-448)||(16198709-16198893)
chr5 (262-448)||(22986473-22986657)
chr5 (266-448)||(19523200-19523380)
chr5 (267-448)||(2274891-2275070)
chr5 (261-448)||(16799239-16799426)
chr5 (263-448)||(28822253-28822441)
chr5 (265-448)||(30854330-30854511)
chr5 (345-460)||(34425892-34426007)
chr5 (345-460)||(36868872-36868987)
chr5 (262-447)||(27924084-27924267)
chr5 (346-460)||(14318382-14318496)
chr5 (262-444)||(7670929-7671118)
chr5 (345-460)||(1366522-1366637)
chr5 (345-456)||(2024638-2024749)
chr5 (345-458)||(33037771-33037884)
chr5 (277-460)||(40794257-40794438)
chr5 (353-460)||(2530901-2531008)
chr5 (346-425)||(7338023-7338102)
chr5 (345-460)||(11242314-11242429)
chr5 (345-448)||(23284058-23284161)
chr5 (262-444)||(31881348-31881528)
chr5 (346-460)||(2412077-2412191)
chr5 (350-448)||(40389537-40389635)
chr5 (345-458)||(10407452-10407565)
chr5 (347-458)||(22648734-22648845)
chr5 (353-460)||(10543663-10543769)
chr5 (353-460)||(24395728-24395835)
chr5 (353-445)||(26718953-26719045)
chr5 (353-445)||(26988697-26988789)
chr5 (346-460)||(41911614-41911728)
chr5 (262-330)||(23283943-23284011)
chr5 (345-392)||(606211-606258)
chr5 (352-458)||(17344947-17345053)
chr5 (261-327)||(40389452-40389518)
chr5 (368-457)||(15639635-15639724)
chr5 (345-389)||(27530543-27530587)
chr5 (352-388)||(22875003-22875039)
chr5 (345-385)||(35080766-35080806)
[»] chr6 (24 HSPs)
chr6 (262-448)||(13727317-13727501)
chr6 (261-448)||(21479498-21479684)
chr6 (262-447)||(21280550-21280733)
chr6 (263-448)||(33774121-33774305)
chr6 (262-448)||(27788608-27788790)
chr6 (262-448)||(20711638-20711822)
chr6 (261-448)||(30832442-30832626)
chr6 (262-448)||(19737612-19737794)
chr6 (262-448)||(24710914-24711101)
chr6 (262-448)||(17353958-17354142)
chr6 (261-425)||(27314096-27314258)
chr6 (276-448)||(28075787-28075960)
chr6 (352-460)||(2477590-2477698)
chr6 (264-444)||(1155767-1155947)
chr6 (345-450)||(34397859-34397964)
chr6 (357-459)||(21183686-21183788)
chr6 (352-460)||(6159430-6159538)
chr6 (270-448)||(235151-235328)
chr6 (369-460)||(4036940-4037031)
chr6 (353-460)||(20611782-20611889)
chr6 (346-431)||(30121783-30121868)
chr6 (268-321)||(19987277-19987330)
chr6 (405-446)||(27994775-27994816)
chr6 (277-313)||(20611924-20611960)
[»] chr2 (37 HSPs)
chr2 (262-448)||(12337365-12337550)
chr2 (262-448)||(4505894-4506078)
chr2 (262-448)||(3155217-3155401)
chr2 (265-448)||(6965007-6965186)
chr2 (262-448)||(8906996-8907181)
chr2 (262-447)||(27506659-27506841)
chr2 (262-448)||(24410437-24410623)
chr2 (262-448)||(29939781-29939964)
chr2 (265-448)||(10762488-10762667)
chr2 (262-448)||(26716128-26716313)
chr2 (265-432)||(34693991-34694155)
chr2 (265-432)||(34716403-34716567)
chr2 (261-422)||(40636164-40636322)
chr2 (262-448)||(9046029-9046213)
chr2 (345-458)||(16096998-16097111)
chr2 (347-460)||(38400786-38400899)
chr2 (261-448)||(3953006-3953189)
chr2 (345-460)||(24035544-24035659)
chr2 (262-448)||(7162784-7162967)
chr2 (345-460)||(21665699-21665814)
chr2 (345-460)||(12134039-12134154)
chr2 (262-460)||(16227285-16227482)
chr2 (262-377)||(1396617-1396730)
chr2 (268-422)||(5952642-5952791)
chr2 (277-457)||(7742063-7742245)
chr2 (345-458)||(13800543-13800657)
chr2 (345-452)||(28425709-28425816)
chr2 (346-427)||(42029166-42029247)
chr2 (346-460)||(11912757-11912871)
chr2 (262-392)||(8327674-8327801)
chr2 (379-460)||(37182658-37182739)
chr2 (396-460)||(11952656-11952720)
chr2 (374-458)||(22727530-22727614)
chr2 (277-386)||(22727391-22727497)
chr2 (424-460)||(37622418-37622454)
chr2 (353-392)||(10252472-10252511)
chr2 (346-382)||(11952588-11952624)
[»] chr8 (35 HSPs)
chr8 (261-448)||(2952136-2952323)
chr8 (265-448)||(30883330-30883512)
chr8 (261-448)||(42600783-42600968)
chr8 (261-448)||(45475818-45476002)
chr8 (261-448)||(3048434-3048619)
chr8 (261-448)||(37430075-37430260)
chr8 (262-448)||(23606548-23606731)
chr8 (265-448)||(13534609-13534788)
chr8 (265-448)||(13624149-13624328)
chr8 (262-448)||(23798179-23798363)
chr8 (262-448)||(10917392-10917575)
chr8 (273-448)||(5860671-5860846)
chr8 (261-448)||(41879182-41879365)
chr8 (353-455)||(8102906-8103008)
chr8 (345-458)||(7944521-7944634)
chr8 (346-460)||(39332405-39332519)
chr8 (345-458)||(11290175-11290288)
chr8 (345-458)||(5973106-5973219)
chr8 (345-460)||(41677172-41677288)
chr8 (345-460)||(15167414-15167529)
chr8 (354-460)||(5721548-5721654)
chr8 (368-460)||(5942685-5942777)
chr8 (353-457)||(15078750-15078854)
chr8 (345-458)||(34789861-34789974)
chr8 (353-460)||(25561502-25561607)
chr8 (262-330)||(20003728-20003796)
chr8 (352-460)||(23941097-23941205)
chr8 (345-454)||(8646201-8646309)
chr8 (346-460)||(34048705-34048821)
chr8 (346-458)||(14509983-14510094)
chr8 (346-428)||(30674403-30674485)
chr8 (346-391)||(9108551-9108596)
chr8 (353-392)||(34868184-34868223)
chr8 (261-307)||(33963267-33963313)
chr8 (345-385)||(38009151-38009191)
[»] chr4 (57 HSPs)
chr4 (257-448)||(54780783-54780973)
chr4 (266-448)||(47128993-47129172)
chr4 (274-448)||(38209520-38209692)
chr4 (262-448)||(32915391-32915575)
chr4 (262-448)||(34027585-34027768)
chr4 (262-448)||(34768492-34768675)
chr4 (262-448)||(2790659-2790842)
chr4 (276-448)||(43455463-43455632)
chr4 (262-448)||(37777140-37777324)
chr4 (261-393)||(55255318-55255448)
chr4 (256-448)||(10978906-10979098)
chr4 (262-448)||(16845027-16845210)
chr4 (261-440)||(32128598-32128775)
chr4 (261-448)||(54083159-54083343)
chr4 (261-448)||(48209246-48209437)
chr4 (266-448)||(1105538-1105717)
chr4 (261-450)||(5128757-5128945)
chr4 (261-422)||(17679432-17679590)
chr4 (273-446)||(35465115-35465284)
chr4 (277-458)||(52468282-52468459)
chr4 (262-448)||(19498510-19498691)
chr4 (352-460)||(27112024-27112132)
chr4 (262-442)||(37514671-37514848)
chr4 (253-450)||(10428107-10428308)
chr4 (265-449)||(35779248-35779427)
chr4 (345-460)||(10041998-10042113)
chr4 (345-460)||(24396928-24397043)
chr4 (345-460)||(51691913-51692030)
chr4 (261-436)||(16882312-16882484)
chr4 (352-460)||(36118463-36118571)
chr4 (366-458)||(4167910-4168002)
chr4 (277-460)||(39329325-39329505)
chr4 (262-448)||(40089522-40089714)
chr4 (262-385)||(16922245-16922367)
chr4 (262-410)||(9578575-9578728)
chr4 (265-425)||(51964737-51964897)
chr4 (355-448)||(13460213-13460306)
chr4 (354-458)||(37744916-37745021)
chr4 (352-460)||(36178667-36178774)
chr4 (352-460)||(45656169-45656277)
chr4 (345-460)||(36362869-36362983)
chr4 (352-454)||(2135326-2135428)
chr4 (268-448)||(38352189-38352356)
chr4 (262-392)||(23508427-23508556)
chr4 (345-427)||(39655252-39655334)
chr4 (359-460)||(40217226-40217327)
chr4 (345-448)||(24969443-24969536)
chr4 (262-330)||(24969718-24969786)
chr4 (355-460)||(15735089-15735189)
chr4 (278-334)||(2975358-2975414)
chr4 (360-460)||(29425187-29425287)
chr4 (396-448)||(23509847-23509899)
chr4 (346-389)||(24614018-24614061)
chr4 (345-387)||(30507120-30507162)
chr4 (262-297)||(980360-980395)
chr4 (262-317)||(13460305-13460360)
chr4 (416-448)||(55255275-55255307)
[»] chr3 (38 HSPs)
chr3 (262-448)||(54619121-54619305)
chr3 (262-446)||(38681011-38681193)
chr3 (262-448)||(8073257-8073440)
chr3 (262-448)||(21582775-21582960)
chr3 (262-444)||(36715942-36716123)
chr3 (261-448)||(27078485-27078671)
chr3 (261-448)||(27084282-27084468)
chr3 (261-448)||(50939151-50939335)
chr3 (266-447)||(37168372-37168551)
chr3 (262-448)||(47467688-47467872)
chr3 (262-448)||(43207157-43207339)
chr3 (263-448)||(3953816-3953998)
chr3 (262-448)||(42098805-42098989)
chr3 (262-448)||(34290554-34290738)
chr3 (266-448)||(44708481-44708660)
chr3 (262-448)||(53506802-53506986)
chr3 (265-444)||(36605973-36606149)
chr3 (261-440)||(54407072-54407252)
chr3 (265-448)||(53149235-53149416)
chr3 (345-448)||(9878686-9878789)
chr3 (353-458)||(8420320-8420425)
chr3 (261-448)||(50258541-50258726)
chr3 (274-446)||(18372485-18372658)
chr3 (346-458)||(789930-790042)
chr3 (345-460)||(54574826-54574941)
chr3 (346-460)||(25855414-25855527)
chr3 (345-460)||(42453403-42453511)
chr3 (345-460)||(26279532-26279649)
chr3 (353-454)||(32319162-32319263)
chr3 (346-458)||(49393085-49393195)
chr3 (353-460)||(28689368-28689475)
chr3 (262-324)||(29620364-29620426)
chr3 (268-448)||(48157143-48157310)
chr3 (345-458)||(52374650-52374763)
chr3 (262-330)||(48720429-48720497)
chr3 (379-456)||(29598103-29598179)
chr3 (381-448)||(29620423-29620490)
chr3 (357-410)||(23641329-23641382)
[»] chr1 (43 HSPs)
chr1 (262-448)||(44655753-44655936)
chr1 (261-450)||(6771801-6771990)
chr1 (261-448)||(14146312-14146496)
chr1 (265-450)||(50881440-50881621)
chr1 (262-448)||(5027561-5027746)
chr1 (262-448)||(17168968-17169151)
chr1 (262-448)||(23185439-23185622)
chr1 (268-446)||(16140069-16140244)
chr1 (262-439)||(21740852-21741029)
chr1 (262-448)||(5316692-5316875)
chr1 (261-393)||(27906645-27906775)
chr1 (262-448)||(4971536-4971719)
chr1 (262-448)||(19955729-19955912)
chr1 (262-450)||(40501707-40501893)
chr1 (346-460)||(38547035-38547149)
chr1 (262-448)||(9172940-9173124)
chr1 (262-448)||(9180922-9181106)
chr1 (261-425)||(22865377-22865538)
chr1 (262-448)||(1366797-1366979)
chr1 (265-448)||(13913401-13913583)
chr1 (345-458)||(45758496-45758609)
chr1 (261-447)||(51607357-51607540)
chr1 (262-448)||(3406430-3406614)
chr1 (262-448)||(3440206-3440390)
chr1 (345-448)||(27559649-27559752)
chr1 (262-425)||(6889646-6889805)
chr1 (262-425)||(6891492-6891651)
chr1 (345-460)||(39134720-39134836)
chr1 (279-448)||(41697072-41697238)
chr1 (345-456)||(38853527-38853637)
chr1 (345-458)||(5533314-5533428)
chr1 (346-460)||(26803948-26804059)
chr1 (352-460)||(33170759-33170867)
chr1 (353-458)||(43235774-43235881)
chr1 (346-460)||(6221678-6221791)
chr1 (277-449)||(50146307-50146476)
chr1 (268-330)||(34247154-34247216)
chr1 (345-460)||(10925951-10926067)
chr1 (278-448)||(44895664-44895827)
chr1 (353-435)||(35392295-35392376)
chr1 (345-388)||(17322621-17322664)
chr1 (262-297)||(52127460-52127495)
chr1 (416-448)||(27906786-27906818)
[»] scaffold0070 (1 HSPs)
scaffold0070 (261-448)||(1344-1528)
[»] scaffold0039 (1 HSPs)
scaffold0039 (262-448)||(106539-106723)
[»] scaffold1590 (1 HSPs)
scaffold1590 (345-460)||(257-372)
[»] scaffold0012 (1 HSPs)
scaffold0012 (353-454)||(206496-206597)
[»] scaffold0097 (1 HSPs)
scaffold0097 (352-460)||(38914-39022)
[»] scaffold0018 (1 HSPs)
scaffold0018 (352-456)||(173516-173620)
[»] scaffold0182 (1 HSPs)
scaffold0182 (346-460)||(23993-24107)
[»] scaffold1320 (1 HSPs)
scaffold1320 (353-457)||(1346-1450)
[»] scaffold0022 (2 HSPs)
scaffold0022 (345-458)||(40076-40191)
scaffold0022 (345-458)||(138136-138251)
[»] scaffold0007 (1 HSPs)
scaffold0007 (345-460)||(230858-230973)
[»] scaffold0001 (2 HSPs)
scaffold0001 (262-388)||(183121-183244)
scaffold0001 (399-448)||(181920-181969)
[»] scaffold0003 (1 HSPs)
scaffold0003 (372-457)||(351360-351445)
[»] scaffold0227 (2 HSPs)
scaffold0227 (400-460)||(16016-16076)
scaffold0227 (346-391)||(16123-16168)


Alignment Details
Target: chr7 (Bit Score: 207; Significance: 1e-113; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 20 - 261
Target Start/End: Complemental strand, 43344003 - 43343761
Alignment:
Q  20 gcttgaaatgatcatgacttccattgaatcttcaagcagcaatatgaatctttctaacataaatctctcnnnnnnnn-gtttaaaataaaaaacatagcg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||    
T  43344003 gcttgaaatgatcatgacttccattgaatcttcaagcagcaatatgaatctttctaacataaatctctctttttttttgtttaaaataaaaaacatagcg 43343904  T
Q  119 gtctctttgatttgtacgttcaagttttcaataaagatagagactgtgagagcaatgaggatgatgtttctttatctatcagcttggttaatttattttg 218  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43343903 gtctctttgatttgtacgttcaagttttcaataaagatagagacagtgagagcaatgaggatgatgtttctttatctatcagcttggttaatttattttg 43343804  T
Q  219 tttttagttgttttatatctcaaatatcttgatgacatatacg 261  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43343803 tttttagttgttttatatctcaaatatcttgatgacatatacg 43343761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 18776683 - 18776867
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||  ||||         |||||||||||||||||    
T  18776683 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaa--tataattttttttaaaagagcaatgttcta 18776780  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||| | | |||||||| ||||||||||||||||| ||||    
T  18776781 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacc 18776867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 29077404 - 29077221
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||          |||||||||||||||||    
T  29077404 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 29077308  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||   |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  29077307 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacc 29077221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 20091197 - 20091382
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||          |||| | ||||| ||||    
T  20091197 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaaa-caatgatcta 20091295  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  20091296 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 20091382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 265 - 448
Target Start/End: Original strand, 8171460 - 8171640
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||| | |||          ||||||||||||||||||||    
T  8171460 ggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaagcgtat---tttttttaaaagagcaatgttctattt 8171556  T
Q  365 atattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||| | || ||||||| ||||||||||||||||||||||    
T  8171557 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 8171640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 12596207 - 12596388
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |           ||||||| ||||||||    
T  12596207 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgttttttttt-----aaagagcgatgttcta 12596301  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||||||| | |||||||||| |||||||||| |||||||||||    
T  12596302 tttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacc 12596388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 19692279 - 19692095
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||| ||||| |||||||||| ||||||||||| |||||||||| | ||||||||||||||||||| |||          |||||||||||||||||    
T  19692279 cagggccctccctaagaattcggaagctcggctctggaaatgaaaagtgtccagtgataaaatcaaaacgtat--ttttttttaaaagagcaatgttcta 19692182  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| |||  |||||||||||||||||    
T  19692181 tttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaacc 19692095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 23550988 - 23551172
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||          |||| ||||||| ||||    
T  23550988 cagggtcgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacatat---ttttttaaaaaaagcaatgatcta 23551084  T
Q  362 tttata-ttttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||| |||||||||||||||||| ||||||   |||||||| |||||| | |||||||||||| ||||||||||||||||||||||    
T  23551085 tttatatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 23551172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 345 - 460
Target Start/End: Complemental strand, 7398555 - 7398440
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgagg 7398456  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||||||||||||    
T  7398455 aacctcaaaccaccct 7398440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 10329327 - 10329511
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          |||| ||||||||||||    
T  10329327 cagggccgttcctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat--ttttttaaaaaaaagcaatgttcta 10329424  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| || | ||| |||||||||||| ||||||||||||||||| ||||    
T  10329425 tttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacc 10329511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 261 - 425
Target Start/End: Complemental strand, 26254179 - 26254017
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||| |||||||||||||||||||||||||| ||  |||||||||||| ||||||||||||||||||||||          ||||||||||||||||    
T  26254179 gcagggctgtccctgagaattcggaggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacatat--ttttttttaaaagagcaatgttct 26254082  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaat 425  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||||||| |||| |||||||    
T  26254081 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaat 26254017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 48983755 - 48983945
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnn---aaaagagcaatgt 357  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||             |||| | |||||     
T  48983755 gcagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacgtatttttttttttttaaaaaaaacaatga 48983854  T
Q  358 tctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||| ||||||   |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  48983855 tctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacc 48983945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 261 - 444
Target Start/End: Complemental strand, 28749896 - 28749715
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||| ||||||||||||||||||||  ||||||||||| ||| |||||||||||||||||||          ||||||||||| ||||    
T  28749896 gcagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccaatgataaaatcaaaacatat-ttttttttcaaaagagcaatattct 28749798  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||||||||| ||||||||||||||||||||  |||||||| |||||||  | | |||||||| ||||||||||||||||||    
T  28749797 atttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 38414792 - 38414977
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||| ||||||| |||||||||||||||| ||||| |||||||||||| | ||| ||||||||||||| |||          |||||||||| |||||    
T  38414792 gcagggtcgtccctaagaattcggaggctcgactctggaaatgaaaagagactagtcataaaatcaaaacgtat--ttttttgcaaaagagcaacgttct 38414889  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||| |||||||||||||||||||| ||||||   ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  38414890 atttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaacc 38414977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 264 - 448
Target Start/End: Complemental strand, 8239869 - 8239688
Alignment:
Q  264 gggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatt 363  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||| |||          ||||||| |||||||||||    
T  8239869 gggccgtccctaagaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacgtat---tttttttaaaagagtaatgttctatt 8239773  T
Q  364 tatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||| ||||||| || ||||  ||||||||||||||||| ||| |||||||| | ||||||||| ||||||||||    
T  8239772 tatattttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacc 8239688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 24525598 - 24525786
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaa-aagagcaatgttc 359  Q
    |||||| ||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||||||| |||             || | ||||||||    
T  24525598 gcagggtcgtccctaagaattcggaggctcggctctgggaatgaaaagaggcctgtgataaaatcaaaacgtattttttttttttttaaaaacaatgttc 24525697  T
Q  360 tatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||| |||||||  | |||||| |||||||| ||| |||||||| ||||||||||||||||||||||    
T  24525698 tatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 24525786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 47984884 - 47985071
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||| ||||||||  ||||||||||||  |||||||||| |||||||||||||||||||| | |          |||| |||||||||||    
T  47984884 gcagggccgtccctaagaattcgttggctcggctctgggaatgaaaagatgccagtgataaaatcaaaacgtgttttttttttaaaaa-agcaatgttct 47984982  T
Q  361 atttatatttt-ttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||| |||||||| ||||| |||||||  |||||||| |||||||| |||||||||||| || |||||||||||||||||||    
T  47984983 atttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaacc 47985071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 27237421 - 27237536
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||   |||||||||| |  | ||||||||||||||||||| |||||||||||||    
T  27237421 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgagg 27237520  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||||||||||||    
T  27237521 aacctcaaaccaccct 27237536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 25010611 - 25010434
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||          |||| ||||||| ||||    
T  25010611 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacgtat-tttttaaaaaaaaaagcaatgatcta 25010513  T
Q  362 tttata--ttttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||  |||||||||||||||||| ||||||          | |||||||| |||||||||||| ||||||||||||||||||||||    
T  25010512 tttatattttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 25010434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 346 - 460
Target Start/End: Original strand, 9021799 - 9021912
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| |||| | ||||||| |||||||||||||||||||||| ||||  |||||||| |||||||| |||||||||||||||||||||||||||||||     
T  9021799 aaagaacaatttgctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagg- 9021897  T
Q  446 acctcaaaccaccct 460  Q
    |||||||||||||||    
T  9021898 acctcaaaccaccct 9021912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 261 - 448
Target Start/End: Complemental strand, 10955672 - 10955485
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||| |||| ||||||||||||||||| |||| |  |||||| ||||| ||||||| ||||||||   | |          |||||||| |||||||    
T  10955672 gcagggctgtccatgagaattcggaggctcagctcggggaatgaatagaggtcagtgattaaatcaaattttttttttttttttaaaagagcgatgttct 10955573  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||| |||||||  |||||||| |||||||  | |||||||||| ||||||||||||||||||||||    
T  10955572 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaggaacc 10955485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 18201234 - 18201126
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    ||||| |||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||||| ||||||||||  |||| || |||||||||||||||    
T  18201234 caatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacctca 18201135  T
Q  452 aaccaccct 460  Q
    |||||||||    
T  18201134 aaccaccct 18201126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 353 - 460
Target Start/End: Complemental strand, 12981422 - 12981315
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    |||||||||||||  |||||||||||||||||||||||| | ||||||| | |||||||  |||||||||||||||||| ||||| ||||||||||||||    
T  12981422 aatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacctcaa 12981323  T
Q  453 accaccct 460  Q
    ||||||||    
T  12981322 accaccct 12981315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 345 - 454
Target Start/End: Original strand, 2611260 - 2611369
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||   |||||||| |||||||  || |||||||||||| || ||||||||||||    
T  2611260 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgagg 2611359  T
Q  445 aacctcaaac 454  Q
    ||||||||||    
T  2611360 aacctcaaac 2611369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 353 - 460
Target Start/End: Complemental strand, 23859169 - 23859062
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    ||||||||||||| |||||||||||||||||||||| || |  |||||||| | |||||| |||| ||||||| ||||||||||||||||||| ||||||    
T  23859169 aatgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgaggatcctcaa 23859070  T
Q  453 accaccct 460  Q
    ||||||||    
T  23859069 accaccct 23859062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 346 - 425
Target Start/End: Original strand, 33162338 - 33162417
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaat 425  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  33162338 aaagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaat 33162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 353 - 456
Target Start/End: Complemental strand, 36891674 - 36891571
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    |||||||||||||||||||||||| ||| ||||||| |||   |||||||  |||||| | |||||||||||||||||||||||||||||||||||||||    
T  36891674 aatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 36891575  T
Q  453 acca 456  Q
    ||||    
T  36891574 acca 36891571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 346 - 460
Target Start/End: Original strand, 6765680 - 6765794
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||   |||||| |  ||||| | |||||||||||||||||||||||| | ||| |    
T  6765680 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtatataagagta 6765779  T
Q  446 acctcaaaccaccct 460  Q
    |||||||||||||||    
T  6765780 acctcaaaccaccct 6765794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 12419493 - 12419608
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||||||||||||||||| || |  ||||| |||| |||| | |||| ||||||||||||  | ||||||||||    
T  12419493 aaaagaacaatgttctatttaaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgagg 12419592  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||||||||||||    
T  12419593 aacctcaaaccaccct 12419608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 347 - 445
Target Start/End: Original strand, 36902924 - 36903022
Alignment:
Q  347 aagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    |||| |||||||||||||| ||||||||| ||||||||||||| ||   ||||||||| |||||||||||||||||||||| ||| |||||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 345 - 437
Target Start/End: Complemental strand, 23744900 - 23744808
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtata 437  Q
    |||||| |||||||||| ||| |||||||||||||||||||||||||||   ||||||| ||||||||||||| | |||||||||||||||||    
T  23744900 aaaagaacaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 460
Target Start/End: Complemental strand, 20153297 - 20153190
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    |||||| |||||| |||||||||||||||||||||| |||   |||||||| | || ||| |||| ||||||||||| |||||||||||||| | |||||    
T  20153297 aatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagggatctcaa 20153198  T
Q  453 accaccct 460  Q
    ||||||||    
T  20153197 accaccct 20153190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 128 - 261
Target Start/End: Complemental strand, 43338914 - 43338774
Alignment:
Q  128 atttgtacgttcaagttttcaataaagata----gagactgtgagagcaatgaggatgatgtttctttatctatcagcttggttaatttattttgttttt 223  Q
    ||||||||||||||||||||||||||||||    ||||| ||||  ||||||| |||||||||||||||||||||||  |  ||  ||||||||||||||    
T  43338914 atttgtacgttcaagttttcaataaagatatatagagacagtgacggcaatgacgatgatgtttctttatctatcag-atcattggtttattttgttttt 43338816  T
Q  224 ag---ttgttttatatctcaaatatc-ttgatgacatatacg 261  Q
    ||   ||||||||| ||||||| ||| |||||||||||||||    
T  43338815 agtaattgttttatgtctcaaacatctttgatgacatatacg 43338774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 369 - 447
Target Start/End: Complemental strand, 38971333 - 38971255
Alignment:
Q  369 tttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaac 447  Q
    ||||||||||||||||||||||||   |||||||||  |||||||||| |||||||||||||||||| ||| |||||||    
T  38971333 tttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgaggaac 38971255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 330
Target Start/End: Original strand, 40357303 - 40357365
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 330  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  40357303 cgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaac 40357365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 361 - 453
Target Start/End: Original strand, 23020498 - 23020589
Alignment:
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaa 453  Q
    ||||| ||||||||||||||||||| ||||||   ||||||||    ||||  |||||||||||||||||||||||||||||||||| |||||    
T  23020498 atttagattttttaaaagataaatataaggtgttgtatatatgcac-acactcaaaggtgaaaatcactaccgtatacatgaggaacttcaaa 23020589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 414 - 460
Target Start/End: Original strand, 9014829 - 9014875
Alignment:
Q  414 aaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 460  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||    
T  9014829 aaaggtgaaaatcactaccgtatacatgagtaacctcaaatcaccct 9014875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 396 - 458
Target Start/End: Original strand, 17800270 - 17800332
Alignment:
Q  396 tatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccacc 458  Q
    ||||||||| ||||||| ||| ||||||||||||||||||| |||||||||  ||||||||||    
T  17800270 tatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgaggaatttcaaaccacc 17800332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 432
Target Start/End: Original strand, 21763586 - 21763672
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactacc 432  Q
    ||||| || ||||||||||| |||||||||||||||||||||| ||    |||||||| | |||||| ||| |||||||||||||||    
T  21763586 aaagaacattgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcactacc 21763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 43339004 - 43338956
Alignment:
Q  20 gcttgaaatgatcatgacttccattgaatcttcaagcagcaatatgaat 68  Q
    |||||| |||||||||||| ||||||||||||||  |||||||||||||    
T  43339004 gcttgagatgatcatgactaccattgaatcttcattcagcaatatgaat 43338956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 9014177 - 9014219
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaa 388  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||    
T  9014177 aaagaacaatgttttatttaaattttttaaaagataaatacaa 9014219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 428
Target Start/End: Original strand, 26917728 - 26917788
Alignment:
Q  368 ttttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcac 428  Q
    |||||||||||| ||||||||| ||   |||||||||| |||| ||||| |||||||||||    
T  26917728 ttttttaaaagaaaaatacaagatgacgtatatatgtgatacatctaaatgtgaaaatcac 26917788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 1e-63; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 27079197 - 27079012
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||          |||||||||||||||||    
T  27079197 cagggccgtccctgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtat-tttttttttaaaagagcaatgttcta 27079099  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||    
T  27079098 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacc 27079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 270 - 448
Target Start/End: Original strand, 34756289 - 34756465
Alignment:
Q  270 tccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatatt 369  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||    
T  34756289 tccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata--attttttttaaaagagcaatgttctatttatatt 34756386  T
Q  370 ttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  34756387 ttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 34756465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 261 - 450
Target Start/End: Original strand, 36187794 - 36187980
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| | |          |||||||| |||||||    
T  36187794 gcagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgttt---tttttttaaaagagcgatgttct 36187890  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctc 450  Q
    ||||||||||||||||| |||||||||||||||  |||||||| |||||||| | |||||||||| ||||||||||||||||| ||||||    
T  36187891 atttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctc 36187980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 15480006 - 15480188
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||           ||||| | ||||||||    
T  15480006 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacatat----tttttttaaagaccgatgttcta 15480101  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||| ||   |||||||| |||||||| | |||||||||| |||||||||| |||||||||||    
T  15480102 tttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacc 15480188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 16591990 - 16592173
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||          |||||||||||||||||    
T  16591990 cagggccgtccttgagaatttggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacatat---tttttttaaaagagcaatgttcta 16592086  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||| ||||||||||||||| ||||   |||||||| |||||||| | |||||||||| ||||||||||| ||||||||||    
T  16592087 tttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacc 16592173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 262 - 444
Target Start/End: Original strand, 31194528 - 31194706
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||||| |||          |||||||||||||||||    
T  31194528 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtat---ttcttttaaaagagcaatgttcta 31194624  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||| ||| | |||||||||| ||||||||||||||||||    
T  31194625 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 38869279 - 38869462
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||| |||| ||||||||||||| |||          |||||||||||||||||    
T  38869279 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggtcagttataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 38869375  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||||   |||||||| |||||||| |||||||||||| ||||||||||||||||| ||||    
T  38869376 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 38869462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 261 - 448
Target Start/End: Complemental strand, 9364477 - 9364292
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||  |||| ||||||||||||||| ||||||  ||||||||||||||||||||||||||||||| |||          |||||  |||||||||    
T  9364477 gcagggccacccctaagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaaag--caatgttct 9364380  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||| |||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  9364379 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 9364292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 16198709 - 16198893
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          |||||  ||||||||||    
T  16198709 cagggccttccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaaag--caatgttcta 16198806  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||||   |||||||| | |||||| |||||||||||| ||||||||||||||||||||||    
T  16198807 tttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacc 16198893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 22986473 - 22986657
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||           |||||||||||||||||    
T  22986473 cagggccgtccgtgagaattcggaggctcagctctgagaatgaaaagaggccagtgataaaatcaaaacgta--attttttttaaaagagcaatgttcta 22986570  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    || ||||||||||||||| |||||||| |||   |||||||| |||||||| | |||||||||| ||||||||||||||||| ||||    
T  22986571 ttaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaacc 22986657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 266 - 448
Target Start/End: Complemental strand, 19523380 - 19523200
Alignment:
Q  266 gccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattta 365  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | |           |||||||  |||||||||||    
T  19523380 gccgtccctgagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtgtttttttttt--aaagagcggtgttctattta 19523283  T
Q  366 tattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||| |||||| |||||||||||||||    
T  19523282 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacc 19523200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 267 - 448
Target Start/End: Complemental strand, 2275070 - 2274891
Alignment:
Q  267 ccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttat 366  Q
    |||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||| |||          |||||||| |||||||||||||    
T  2275070 ccgtccctgagaattcggaggctcggttctgggaatgaaaagaggccagtgataaaatcaaaacgtat--ttttttttaaaagagcgatgttctatttat 2274973  T
Q  367 attttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||    ||||||||  ||||||| | |||||||||| ||||||||||||| ||||||||    
T  2274972 attttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacc 2274891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 16799239 - 16799426
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaa-tgttc 359  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||| | |||||||||||||||||| |||          ||||||| || |||||    
T  16799239 gcagggccgtccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaaaacgtat-tttttttttaaaagagtaaatgttc 16799337  T
Q  360 tatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||| ||||||| |||||||  |||||||| |||||||| |||||||||||| | ||||||||||||||||||||    
T  16799338 tatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacc 16799426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 263 - 448
Target Start/End: Original strand, 28822253 - 28822441
Alignment:
Q  263 agggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnn---aaaagagcaatgttc 359  Q
    |||||||||||| |||||||||||| |||||| ||  ||||||||||||  ||||||||||||||||| |||             |||||||||||||||    
T  28822253 agggccgtccctaagaattcggaggttcggctttgggaatgaaaagaggttagtgataaaatcaaaacgtattttttttttttttaaaagagcaatgttc 28822352  T
Q  360 tatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||| |||||||  |||||||| |||||||| |||||||||||| |||||||||||||||| |||||    
T  28822353 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacc 28822441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 265 - 448
Target Start/End: Complemental strand, 30854511 - 30854330
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||||| |||| |||||||||||||||  |||||||| ||| ||| |||||||| ||||| |||          ||||||||||||||||||||    
T  30854511 ggccgtccctgataatttggaggctcggctctgggaatgaaaaaaggtcagcgataaaattaaaacgtat--ttttttttaaaagagcaatgttctattt 30854414  T
Q  365 atattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||  | |||||||||| |||| |||||||||||||||||    
T  30854413 atattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacc 30854330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 345 - 460
Target Start/End: Complemental strand, 34426007 - 34425892
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||  |||||||||| ||||||||||| | ||||||| ||||||||||||||||    
T  34426007 aaaagaacaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgagg 34425908  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||||||||||||    
T  34425907 aacctcaaaccaccct 34425892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 36868872 - 36868987
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||   ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgagg 36868971  T
Q  445 aacctcaaaccaccct 460  Q
    || |||||||||||||    
T  36868972 aatctcaaaccaccct 36868987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 262 - 447
Target Start/End: Complemental strand, 27924267 - 27924084
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||  || ||||||||| |||||| |||||| ||||||||||||||||||||||||||||||| |||          |||| |||||||  |||    
T  27924267 cagggccgtttctaagaattcgggggctcgactctgagaatgaaaagaggccagtgataaaatcaaaacgtat--ttttttaaaaaaaagcaatgaccta 27924170  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaac 447  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||| | |||||| ||||| |||||||||||||||||||||    
T  27924169 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaac 27924084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 346 - 460
Target Start/End: Original strand, 14318382 - 14318496
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||   |||||||||| |||| | |||  |||||||||||||||||||||||||||    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgagga 14318481  T
Q  446 acctcaaaccaccct 460  Q
    |||||||||||||||    
T  14318482 acctcaaaccaccct 14318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 262 - 444
Target Start/End: Complemental strand, 7671118 - 7670929
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnn------aaaagagcaat 355  Q
    ||||||||||| | ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||                |||| ||||||    
T  7671118 cagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaaaaaaagcaat 7671019  T
Q  356 gttctatttatatttttt-aaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||||||||||||||| |||||||||||| |||||||  ||||| |  |||||||| |||||||||||| ||||||||||||||||||    
T  7671018 gttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgagg 7670929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 1366522 - 1366637
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||| |||||||||||||| ||   |||||||| | |||||||||| |||||||||||||||||||| ||||||    
T  1366522 aaaagaacaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgagg 1366621  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||| ||||||||    
T  1366622 aacctcataccaccct 1366637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 345 - 456
Target Start/End: Original strand, 2024638 - 2024749
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||| |||||||||||||| ||||  |||||||||| |||||| |||| |||||||||||||| |||||||||||    
T  2024638 aaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgagg 2024737  T
Q  445 aacctcaaacca 456  Q
    | ||||||||||    
T  2024738 atcctcaaacca 2024749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 345 - 458
Target Start/End: Complemental strand, 33037884 - 33037771
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||| |    ||||||||| ||||||| ||||||||||| || ||||||||||||||||    
T  33037884 aaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgagg 33037785  T
Q  445 aacctcaaaccacc 458  Q
    ||||||||||||||    
T  33037784 aacctcaaaccacc 33037771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 460
Target Start/End: Original strand, 40794257 - 40794438
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaa 376  Q
    ||||||||||||||||||||| || |||||||||||  || ||||||| ||||| | |          |||||| ||||||| |||||| ||||||||||    
T  40794257 gaattcggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgttt--ttttttttaaaagaacaatgttttatttaaattttttaaa 40794354  T
Q  377 agataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 460  Q
    ||| |||||||| | ||  || |||| || |||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  40794355 agacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaaacctcaaaccaccct 40794438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 353 - 460
Target Start/End: Original strand, 2530901 - 2531008
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    |||||||||||||  ||||||||||||||||||||| |||   |||||||  |||||| | |||||||||||||||||| ||||||||||||||||||||    
T  2530901 aatgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacctcaa 2531000  T
Q  453 accaccct 460  Q
    ||||||||    
T  2531001 accaccct 2531008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 346 - 425
Target Start/End: Complemental strand, 7338102 - 7338023
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaat 425  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||    
T  7338102 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaat 7338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 11242314 - 11242429
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| ||||||||||||||  |||||||||||||||||||||  ||   |||||||||| |||| | |||| || |||||||||||||||||||||||    
T  11242314 aaaagaacaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgagg 11242413  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||||||||||||    
T  11242414 aacctcaaaccaccct 11242429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 23284058 - 23284161
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||   |||||||| |||||||| |||| ||||||| ||||||||||||||||||    
T  23284058 aaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgagg 23284157  T
Q  445 aacc 448  Q
    ||||    
T  23284158 aacc 23284161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 262 - 444
Target Start/End: Original strand, 31881348 - 31881528
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||| ||||  ||||||||||||||  ||||||||| || |||| ||||||||||||| | |          |||||||||||||||||    
T  31881348 cagggccgtccctgaaaatttagaggctcggctctgggaatgaaaagtggtcagtaataaaatcaaaacgttt-tttttttttaaaagagcaatgttcta 31881446  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||||||||||||||||||||||| |||||  |||||||| || ||| | | || ||||||| ||||||||||||||||||    
T  31881447 tttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgagg 31881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 346 - 460
Target Start/End: Complemental strand, 2412191 - 2412077
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| ||||||||||| |||||||||| |||   |||||||| | | || | ||| |||||||||||||| |||||||||||||    
T  2412191 aaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgagga 2412092  T
Q  446 acctcaaaccaccct 460  Q
    |||||||||||||||    
T  2412091 acctcaaaccaccct 2412077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 40389537 - 40389635
Alignment:
Q  350 agcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||||||| ||||||   |||||||| |||||| | |||||||||||| ||||||||||  ||||||||||    
T  40389537 agcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaacc 40389635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 458
Target Start/End: Complemental strand, 10407565 - 10407452
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||||||   || |||||| ||||| ||||| |||||||| |||||||||| |||||||    
T  10407565 aaaagaacaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgagg 10407466  T
Q  445 aacctcaaaccacc 458  Q
    || ||| |||||||    
T  10407465 aatctccaaccacc 10407452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 347 - 458
Target Start/End: Original strand, 22648734 - 22648845
Alignment:
Q  347 aagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaa 446  Q
    |||| |||||||||||||| |||||||||||||||||||||| |||   ||||||||||| ||| | |||||||| ||||||||| ||||| || || ||    
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtataaataagaaa 22648833  T
Q  447 cctcaaaccacc 458  Q
    ||||||||||||    
T  22648834 cctcaaaccacc 22648845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 460
Target Start/End: Complemental strand, 10543769 - 10543663
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    ||||||| | ||| ||||||||||||||||||| ||||||   |||||||| | |||| | ||||||||||||||||||||||||||| ||||| |||||    
T  10543769 aatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat-aggaatctcaa 10543671  T
Q  453 accaccct 460  Q
    ||||||||    
T  10543670 accaccct 10543663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 460
Target Start/End: Complemental strand, 24395835 - 24395728
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    ||||||||||||| ||||||||||||||||||||||||||   |||||||    |||| | ||||||||||||||| |||||||| ||||||||| | ||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaactttaa 24395736  T
Q  453 accaccct 460  Q
    ||||||||    
T  24395735 accaccct 24395728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 353 - 445
Target Start/End: Original strand, 26718953 - 26719045
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||||||||||| | |||||||||||||||||||| |||   |||||||| | |||||  |||||||||||||||||||| |||||||||||    
T  26718953 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26719045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 353 - 445
Target Start/End: Original strand, 26988697 - 26988789
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||||||||||| | |||||||||||||||||||| |||   |||||||| | |||||  |||||||||||||||||||| |||||||||||    
T  26988697 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26988789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 460
Target Start/End: Original strand, 41911614 - 41911728
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| |||||||| | |||  |||||||||||| ||||||||||||   |||||| | |||||||| ||| || |||||||||| |||||| |||||||    
T  41911614 aaagaacaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgagga 41911713  T
Q  446 acctcaaaccaccct 460  Q
    |||||||| ||||||    
T  41911714 acctcaaatcaccct 41911728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 23283943 - 23284011
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 330  Q
    ||||||||||||||||||||| ||||||| | | |   |||||||||||||||||||||||||||||||    
T  23283943 cagggccgtccctgagaattcagaggctcagttttaggaatgaaaagaggccagtgataaaatcaaaac 23284011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 606258 - 606211
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtg 392  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||    
T  606258 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtg 606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 458
Target Start/End: Complemental strand, 17345053 - 17344947
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    |||||||||||||| |||||||| |  ||||||||||| ||  || |||||| |||||||| |||| | ||||| |||||||||| ||  | ||||||||    
T  17345053 caatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtatccacaaagaacctca 17344954  T
Q  452 aaccacc 458  Q
    |||||||    
T  17344953 aaccacc 17344947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 327
Target Start/End: Original strand, 40389452 - 40389518
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaa 327  Q
    |||||| | ||||| ||||||||||||||||||||||  |||||||||| | |||||||||||||||    
T  40389452 gcagggtcatccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaa 40389518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 457
Target Start/End: Complemental strand, 15639724 - 15639635
Alignment:
Q  368 ttttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccac 457  Q
    |||||| ||||||||||||||||||   |||||||| | |||| | |||| |||||||||||  ||||||||| |||||||| |||||||    
T  15639724 tttttttaaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaaccttaaaccac 15639635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 27530587 - 27530543
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaag 389  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||    
T  27530587 aaaagaacaatgttctatttaaattttttaaaagattaatacaag 27530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 388
Target Start/End: Complemental strand, 22875039 - 22875003
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaa 388  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  22875039 caatattctatttaaattttttaaaagataaatacaa 22875003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 35080766 - 35080806
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaata 385  Q
    |||||| ||||||| |||||| |||||||||||||||||||    
T  35080766 aaaagaacaatgttttatttaaattttttaaaagataaata 35080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 121; Significance: 9e-62; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 13727317 - 13727501
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||    
T  13727317 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata--attttttttaaaagagcaatgttcta 13727414  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  13727415 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13727501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 261 - 448
Target Start/End: Complemental strand, 21479684 - 21479498
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |         ||||||||||||||||    
T  21479684 gcagggccgtctctgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata-atttttttttaaaagagcaatgttct 21479586  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  21479585 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 21479498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 262 - 447
Target Start/End: Complemental strand, 21280733 - 21280550
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||    
T  21280733 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata--attttttttaaaagagcaatgttcta 21280636  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaac 447  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||| ||||| |||||||||||||||||||||    
T  21280635 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaac 21280550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 263 - 448
Target Start/End: Complemental strand, 33774305 - 33774121
Alignment:
Q  263 agggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctat 362  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |         ||||||| ||||||||||    
T  33774305 agggccatccttgagaattcggaggctcggctctgaaaatgaaaagaggccagtaataaaatcaaaacata-atttttttttaaaagagtaatgttctat 33774207  T
Q  363 ttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||| ||| |||||||| ||||||||||||||||||||||    
T  33774206 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacc 33774121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 27788608 - 27788790
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          ||||||||||| |||||    
T  27788608 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat----ttttttaaaagagcaattttcta 27788703  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  27788704 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 27788790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 20711638 - 20711822
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||||||| |||| ||||||||||||| |||          |||||||||||||||||    
T  20711638 cagggacgtccctgagaattcggaggctcggttctgggaatgaaaagaggtcagtcataaaatcaaaacgtat--ttttttttaaaagagcaatgttcta 20711735  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  20711736 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 20711822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 30832442 - 30832626
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||| |||          ||||| || |||||||    
T  30832442 gcagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat---ttttttaaaaagcgcgatgttct 30832538  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||| ||||||||||| ||||||||||| |||  ||||||||||||||||| | || ||||||| |||||||||| |||||||||||    
T  30832539 atttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacc 30832626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 19737612 - 19737794
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||| |||||||||||||| | ||| |||||||| |  |||||||||||||||||||||||||||||  | |          |||||||||||||||||    
T  19737612 cagggtcgtccctgagaatttgaaggttcggctct-aggatgaaaagaggccagtgataaaatcaaaatgttt---tttttttaaaagagcaatgttcta 19737707  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||| |||||||||||||||||||  |||||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  19737708 tttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacc 19737794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 24710914 - 24711101
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnna-aaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||| |||| |  ||||||||||||  ||||||||||||||||| | |            ||||||  |||||||    
T  24710914 cagggccgtccctgagaattcggaggctcagctcagggaatgaaaagaggttagtgataaaatcaaaacgtttttttttttttttaaagagtgatgttct 24711013  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||  | |||||||||| ||||||||||||||||||||||    
T  24711014 atttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacc 24711101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 17354142 - 17353958
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||||||||||||| ||||   |||||||||||| |||||||||||||||||| |||          |||| ||||||||||||    
T  17354142 cagggccgtccctaagaattcggaggctcgactcttggaatgaaaagaggtcagtgataaaatcaaaacgtat--tttttttaaaaaaagcaatgttcta 17354045  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||||   |||||||| |||||||| ||| |||||||| |||| ||||||||||| |||||    
T  17354044 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacc 17353958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 261 - 425
Target Start/End: Original strand, 27314096 - 27314258
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||| |||||||||||||| |||||  ||||||||||||||||||||||||||||||| |||          ||||||||||||||||    
T  27314096 gcagggccgtccctgaaaattcggaggctcgactctgggaatgaaaagaggccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttct 27314192  T
Q  361 atttatatttttt-aaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaat 425  Q
    ||||||||||||| ||||||||||||||||||||  |||||||| |||||||  | ||||||||||    
T  27314193 atttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaat 27314258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 276 - 448
Target Start/End: Complemental strand, 28075960 - 28075787
Alignment:
Q  276 agaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnna-aaagagcaatgttctatttatatttttta 374  Q
    |||||| |||||||||||||||  ||||||||||||||||||| ||||||||||| |||            ||| |||||||||||||||||||||||||    
T  28075960 agaatttggaggctcggctctgggaatgaaaagaggccagtgaaaaaatcaaaacgtattttttttattttaaaaagcaatgttctatttatatttttta 28075861  T
Q  375 aaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||| |||||||  |||||||| | |||||| |||||||||||| ||||||||||||||||||||||    
T  28075860 aaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacc 28075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 2477590 - 2477698
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    |||||||| ||||| ||||||||||||||||||||||||||  ||||||||| | |||||| ||| ||||||||||||||||||||||||||||||||||    
T  2477590 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 2477689  T
Q  452 aaccaccct 460  Q
    |||||||||    
T  2477690 aaccaccct 2477698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 264 - 444
Target Start/End: Original strand, 1155767 - 1155947
Alignment:
Q  264 gggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatt 363  Q
    ||||||||||| | |||| |||||||||| |||   |||||||||||| |||||||||||||||||  ||            ||||||||||||||||||    
T  1155767 gggccgtccctaaaaatttggaggctcggttctaggaatgaaaagaggtcagtgataaaatcaaaaagtaatttttttttttaaagagcaatgttctatt 1155866  T
Q  364 tatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||| | | |||||||||| ||||||||||||||||||    
T  1155867 tatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 345 - 450
Target Start/End: Complemental strand, 34397964 - 34397859
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||| ||||| |||| |||| ||||||||    
T  34397964 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgagg 34397865  T
Q  445 aacctc 450  Q
    ||||||    
T  34397864 aacctc 34397859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 357 - 459
Target Start/End: Original strand, 21183686 - 21183788
Alignment:
Q  357 ttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaacca 456  Q
    ||||||||| |||||||||||||||||||||| ||    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacctcaaacca 21183785  T
Q  457 ccc 459  Q
    |||    
T  21183786 ccc 21183788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 6159538 - 6159430
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    ||||||||||||||||||||||||||||||||||||| |||   |||||||| ||||||   ||||||| |||||||||||||||| || ||||||||||    
T  6159538 caatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacctca 6159439  T
Q  452 aaccaccct 460  Q
    |||||||||    
T  6159438 aaccaccct 6159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 270 - 448
Target Start/End: Original strand, 235151 - 235328
Alignment:
Q  270 tccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatatt 369  Q
    ||||| |||||||||||| |||||| ||| ||||||||||| ||||||||||||||||||| |||           ||| ||||||| ||||||||||||    
T  235151 tccctaagaattcggaggttcggctatgagaatgaaaagagaccagtgataaaatcaaaacgtat---ttttttttaaaaagcaatgatctatttatatt 235247  T
Q  370 ttttaaaagataaatacaaggtgc--aatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||| |||||||    |||||||   ||||||| |||| ||||||| ||||||||||||||||| ||||    
T  235248 ttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacc 235328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 369 - 460
Target Start/End: Complemental strand, 4037031 - 4036940
Alignment:
Q  369 tttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 460  Q
    ||||||| |||||||||||||||||  ||||||| ||||||||| |||||| || |||||||||||||| ||||||||| ||||||||||||    
T  4037031 tttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaacttcaaaccaccct 4036940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 460
Target Start/End: Complemental strand, 20611889 - 20611782
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    ||||||||| ||| |||||||||| |||||||||||||||   |||||||  |  ||| | |||||||||||||||||||||||||||||||||||||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacctcaa 20611790  T
Q  453 accaccct 460  Q
    || |||||    
T  20611789 actaccct 20611782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 346 - 431
Target Start/End: Complemental strand, 30121868 - 30121783
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactac 431  Q
    ||||| ||||||| |||||| ||||||||||| ||||||||||||||  ||||||||| | |||| | ||||||||||||||||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 19987330 - 19987277
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataa 321  Q
    ||||||| |||||||||||| |||||||| | |||||||||||| |||||||||    
T  19987330 cgtccctaagaattcggaggatcggctctcagaatgaaaagaggtcagtgataa 19987277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 405 - 446
Target Start/End: Complemental strand, 27994816 - 27994775
Alignment:
Q  405 ggtacacctaaaggtgaaaatcactaccgtatacatgaggaa 446  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  27994816 ggtacactcaaaggtgaaaatcactaccgtatacatgaggaa 27994775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 313
Target Start/End: Complemental strand, 20611960 - 20611924
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggcc 313  Q
    ||||||||||||||||||||| || ||||||||||||    
T  20611960 gaattcggaggctcggctctgtaagtgaaaagaggcc 20611924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 3e-61; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 12337365 - 12337550
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| |         |||||||||||||||||    
T  12337365 cagggccgtccctgagaattcgaaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatata-atttttttttaaaagagcaatgttcta 12337463  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  12337464 tttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 12337550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 4506078 - 4505894
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||    
T  4506078 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata--attttttttaaaagagcaatgttcta 4505981  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||| ||||| ||||||||||||||||||||||    
T  4505980 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 4505894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 3155401 - 3155217
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||| ||||||||           |||||||||||||||||    
T  3155401 cagggccgtccctgagaattcggaggctcggctttaaaaatgaaaagaggtcagtgataaaattaaaacata--attttttttaaaagagcaatgttcta 3155304  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  3155303 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacc 3155217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 265 - 448
Target Start/End: Complemental strand, 6965186 - 6965007
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    ||         ||||||||||||||||||||    
T  6965186 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa----taattttttttaaaagagcaatgttctattt 6965091  T
Q  365 atattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  6965090 atattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 6965007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 8906996 - 8907181
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |         ||||||| |||||||||    
T  8906996 cagggccgttcctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacata-atttttttttaaaagagtaatgttcta 8907094  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||| ||  |||||||| |||||||| | |||| ||||| ||||||||||||||||| ||||    
T  8907095 tttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacc 8907181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 262 - 447
Target Start/End: Original strand, 27506659 - 27506841
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||          |||| ||||||| ||||    
T  27506659 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtat---tttttaaaaaaaagcaatgatcta 27506755  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaac 447  Q
    |||||||||||||||||||||||| |||||||  ||||||||||||||||| |||||| ||||| ||||| |||||||||||||||    
T  27506756 tttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaac 27506841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 24410623 - 24410437
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||| | ||  ||||||||||||||||||||||||||||||| |||           ||| | ||||||||||    
T  24410623 cagggccgtccctaagaattcggaggctcggttttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaacaatgttcta 24410524  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  24410523 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 24410437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 29939781 - 29939964
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||| ||||||||||||||||| |||||||||||||  ||| |||||||| |||||||||||||||||| |||          |||||||||||||||||    
T  29939781 caggaccgtccctgagaattcgaaggctcggctctgggaataaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 29939877  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||| |||||||||||||||||   |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  29939878 tttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 29939964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 448
Target Start/End: Original strand, 10762488 - 10762667
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||| |||||| |||||||| ||||||  ||||||||||||||||||||||||| ||||| | |           |||||||||||||||||||    
T  10762488 ggccgtccctaagaatttggaggctcagctctgggaatgaaaagaggccagtgataaaattaaaacgtttttttttt----aaagagcaatgttctattt 10762583  T
Q  365 atattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||| |||||||  ||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  10762584 atattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 10762667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 26716313 - 26716128
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||  ||||||||| ||  |||||||||||| |||||||||||||||||| |||          |||||||||||||||||    
T  26716313 cagggccgtccctaagaattcgttggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacgtat--ttttttttaaaagagcaatgttcta 26716216  T
Q  362 tttatatttttt-aaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||| |||||||||||| ||||||| ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  26716215 tttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 26716128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 265 - 432
Target Start/End: Complemental strand, 34694155 - 34693991
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||| |||||||||||||||| |||          ||||||||||||||||||||    
T  34694155 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtat---tttttttaaaagagcaatgttctattt 34694059  T
Q  365 atattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactacc 432  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| | |||| ||||| ||||||    
T  34694058 atattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34693991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 265 - 432
Target Start/End: Complemental strand, 34716567 - 34716403
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||| |||||||||||||||| |||          ||||||||||||||||||||    
T  34716567 ggccgtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtat---tttttttaaaagagcaatgttctattt 34716471  T
Q  365 atattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactacc 432  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| | |||| ||||| ||||||    
T  34716470 atattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34716403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 261 - 422
Target Start/End: Complemental strand, 40636322 - 40636164
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||| ||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||          ||||||||||||||||    
T  40636322 gcagagccgtccctgagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacatat---tttttttaaaagagcaatgttct 40636226  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaa 422  Q
    ||||||||||||||||||||||||||||||||   |||||||| |||||||| | |||||||    
T  40636225 atttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 9046213 - 9046029
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||  ||||||||  ||||| ||||||  ||| ||||||||||||||||||||||||||| |||          |||||| ||||||||||    
T  9046213 cagggccgtcccaaagaattcgttggctcagctctgggaattaaaagaggccagtgataaaatcaaaacgtat---tgtttttaaaagaacaatgttcta 9046117  T
Q  362 tttatatttttt-aaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||| |||||||||||| |||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  9046116 tttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 9046029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 345 - 458
Target Start/End: Complemental strand, 16097111 - 16096998
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||  ||||||||  ||||||| |||||||||||| |||||| |||||||||||    
T  16097111 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgagg 16097012  T
Q  445 aacctcaaaccacc 458  Q
    ||||||||||||||    
T  16097011 aacctcaaaccacc 16096998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 347 - 460
Target Start/End: Complemental strand, 38400899 - 38400786
Alignment:
Q  347 aagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaa 446  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||  ||||||||| | ||||   |||||||||||||||||||||||||||||||||    
T  38400899 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaa 38400800  T
Q  447 cctcaaaccaccct 460  Q
    ||||||||||||||    
T  38400799 cctcaaaccaccct 38400786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 261 - 448
Target Start/End: Complemental strand, 3953189 - 3953006
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||| |||||||||||||| |||||||||||| || ||||||||||||| |||||||||||||||||  |||           ||||| | |||||||    
T  3953189 gcagggtcgtccctgagaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaatgtatttttttt----aaagaccgatgttct 3953094  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||||  |||| ||| |||||||| | |||||||||| | |||||||| |||||||||||    
T  3953093 atttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacc 3953006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 24035544 - 24035659
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||  |||| ||| | ||||||||||||||||||||||||||| ||||||||||    
T  24035544 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgagg 24035643  T
Q  445 aacctcaaaccaccct 460  Q
    || | |||||||||||    
T  24035644 aatcgcaaaccaccct 24035659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 7162967 - 7162784
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||| |||| |||||| |||| |  ||||||||||||||||||||||||| ||||  | |          |||||||| ||||||||    
T  7162967 cagggccgtccctgagatttcgaaggctcagctcggggaatgaaaagaggccagtgataaaattaaaatgtct---tttttttaaaagagcgatgttcta 7162871  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||| ||  | |||||||||| ||||||||||| ||||||||||    
T  7162870 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacc 7162784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 21665699 - 21665814
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||   |||||||||| |||| | ||| |||||||||||||||||||||||||||    
T  21665699 aaaagaacaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgagg 21665798  T
Q  445 aacctcaaaccaccct 460  Q
    |||| |||||||||||    
T  21665799 aaccacaaaccaccct 21665814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 12134039 - 12134154
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |   ||||||||||||||||||||| |  |||||||| | |||||| ||| ||||||||||||||||||||||| |||    
T  12134039 aaaagaacaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattagg 12134138  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||||||||||||    
T  12134139 aacctcaaaccaccct 12134154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 262 - 460
Target Start/End: Original strand, 16227285 - 16227482
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||| |||  |||||||||||||| | |||| || ||||||||| ||  | ||||||| ||||||||||          ||||| |||| |||||    
T  16227285 cagggccgttcctacgaattcggaggctcagttctgtaagtgaaaagagacct-taataaaataaaaacatatattttttttttaaagaacaattttcta 16227383  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 460  Q
    |||| ||||||||||||||||||||||||||   |||||||||| |||||| | || |||||||||||||  ||||||| |||||||||||||||||||    
T  16227384 tttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataaggaacctcaaaccaccct 16227482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 262 - 377
Target Start/End: Original strand, 1396617 - 1396730
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||| ||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||  |||         |||||||||||||||||    
T  1396617 cagggccttccttgagaattcggaggctcgactctggaaatgaaaagaggccagtgataaaatcaaaac--ataattttttttaaaagagcaatgttcta 1396714  T
Q  362 tttatattttttaaaa 377  Q
    ||||||||||||||||    
T  1396715 tttatattttttaaaa 1396730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 268 - 422
Target Start/End: Original strand, 5952642 - 5952791
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttata 367  Q
    |||||||||||||||||||| ||||||||   ||||||||||||||| ||||||||||||||| |||          |||||||||||||| ||||  ||    
T  5952642 cgtccctgagaattcggaggttcggctctcggaatgaaaagaggccaatgataaaatcaaaacgtat---tttttttaaaagagcaatgttatatt--ta 5952736  T
Q  368 ttttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaa 422  Q
    ||||||||||||||||||||||||||  |||||||| |||||||| | |||||||    
T  5952737 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 5952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 457
Target Start/End: Original strand, 7742063 - 7742245
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnn-aaaagagcaatgttctatttatatttt-tta 374  Q
    |||| |||||| |||| |||| || |||||||||||| |||||||||| |||||| |||          |||||| |||||||||||||||||||| |||    
T  7742063 gaatccggaggttcggttctgtaagtgaaaagaggcccgtgataaaataaaaacacatattatttttttaaaagaacaatgttctatttatattttttta 7742162  T
Q  375 aaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccac 457  Q
    |||||||||||||| |||  ||||||||| | |||| | |||||||||||  |||| ||||| ||||||||||||||||||||    
T  7742163 aaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgaggaacctcaaaccac 7742245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 345 - 458
Target Start/End: Original strand, 13800543 - 13800657
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtaca-cctaaaggtgaaaatcactaccgtatacatgag 443  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||||  |||||||| | |||| || ||||||||||||||||||  |||||| |||    
T  13800543 aaaagaacaatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgag 13800642  T
Q  444 gaacctcaaaccacc 458  Q
    |||||||||| ||||    
T  13800643 gaacctcaaatcacc 13800657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 345 - 452
Target Start/End: Original strand, 28425709 - 28425816
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |  |||||||||||||||||||||||   ||||||||  ||||||| ||| ||||||||||||||| |||| ||||||    
T  28425709 aaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgagg 28425808  T
Q  445 aacctcaa 452  Q
    ||||||||    
T  28425809 aacctcaa 28425816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 346 - 427
Target Start/End: Complemental strand, 42029247 - 42029166
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatca 427  Q
    ||||| |||||||||||||| ||||||||||||||||||| ||||||  ||||| |||| ||||||||||||||||||||||    
T  42029247 aaagaacaatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaatca 42029166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 346 - 460
Target Start/End: Original strand, 11912757 - 11912871
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| ||||   |||| |||||||||| ||||  ||||||||   |||| | |||| |||||||||||||||||||||| ||||    
T  11912757 aaagaacaatgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataagga 11912856  T
Q  446 acctcaaaccaccct 460  Q
    |||||||||||||||    
T  11912857 acctcaaaccaccct 11912871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 262 - 392
Target Start/End: Complemental strand, 8327801 - 8327674
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||| |||||||| | ||||||||||||| | |||| ||||||||||||  |||||||||||||||||| |||          |||| ||||||| ||||    
T  8327801 caggaccgtccctaaaaattcggaggctcagttctggaaatgaaaagagatcagtgataaaatcaaaacgtat---tttttttaaaaaagcaatgatcta 8327705  T
Q  362 tttatattttttaaaagataaatacaaggtg 392  Q
    |||||||||||||||||||||||| ||||||    
T  8327704 tttatattttttaaaagataaatataaggtg 8327674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 379 - 460
Target Start/End: Complemental strand, 37182739 - 37182658
Alignment:
Q  379 ataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 460  Q
    ||||||||||||||   ||||||||   |||||| ||| |||||||||||||||||||||||||||||||||||| ||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacctcaaatcaccct 37182658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 11952656 - 11952720
Alignment:
Q  396 tatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 460  Q
    |||||||||| |||||  | || ||||||||||||| | ||||||||||||||||||||||||||    
T  11952656 tatatatgtgatacactcatagatgaaaatcactactgcatacatgaggaacctcaaaccaccct 11952720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 374 - 458
Target Start/End: Original strand, 22727530 - 22727614
Alignment:
Q  374 aaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccacc 458  Q
    ||||||||||||| | |||   |||||||| |||||||| ||| ||||||||||||||| |||||||||  | ||||||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatgataaccctcaaaccacc 22727614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 386
Target Start/End: Original strand, 22727391 - 22727497
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaa 376  Q
    ||||||||||||||| | ||| || ||||||||||| ||| ||||||| ||||| |||          |||||| |||||||||||||| ||||||||||    
T  22727391 gaattcggaggctcgacgctgtaagtgaaaagaggcaagtaataaaataaaaacgtat---tttttttaaaagaacaatgttctatttaaattttttaaa 22727487  T
Q  377 agataaatac 386  Q
    ||||||||||    
T  22727488 agataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 460
Target Start/End: Original strand, 37622418 - 37622454
Alignment:
Q  424 atcactaccgtatacatgaggaacctcaaaccaccct 460  Q
    |||||||||||||||| ||||||||||||||||||||    
T  37622418 atcactaccgtatacacgaggaacctcaaaccaccct 37622454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Complemental strand, 10252511 - 10252472
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtg 392  Q
    ||||||| ||||| ||||||||||||||||||||||||||    
T  10252511 aatgttcaatttaaattttttaaaagataaatacaaggtg 10252472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 11952588 - 11952624
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataa 382  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  11952588 aaagaacaatgttctatttaaattttttaaaagataa 11952624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 2952136 - 2952323
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           ||||||||||||||||    
T  2952136 gcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaaagagcaatgttct 2952235  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||| ||||  |||||||| |||||||| | || ||||||| ||||||||||||||||||||||    
T  2952236 atttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 2952323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 265 - 448
Target Start/End: Complemental strand, 30883512 - 30883330
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |         ||||||||||||||||||||    
T  30883512 ggccgtccctgagaattcagaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata-atttttttttaaaagagcaatgttctattt 30883414  T
Q  365 atattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  30883413 atattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 30883330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 261 - 448
Target Start/End: Complemental strand, 42600968 - 42600783
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |          |||| ||||||| |||    
T  42600968 gcagggccgtccctaagaattcggaggctcggctctgaaaatgaaaagaggtcagtgataaaatcaaaacgttt--ttttttttaaaaaagcaatgatct 42600871  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||| |||||||  ||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  42600870 atttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 42600783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 261 - 448
Target Start/End: Complemental strand, 45476002 - 45475818
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||| |||          ||||||||||||||||    
T  45476002 gcagggccatccctgagaattcggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttct 45475906  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  45475905 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacc 45475818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 3048434 - 3048619
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           ||||||||||| | ||    
T  3048434 gcagggccgtctctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata--attttttttaaaagagcaatatact 3048531  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||||||||| || ||||||| ||||||||||||| ||||||||    
T  3048532 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaacc 3048619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 37430075 - 37430260
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |          |||||||| |||||||    
T  37430075 gcagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgttt--ttttttttaaaagagcgatgttct 37430172  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||||  |||||||| | |||||||| |||| ||||| ||||||||||||||||||||||    
T  37430173 atttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaacc 37430260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 23606548 - 23606731
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||| |||          |||||||||||||||||    
T  23606548 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 23606644  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||| |||||| ||||| ||||||||||||||||||||||    
T  23606645 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacc 23606731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 265 - 448
Target Start/End: Original strand, 13534609 - 13534788
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          ||||||||||||||||||||    
T  13534609 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttctattt 13534705  T
Q  365 atattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  13534706 atattttttaaaagataaatacaa-gtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13534788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 265 - 448
Target Start/End: Original strand, 13624149 - 13624328
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          ||||||||||||||||||||    
T  13624149 ggccgtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttctattt 13624245  T
Q  365 atattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  13624246 atattttttaaaagataaatacaa-gtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 13624328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 23798179 - 23798363
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  || ||||||||| || ||||||||||||||| ||||          ||||||||||||||||    
T  23798179 cagggccgtccctaagaattcggaggctcggctctgggaacgaaaagaggtcaatgataaaatcaaaacgtatatttttttt--aaagagcaatgttcta 23798276  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||| ||| |||||||| ||||||||||||||||||||||    
T  23798277 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 23798363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 10917575 - 10917392
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||          |||| | ||||| ||||    
T  10917575 cagggctgtccttaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtat---ttttttaaaaaaaacaatgatcta 10917479  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||| |||||||||||| |||||| |||||||||||||||    
T  10917478 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgaggaacc 10917392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 273 - 448
Target Start/End: Original strand, 5860671 - 5860846
Alignment:
Q  273 ctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttt 372  Q
    ||||||||| ||||||||||||||| ||||||||||||| || ||||||||||||||||||            |||||||||||||||||||||||||||    
T  5860671 ctgagaatttggaggctcggctctggaaatgaaaagaggtcaatgataaaatcaaaacataatatttatttttaaagagcaatgttctatttatattttt 5860770  T
Q  373 taaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||  |||||||| |||||||| | |||||||||| |||||| |||||||||| ||||    
T  5860771 taaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaacc 5860846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 261 - 448
Target Start/End: Complemental strand, 41879365 - 41879182
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||||  ||||||||||| ||||| |||          |||||| |||||||||    
T  41879365 gcagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggttagtgataaaattaaaacgtat----ttttttaaaagaacaatgttct 41879270  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||| |  |||||||| |||||| | |||||||||||| ||||||| ||||||||| ||||    
T  41879269 atttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacc 41879182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 353 - 455
Target Start/End: Complemental strand, 8103008 - 8102906
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8103008 aatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacctcaa 8102909  T
Q  453 acc 455  Q
    |||    
T  8102908 acc 8102906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 345 - 458
Target Start/End: Original strand, 7944521 - 7944634
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| ||||||| |||||| ||||||||||| |||||||||||||||  ||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  7944521 aaaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagg 7944620  T
Q  445 aacctcaaaccacc 458  Q
    ||||||||||||||    
T  7944621 aacctcaaaccacc 7944634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 346 - 460
Target Start/End: Original strand, 39332405 - 39332519
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| ||||||||||||||  ||||| |||||||||||||||||||  ||||||| | |||||| | ||||||||||||||||||||||||||||||||    
T  39332405 aaagaacaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgagga 39332504  T
Q  446 acctcaaaccaccct 460  Q
    |||||||||||||||    
T  39332505 acctcaaaccaccct 39332519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 345 - 458
Target Start/End: Complemental strand, 11290288 - 11290175
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| ||||||| |||||| ||||||||||||||||||||||||||   ||||||||| ||||||  ||||||||||||||||||||||||||||||     
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagc 11290189  T
Q  445 aacctcaaaccacc 458  Q
    ||||||||||||||    
T  11290188 aacctcaaaccacc 11290175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 345 - 458
Target Start/End: Original strand, 5973106 - 5973219
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||   ||||||||| ||||||| | || ||||||||| ||||||||||| ||||    
T  5973106 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgagg 5973205  T
Q  445 aacctcaaaccacc 458  Q
    ||||||||||||||    
T  5973206 aacctcaaaccacc 5973219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 41677172 - 41677288
Alignment:
Q  345 aaaagagcaatgttctatttatatttt-ttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgag 443  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||| ||   |||||||| | |||| |||||||||||||||||||| |||||||||||    
T  41677172 aaaagaacaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgag 41677271  T
Q  444 gaacctcaaaccaccct 460  Q
    |||||||||||||||||    
T  41677272 gaacctcaaaccaccct 41677288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 15167414 - 15167529
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||||||||||||||| || |||   |||||||| | |||||| ||| ||||||||||||| |||||||||||||    
T  15167414 aaaagaacaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 15167513  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||||||||||||    
T  15167514 aacctcaaaccaccct 15167529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 354 - 460
Target Start/End: Complemental strand, 5721654 - 5721548
Alignment:
Q  354 atgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaa 453  Q
    ||||||||||||  ||||||||||||||||||||||||||  ||||||   |||||||| ||| ||||||||||||||||||||| ||||||||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacctcaaa 5721555  T
Q  454 ccaccct 460  Q
    |||||||    
T  5721554 ccaccct 5721548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 368 - 460
Target Start/End: Complemental strand, 5942777 - 5942685
Alignment:
Q  368 ttttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 460  Q
    |||||||||||||||||||||| ||   ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 5942685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 353 - 457
Target Start/End: Complemental strand, 15078854 - 15078750
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    ||||||||||||| | ||||||||||||||||| |||||||  ||||||||   |||||| ||| ||||||||||||| |||||||||||||||||||||    
T  15078854 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 15078755  T
Q  453 accac 457  Q
    |||||    
T  15078754 accac 15078750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 458
Target Start/End: Original strand, 34789861 - 34789974
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| | |||||||||||| || | |||||||||||||||||| ||   ||||||||| ||||||| ||||||||||||||||||||||||||||||     
T  34789861 aaaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaga 34789960  T
Q  445 aacctcaaaccacc 458  Q
    ||  ||||||||||    
T  34789961 aatatcaaaccacc 34789974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 460
Target Start/End: Original strand, 25561502 - 25561607
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    ||||||||||||| || ||||||| ||||||||||||||||  |||||||| | || ||| ||| |||||||||||| ||||||||||||||||||||||    
T  25561502 aatgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacctcaa 25561599  T
Q  453 accaccct 460  Q
    ||||||||    
T  25561600 accaccct 25561607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 20003728 - 20003796
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 330  Q
    |||||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||||||||||||    
T  20003728 cagggccgtccctgagaatttggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaac 20003796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 23941097 - 23941205
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    ||||||| |||||| ||||||||||||||||||||||||||  ||||||| | | |||||| |||| |||||||||| | | |||| | |||||||||||    
T  23941097 caatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaatcacaatcatatatacgaggaacctca 23941196  T
Q  452 aaccaccct 460  Q
    |||||||||    
T  23941197 aaccaccct 23941205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 454
Target Start/End: Complemental strand, 8646309 - 8646201
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||    ||||||||   |||||  ||| ||||||||||||||||||||||| ||     
T  8646309 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatg-catacacgcaaatgtgaaaatcactaccgtatacataaga 8646211  T
Q  445 aacctcaaac 454  Q
    ||||||||||    
T  8646210 aacctcaaac 8646201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 346 - 460
Target Start/End: Original strand, 34048705 - 34048821
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgca--atatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgag 443  Q
    ||||| |||||||||||||| |  ||||||||||||||||||| |||    |||||||| || |||||| |||| ||||||||||||| |||||||||||    
T  34048705 aaagaacaatgttctatttaaacattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgag 34048804  T
Q  444 gaacctcaaaccaccct 460  Q
    || ||||| ||||||||    
T  34048805 gatcctcataccaccct 34048821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 458
Target Start/End: Original strand, 14509983 - 14510094
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaa-tcactaccgtatacatgagg 444  Q
    ||||| |||||||| ||||| ||||||||||||| ||||| ||||||   |||||| |  ||||||| ||| ||||||| |||||||||||||||||||     
T  14509983 aaagaacaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatatacg--gtacacccaaatgtgaaaaatcactaccgtatacatgagt 14510080  T
Q  445 aacctcaaaccacc 458  Q
    ||||||||||||||    
T  14510081 aacctcaaaccacc 14510094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 428
Target Start/End: Original strand, 30674403 - 30674485
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcac 428  Q
    ||||| |||||||||||||| || |||||||||||||||| ||||||   |||||||| | |||||  |||||||||||||||    
T  30674403 aaagaacaatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaatcac 30674485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 9108596 - 9108551
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggt 391  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||    
T  9108596 aaagaacaatgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 353 - 392
Target Start/End: Original strand, 34868184 - 34868223
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtg 392  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  34868184 aatgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 307
Target Start/End: Original strand, 33963267 - 33963313
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaa 307  Q
    |||||||||| | ||||||||||||||||||||| ||| ||||||||    
T  33963267 gcagggccgttcatgagaattcggaggctcggctttgagaatgaaaa 33963313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 38009151 - 38009191
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaata 385  Q
    |||||| |||||||||||||| | |||||||||||||||||    
T  38009151 aaaagaacaatgttctatttaaaatttttaaaagataaata 38009191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 2e-59; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 257 - 448
Target Start/End: Complemental strand, 54780973 - 54780783
Alignment:
Q  257 atacgcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatg 356  Q
    |||| |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||| |||          ||||||||||||    
T  54780973 atacacagggccgtccctgagaattcggaggcttggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat-tttttttttaaaagagcaatg 54780875  T
Q  357 ttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  54780874 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 54780783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 266 - 448
Target Start/End: Complemental strand, 47129172 - 47128993
Alignment:
Q  266 gccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattta 365  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||          |||||| ||||||||||||||    
T  47129172 gccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatgtat---tttttttaaaagaacaatgttctattta 47129076  T
Q  366 tattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||| | |||| ||||| ||||||||||||||||||||||    
T  47129075 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 47128993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 274 - 448
Target Start/End: Original strand, 38209520 - 38209692
Alignment:
Q  274 tgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatatttttt 373  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||  ||||          ||||||||||||||||||||||||||||    
T  38209520 tgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaa--tataatttttttttaaagagcaatgttctatttatatttttt 38209617  T
Q  374 aaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  38209618 aaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 38209692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 32915575 - 32915391
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||   |          |||||||| ||||||||    
T  32915575 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacggtt--ttttttttaaaagagcgatgttcta 32915478  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||| | |||| ||||| | ||||||||||||||||||||    
T  32915477 tttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacc 32915391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 34027768 - 34027585
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          |||| ||||||||||||    
T  34027768 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat---ttttttaaaaaaagcaatgttcta 34027672  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||||   |||||||| |||||||| |||||||||||| ||||| ||||||||||||||||    
T  34027671 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacc 34027585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 34768492 - 34768675
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||| ||||||||||||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||||          |||||||||||||||||    
T  34768492 cagggtcgtccctgagaattcggaggctcggctttgggaatgaaaagaggctagtgataaaatcaaaacatat---tttttttaaaagagcaatgttcta 34768588  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||| | |||||||||| | ||||||||||||||||||||    
T  34768589 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacc 34768675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 2790659 - 2790842
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||| || ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||| |          |||||| ||||||||||    
T  2790659 cagggccgtctctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacattt---tttttttaaaagaacaatgttcta 2790755  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||| |  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  2790756 tttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 2790842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 276 - 448
Target Start/End: Original strand, 43455463 - 43455632
Alignment:
Q  276 agaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaa 375  Q
    |||||||||||||||| |||||  |||||||||||| |||||||||||||||||| |||          |||||||||||||||||||||||||||||||    
T  43455463 agaattcggaggctcgactctgggaatgaaaagaggtcagtgataaaatcaaaacgtat---tatttttaaaagagcaatgttctatttatattttttaa 43455559  T
Q  376 aagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||| |||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  43455560 aagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 43455632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 37777140 - 37777324
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||| |||||| | ||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||          |||| || |||||||||    
T  37777140 cagggctgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtat--tttttaaaaaaaaagtaatgttcta 37777237  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  37777238 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 37777324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 261 - 393
Target Start/End: Complemental strand, 55255448 - 55255318
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||         |||||||||||||||     
T  55255448 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac--ataattttttttaaaagagcaatgttcc 55255351  T
Q  361 atttatattttttaaaagataaatacaaggtgc 393  Q
    |||||||||||||||||||||||||||||||||    
T  55255350 atttatattttttaaaagataaatacaaggtgc 55255318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 256 - 448
Target Start/End: Complemental strand, 10979098 - 10978906
Alignment:
Q  256 tatacgcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaat 355  Q
    |||| ||||||||||| ||||||||||||||| |  ||||||  ||||||||||||  ||||||||||||||||| |||          |||||||||||    
T  10979098 tataggcagggccgtctctgagaattcggaggtttagctctgggaatgaaaagaggttagtgataaaatcaaaacgtatttttttttttaaaagagcaat 10978999  T
Q  356 gttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||||||||   |||||||| |||||||| | | |||||||| ||||||||||||||||||||||    
T  10978998 gttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacc 10978906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 16845210 - 16845027
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||||||||||| |||          |||||||||||||||||    
T  16845210 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaaaag-ccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 16845115  T
Q  362 tttatatttttt-aaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||| |||||||||||| ||||||   ||||||||| ||||||| || ||||||||| ||||||||||||||||||||||    
T  16845114 tttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacc 16845027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 261 - 440
Target Start/End: Complemental strand, 32128775 - 32128598
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||| |||||| |||||||||||||||  |||||||| ||| |||||||||||||||||| |||          ||||||||||||||||    
T  32128775 gcagggccgtccctaagaatttggaggctcggctctgggaatgaaaaaaggtcagtgataaaatcaaaacgtat--ttttttttaaaagagcaatgttct 32128678  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacat 440  Q
    ||||||||||||||||||||||||| ||||||   |||||||| |||||||| |||||||||||| ||||||||||||||    
T  32128677 atttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacat 32128598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 54083159 - 54083343
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||| | ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||          |||| | ||||| |||    
T  54083159 gcagggccgtccctaaaaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgtat---ttttttaaaaaaaacaatgatct 54083255  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||| |||||||  |||||||| |||||||| |||| | ||||| ||||||||||||||||||||||    
T  54083256 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgaggaacc 54083343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 261 - 448
Target Start/End: Complemental strand, 48209437 - 48209246
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaa-----atcaaaacatatannnnnnnnnaaaagagcaat 355  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||||| |||||||||||     |||||||| |||          |||||||||||    
T  48209437 gcagggccgtccctgagaattcggaggctcggctctgggagtgaaaagagaccagtgataaattaaaatcaaaacgtat-tttttttttaaaagagcaat 48209339  T
Q  356 gttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| | | ||||| || ||||||||||||||||| ||||    
T  48209338 gttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacc 48209246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 266 - 448
Target Start/End: Complemental strand, 1105717 - 1105538
Alignment:
Q  266 gccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattta 365  Q
    ||||||| ||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||| |||          |||||||  ||||||||||||    
T  1105717 gccgtccttgagaattcagaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagtgatgttctattta 1105621  T
Q  366 tattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||    |||||||| |||||||||| |||||||||| |||||| |||||||||| ||||    
T  1105620 tattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacc 1105538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 261 - 450
Target Start/End: Original strand, 5128757 - 5128945
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatc-aaaacatatannnnnnnnnaaaagagcaatgttc 359  Q
    |||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||||||||| ||||| | |          | |||||| || |||    
T  5128757 gcagggccgtccctgagaatttagaggctcggctctgggaatgaaaagaggccagtgataaaatctaaaacgttt--ttttttttagaagagcgatattc 5128854  T
Q  360 tatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctc 450  Q
    ||||||||||||||||||||||||||||||||||  ||||||||  || |||| | |||||||||| ||||||||||||||||||||||||    
T  5128855 tatttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctc 5128945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 261 - 422
Target Start/End: Complemental strand, 17679590 - 17679432
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||| |||||||||||||||||||| ||||  ||||||||||| ||||||||||||||||||| |||          ||||||||||| ||||    
T  17679590 gcagggccgtctctgagaattcggaggctcggttctgggaatgaaaagagaccagtgataaaatcaaaacgtat---tttttttaaaagagcaatattct 17679494  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaa 422  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||    
T  17679493 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 273 - 446
Target Start/End: Complemental strand, 35465284 - 35465115
Alignment:
Q  273 ctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttt 372  Q
    |||||||||||||||||||  ||||  |||||||||||| ||||||||||||||||||||||          |||||| ||||||| |||||||||||||    
T  35465284 ctgagaattcggaggctcgattctgggaatgaaaagaggtcagtgataaaatcaaaacatat---tttttttaaaagaacaatgttatatttatattttt 35465188  T
Q  373 taaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaa 446  Q
    || |||||||||| |||||||  |||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  35465187 tacaagataaataaaaggtgcg-tatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaa 35465115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 277 - 458
Target Start/End: Complemental strand, 52468459 - 52468282
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaa 376  Q
    ||||||||||||||||||||| |  |||||||||| | || ||||||| ||||| |||          |||||| |||||||||||||| ||||||||||    
T  52468459 gaattcggaggctcggctctgtaggtgaaaagaggtctgtaataaaataaaaacgtat----ttttttaaaagaacaatgttctatttaaattttttaaa 52468364  T
Q  377 agataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccacc 458  Q
    |||||||||||||||||  |||||||||  |||| | ||||||||||||||||||||||| |||||||||||||||||||||    
T  52468363 agataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaacctcaaaccacc 52468282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 19498691 - 19498510
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||| || |||||||||||||||||||||   |||||||| |||||| ||||||||||||||| |||          |||||||||||||||||    
T  19498691 cagggccgtcactaagaattcggaggctcggctctaggaatgaaaacaggccaatgataaaatcaaaacgtat---tttgtttaaaagagcaatgttcta 19498595  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||    |||||| |||||| | |||||||||||| ||||| ||||||||||||||||    
T  19498594 tttatattttttaaaagataaatataaggtgc--cgtatatgcggtacagccaaaggtgaaaatgactactgtatacatgaggaacc 19498510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 27112132 - 27112024
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    |||||||| ||||| ||||||||||||||||||||||||||  ||||||||| | |||||| ||| ||||||||||||||||||||||||||||||||||    
T  27112132 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacctca 27112033  T
Q  452 aaccaccct 460  Q
    |||||||||    
T  27112032 aaccaccct 27112024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 262 - 442
Target Start/End: Complemental strand, 37514848 - 37514671
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||| |||||||| ||   |||  ||||||||||||||||||||||||||||| |||          ||| |||| ||||||||    
T  37514848 cagggccgtccctgagaatttggaggctcagcggggaa--tgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaa-gagcgatgttcta 37514752  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatga 442  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||  | |||||||||| ||||||||||||||||    
T  37514751 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatga 37514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 253 - 450
Target Start/End: Original strand, 10428107 - 10428308
Alignment:
Q  253 acatatacgcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagc 352  Q
    |||||||| |||||||||||  |||||||||||||||||||||||  |||||||||||| ||||| |||||||||||  |||           ||| |||    
T  10428107 acatatacacagggccgtcctcgagaattcggaggctcggctctgggaatgaaaagaggtcagtgctaaaatcaaaatttatttttttt----aaaaagc 10428202  T
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaag--------gtgaaaatcactaccgtatacatgagg 444  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| | ||        |||||||| ||||||||||||||||||    
T  10428203 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgagg 10428302  T
Q  445 aacctc 450  Q
    ||||||    
T  10428303 aacctc 10428308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 265 - 449
Target Start/End: Original strand, 35779248 - 35779427
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||| |||||||||||||| ||| |||    ||||||||||||| ||||||||||||||||| |||           ||||||||||||||||||     
T  35779248 ggccgtccttgagaattcggaggttcgactcgaggaatgaaaagaggctagtgataaaatcaaaacgtatttttttt----aaagagcaatgttctatt- 35779342  T
Q  365 atattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacct 449  Q
    ||||||||||||||||||||||||||||   |||||||| |||||||| |||||||||||| | |||||||||||||||||||||    
T  35779343 atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacct 35779427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 10041998 - 10042113
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||| |||| |||||||||||||||  ||| |||||| |||||||||| |||||||||||||||||||||| ||||    
T  10041998 aaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggagg 10042097  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||||| ||||||    
T  10042098 aacctcaaatcaccct 10042113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 345 - 460
Target Start/End: Complemental strand, 24397043 - 24396928
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||| || |||||| ||||||||||||||||||| |||||||| |||||||||| |||||  ||||||||||||||||| |||||||||||||    
T  24397043 aaaagaacaatattttatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgagg 24396944  T
Q  445 aacctcaaaccaccct 460  Q
    |||||||||| |||||    
T  24396943 aacctcaaactaccct 24396928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 51691913 - 51692030
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacc--taaaggtgaaaatcactaccgtatacatga 442  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| ||||||||   ||| ||||||||||||||| |||||| ||    
T  51691913 aaaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatatacacga 51692012  T
Q  443 ggaacctcaaaccaccct 460  Q
     |||||||||||||||||    
T  51692013 tgaacctcaaaccaccct 51692030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 261 - 436
Target Start/End: Original strand, 16882312 - 16882484
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||| |||||||||||||||||||||   |||||||||| | |||||||||||||||||| |||          |||| | |||||||||    
T  16882312 gcagggccgtccctaagaattcggaggctcggctctaggaatgaaaagaagtcagtgataaaatcaaaacgtat---ttttttaaaaaaaacaatgttct 16882408  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtat 436  Q
    ||||||| ||||||||||||||||| |||||||  | |||||  |||||||| |||||||||||| ||||||||||    
T  16882409 atttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtat 16882484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 352 - 460
Target Start/End: Original strand, 36118463 - 36118571
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    |||||||||||||| ||||||||||||||||||||||||||   |||||||||| |||||| |||  ||||||||||||||||||||||||| ||||||     
T  36118463 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacctct 36118562  T
Q  452 aaccaccct 460  Q
    |||||||||    
T  36118563 aaccaccct 36118571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 366 - 458
Target Start/End: Original strand, 4167910 - 4168002
Alignment:
Q  366 tattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccacc 458  Q
    ||||||||||||||||||||||||||||  |||||||| | |||||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  4167910 tattttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacctcaaatcacc 4168002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 460
Target Start/End: Original strand, 39329325 - 39329505
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaa 376  Q
    ||||| |||||||||| |||| || |||||||||| | || ||||||| |||||||||          |||||| ||||||||| |||| ||||||||||    
T  39329325 gaatttggaggctcggttctgtaagtgaaaagaggtccgtaataaaataaaaacatat---tttttttaaaagaacaatgttctctttaaattttttaaa 39329421  T
Q  377 agataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 460  Q
    ||||||||||||||||   |||||||||| |||||| |||| ||||||||  ||||||||||| ||||||| ||||||||||||    
T  39329422 agataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggaggaacatcaaaccaccct 39329505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 40089714 - 40089522
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||| ||||||| |||||||||||||||||||||   |||||||||| | |||||||||||||||||| |||          |||| ||||||||| ||    
T  40089714 cagggtcgtccctaagaattcggaggctcggctcttggaatgaaaagaagtcagtgataaaatcaaaacgtat---tttttttaaaaaagcaatgtttta 40089618  T
Q  362 tttatattt---------tttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||         ||||||||||||||| |||||||  |||||||| |||||| | |||||||||||| ||||||||||||||||||||||    
T  40089617 tttatatttatttatatttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 40089522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 385
Target Start/End: Original strand, 16922245 - 16922367
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||| ||||||||| || ||  ||||||||||| ||||||||||||||||||| | |          |||||||||||||||||    
T  16922245 cagggccgtccctgagaatttggaggctcgactttgggaatgaaaagagaccagtgataaaatcaaaacgt-tttttatttttaaaagagcaatgttcta 16922343  T
Q  362 tttatattttttaaaagataaata 385  Q
    ||||||||||||||||||||||||    
T  16922344 tttatattttttaaaagataaata 16922367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 262 - 410
Target Start/End: Original strand, 9578575 - 9578728
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaa-----atcaaaacatatannnnnnnnnaaaagagcaatg 356  Q
    ||||||||||| |||||||||||||||||| |||||  | ||||||||||| |||||||||     |||||||| |||          ||||||||||||    
T  9578575 cagggccgtccttgagaattcggaggctcgactctgggagtgaaaagaggcaagtgataaattaaaatcaaaacgtat-ttcttttttaaaagagcaatg 9578673  T
Q  357 ttctatttatattttttaaaagataaatacaaggt-gcaatatatatgtggtaca 410  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||    
T  9578674 ttctatttatattttttaaaagataaatacaaggtagccatatatatgcggtaca 9578728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 425
Target Start/End: Complemental strand, 51964897 - 51964737
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||| ||| ||| ||||||||| ||||||||||  ||||||||||||||  ||||||||||||||| |||          ||||||||||||||||||||    
T  51964897 ggccatccttgaaaattcggagactcggctctgggaatgaaaagaggccgatgataaaatcaaaacgtat---tttttttaaaagagcaatgttctattt 51964801  T
Q  365 atatttttt---aaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaat 425  Q
    |||||||||   ||||||||||||||||||||  |||||||| | |||||| | ||||||||||    
T  51964800 atattttttttaaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaat 51964737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 355 - 448
Target Start/End: Complemental strand, 13460306 - 13460213
Alignment:
Q  355 tgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||| |||| ||| | | |||||||| |||||||||||||| |||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacc 13460213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 354 - 458
Target Start/End: Original strand, 37744916 - 37745021
Alignment:
Q  354 atgttctatttatatttttt-aaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    |||||||||||| ||||||| |||||||||||| ||||||    ||||||| | |||| | ||||||||||||||||||||||||| |||||||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacctcaa 37745015  T
Q  453 accacc 458  Q
    ||||||    
T  37745016 accacc 37745021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 36178774 - 36178667
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    |||||||||||||| ||| ||||||||||||||||||||||   |||||||| | |||||| ||| ||||||||||||||| ||||||||| ||| | ||    
T  36178774 caatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatgaagaatc-ca 36178676  T
Q  452 aaccaccct 460  Q
    |||||||||    
T  36178675 aaccaccct 36178667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 45656277 - 45656169
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    ||||||| |||||| |||||||||||||||||| |||||||  ||||||||| | || | | ||| ||||||||||| | ||||||||||| ||||||||    
T  45656277 caatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaacctca 45656178  T
Q  452 aaccaccct 460  Q
    |||||||||    
T  45656177 aaccaccct 45656169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 36362869 - 36362983
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| ||||| ||| |||| |||||||||||||||||||||| ||||  ||||||||   |||||| ||| ||| ||||||||||| ||||||| |||    
T  36362869 aaaagaacaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat-agg 36362967  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||||||||||||    
T  36362968 aacctcaaaccaccct 36362983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 454
Target Start/End: Original strand, 2135326 - 2135428
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    |||| ||||||||| ||||||||||||||||||||||||||   |||||||| | |||| | |||||| || ||||||| |||||| |||||||||||||    
T  2135326 caatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaacctca 2135425  T
Q  452 aac 454  Q
    |||    
T  2135426 aac 2135428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 268 - 448
Target Start/End: Original strand, 38352189 - 38352356
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttata 367  Q
    ||||||| ||||||||||||||||||||||  |||||||||||  |||||||||||||||||| |||           ||| || |||| ||||||||||    
T  38352189 cgtccctaagaattcggaggctcggctctgggaatgaaaagagatcagtgataaaatcaaaacgtat---ttttttttaaaaagtaatgatctatttata 38352285  T
Q  368 ttttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||| ||||||          | |||||||| |||||||||||| |||||||| |||||||||||||    
T  38352286 ttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtgtacatgaggaacc 38352356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 392
Target Start/End: Original strand, 23508427 - 23508556
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||| |||||| ||| ||||||||||||||||| ||  |||||||||||||||||||||||||||||  || ||          || |||||||||||||    
T  23508427 caggaccgtccatgaaaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaa--atgtattttttttttaatgagcaatgttcta 23508524  T
Q  362 tttat-attttttaaaagataaatacaaggtg 392  Q
    ||||| ||||||||||||||||||||||||||    
T  23508525 tttataattttttaaaagataaatacaaggtg 23508556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 427
Target Start/End: Original strand, 39655252 - 39655334
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatca 427  Q
    |||||| |||||||||||||| |||||||||||||||||||||| || |   ||||||| |||||||| ||||||||||||||    
T  39655252 aaaagaacaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaatca 39655334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 359 - 460
Target Start/End: Complemental strand, 40217327 - 40217226
Alignment:
Q  359 ctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccacc 458  Q
    ||||||| ||||||||||||||||||| ||||||   |||||||| | |||| | |||| ||||||||| || | |||||||||| ||||||||||||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacctcaaaccacc 40217228  T
Q  459 ct 460  Q
    ||    
T  40217227 ct 40217226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 24969536 - 24969443
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||||          | |||||||| |||||||||||| ||||||||||||||||||    
T  24969536 aaaaaagcaatgatctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgagg 24969447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 24969786 - 24969718
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 330  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||||||| |||||||||| ||||||    
T  24969786 cagggccgtccctaagaattcggaggctcgactctgggaatgaaaagaggctagtgataaaaacaaaac 24969718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 460
Target Start/End: Complemental strand, 15735189 - 15735089
Alignment:
Q  355 tgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaac 454  Q
    ||||||||||| |||||||||||||||||||||||  |   |||||||     ||||| |||  ||||||||| ||||||||||||||||||| ||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaagacgtcgtatatat-----acaccaaaaaatgaaaatcattaccgtatacatgaggaacttcaaac 15735095  T
Q  455 caccct 460  Q
    ||||||    
T  15735094 caccct 15735089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 334
Target Start/End: Original strand, 2975358 - 2975414
Alignment:
Q  278 aattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatat 334  Q
    |||||| | ||||||||||||||||||||||||| || |||||||||||||||||||    
T  2975358 aattcgaatgctcggctctgaaaatgaaaagaggtcaatgataaaatcaaaacatat 2975414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 360 - 460
Target Start/End: Original strand, 29425187 - 29425287
Alignment:
Q  360 tatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccc 459  Q
    |||||| ||||||||||| ||||||| |||||||  ||||||||  |||||  |||||||||||||  ||||| || ||| ||| |||||||||||||||    
T  29425187 tatttaaattttttaaaaaataaatataaggtgccgtatatatgcagtacatttaaaggtgaaaattgctaccatacacacgagtaacctcaaaccaccc 29425286  T
Q  460 t 460  Q
    |    
T  29425287 t 29425287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 23509847 - 23509899
Alignment:
Q  396 tatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||| |||||||||| |||||||||| ||||||||| ||||||||||||    
T  23509847 tatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacc 23509899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 346 - 389
Target Start/End: Complemental strand, 24614061 - 24614018
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaag 389  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  24614061 aaagaacaatgttctatttaaattttttaaaagataaatacaag 24614018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 387
Target Start/End: Original strand, 30507120 - 30507162
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaataca 387  Q
    |||||| |||||||||||||| |||||||||||||||||||||    
T  30507120 aaaagaacaatgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 297
Target Start/End: Complemental strand, 980395 - 980360
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctg 297  Q
    |||| |||||||||||||||||||||||||||||||    
T  980395 caggaccgtccctgagaattcggaggctcggctctg 980360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 13460360 - 13460305
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtg 317  Q
    ||||||||||| |||||||||||||||||| |||||  ||| |||||||| |||||    
T  13460360 cagggccgtccttgagaattcggaggctcgactctgggaataaaaagaggtcagtg 13460305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 448
Target Start/End: Complemental strand, 55255307 - 55255275
Alignment:
Q  416 aggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||| ||||||||||||||||||||||    
T  55255307 aggtgaaaatgactaccgtatacatgaggaacc 55255275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 5e-57; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 54619121 - 54619305
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||           |||||||||||||||||    
T  54619121 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaagccaatgataaaatcaaaacata--attttttttaaaagagcaatgttcta 54619218  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  54619219 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 54619305  T

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Target: chr3; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 262 - 446
Target Start/End: Original strand, 38681011 - 38681193
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||           |||||||||||||||||    
T  38681011 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacata--attttttttaaaagagcaatgttcta 38681108  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaa 446  Q
    ||||||||||||||||||||||||||||||||  ||| |||| |||||| | | |||||||||| ||||||||||||||||||||    
T  38681109 tttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaa 38681193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 8073257 - 8073440
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||          ||||||| |||||||||    
T  8073257 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagtaatgttcta 8073353  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||   |||||||| |||||||| ||| |||||||| ||||||||||||||||||||||    
T  8073354 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacc 8073440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 21582960 - 21582775
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| |||          |||||| ||||||| ||    
T  21582960 cagggccgtccctgagaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaacgtat-tttttttttaaaagaacaatgtttta 21582862  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  21582861 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 21582775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 262 - 444
Target Start/End: Original strand, 36715942 - 36716123
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |         |||||||||||||||||    
T  36715942 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaataaaaacata-atttttatttaaaagagcaatgttcta 36716040  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||  || ||||||||| |||||    
T  36716041 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagg 36716123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 27078485 - 27078671
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| |         |||| |||||||||||    
T  27078485 gcagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacata-atttttttttaaaaaagcaatgttct 27078583  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||| ||||  |||||||| |||| ||| | |||||||||| ||||||||||||||||| ||||    
T  27078584 atttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacc 27078671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 27084282 - 27084468
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| |         |||| |||||||||||    
T  27084282 gcagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacata-atttttttttaaaaaagcaatgttct 27084380  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||| ||||  |||||||| |||| ||| | |||||||||| ||||||||||||||||| ||||    
T  27084381 atttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacc 27084468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 50939151 - 50939335
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||          |||| ||||||| |||    
T  50939151 gcagggccgtccctaagaattcgggggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtat---ttttttaaaaaaagcaatgatct 50939247  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||| |||||||  ||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||    
T  50939248 atttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaacc 50939335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 266 - 447
Target Start/End: Complemental strand, 37168551 - 37168372
Alignment:
Q  266 gccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattta 365  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||          |||| | ||||||||||||||    
T  37168551 gccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat--ttttttttaaaaaaacaatgttctattta 37168454  T
Q  366 tattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaac 447  Q
    |||||||||||||||||||| |||||||  ||||||||||||| ||| |||||||||||| |||||||||||||||||||||    
T  37168453 tattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaac 37168372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 47467872 - 47467688
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| | |           ||||||| ||||||||    
T  47467872 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtgtttttttttt--aaagagcgatgttcta 47467775  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| | |||||| | |||||||||| ||||||||||||||||||||||    
T  47467774 tttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacc 47467688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 43207157 - 43207339
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||| |||||||||||||||  ||||||||||||||||||||||| | ||||| |||          |||||||||||||||||    
T  43207157 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacgtat---tttttttaaaagagcaatgttcta 43207253  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||| | |||||||||||| ||||||||||||||||||||||    
T  43207254 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatc-aaaggtgaaaatgactaccgtatacatgaggaacc 43207339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 263 - 448
Target Start/End: Original strand, 3953816 - 3953998
Alignment:
Q  263 agggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctat 362  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||| ||||  |||          |||||| |||||||||||    
T  3953816 agggccgtccctgagaattcggaggttccgctctggaaatgaaaagaggccagtgataaaattaaaatgtat---tttttttaaaagaacaatgttctat 3953912  T
Q  363 ttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||| |  |||||||||||||||||||    
T  3953913 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacc 3953998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 42098989 - 42098805
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||| |||||| |||| | |||||||||||||||||||||||||||||||  | |          |||||||| ||||||||    
T  42098989 cagggccgtccctgagaattcgaaggctcagctcgggaaatgaaaagaggccagtgataaaatcaaaa--tgtctttttttttaaaagagcgatgttcta 42098892  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||| ||  | |||||||||| ||||||||||||||||||||||    
T  42098891 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacc 42098805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 34290554 - 34290738
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| | ||||||||||||||||||||||  |||||||||| | |||||||||||||||||| |||          |||| | ||||||||||    
T  34290554 cagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaagtcagtgataaaatcaaaacgtat--ttttttttaaaaaaacaatgttcta 34290651  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||| |||||||||||| ||||||||||| ||||||||||    
T  34290652 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacc 34290738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 266 - 448
Target Start/End: Complemental strand, 44708660 - 44708481
Alignment:
Q  266 gccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattta 365  Q
    ||||||||| |||||||||||||||  |||||  ||||||||||||||||||||||||||||||| |||          |||| || |||||||||||||    
T  44708660 gccgtccctaagaattcggaggctcaactctgggaatgaaaagaggccagtgataaaatcaaaacgtat---ttttttaaaaaaagaaatgttctattta 44708564  T
Q  366 tattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||| |||||||  |||||||  |||||||| |||||||||||| ||||||||||||||||||||||    
T  44708563 tattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 44708481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 53506802 - 53506986
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| | |||||||| |||||||||||||  |||||| ||||||||||||||||||||||||||||          |||| | ||||||||||    
T  53506802 cagggccgtcc-taagaattcgaaggctcggctctgggaatgaagagaggccagtgataaaatcaaaacatattttttttttaaaaaaa-caatgttcta 53506899  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||| |  |||||||| |||||||| |||||||||||| ||||||||||||||||| ||||    
T  53506900 tttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacc 53506986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 265 - 444
Target Start/End: Complemental strand, 36606149 - 36605973
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||          || |||||||||||||||||    
T  36606149 ggccgtccctgaaaattcggaggttcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaatagagcaatgttctattt 36606053  T
Q  365 atattttttaaaa-gataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    ||||||||||||| ||||||||||||||||  |||||||| |||||||| | || ||||||| ||||||||||||||||||    
T  36606052 atattttttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 261 - 440
Target Start/End: Original strand, 54407072 - 54407252
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagag-caatgttc 359  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||||||| | |          |||| |  ||||||||    
T  54407072 gcagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtttttttttttaaaaaaaaaacaatgttc 54407171  T
Q  360 tatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacat 440  Q
    |||||||||||||||||||||||||| |||||||  |||||||| |||||| | |||||||||||| ||||||||||||||    
T  54407172 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat 54407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 265 - 448
Target Start/End: Original strand, 53149235 - 53149416
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    ||||||| |||||||||||||||||| | || |  ||||||||||| ||||||||||||||||||| | |          |||||||| |||||||||||    
T  53149235 ggccgtctctgagaattcggaggctcagttcggggaatgaaaagagaccagtgataaaatcaaaacgttt--ttttttttaaaagagcgatgttctattt 53149332  T
Q  365 atattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||  | || | ||||| ||||||||||||||||||||||    
T  53149333 atattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacc 53149416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 345 - 448
Target Start/End: Original strand, 9878686 - 9878789
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||||||||| |||| ||||||||| |||    
T  9878686 aaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacataagg 9878785  T
Q  445 aacc 448  Q
    ||||    
T  9878786 aacc 9878789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 353 - 458
Target Start/End: Complemental strand, 8420425 - 8420320
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    ||||||||||||| |||||||||||||||||||||||||||  ||||||||| ||||||| ||| |||||||||||| ||||||| | ||||||||||||    
T  8420425 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaacctcaa 8420326  T
Q  453 accacc 458  Q
    ||||||    
T  8420325 accacc 8420320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 261 - 448
Target Start/End: Original strand, 50258541 - 50258726
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||| ||||||||||||||||||||||||||  || ||||||||  ||||||||||||||||||||||          |||||||| |||||||    
T  50258541 gcagggccgttcctgagaattcggaggctcggctctgggaacgaaaagagatcagtgataaaatcaaaacatat---ttttttaaaaagagcgatgttct 50258637  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtaca-cctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||| ||||||||||||||   |||||||| |||||| ||  | ||||||||| ||||  |||| |||||||||||    
T  50258638 atttatattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacccggagggtgaaaatgactattgtatgcatgaggaacc 50258726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 274 - 446
Target Start/End: Complemental strand, 18372658 - 18372485
Alignment:
Q  274 tgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatatttttt 373  Q
    |||||||||||||||||| | |||  |||||||||||| |||||||||||||||||| |||          |||||||||||||||||||||||||||||    
T  18372658 tgagaattcggaggctcgacactgggaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttctatttatatttttt 18372562  T
Q  374 aaaagataaatacaaggtgcaatatatat----gtggtacacctaaaggtgaaaatcactaccgtatacatgaggaa 446  Q
    |||||||||||||||||||   |||||||    | |||||||  | |||||||||| ||||||||||||||||||||    
T  18372561 aaaagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaa 18372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 346 - 458
Target Start/End: Complemental strand, 790042 - 789930
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| |||| ||||||||| ||||||||||  ||||||||||||||  |||||||||| ||||||| |||||| |||||||| ||| ||||||||||||    
T  790042 aaagaacaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgagga 789943  T
Q  446 acctcaaaccacc 458  Q
    |||||||||||||    
T  789942 acctcaaaccacc 789930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 54574826 - 54574941
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||| |||| ||||||||||||| |  |||||||| |||||||| ||| || |||||||||||| |||||||||||    
T  54574826 aaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgagg 54574925  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||||||| ||||    
T  54574926 aacctcaaaccgccct 54574941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 346 - 460
Target Start/End: Complemental strand, 25855527 - 25855414
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||   ||||||||| || |||| |||| ||||||||||||||||||||| || ||    
T  25855527 aaagaacaatgttctatttaaattttttaaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaaga 25855429  T
Q  446 acctcaaaccaccct 460  Q
    |||||||||||||||    
T  25855428 acctcaaaccaccct 25855414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 460
Target Start/End: Complemental strand, 42453511 - 42453403
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||| ||||| ||||||||||||||||||||||||||  ||||||||| | |||||||||||||||       || |||||||||||||    
T  42453511 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga-------tagcgtatacatgagg 42453419  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||||||||||||    
T  42453418 aacctcaaaccaccct 42453403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 345 - 460
Target Start/End: Complemental strand, 26279649 - 26279532
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcact--accgtatacatga 442  Q
    |||||| |||||||||||||| ||||||||||||||||||| ||||||   ||||||||   |||||| |||| |||||||||||  ||  |||||||||    
T  26279649 aaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactacacattatacatga 26279550  T
Q  443 ggaacctcaaaccaccct 460  Q
    ||||||||||||||||||    
T  26279549 ggaacctcaaaccaccct 26279532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 353 - 454
Target Start/End: Original strand, 32319162 - 32319263
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    ||||||||||||| |||||||||||||||||||||| |||   |||||||| |||||||| |||||||||||| |||| | |||| | ||||||||||||    
T  32319162 aatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaacctcaa 32319261  T
Q  453 ac 454  Q
    ||    
T  32319262 ac 32319263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 346 - 458
Target Start/End: Complemental strand, 49393195 - 49393085
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||| |   ||||||||| ||||||| |||||| ||||| |||||||||||||||| ||    
T  49393195 aaagaacaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatgt-gtacacccaaaggtaaaaattactaccgtatacatga-ga 49393098  T
Q  446 acctcaaaccacc 458  Q
    |||||||| ||||    
T  49393097 acctcaaatcacc 49393085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 460
Target Start/End: Original strand, 28689368 - 28689475
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    ||||||||||||| |||||  ||||||||||||||||||||  |||||||| | || | | |||||||||||||||| ||||||||||||| || |||||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgagaaatctcaa 28689467  T
Q  453 accaccct 460  Q
    || |||||    
T  28689468 actaccct 28689475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 29620364 - 29620426
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaat 324  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  29620364 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaat 29620426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 268 - 448
Target Start/End: Complemental strand, 48157310 - 48157143
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttata 367  Q
    ||||||| ||||||||||||||||| || |  ||| |||||||||||||||||||||||||||| ||          ||||  |||||| ||||||||||    
T  48157310 cgtccctaagaattcggaggctcggttccgggaataaaaagaggccagtgataaaatcaaaacacat---ttttaaaaaaaatgcaatgatctatttata 48157214  T
Q  368 ttttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||| ||||||          | |||||||| |||||||||||| ||||| ||||||||||||||||    
T  48157213 ttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactactgtatacatgaggaacc 48157143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 458
Target Start/End: Complemental strand, 52374763 - 52374650
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||   | |||||||||| |||   |||| ||| | |||| ||||||| ||||||||||||||||||||||| |    
T  52374763 aaaagaacaatgttctatttaaatttttttttaaataaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaag 52374664  T
Q  445 aacctcaaaccacc 458  Q
    ||||||| ||||||    
T  52374663 aacctcataccacc 52374650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 330
Target Start/End: Original strand, 48720429 - 48720497
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 330  Q
    ||||||||||||| |||||| |||||||||||||||  ||||||||||||  |||||||||||||||||    
T  48720429 cagggccgtccctaagaattgggaggctcggctctgggaatgaaaagaggtaagtgataaaatcaaaac 48720497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 456
Target Start/End: Complemental strand, 29598179 - 29598103
Alignment:
Q  379 ataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaacca 456  Q
    ||||||||||||| |  |||||||||| |||||  |||| ||||| |||||||||||||||||||||| |||||||||    
T  29598179 ataaatacaaggttccgtatatatgtgatacactcaaagatgaaa-tcactaccgtatacatgaggaatctcaaacca 29598103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 381 - 448
Target Start/End: Original strand, 29620423 - 29620490
Alignment:
Q  381 aaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||  |||||||| |||| | | | |||||||||| ||||||||||||||||||||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacc 29620490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 357 - 410
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  357 ttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtaca 410  Q
    |||||||||||||||||||||||||||||||| |||   |||||||| ||||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 1e-54; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 44655936 - 44655753
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||           |||||||||||||||||    
T  44655936 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagagaccagtgataaaatcaaaacata---atttttttaaaagagcaatgttcta 44655840  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||   |||||||| |||||||| | |||| ||||| ||||||||||||||||||||||    
T  44655839 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacc 44655753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 261 - 450
Target Start/End: Complemental strand, 6771990 - 6771801
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |           ||||||| |||||||    
T  6771990 gcagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtgttttttttttttaaagagcgatgttct 6771891  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctc 450  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||| ||||||||||||| ||||||||||    
T  6771890 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctc 6771801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 261 - 448
Target Start/End: Complemental strand, 14146496 - 14146312
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||          |||||||| |||||||    
T  14146496 gcagggccgtccctgagaattcggaggctcggctcttggaatgaaaagaggccagtgataaaatcaaaacgtat---tttttttaaaagagcgatgttct 14146400  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||||||  |||||||| |||||||| | || ||||||| ||||||||||||||||||||||    
T  14146399 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 14146312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 265 - 450
Target Start/End: Complemental strand, 50881621 - 50881440
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||  |||          ||||||||||||||||||||    
T  50881621 ggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaattaaaatctat----ttttttaaaagagcaatgttctattt 50881526  T
Q  365 atattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctc 450  Q
    ||||||||||||||||||||||||||||   |||||||| |||||| ||| |||||||||| ||||| ||||||||||||||||||    
T  50881525 atattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctc 50881440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 5027746 - 5027561
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||| |||          |||||||||||||||||    
T  5027746 cagggccgtccctgagaattcggaggctcgactcggggaatgaaaagaggccagtgataaaatcaaaacgtat-tttttttttaaaagagcaatgttcta 5027648  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||| |||||| |||| ||||||||||    
T  5027647 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacc 5027561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 17169151 - 17168968
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||          |||| ||||||||||||    
T  17169151 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtat---ttttttaaaaaaagcaatgttcta 17169055  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||||   |||||||| |||||||| |||||||||||| |||||| |||||||||||||||    
T  17169054 tttatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacc 17168968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 23185622 - 23185439
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||| ||||||||||||||||||||||||    | ||||||||||||||||||||||||||||| |||          |||||||||||||||||    
T  23185622 cagggccgttcctgagaattcggaggctcggctcgaggattgaaaagaggccagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 23185526  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  23185525 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacc 23185439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 268 - 446
Target Start/End: Complemental strand, 16140244 - 16140069
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttata 367  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| |||          |||||||  ||||||||||||||    
T  16140244 cgtccctgagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtat---tttttttaaaagagtgatgttctatttata 16140148  T
Q  368 ttttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaa 446  Q
    |||||||||||||||||||||||||   |||||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  16140147 ttttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaa 16140069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 262 - 439
Target Start/End: Original strand, 21740852 - 21741029
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||          |||||||||||||||||    
T  21740852 cagggccgtccttgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaatgtatttttttttttaaaagagcaatgttcta 21740951  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtataca 439  Q
    ||| ||||||||||||||||||||||||||||  |||||||| | |||||| | |||||||||| |||||| ||||||    
T  21740952 tttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 5316875 - 5316692
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||||||||||||| ||||||||| |  |   |||||||||||| |||||||||||||||||| |||          |||||||||||||||||    
T  5316875 cagggccgtccctgagaatttggaggctcgaccttaggaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagcaatgttcta 5316779  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||| | |||||||||| ||||||||||||||||||||||    
T  5316778 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacc 5316692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 261 - 393
Target Start/End: Original strand, 27906645 - 27906775
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||         |||||||||||||||     
T  27906645 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac--ataattttttttaaaagagcaatgttcc 27906742  T
Q  361 atttatattttttaaaagataaatacaaggtgc 393  Q
    |||||||||||||||||||||||||||||||||    
T  27906743 atttatattttttaaaagataaatacaaggtgc 27906775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 4971536 - 4971719
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||| |||||||||||||| ||||||||| || |  ||||||||||| |||||||||||||||||||||||           ||||||||||||||||    
T  4971536 cagggctgtccctgagaattctgaggctcggttcggggaatgaaaagagaccagtgataaaatcaaaacatattttttttt---aaagagcaatgttcta 4971632  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||||||||| |  |||||||| |||||||| | | |||||||| ||||||||||||||||||||||    
T  4971633 tttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgaggaacc 4971719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 19955912 - 19955729
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||           ||| ||||||| ||||    
T  19955912 cagggctgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgaattttttttt---aaaaagcaatgatcta 19955816  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||| |  |||||||| |||||||| |||||||||||| ||||||||||| ||||||||||    
T  19955815 tttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacc 19955729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 262 - 450
Target Start/End: Original strand, 40501707 - 40501893
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||||||||||||| |||||| |||||||||||| |||||||||||||||||| |||          |||| || |||| ||||    
T  40501707 cagggccgtccctaagaattcggaggctcgactctgagaatgaaaagaggtcagtgataaaatcaaaacgtat--tttttaaaaaaaaagtaatgatcta 40501804  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctc 450  Q
    |||||||||||||||||||||||| ||||||   |||||||| |||||||| |||||| ||||| |||||||||||||||| |||||||    
T  40501805 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctc 40501893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 346 - 460
Target Start/End: Original strand, 38547035 - 38547149
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||| | ||||||||||||    
T  38547035 aaagatcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgagga 38547134  T
Q  446 acctcaaaccaccct 460  Q
    |||||||||||||||    
T  38547135 acctcaaaccaccct 38547149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 9172940 - 9173124
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||| | ||||  |||          ||||   ||||||||||    
T  9172940 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaa--caatgttcta 9173037  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||| | |||||||||||| ||||||||||||||||||||||    
T  9173038 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 9173124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 9180922 - 9181106
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||||||||| |||||||| | ||||  |||          ||||   ||||||||||    
T  9180922 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaattaaaaatgtatttttgttttaaaaaa--caatgttcta 9181019  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||| | |||||||||||| ||||||||||||||||||||||    
T  9181020 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacc 9181106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 261 - 425
Target Start/End: Original strand, 22865377 - 22865538
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||||| || ||||||||||||||| |||          ||||||||||||||||    
T  22865377 gcagggccgtccctgagaattcggaggcacggctctgggaatgaaaagaggtcaatgataaaatcaaaacgtat--tttttttcaaaagagcaatgttct 22865474  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaat 425  Q
    ||||||||||||||||||||||||||||| |||  |||||||  |||||||| ||||||||||||    
T  22865475 atttatattttttaaaagataaatacaagatgctctatatat-cggtacacccaaaggtgaaaat 22865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 1366797 - 1366979
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||||||| ||  ||||| |||||||| ||||||  ||||||||||||||||||||||| | |||||||||            |||||||||||||||    
T  1366797 cagggccgtctctacgaatttggaggctcagctctgggaatgaaaagaggccagtgataaattgaaaacatattttttttt----aagagcaatgttcta 1366892  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| |||||||  |||||||| |||||||| |||| ||||||| ||||||||||||| ||||||||    
T  1366893 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacc 1366979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 265 - 448
Target Start/End: Original strand, 13913401 - 13913583
Alignment:
Q  265 ggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctattt 364  Q
    |||||||||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||  |||          |||| ||||||| |||||||    
T  13913401 ggccgtccctaagaattcggaggcttggctctgagaatgaaaagatgccagtgataaaatcaaaatgtat---tttttttaaaaaagcaatgatctattt 13913497  T
Q  365 atattttttaaaagataaatacaaggtgcaa--tatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||| ||| |||    |||||||| |||||||||||| |||||||| ||||||||||||||||| ||||    
T  13913498 atattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacc 13913583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 345 - 458
Target Start/End: Complemental strand, 45758609 - 45758496
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||||||||||||||||| |||||||   |||||||||  |||| | |||||||||||||||||||||||||||||||    
T  45758609 aaaagaacaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgagg 45758510  T
Q  445 aacctcaaaccacc 458  Q
    ||||||||||||||    
T  45758509 aacctcaaaccacc 45758496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 261 - 447
Target Start/End: Original strand, 51607357 - 51607540
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    ||||| |||||||| | ||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||          |||| |  |||||| |    
T  51607357 gcaggaccgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtat----ttttttaaaaaaaaaatgtttt 51607452  T
Q  361 atttatattttttaaaagataaatacaaggtg-caatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaac 447  Q
    ||||||||||||||||||||||||| |||||| |  |||||||| |||||||| ||| |||||||| |||||||||||||||||||||    
T  51607453 atttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaac 51607540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 3406614 - 3406430
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||| ||||||||||||| |||||||| |||| |  |||||||||||| |||||||||||| ||||| | |          |||||||| ||||||||    
T  3406614 cagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgttt--ttttttttaaaagagcgatgttcta 3406517  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  ||||||||  ||||||    |||||||||| ||||||||||||||||||||||    
T  3406516 tttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacc 3406430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 262 - 448
Target Start/End: Original strand, 3440206 - 3440390
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    |||||| ||||||||||||| |||||||| |||| |  |||||||||||| |||||||||||| ||||| | |          |||||||| ||||||||    
T  3440206 cagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgttt--ttttttttaaaagagcgatgttcta 3440303  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||||||  ||||||||  ||||||    |||||||||| ||||||||||||||||||||||    
T  3440304 tttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacc 3440390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 27559752 - 27559649
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  27559752 aaaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 27559653  T
Q  445 aacc 448  Q
    ||||    
T  27559652 aacc 27559649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 262 - 425
Target Start/End: Complemental strand, 6889805 - 6889646
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| ||| ||||||||||||||| ||||| |||||||||||| |||||||||||||||||| |||          |||||||||||||||||    
T  6889805 cagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgtat----ttttttaaaagagcaatgttcta 6889710  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaat 425  Q
    ||||||||||||||||||||||||||| ||    |||||||| |||||| | | ||||||||||    
T  6889709 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaat 6889646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 262 - 425
Target Start/End: Complemental strand, 6891651 - 6891492
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||| ||| ||||||||||||||| ||||| |||||||||||| |||||||||||||||||| |||          |||||||||||||||||    
T  6891651 cagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgtat----ttttttaaaagagcaatgttcta 6891556  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaat 425  Q
    ||||||||||||||||||||||||||| ||    |||||||| |||||| | | ||||||||||    
T  6891555 tttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaat 6891492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 39134720 - 39134836
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaa-gataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgag 443  Q
    |||||| |||||||||||||| ||||||||||| ||||||||||||||||  ||||||||   |||||| |||||||| ||||||||| |||||||||||    
T  39134720 aaaagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgag 39134819  T
Q  444 gaacctcaaaccaccct 460  Q
    |||||||||||||||||    
T  39134820 gaacctcaaaccaccct 39134836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 279 - 448
Target Start/End: Original strand, 41697072 - 41697238
Alignment:
Q  279 attcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaaag 378  Q
    ||||||| |||||||||||  |||||||||||| |||||||||||||||||| |||          |||||||| |||||||||||||||||||||||||    
T  41697072 attcggaagctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagcgatgttctatttatattttttaaaag 41697168  T
Q  379 ataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||| ||    ||||||||  ||||| | | | |||||||| ||||||||||||||||||||||    
T  41697169 ataaatacaaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacc 41697238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 345 - 456
Target Start/End: Complemental strand, 38853637 - 38853527
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| || ||||||||||| |||||||||| |||||||||||||||   ||||||||| ||| | | ||||||||||||||||||||||||||||| |    
T  38853637 aaaagaacagtgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatga-g 38853539  T
Q  445 aacctcaaacca 456  Q
    ||||||||||||    
T  38853538 aacctcaaacca 38853527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 345 - 458
Target Start/End: Complemental strand, 5533428 - 5533314
Alignment:
Q  345 aaaagagcaatgttctatttatatttttt-aaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgag 443  Q
    |||||| |||| ||||||||| ||||||| |||||||||| |||||||||  ||||||||  |||||   ||||||||||||||||||||||||||||||    
T  5533428 aaaagaacaatattctatttaaatttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgag 5533329  T
Q  444 gaacctcaaaccacc 458  Q
    ||| |||||||||||    
T  5533328 gaaactcaaaccacc 5533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 346 - 460
Target Start/End: Complemental strand, 26804059 - 26803948
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| ||||| | |||||| ||||||||||||||||||||||| ||   |||||||| | |||||   ||||||||||||||||||||||||||||| |    
T  26804059 aaagaacaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaa 26803963  T
Q  446 acctcaaaccaccct 460  Q
    |||||||||||||||    
T  26803962 acctcaaaccaccct 26803948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 33170867 - 33170759
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    ||||||| |||||| |||||||||||  ||||||||| |||   |||||||| |||||||| || ||||||||||||||||||||||||||| ||||| |    
T  33170867 caatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaacctta 33170768  T
Q  452 aaccaccct 460  Q
    |||||||||    
T  33170767 aaccaccct 33170759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 353 - 458
Target Start/End: Original strand, 43235774 - 43235881
Alignment:
Q  353 aatgttctatttatatttttta--aaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctc 450  Q
    ||||||||||||| |||||||   ||||||||||||||| ||   ||||||||  ||||||| ||||||||||||||||| |||||||||||||||||||    
T  43235774 aatgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacctc 43235873  T
Q  451 aaaccacc 458  Q
    ||||||||    
T  43235874 aaaccacc 43235881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 346 - 460
Target Start/End: Complemental strand, 6221791 - 6221678
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| |||||||||||||| |||||| ||||||||||||||| ||||  |||||| | |||||| | ||| |||||||||| || |||||| |||||||    
T  6221791 aaagaacaatgttctatttaaattttt-aaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgagga 6221693  T
Q  446 acctcaaaccaccct 460  Q
    |||||||||||||||    
T  6221692 acctcaaaccaccct 6221678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 277 - 449
Target Start/End: Complemental strand, 50146476 - 50146307
Alignment:
Q  277 gaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaa 376  Q
    ||||||||||||||||||||| |||||||| ||| ||  ||||||||| |||| || ||         |||||| |||||||||||||| | ||||| ||    
T  50146476 gaattcggaggctcggctctgtaaatgaaacgagacccatgataaaat-aaaaaatgta--cttttttaaaagaacaatgttctatttaaactttttgaa 50146380  T
Q  377 agataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacct 449  Q
    |||||||| ||||||||  | |||||||| || ||| |||||| ||||||| |||| ||||||||||||||||    
T  50146379 agataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgaggaacct 50146307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 34247216 - 34247154
Alignment:
Q  268 cgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaac 330  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  34247216 cgtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaac 34247154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 10925951 - 10926067
Alignment:
Q  345 aaaagagcaatgttctatttatat-tttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgag 443  Q
    |||||| |||| |||||||||  | ||||||||| |||||||||| ||||  |||||||| | | || | |||| |||||||||||||||||||||||||    
T  10925951 aaaagaacaatattctatttaagtatttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgag 10926050  T
Q  444 gaacctcaaaccaccct 460  Q
    || ||||||| ||||||    
T  10926051 gatcctcaaatcaccct 10926067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 278 - 448
Target Start/End: Complemental strand, 44895827 - 44895664
Alignment:
Q  278 aattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttctatttatattttttaaaa 377  Q
    |||||||||| |||| ||||  |||||||||||| | |||| |||||||||||||||          |||| | ||||| ||||||||||||||||||||    
T  44895827 aattcggaggttcggttctgggaatgaaaagaggtcggtgaaaaaatcaaaacatattttttttttaaaaaaa-caatgatctatttatattttttaaaa 44895729  T
Q  378 gataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||| ||||||          |||||||||| |||||||||||| | ||||||||||||||||||||    
T  44895728 gataaatataaggtggcgg------gtggtacacccaaaggtgaaaatgattaccgtatacatgaggaacc 44895664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 435
Target Start/End: Complemental strand, 35392376 - 35392295
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgta 435  Q
    |||||| |||||| |||||||||  ||||||||||||||||  |||||||| |||| | | ||||||||||||||||||||||    
T  35392376 aatgttttatttaaattttttaag-gataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 345 - 388
Target Start/End: Original strand, 17322621 - 17322664
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaa 388  Q
    |||||| |||||||||||||||||||||| ||||||||||||||    
T  17322621 aaaagaacaatgttctatttatatttttttaaagataaatacaa 17322664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 297
Target Start/End: Original strand, 52127460 - 52127495
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctg 297  Q
    |||| |||||||||||||||||||||||||||||||    
T  52127460 caggaccgtccctgagaattcggaggctcggctctg 52127495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 416 - 448
Target Start/End: Original strand, 27906786 - 27906818
Alignment:
Q  416 aggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||| ||||||||||||||||||||||    
T  27906786 aggtgaaaatgactaccgtatacatgaggaacc 27906818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 261 - 448
Target Start/End: Complemental strand, 1528 - 1344
Alignment:
Q  261 gcagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttct 360  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||| |||          ||||||||| ||||||    
T  1528 gcagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtat---tttttttaaaagagcactgttct 1432  T
Q  361 atttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||||||||||||||||||||||||||| |||  |||||||| |||||||| | || ||||||| ||||||||||||||||||||||    
T  1431 atttatattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacc 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 262 - 448
Target Start/End: Complemental strand, 106723 - 106539
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||| |||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |||          |||||| ||||||||||    
T  106723 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtat--ttttttttaaaagaacaatgttcta 106626  T
Q  362 tttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    |||||||||||||||||||||||| ||||||   |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  106625 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacc 106539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 257 - 372
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||   |||||||| |||||||| ||| ||||||||||||||||||||||||| |    
T  257 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatg 356  T
Q  445 aacctcaaaccaccct 460  Q
    ||||||||||||||||    
T  357 aacctcaaaccaccct 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 353 - 454
Target Start/End: Original strand, 206496 - 206597
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    ||||||||||||| ||||| ||||||||||||||||||||   |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||    
T  206496 aatgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacctcaa 206595  T
Q  453 ac 454  Q
    ||    
T  206596 ac 206597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 352 - 460
Target Start/End: Complemental strand, 39022 - 38914
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    |||||||||||||| ||||||||||||||||||||||||||   |||||||| | |||||  ||| |||||||||||||||||||| |||||||||||||    
T  39022 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacctca 38923  T
Q  452 aaccaccct 460  Q
    |||||||||    
T  38922 aaccaccct 38914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 352 - 456
Target Start/End: Original strand, 173516 - 173620
Alignment:
Q  352 caatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctca 451  Q
    |||||||||||||| ||||||||||||||||||||||||| |  |||||||| | |||||| |||||| |||||||||||||||||| ||||||||||||    
T  173516 caatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacctca 173615  T
Q  452 aacca 456  Q
    |||||    
T  173616 aacca 173620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 346 - 460
Target Start/End: Original strand, 23993 - 24107
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagga 445  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||   |||||||| |||||||| ||| |||||||||| |||||||| ||| ||||    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataagga 24092  T
Q  446 acctcaaaccaccct 460  Q
    | |||||||||||||    
T  24093 atctcaaaccaccct 24107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 353 - 457
Target Start/End: Complemental strand, 1450 - 1346
Alignment:
Q  353 aatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaa 452  Q
    ||||||||||||| | ||||||||||||||||| |||||||  ||||||||   |||||| ||| ||||||||||||| |||||||||||||||||||||    
T  1450 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacctcaa 1351  T
Q  453 accac 457  Q
    |||||    
T  1350 accac 1346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 345 - 458
Target Start/End: Complemental strand, 40191 - 40076
Alignment:
Q  345 aaaagagcaatgttctattta--tattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatga 442  Q
    |||||| ||||||||||||||  | ||||||||||||||||||||||||||  ||| ||||| |||||||  |||||||||||||| | |||||||||||    
T  40191 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatga 40092  T
Q  443 ggaacctcaaaccacc 458  Q
    | ||||||||||||||    
T  40091 gcaacctcaaaccacc 40076  T

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Target: scaffold0022; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 345 - 458
Target Start/End: Complemental strand, 138251 - 138136
Alignment:
Q  345 aaaagagcaatgttctattta--tattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatga 442  Q
    |||||| ||||||||||||||  | ||||||||||||||||||||||||||  ||| ||||| |||||||  |||||||||||||| | |||||||||||    
T  138251 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatga 138152  T
Q  443 ggaacctcaaaccacc 458  Q
    | ||||||||||||||    
T  138151 gcaacctcaaaccacc 138136  T

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Target: scaffold0007 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 345 - 460
Target Start/End: Original strand, 230858 - 230973
Alignment:
Q  345 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgagg 444  Q
    |||||| |||||||||||||| |||| |||||||||||||  ||||||   |||||||| | || ||| ||||||||||||||||||| |||||||||||    
T  230858 aaaagaacaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgagg 230957  T
Q  445 aacctcaaaccaccct 460  Q
    ||| ||||||||||||    
T  230958 aacttcaaaccaccct 230973  T

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Target: scaffold0001 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 388
Target Start/End: Complemental strand, 183244 - 183121
Alignment:
Q  262 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacatatannnnnnnnnaaaagagcaatgttcta 361  Q
    ||||||||||||||| ||||| ||||||||||||||  ||||||||||||||||||||||||| ||||| |||          |||||||  ||||||||    
T  183244 cagggccgtccctgaaaattcagaggctcggctctgggaatgaaaagaggccagtgataaaattaaaacgtat---tttttttaaaagagagatgttcta 183148  T
Q  362 tttatattttttaaaagataaatacaa 388  Q
    |||||||||||||||||||||||||||    
T  183147 tttatattttttaaaagataaatacaa 183121  T

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Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 181969 - 181920
Alignment:
Q  399 atatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacc 448  Q
    ||||| |||||| | | |||||||||| ||||||||||||||||||||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaacc 181920  T

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Target: scaffold0003 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 372 - 457
Target Start/End: Original strand, 351360 - 351445
Alignment:
Q  372 ttaaaagataaatacaaggtgcaatatatatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccac 457  Q
    |||||||||||||||||||||   ||||||||| ||||||| ||||||||||||| |||| | ||||| |||| ||||||||||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaatcgctactgaatacacgaggtacctcaaaccac 351445  T

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Target: scaffold0227 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 400 - 460
Target Start/End: Complemental strand, 16076 - 16016
Alignment:
Q  400 tatgtggtacacctaaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccct 460  Q
    |||| |||||| | |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  16076 tatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacctcaaaccaccct 16016  T

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Target: scaffold0227; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 16168 - 16123
Alignment:
Q  346 aaagagcaatgttctatttatattttttaaaagataaatacaaggt 391  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||    
T  16168 aaagagaaatgttctatttaaattttttaaaagataaatacaaggt 16123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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